| Contig-U13940-1 |
| Contig ID |
Contig-U13940-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
1595 |
| Chromosome number (1..6, M) |
6 |
| Chromosome length |
3595308 |
| Start point |
1869668 |
| End point |
1868090 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
3 |
| Number of EST |
4 |
| Link to clone list |
U13940 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.12.16 |
| Homology vs DNA |
Query= Contig-U13940-1 (Contig-U13940-1Q) /CSM_Contig/Contig-U13940-1Q.Seq.d
(1595 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ351236) Dictyostelium discoideum cDNA clone:dda42c13, 3' ... 1279 0.0 2
(BJ376410) Dictyostelium discoideum cDNA clone:ddc28m08, 3' ... 1233 0.0 2
(BJ363769) Dictyostelium discoideum cDNA clone:ddc28m08, 5' ... 448 0.0 4
(BJ326442) Dictyostelium discoideum cDNA clone:dda16b17, 5' ... 369 0.0 3
(C91572) Dictyostelium discoideum slug cDNA, clone SSK460. 50 3e-07 2
(EV275250) GLMCF64TF JCVI-SOY2 Glycine max cDNA 5', mRNA seq... 40 0.001 3
(FK451471) 454GmaGlobSeed186103 Soybean Seeds Containing Glo... 40 0.029 2
(AM628627) Entamoeba dispar GSS, clone dispar2d03.q1k. 52 0.030 2
(AZ685369) ENTIN58TF Entamoeba histolytica Sheared DNA Entam... 40 0.052 2
(AZ675554) ENTGX10TR Entamoeba histolytica Sheared DNA Entam... 40 0.052 2
(AZ690910) ENTIS94TF Entamoeba histolytica Sheared DNA Entam... 40 0.052 2
(AZ544972) ENTDA19TR Entamoeba histolytica Sheared DNA Entam... 40 0.052 2
(AM633769) Entamoeba dispar GSS, clone dispar108d06.p1k. 52 0.066 1
(BF324103) su22g02.y1 Gm-c1068 Glycine max cDNA clone GENOME... 40 0.066 2
(BI894120) sai60d11.y1 Gm-c1068 Glycine max cDNA clone GENOM... 40 0.074 2
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 40 0.087 16
(FK016517) GLNCC96TF JCVI-SOY3 Glycine max cDNA 5', mRNA seq... 40 0.092 2
(CO979316) GM89004B1F06.r1 Gm-r1089 Glycine max cDNA clone G... 40 0.094 2
(DQ321761) Trichomonas vaginalis PDS5-like protein gene, com... 50 0.26 1
(AG772312) Macaca fuscata fuscata DNA, clone: MSB2-248G19_R,... 50 0.26 1
(CJ493196) Macaca fascicularis mRNA, clone: QtsA-21256, 5' e... 40 0.41 2
(BJ411696) Dictyostelium discoideum cDNA clone:ddv5n09, 5' e... 32 0.43 3
(AC118537) Felis catus clone RP86-269D22, WORKING DRAFT SEQU... 48 1.0 1
(EJ567310) 1092959730375 Global-Ocean-Sampling_GS-29-01-01-1... 48 1.0 1
(EJ539442) 1092955351130 Global-Ocean-Sampling_GS-29-01-01-1... 48 1.0 1
(EJ235892) 1092405945196 Global-Ocean-Sampling_GS-27-01-01-1... 48 1.0 1
(DY373171) ZO__Ef0007E15.f ZO__Ef Zingiber officinale cDNA c... 48 1.0 1
(DY373098) ZO__Ef0007C13.r ZO__Ef Zingiber officinale cDNA c... 48 1.0 1
(DW181104) SGP307047 Atlantic salmon Heart II cDNA library S... 48 1.0 1
(AU060705) Dictyostelium discoideum slug cDNA, clone SLB178. 44 1.1 2
(CJ462641) Macaca fascicularis mRNA, clone: QnpA-10182, 5' e... 38 1.4 2
(CJ468156) Macaca fascicularis mRNA, clone: QnpA-17974, 5' e... 38 1.4 2
(CJ447616) Macaca fascicularis mRNA, clone: QflA-12955, 5' e... 38 1.5 2
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 38 2.0 14
(AC171831) Bos taurus clone CH240-412K17, WORKING DRAFT SEQU... 36 2.0 2
(BJ363335) Dictyostelium discoideum cDNA clone:ddc26j06, 5' ... 34 2.3 3
(FE240692) CAPG5973.rev CAPG Naegleria gruberi amoeba stage ... 36 2.7 2
(DT841445) LB00459.CR_K06 GC_BGC-04 Bos taurus cDNA clone IM... 36 2.7 2
(DT842391) LB00464.CR_B08 GC_BGC-04 Bos taurus cDNA clone IM... 36 2.7 2
(FE240693) CAPG5973.fwd CAPG Naegleria gruberi amoeba stage ... 36 2.7 2
(CU131471) Equus caballus GSS, BAC clone CH241-251G2, T7 end... 36 2.8 2
(CV868381) PDUts1054C10 Porcine testis cDNA library I Sus sc... 36 2.8 2
(CU144114) Equus caballus GSS, BAC clone CH241-267J5, SP6 en... 36 2.8 2
(EV887167) rcad17b_k7.y1 cag Sus scrofa cDNA 5', mRNA sequence. 36 2.8 2
(AJ746680) Sus scrofa EST from subtracted macrophage librari... 36 2.8 2
(AJ746701) Sus scrofa EST from subtracted macrophage librari... 36 2.8 2
(AJ944445) Sus scrofa EST, clone C0007308i03, 5' direction. 36 2.9 2
(CI031440) Oryza sativa Japonica Group cDNA, clone: 009-M087... 36 3.5 2
(ED083687) AUAC-aaq48e01.g1 Ascaris suum whole genome shotgu... 32 3.8 3
(AL663097) Mouse DNA sequence from clone RP23-75I15 on chrom... 46 4.1 1
(AC122312) Mus musculus BAC clone RP23-298K16 from 19, compl... 46 4.1 1
(CU694257) CH251-350E14, complete sequence. 46 4.1 1
(CU326410) CH251-279M16, complete sequence. 46 4.1 1
(AC193680) Pan troglodytes BAC clone CH251-720N4 from chromo... 46 4.1 1
(EF135598) Trigonia nivea maturase K (matK) gene, partial cd... 46 4.1 1
(AY534990) Ludwigia peruviana trnK gene, intron; and maturas... 46 4.1 1
(AL357118) Human DNA sequence from clone RP11-292K6 on chrom... 46 4.1 1
(AC005878) citb_255_f_20, complete sequence. 46 4.1 1
(AC115561) Rattus norvegicus clone CH230-308B20, *** SEQUENC... 46 4.1 1
(AC100019) Mus musculus clone RP23-30I15, LOW-PASS SEQUENCE ... 46 4.1 1
(CU855706) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 4.1 1
(AC094278) Rattus norvegicus clone CH230-3G20, *** SEQUENCIN... 46 4.1 1
(AL512431) Human DNA sequence *** SEQUENCING CANCELLED *** f... 46 4.1 1
(AZ422121) 1M0200K14R Mouse 10kb plasmid UUGC1M library Mus ... 46 4.1 1
(FH720308) CHO_OF5061xb11f1.ab1 CHO_OF5 Nicotiana tabacum ge... 46 4.1 1
(ER563504) 1093015757820 Global-Ocean-Sampling_GS-36-01-01-2... 46 4.1 1
(AM658658) Entamoeba moshkovskii FIC GSS, clone mosh081g11.q1k. 46 4.1 1
(AM658637) Entamoeba moshkovskii FIC GSS, clone mosh081e09.q1k. 46 4.1 1
(EJ385983) 1092963811549 Global-Ocean-Sampling_GS-28-01-01-1... 46 4.1 1
(EC854643) HDE00002052 Hyperamoeba dachnaya Non-normalized (... 46 4.1 1
(CX588044) TTE00031335 Amplicon Express - Conjugative Form T... 46 4.1 1
(CT794832) Paramecium tetraurelia 5-PRIME EST from clone LK0... 46 4.1 1
(FF574435) TTEEU37THB Tetrahymena thermophila conjugation cD... 46 4.1 1
(EV848388) TT1EY41TH Tetrahymena thermophila SB210 cDNA libr... 46 4.1 1
(BJ403406) Dictyostelium discoideum cDNA clone:dds25d04, 3' ... 44 4.9 2
(CJ464099) Macaca fascicularis mRNA, clone: QnpA-12725, 5' e... 36 5.1 2
(DC240999) Petunia x hybrida cDNA, clone: PET04SEQ03507C. 36 5.1 2
(CJ457484) Macaca fascicularis mRNA, clone: QflA-23368, 5' e... 40 5.2 2
(CJ480797) Macaca fascicularis mRNA, clone: QtrA-16352, 5' e... 40 5.4 2
(CJ472148) Macaca fascicularis mRNA, clone: QorA-11910, 5' e... 40 5.4 2
(EJ524821) 1092955176413 Global-Ocean-Sampling_GS-29-01-01-1... 36 6.2 2
(AC175475) Bos taurus clone CH240-408J7, WORKING DRAFT SEQUE... 34 7.5 2
(AY331927) Ceratostema rauhii NADH dehydrogenase subunit F (... 40 7.9 2
(AY331944) Psammisia ulbrichiana NADH dehydrogenase subunit ... 40 7.9 2
(AY331942) Psammisia ecuadorensis NADH dehydrogenase subunit... 40 7.9 2
(AC108294) Rattus norvegicus clone CH230-277A22, *** SEQUENC... 36 9.6 4
>(BJ351236) Dictyostelium discoideum cDNA clone:dda42c13, 3' end,
single read.
Length = 692
Score = 1279 bits (645), Expect(2) = 0.0
Identities = 645/645 (100%)
Strand = Plus / Minus
Query: 833 atcacagagcatcttagaatactaattaccgagggtagagtattggatatctcatgtcct 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 atcacagagcatcttagaatactaattaccgagggtagagtattggatatctcatgtcct 633
Query: 893 catccacaatgtaaaaaagagatcaaagagagtgaaatctacatgttaaccaacgaaaag 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 catccacaatgtaaaaaagagatcaaagagagtgaaatctacatgttaaccaacgaaaag 573
Query: 953 aattggttaaagtatcaaaagttctcaatgattgcctcattaaaaacggaaccaatcaaa 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aattggttaaagtatcaaaagttctcaatgattgcctcattaaaaacggaaccaatcaaa 513
Query: 1013 tggtgtccaactccagattgtgatacaccagttcgtggtggtagtgaaaggaatccaata 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tggtgtccaactccagattgtgatacaccagttcgtggtggtagtgaaaggaatccaata 453
Query: 1073 ttaaattgtccaaaatgttcaaatgatttctgttggatatgtggtgaatattctcatgag 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ttaaattgtccaaaatgttcaaatgatttctgttggatatgtggtgaatattctcatgag 393
Query: 1133 ggtgcaaaatgtggtactgaggcaatggagttgcaaggaagaaagaataaatccatagaa 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ggtgcaaaatgtggtactgaggcaatggagttgcaaggaagaaagaataaatccatagaa 333
Query: 1193 tcggctgccaccgcttatattgatttcctcgagagtaataaacatttcgttaaaccatgt 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tcggctgccaccgcttatattgatttcctcgagagtaataaacatttcgttaaaccatgt 273
Query: 1253 ccaacttgtaaatctcatatcgagaaacatgatggttgtaatcatatgacctgtatcaat 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ccaacttgtaaatctcatatcgagaaacatgatggttgtaatcatatgacctgtatcaat 213
Query: 1313 tgtcaacatcaattctgttggttatgtatgaacccctatcaaagtggccactatagttca 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 tgtcaacatcaattctgttggttatgtatgaacccctatcaaagtggccactatagttca 153
Query: 1373 aatgaatatcccgaatgttttgatcgtcaatattattcaccattcgttcctgatacttat 1432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aatgaatatcccgaatgttttgatcgtcaatattattcaccattcgttcctgatacttat 93
Query: 1433 actccaccaccaccacgtagaagacatagaaaattaaaaatggct 1477
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 actccaccaccaccacgtagaagacatagaaaattaaaaatggct 48
Score = 52.0 bits (26), Expect(2) = 0.0
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 1485 ttactctctacactgctgcttttact 1510
||||||||||||||||||||||||||
Sbjct: 40 ttactctctacactgctgcttttact 15
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,672,872,469
Number of extensions: 103474272
Number of successful extensions: 8632240
Number of sequences better than 10.0: 87
Length of query: 1595
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1571
Effective length of database: 97,308,875,965
Effective search space: 152872244141015
Effective search space used: 152872244141015
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7. 8 |
| Homology vs Protein |
Query= Contig-U13940-1 (Contig-U13940-1Q) /CSM_Contig/Contig-U13940-1Q.Seq.d
(1595 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q9SKC4) RecName: Full=Probable E3 ubiquitin-protein ligase ARI1... 137 9e-31
BC160518_1(BC160518|pid:none) Xenopus tropicalis ring finger pro... 131 8e-29
AP003948_1(AP003948|pid:none) Oryza sativa Japonica Group genomi... 130 1e-28
(P50636) RecName: Full=E3 ubiquitin-protein ligase RNF19A; ... 130 1e-28
(Q2VJ60) RecName: Full=E3 ubiquitin-protein ligase RNF19A; ... 130 1e-28
AK147768_1(AK147768|pid:none) Mus musculus melanocyte cDNA, RIKE... 130 2e-28
AP008215_1107(AP008215|pid:none) Oryza sativa (japonica cultivar... 127 9e-28
AP006756_9(AP006756|pid:none) Oryza sativa Japonica Group genomi... 127 9e-28
(Q9JI90) RecName: Full=E3 ubiquitin-protein ligase RNF14; ... 127 1e-27
AK011316_1(AK011316|pid:none) Mus musculus 10 days embryo whole ... 127 1e-27
BT072513_1(BT072513|pid:none) Salmo salar clone ssal-rgf-528-167... 126 2e-27
AK023698_1(AK023698|pid:none) Homo sapiens cDNA FLJ13636 fis, cl... 125 4e-27
BC103648_1(BC103648|pid:none) Rattus norvegicus ring finger prot... 125 6e-27
(Q9Y4X5) RecName: Full=Protein ariadne-1 homolog; Short... 125 6e-27
CR456702_1(CR456702|pid:none) Homo sapiens full open reading fra... 125 6e-27
(Q9SKC2) RecName: Full=Probable E3 ubiquitin-protein ligase ARI1... 125 6e-27
DQ446587_1(DQ446587|pid:none) Arabidopsis thaliana clone pENTR22... 125 6e-27
AB209432_1(AB209432|pid:none) Homo sapiens mRNA for Ariadne-1 pr... 125 6e-27
CR859336_1(CR859336|pid:none) Pongo abelii mRNA; cDNA DKFZp459A2... 125 6e-27
(Q9Z1K5) RecName: Full=Protein ariadne-1 homolog; Short... 125 6e-27
(A2VEA3) RecName: Full=Protein ariadne-1 homolog; Short... 125 6e-27
BC166497_1(BC166497|pid:none) Rattus norvegicus ring finger prot... 125 6e-27
(Q9P3U4) RecName: Full=Uncharacterized RING finger protein C328.... 124 7e-27
BC067684_1(BC067684|pid:none) Danio rerio zgc:85905, mRNA (cDNA ... 124 7e-27
AC150786_17(AC150786|pid:none) Medicago truncatula clone mth2-17... 124 7e-27
AJ243190_1(AJ243190|pid:none) Homo sapiens mRNA for UbcH 7-bindi... 124 7e-27
AJ130977_1(AJ130977|pid:none) Mus musculus mRNA for Ariadne prot... 124 1e-26
AB037807_1(AB037807|pid:none) Homo sapiens mRNA for KIAA1386 pro... 124 1e-26
BC063861_1(BC063861|pid:none) Homo sapiens ankyrin repeat and IB... 124 1e-26
BC084251_1(BC084251|pid:none) Xenopus laevis hypothetical LOC495... 124 1e-26
(Q9P2G1) RecName: Full=Ankyrin repeat and IBR domain-containing ... 124 1e-26
BC057523_1(BC057523|pid:none) Danio rerio ariadne ubiquitin-conj... 123 2e-26
AJ510208_1(AJ510208|pid:none) Arabidopsis thaliana ari5 gene for... 123 2e-26
(Q8L829) RecName: Full=Probable E3 ubiquitin-protein ligase ARI5... 123 2e-26
BC133406_1(BC133406|pid:none) Bos taurus ring finger protein 14,... 122 3e-26
BC071542_1(BC071542|pid:none) Danio rerio ring finger protein 14... 121 6e-26
(A2A7Q9) RecName: Full=E3 ubiquitin-protein ligase RNF19B; ... 121 6e-26
(Q6ZMZ0) RecName: Full=E3 ubiquitin-protein ligase RNF19B; ... 121 6e-26
BX842692_3(BX842692|pid:none) Zebrafish DNA sequence from clone ... 120 1e-25
BC163269_1(BC163269|pid:none) Danio rerio si:ch211-278j3.3, mRNA... 120 1e-25
AK129343_1(AK129343|pid:none) Mus musculus mRNA for mKIAA1386 pr... 120 2e-25
BC145511_1(BC145511|pid:none) Mus musculus ankyrin repeat and IB... 120 2e-25
AK001774_1(AK001774|pid:none) Homo sapiens cDNA FLJ10912 fis, cl... 120 2e-25
AM461336_4(AM461336|pid:none) Vitis vinifera contig VV78X142132.... 120 2e-25
CR753876_3(CR753876|pid:none) Zebrafish DNA sequence from clone ... 119 4e-25
(Q1L8L6) RecName: Full=E3 ubiquitin-protein ligase RNF19B; ... 119 4e-25
BC099304_1(BC099304|pid:none) Xenopus laevis hypothetical protei... 119 4e-25
DQ665646_1(DQ665646|pid:none) Gibberella zeae RING-5 mRNA, compl... 118 5e-25
(Q84RR0) RecName: Full=Probable E3 ubiquitin-protein ligase ARI7... 118 5e-25
(Q8W468) RecName: Full=Probable E3 ubiquitin-protein ligase ARI8... 117 9e-25
U84248_1(U84248|pid:none) Aedes aegypti blood meal-induced prote... 117 1e-24
AB169516_1(AB169516|pid:none) Macaca fascicularis brain cDNA, cl... 117 1e-24
AK223550_1(AK223550|pid:none) Homo sapiens mRNA for ariadne homo... 117 2e-24
(O95376) RecName: Full=Protein ariadne-2 homolog; Short... 117 2e-24
AK001800_1(AK001800|pid:none) Homo sapiens cDNA FLJ10938 fis, cl... 117 2e-24
(Q1L8G6) RecName: Full=Ankyrin repeat and IBR domain-containing ... 116 2e-24
BC062374_1(BC062374|pid:none) Homo sapiens ring finger protein 1... 116 2e-24
BC133211_1(BC133211|pid:none) Xenopus laevis hypothetical protei... 116 3e-24
AM484034_2(AM484034|pid:none) Vitis vinifera contig VV78X069996.... 116 3e-24
AJ130978_1(AJ130978|pid:none) Homo sapiens mRNA for Ariadne-2 pr... 115 3e-24
BC161131_1(BC161131|pid:none) Xenopus tropicalis hypothetical pr... 115 3e-24
AE014296_1929(AE014296|pid:none) Drosophila melanogaster chromos... 115 5e-24
CR382132_1140(CR382132|pid:none) Yarrowia lipolytica strain CLIB... 115 5e-24
BC074717_1(BC074717|pid:none) Xenopus tropicalis ariadne homolog... 115 6e-24
BT067251_1(BT067251|pid:none) Zea mays full-length cDNA clone ZM... 114 8e-24
AM920437_426(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 114 1e-23
AE017349_298(AE017349|pid:none) Cryptococcus neoformans var. neo... 114 1e-23
AP007155_312(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 114 1e-23
AY484589_5(AY484589|pid:none) Musa acuminata clone MuH9, genomic... 113 2e-23
GM754324_1(GM754324|pid:none) Sequence 17 from Patent WO20081168... 113 2e-23
AL832329_1(AL832329|pid:none) Homo sapiens mRNA; cDNA DKFZp451E0... 113 2e-23
EU832137_1(EU832137|pid:none) Synthetic construct Homo sapiens c... 113 2e-23
BC063311_1(BC063311|pid:none) Homo sapiens ring finger protein 1... 113 2e-23
(Q7Z419) RecName: Full=E3 ubiquitin-protein ligase RNF144B; ... 113 2e-23
AL138725_4(AL138725|pid:none) Human DNA sequence from clone RP11... 113 2e-23
CR382134_55(CR382134|pid:none) Debaryomyces hansenii strain CBS7... 112 3e-23
AK133544_1(AK133544|pid:none) Mus musculus adult male xiphoid ca... 112 4e-23
AK172904_1(AK172904|pid:none) Mus musculus mRNA for mKIAA0161 pr... 112 4e-23
BT041059_1(BT041059|pid:none) Zea mays full-length cDNA clone ZM... 112 5e-23
(P50876) RecName: Full=Probable E3 ubiquitin-protein ligase RNF1... 111 7e-23
D79983_1(D79983|pid:none) Homo sapiens KIAA0161 mRNA, partial cds. 111 7e-23
U80847_5(U80847|pid:none) Caenorhabditis elegans cosmid C17H11, ... 111 9e-23
(A5PK27) RecName: Full=E3 ubiquitin-protein ligase RNF144B; ... 111 9e-23
U80847_8(U80847|pid:none) Caenorhabditis elegans cosmid C17H11, ... 111 9e-23
U80847_6(U80847|pid:none) Caenorhabditis elegans cosmid C17H11, ... 111 9e-23
U80847_7(U80847|pid:none) Caenorhabditis elegans cosmid C17H11, ... 111 9e-23
AY119482_1(AY119482|pid:none) Drosophila melanogaster GH07166 fu... 110 1e-22
T25555(T25555)hypothetical protein C17H11.6 - Caenorhabditis ele... 110 1e-22
AC006790_10(AC006790|pid:none) Caenorhabditis elegans cosmid Y49... 110 1e-22
AF003137_8(AF003137|pid:none) Caenorhabditis elegans cosmid C27A... 108 4e-22
(Q94981) RecName: Full=Protein ariadne-1; Short=Ari-1; ... 108 4e-22
H87793(H87793)protein C27A12.8 [imported] - Caenorhabditis elegans 108 4e-22
T29562(T29562)hypothetical protein T12E12.1 - Caenorhabditis ele... 108 4e-22
BT045523_1(BT045523|pid:none) Salmo salar clone ssal-rgf-524-064... 108 4e-22
BC031483_1(BC031483|pid:none) Homo sapiens ankyrin repeat and IB... 107 9e-22
AC009259_41(AC009259|pid:none) Trypanosoma brucei chromosome 6 c... 105 4e-21
DQ653034_1(DQ653034|pid:none) Arabidopsis thaliana clone 0000019... 105 4e-21
FN392319_945(FN392319|pid:none) Pichia pastoris GS115 chromosome... 105 6e-21
AL662952_29(AL662952|pid:none) Oryza sativa genomic DNA, chromos... 105 6e-21
AF003137_7(AF003137|pid:none) Caenorhabditis elegans cosmid C27A... 104 8e-21
AF003137_6(AF003137|pid:none) Caenorhabditis elegans cosmid C27A... 104 8e-21
BX293564_1(BX293564|pid:none) Zebrafish DNA sequence from clone ... 104 8e-21
(Q5RFV4) RecName: Full=Probable E3 ubiquitin-protein ligase RNF1... 104 8e-21
BC124834_1(BC124834|pid:none) Xenopus laevis E3 ubiquitin-protei... 104 1e-20
BC130177_1(BC130177|pid:none) Xenopus laevis E3 ubiquitin-protei... 104 1e-20
AC007767_10(AC007767|pid:none) Sequence of BAC F5D14 from Arabid... 102 5e-20
AF003137_5(AF003137|pid:none) Caenorhabditis elegans cosmid C27A... 101 7e-20
CR954211_255(CR954211|pid:none) Ostreococcus tauri strain OTTH05... 100 1e-19
CU928180_410(CU928180|pid:none) Kluyveromyces thermotolerans str... 100 1e-19
(Q9LVW9) RecName: Full=Putative E3 ubiquitin-protein ligase ARI4... 100 2e-19
AM502248_253(AM502248|pid:none) Leishmania infantum chromosome 30. 100 3e-19
BC117807_1(BC117807|pid:none) Mus musculus ring finger protein 1... 99 6e-19
AC103891_9(AC103891|pid:none) Oryza sativa (japonica cultivar-gr... 98 1e-18
AL132862_32(AL132862|pid:none) Caenorhabditis elegans YAC Y73F8A... 98 1e-18
AP008210_1738(AP008210|pid:none) Oryza sativa (japonica cultivar... 97 2e-18
AK063313_1(AK063313|pid:none) Oryza sativa Japonica Group cDNA c... 97 2e-18
AP008210_1736(AP008210|pid:none) Oryza sativa (japonica cultivar... 97 2e-18
AL662952_28(AL662952|pid:none) Oryza sativa genomic DNA, chromos... 97 2e-18
CU928179_894(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 96 3e-18
AP008215_1369(AP008215|pid:none) Oryza sativa (japonica cultivar... 96 4e-18
FN317350_1(FN317350|pid:none) Schistosoma japonicum isolate Anhu... 95 8e-18
FM992688_1298(FM992688|pid:none) Candida dubliniensis CD36 chrom... 95 8e-18
(Q84RR2) RecName: Full=Probable E3 ubiquitin-protein ligase ARI2... 95 8e-18
BX936317_1(BX936317|pid:none) Zebrafish DNA sequence from clone ... 94 1e-17
CR954202_295(CR954202|pid:none) Ostreococcus tauri strain OTTH05... 93 2e-17
BC124567_1(BC124567|pid:none) Xenopus tropicalis hypothetical pr... 92 4e-17
CP000582_382(CP000582|pid:none) Ostreococcus lucimarinus CCE9901... 92 7e-17
AM910990_369(AM910990|pid:none) Plasmodium knowlesi strain H chr... 92 7e-17
CU633438_119(CU633438|pid:none) Podospora anserina genomic DNA c... 91 9e-17
BC155331_1(BC155331|pid:none) Danio rerio zgc:175152, mRNA (cDNA... 91 1e-16
AB018114_12(AB018114|pid:none) Arabidopsis thaliana genomic DNA,... 90 2e-16
AP008210_1737(AP008210|pid:none) Oryza sativa (japonica cultivar... 90 2e-16
AB168452_1(AB168452|pid:none) Macaca fascicularis testis cDNA cl... 90 2e-16
AE013599_1207(AE013599|pid:none) Drosophila melanogaster chromos... 90 2e-16
AX593443_1(AX593443|pid:none) Sequence 5 from Patent WO02088357.... 90 3e-16
AL606977_2(AL606977|pid:none) Mouse DNA sequence from clone RP23... 90 3e-16
AK122811_1(AK122811|pid:none) Homo sapiens cDNA FLJ16403 fis, cl... 90 3e-16
AP005090_14(AP005090|pid:none) Oryza sativa Japonica Group genom... 90 3e-16
AC091246_16(AC091246|pid:none) Oryza sativa (japonica cultivar-g... 90 3e-16
AC146875_19(AC146875|pid:none) Brassica rapa clone BAC KBrH117M1... 90 3e-16
AK122351_1(AK122351|pid:none) Mus musculus premature mRNA for mK... 89 3e-16
AY145132_1(AY145132|pid:none) Homo sapiens p53-associated parkin... 89 3e-16
CR380953_328(CR380953|pid:none) Candida glabrata strain CBS138 c... 89 3e-16
AB208857_1(AB208857|pid:none) Homo sapiens mRNA for ariadne homo... 89 3e-16
CR749841_1(CR749841|pid:none) Homo sapiens mRNA; cDNA DKFZp686G1... 89 3e-16
CR749511_1(CR749511|pid:none) Homo sapiens mRNA; cDNA DKFZp686P2... 89 3e-16
BC002879_1(BC002879|pid:none) Homo sapiens cullin 9, mRNA (cDNA ... 89 3e-16
AL080237_4(AL080237|pid:none) Arabidopsis thaliana DNA chromosom... 89 3e-16
DQ446662_1(DQ446662|pid:none) Arabidopsis thaliana clone pENTR22... 88 8e-16
AC126012_28(AC126012|pid:none) Medicago truncatula clone mth2-27... 88 8e-16
FN357707_2(FN357707|pid:none) Schistosoma mansoni genome sequenc... 88 1e-15
T16477(T16477) hypothetical protein F56D2.5 - Caenorhabditis ele... 88 1e-15
JC5983(JC5983) protein kinase C-interacting RBCC protein 1 - rat... 88 1e-15
AC116305_135(AC116305|pid:none) Dictyostelium discoideum chromos... 88 1e-15
BC061723_1(BC061723|pid:none) Rattus norvegicus RanBP-type and C... 88 1e-15
(Q62921) RecName: Full=RanBP-type and C3HC4-type zinc finger-con... 88 1e-15
AY811388_1(AY811388|pid:none) Schistosoma japonicum SJCHGC05846 ... 87 2e-15
AF124663_1(AF124663|pid:none) Mus musculus UbcM4 interacting pro... 86 3e-15
AY003872_22(AY003872|pid:none) Plasmodium vivax YAC 1H14, comple... 86 4e-15
BC015219_1(BC015219|pid:none) Homo sapiens RanBP-type and C3HC4-... 85 7e-15
AL121747_1(AL121747|pid:none) Human DNA sequence from clone RP5-... 85 7e-15
AB107766_1(AB107766|pid:none) Homo sapiens HOIL-1 mRNA for ubiqu... 85 7e-15
CP001323_837(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 85 9e-15
BC126562_1(BC126562|pid:none) Bos taurus RanBP-type and C3HC4-ty... 84 1e-14
AC091246_15(AC091246|pid:none) Oryza sativa (japonica cultivar-g... 84 1e-14
AL513467_20(AL513467|pid:none) Neurospora crassa DNA linkage gro... 84 1e-14
AC151460_16(AC151460|pid:none) Medicago truncatula clone mth2-6f... 82 4e-14
AB026632_12(AB026632|pid:none) Arabidopsis thaliana genomic DNA,... 82 4e-14
DQ447006_1(DQ447006|pid:none) Arabidopsis thaliana clone pENTR22... 82 6e-14
CU928168_688(CU928168|pid:none) Kluyveromyces thermotolerans str... 82 6e-14
AM426870_3(AM426870|pid:none) Vitis vinifera contig VV78X082398.... 82 7e-14
AK073786_1(AK073786|pid:none) Oryza sativa Japonica Group cDNA c... 82 7e-14
AL353995_28(AL353995|pid:none) Arabidopsis thaliana DNA chromoso... 82 7e-14
AL442164_19(AL442164|pid:none) Neurospora crassa DNA linkage gro... 81 9e-14
T31653(T31653)hypothetical protein Y57A10A.ff - Caenorhabditis e... 80 2e-13
AL117195_29(AL117195|pid:none) Caenorhabditis elegans YAC Y57A10... 80 2e-13
(Q9FFN9) RecName: Full=Probable E3 ubiquitin-protein ligase ARI1... 80 2e-13
AK074486_1(AK074486|pid:none) Homo sapiens cDNA FLJ90005 fis, cl... 80 2e-13
AP005426_8(AP005426|pid:none) Oryza sativa Japonica Group genomi... 80 2e-13
BT069814_1(BT069814|pid:none) Zea mays full-length cDNA clone ZM... 80 2e-13
EU965180_1(EU965180|pid:none) Zea mays clone 284321 unknown mRNA. 80 2e-13
(Q8TC41) RecName: Full=Probable E3 ubiquitin-protein ligase RNF2... 80 3e-13
AC007134_10(AC007134|pid:none) Arabidopsis thaliana chromosome 2... 79 4e-13
BT071882_1(BT071882|pid:none) Salmo salar clone ssal-rgf-501-287... 79 4e-13
BT045009_1(BT045009|pid:none) Salmo salar clone ssal-rgf-509-300... 79 4e-13
EU957044_1(EU957044|pid:none) Zea mays clone 1581205 ubiquitin-p... 79 5e-13
AB022220_3(AB022220|pid:none) Arabidopsis thaliana genomic DNA, ... 79 5e-13
EU976691_1(EU976691|pid:none) Zea mays clone 987363 unknown mRNA. 79 5e-13
(Q9US46) RecName: Full=E3 ubiquitin-protein ligase itt1; ... 79 6e-13
AL662952_27(AL662952|pid:none) Oryza sativa genomic DNA, chromos... 79 6e-13
AM488350_1(AM488350|pid:none) Vitis vinifera contig VV78X205586.... 78 8e-13
AL138657_16(AL138657|pid:none) Arabidopsis thaliana DNA chromoso... 78 8e-13
BC074096_1(BC074096|pid:none) Danio rerio zgc:91964, mRNA (cDNA ... 78 1e-12
AM920435_1276(AM920435|pid:none) Penicillium chrysogenum Wiscons... 78 1e-12
BX324213_2(BX324213|pid:none) Zebrafish DNA sequence from clone ... 78 1e-12
T16983(T16983) hypothetical protein - curled-leaved tobacco (fra... 77 1e-12
AC009999_16(AC009999|pid:none) Sequence of BAC T20M3 from Arabid... 77 2e-12
CR548612_52(CR548612|pid:none) Paramecium tetraurelia macronucle... 77 2e-12
EF085352_1(EF085352|pid:none) Picea sitchensis clone WS02810_G06... 77 2e-12
AC142210_5(AC142210|pid:none) Solanum demissum chromosome 11 clo... 77 2e-12
AC145165_16(AC145165|pid:none) Medicago truncatula clone mth2-4j... 77 2e-12
AL024486_3(AL024486|pid:none) Arabidopsis thaliana DNA chromosom... 77 2e-12
DQ446542_1(DQ446542|pid:none) Arabidopsis thaliana clone pENTR22... 76 4e-12
CR382134_380(CR382134|pid:none) Debaryomyces hansenii strain CBS... 76 4e-12
DQ446541_1(DQ446541|pid:none) Arabidopsis thaliana clone pENTR22... 75 7e-12
AE014134_1216(AE014134|pid:none) Drosophila melanogaster chromos... 75 7e-12
AP007164_127(AP007164|pid:none) Aspergillus oryzae RIB40 genomic... 75 7e-12
EU637017_18(EU637017|pid:none) Adineta vaga glycoprotein gene, p... 75 9e-12
DQ056142_3(DQ056142|pid:none) Coprinellus disseminatus strain C3... 73 3e-11
AL138657_12(AL138657|pid:none) Arabidopsis thaliana DNA chromoso... 73 3e-11
BC126008_1(BC126008|pid:none) Xenopus laevis ring finger protein... 72 4e-11
AM472451_3(AM472451|pid:none) Vitis vinifera contig VV78X011197.... 70 2e-10
DQ059093_1(DQ059093|pid:none) Arabidopsis thaliana RING domain p... 70 2e-10
(Q9C5A4) RecName: Full=Probable E3 ubiquitin-protein ligase ARI1... 70 2e-10
AK109320_1(AK109320|pid:none) Oryza sativa Japonica Group cDNA c... 70 3e-10
CR942479_1(CR942479|pid:none) Xenopus tropicalis finished cDNA, ... 69 4e-10
BT062797_1(BT062797|pid:none) Zea mays full-length cDNA clone ZM... 69 4e-10
BC093281_1(BC093281|pid:none) Danio rerio Parkinson disease (aut... 69 6e-10
AM270347_58(AM270347|pid:none) Aspergillus niger contig An15c020... 69 6e-10
FJ155070_1(FJ155070|pid:none) Triticum turgidum IBR1/IBR2 fusion... 69 6e-10
AC006300_3(AC006300|pid:none) Arabidopsis thaliana chromosome 2 ... 69 6e-10
AF360999_1(AF360999|pid:none) Mus musculus UbcM4-interacting pro... 68 8e-10
AK068795_1(AK068795|pid:none) Oryza sativa Japonica Group cDNA c... 68 1e-09
AL136128_3(AL136128|pid:none) Human DNA sequence from clone RP1-... 68 1e-09
CU633865_267(CU633865|pid:none) Podospora anserina genomic DNA c... 67 1e-09
AK166197_1(AK166197|pid:none) Mus musculus mammary gland RCB-052... 67 1e-09
AB179327_1(AB179327|pid:none) Macaca fascicularis testis cDNA cl... 67 2e-09
AK122711_1(AK122711|pid:none) Homo sapiens cDNA FLJ16199 fis, cl... 67 2e-09
AK055542_1(AK055542|pid:none) Homo sapiens cDNA FLJ30980 fis, cl... 67 2e-09
(Q924T7) RecName: Full=RING finger protein 31; &BC057595_1(BC05... 67 2e-09
BC009821_1(BC009821|pid:none) Homo sapiens ring finger protein 3... 67 2e-09
AY256461_1(AY256461|pid:none) Homo sapiens zinc in-between-ring-... 67 2e-09
(Q96EP0) RecName: Full=RING finger protein 31; AltName: Full=Zin... 67 2e-09
BC017376_1(BC017376|pid:none) Homo sapiens ring finger protein 3... 67 2e-09
AB384423_1(AB384423|pid:none) Synthetic construct DNA, clone: pF... 67 2e-09
AX405817_1(AX405817|pid:none) Sequence 232 from Patent WO0222660. 66 3e-09
CR858705_1(CR858705|pid:none) Pongo abelii mRNA; cDNA DKFZp459K2... 66 4e-09
AF361001_1(AF361001|pid:none) Mus musculus UbcM4-interacting pro... 66 4e-09
AJ510215_1(AJ510215|pid:none) Arabidopsis thaliana ari12 gene fo... 66 4e-09
AF381281_1(AF381281|pid:none) Rattus norvegicus parkin isoform m... 65 5e-09
AF168004_1(AF168004|pid:none) Rattus norvegicus Parkin mRNA, par... 65 5e-09
(Q9JK66) RecName: Full=E3 ubiquitin-protein ligase parkin; ... 65 5e-09
AY231421_1(AY231421|pid:none) Arabidopsis thaliana hypothetical ... 65 5e-09
EU972080_1(EU972080|pid:none) Zea mays clone 374552 ubiquitin-pr... 65 5e-09
AB039878_1(AB039878|pid:none) Rattus norvegicus mRNA for Parkin,... 65 5e-09
AF343574_1(AF343574|pid:none) Rattus norvegicus parkin transcrip... 65 5e-09
AF381277_1(AF381277|pid:none) Rattus norvegicus parkin isoform m... 65 5e-09
(Q04638) RecName: Full=Translation termination inhibitor protein... 65 7e-09
CU928174_604(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 65 7e-09
AL035697_3(AL035697|pid:none) Human DNA sequence from clone RP1-... 65 9e-09
AL035697_5(AL035697|pid:none) Human DNA sequence from clone RP1-... 65 9e-09
(O60260) RecName: Full=E3 ubiquitin-protein ligase parkin; ... 65 9e-09
AL035697_4(AL035697|pid:none) Human DNA sequence from clone RP1-... 65 9e-09
(Q9WVS6) RecName: Full=E3 ubiquitin-protein ligase parkin; ... 65 9e-09
AB009973_1(AB009973|pid:none) Homo sapiens mRNA for Parkin, comp... 65 9e-09
AB245403_1(AB245403|pid:none) Homo sapiens mRNA for parkin 2, co... 65 9e-09
AL138657_5(AL138657|pid:none) Arabidopsis thaliana DNA chromosom... 64 2e-08
AF513718_1(AF513718|pid:none) Homo sapiens E3 ubiquitin ligase (... 64 2e-08
AM393688_1(AM393688|pid:none) Synthetic construct Homo sapiens c... 64 2e-08
AK297416_1(AK297416|pid:none) Homo sapiens cDNA FLJ58201 complet... 64 2e-08
(Q9NWF9) RecName: Full=E3 ubiquitin-protein ligase RNF216; ... 64 2e-08
AY177396_1(AY177396|pid:none) Homo sapiens E3 ubiquitin ligase T... 64 2e-08
AY062174_1(AY062174|pid:none) Homo sapiens RING-like zinc finger... 64 2e-08
AE014296_3681(AE014296|pid:none) Drosophila melanogaster chromos... 64 2e-08
FN357329_17(FN357329|pid:none) Schistosoma mansoni genome sequen... 63 3e-08
BX908808_23(BX908808|pid:none) Neurospora crassa DNA linkage gro... 63 3e-08
AK314332_1(AK314332|pid:none) Homo sapiens cDNA, FLJ95092, highl... 63 3e-08
CU633438_942(CU633438|pid:none) Podospora anserina genomic DNA c... 63 3e-08
AB053120_5(AB053120|pid:none) Mus musculus DNA, proteasome activ... 63 3e-08
AB172297_1(AB172297|pid:none) Macaca fascicularis brain cDNA clo... 62 5e-08
AF228527_1(AF228527|pid:none) Homo sapiens TRIAD3 mRNA, partial ... 62 5e-08
AP008210_1735(AP008210|pid:none) Oryza sativa (japonica cultivar... 62 5e-08
AM920428_1298(AM920428|pid:none) Penicillium chrysogenum Wiscons... 62 5e-08
BC079540_1(BC079540|pid:none) Mus musculus ring finger protein 2... 62 6e-08
(Q8C1U3) RecName: Full=E3 ubiquitin-protein ligase RNF216; ... 62 6e-08
AK154368_1(AK154368|pid:none) Mus musculus NOD-derived CD11c +ve... 62 6e-08
AB005234_24(AB005234|pid:none) Arabidopsis thaliana genomic DNA,... 61 1e-07
BX248497_16(BX248497|pid:none) Zebrafish DNA sequence from clone... 61 1e-07
(Q84RQ8) RecName: Full=Probable E3 ubiquitin-protein ligase ARI1... 61 1e-07
AL121747_10(AL121747|pid:none) Human DNA sequence from clone RP5... 61 1e-07
EU967307_1(EU967307|pid:none) Zea mays clone 301304 ubiquitin-pr... 60 2e-07
AK147861_1(AK147861|pid:none) Mus musculus melanocyte cDNA, RIKE... 59 4e-07
AF381285_1(AF381285|pid:none) Rattus norvegicus parkin isoform m... 59 5e-07
AC130802_18(AC130802|pid:none) Medicago truncatula clone mth2-28... 59 5e-07
AM270309_42(AM270309|pid:none) Aspergillus niger contig An14c001... 59 7e-07
AJ009771_1(AJ009771|pid:none) Homo sapiens mRNA for putative RIN... 58 9e-07
AC004747_5(AC004747|pid:none) Arabidopsis thaliana chromosome 2 ... 58 1e-06
AE017348_256(AE017348|pid:none) Cryptococcus neoformans var. neo... 57 1e-06
AF063866_224(AF063866|pid:none) Melanoplus sanguinipes entomopox... 57 2e-06
AK109104_1(AK109104|pid:none) Oryza sativa Japonica Group cDNA c... 56 4e-06
BX842627_3(BX842627|pid:none) Neurospora crassa DNA linkage grou... 56 4e-06
AP007151_1216(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 56 4e-06
DQ091175_1(DQ091175|pid:none) Sus scrofa ring finger protein 19 ... 56 4e-06
AY810866_1(AY810866|pid:none) Schistosoma japonicum SJCHGC05864 ... 55 6e-06
FN319083_1(FN319083|pid:none) Schistosoma japonicum isolate Anhu... 55 6e-06
AP008214_1201(AP008214|pid:none) Oryza sativa (japonica cultivar... 55 7e-06
(Q9FFP1) RecName: Full=Probable E3 ubiquitin-protein ligase ARI1... 54 1e-05
AL162691_4(AL162691|pid:none) Arabidopsis thaliana DNA chromosom... 54 1e-05
FJ546195_1(FJ546195|pid:none) Macaca fascicularis parkin variant... 54 2e-05
AP007169_18(AP007169|pid:none) Aspergillus oryzae RIB40 genomic ... 54 2e-05
FN357552_8(FN357552|pid:none) Schistosoma mansoni genome sequenc... 54 2e-05
AM466554_5(AM466554|pid:none) Vitis vinifera contig VV78X031799.... 52 8e-05
BT078827_1(BT078827|pid:none) Esox lucius clone eluc-evq-508-297... 51 1e-04
AC006300_4(AC006300|pid:none) Arabidopsis thaliana chromosome 2 ... 50 2e-04
AP008217_14(AP008217|pid:none) Oryza sativa (japonica cultivar-g... 50 2e-04
BT074412_1(BT074412|pid:none) Osmerus mordax clone omor-eva-501-... 50 2e-04
BT049431_1(BT049431|pid:none) Salmo salar clone ssal-rgb-553-210... 50 2e-04
AL021474_1(AL021474|pid:none) Caenorhabditis elegans YAC Y32F6A,... 50 2e-04
AP004380_19(AP004380|pid:none) Oryza sativa Japonica Group genom... 50 2e-04
AY207374_1(AY207374|pid:none) Drosophila melanogaster PARKIN (pa... 49 4e-04
AB010070_7(AB010070|pid:none) Arabidopsis thaliana genomic DNA, ... 48 9e-04
AC005917_20(AC005917|pid:none) Arabidopsis thaliana chromosome 2... 48 9e-04
CU638744_579(CU638744|pid:none) Podospora anserina genomic DNA c... 47 0.002
BC061943_1(BC061943|pid:none) Xenopus laevis hypothetical protei... 47 0.002
AL353871_3(AL353871|pid:none) Arabidopsis thaliana DNA chromosom... 47 0.003
T21000(T21000)hypothetical protein F15H10.4 - Caenorhabditis ele... 47 0.003
BX294181_3(BX294181|pid:none) Zebrafish DNA sequence from clone ... 46 0.003
AF389451_78(AF389451|pid:none) Tiger frog virus, complete genome. 45 0.006
AY150217_31(AY150217|pid:none) Ambystoma tigrinum stebbensi viru... 45 0.010
CU638744_346(CU638744|pid:none) Podospora anserina genomic DNA c... 44 0.013
AC145222_1(AC145222|pid:none) Medicago truncatula clone mth2-29a... 44 0.013
(Q6FY76) RecName: Full=DNA repair protein RAD5; EC=3.6.... 44 0.022
D88072(D88072)protein ZK1240.1 [imported] - Caenorhabditis elegans 43 0.029
CU633895_618(CU633895|pid:none) Podospora anserina genomic DNA c... 43 0.029
AL138657_14(AL138657|pid:none) Arabidopsis thaliana DNA chromoso... 43 0.029
AM270237_13(AM270237|pid:none) Aspergillus niger contig An11c020... 43 0.037
AC133004_8(AC133004|pid:none) Oryza sativa (japonica cultivar-gr... 43 0.037
AJ890364_354(AJ890364|pid:none) Emiliania huxleyi virus 86 isola... 43 0.037
AL831735_10(AL831735|pid:none) Mouse DNA sequence from clone RP2... 43 0.037
CU928169_380(CU928169|pid:none) Kluyveromyces thermotolerans str... 42 0.049
AK317090_1(AK317090|pid:none) Arabidopsis thaliana AT5G10650 mRN... 42 0.064
DQ446737_1(DQ446737|pid:none) Arabidopsis thaliana clone pENTR22... 42 0.064
AY099680_1(AY099680|pid:none) Arabidopsis thaliana Pspzf zinc fi... 42 0.064
DQ653132_1(DQ653132|pid:none) Arabidopsis thaliana clone 0000010... 42 0.064
BT015918_1(BT015918|pid:none) Arabidopsis thaliana At5g10650 gen... 42 0.064
T19780(T19780) hypothetical protein C36B1.9 - Caenorhabditis ele... 42 0.064
AF016677_8(AF016677|pid:none) Caenorhabditis elegans cosmid ZK12... 41 0.14
AP002066_3(AP002066|pid:none) Arabidopsis thaliana genomic DNA, ... 40 0.19
CU928173_374(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 40 0.19
FM992690_24(FM992690|pid:none) Candida dubliniensis CD36 chromos... 40 0.24
(Q8CEF8) RecName: Full=RING finger protein 222; &AL603662_6(AL6... 40 0.24
BC106266_1(BC106266|pid:none) Xenopus laevis hypothetical protei... 40 0.24
BC073533_1(BC073533|pid:none) Xenopus laevis hypothetical protei... 40 0.24
AK226506_1(AK226506|pid:none) Arabidopsis thaliana mRNA for hypo... 40 0.32
AF424605_1(AF424605|pid:none) Arabidopsis thaliana AT4g31450/F3L... 40 0.32
AM485058_5(AM485058|pid:none) Vitis vinifera contig VV78X234046.... 40 0.32
AF440570_31(AF440570|pid:none) Shrimp white spot syndrome virus,... 40 0.32
AF332093_502(AF332093|pid:none) White spot syndrome virus, compl... 40 0.32
AF369029_24(AF369029|pid:none) White spot syndrome virus, comple... 40 0.32
BX294181_4(BX294181|pid:none) Zebrafish DNA sequence from clone ... 40 0.32
AK137636_1(AK137636|pid:none) Mus musculus adult female vagina c... 40 0.32
U97193_14(U97193|pid:none) Caenorhabditis elegans cosmid C06A5, ... 39 0.41
T25524(T25524)hypothetical protein C06A5.9 - Caenorhabditis eleg... 39 0.41
BX548047_2(BX548047|pid:none) Zebrafish DNA sequence from clone ... 39 0.41
AK063978_1(AK063978|pid:none) Oryza sativa Japonica Group cDNA c... 39 0.54
BC097589_1(BC097589|pid:none) Xenopus laevis hypothetical protei... 39 0.54
AK227805_1(AK227805|pid:none) Arabidopsis thaliana mRNA for hypo... 39 0.54
CR382126_526(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 39 0.54
AL078465_3(AL078465|pid:none) Arabidopsis thaliana DNA chromosom... 39 0.54
CU633901_116(CU633901|pid:none) Podospora anserina genomic DNA c... 39 0.54
CU928179_551(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 39 0.54
BT039449_1(BT039449|pid:none) Zea mays full-length cDNA clone ZM... 39 0.54
AP002050_6(AP002050|pid:none) Arabidopsis thaliana genomic DNA, ... 39 0.70
EU969154_1(EU969154|pid:none) Zea mays clone 326453 unknown mRNA. 39 0.70
AL607001_8(AL607001|pid:none) Oryza sativa genomic DNA, chromoso... 39 0.70
CP000592_257(CP000592|pid:none) Ostreococcus lucimarinus CCE9901... 39 0.70
BT062474_1(BT062474|pid:none) Zea mays full-length cDNA clone ZM... 39 0.70
AY088181_1(AY088181|pid:none) Arabidopsis thaliana clone 426 mRN... 39 0.70
CR855186_9(CR855186|pid:none) Oryza sativa genomic DNA, chromoso... 39 0.70
EF086824_1(EF086824|pid:none) Picea sitchensis clone WS02711_F11... 39 0.70
(Q5D7I2) RecName: Full=Tripartite motif-containing protein 5; ... 39 0.70
EU964568_1(EU964568|pid:none) Zea mays clone 280056 protein bind... 38 0.92
AC146651_29(AC146651|pid:none) Medicago truncatula clone mth2-11... 38 0.92
AP004880_11(AP004880|pid:none) Oryza sativa Japonica Group genom... 38 0.92
AP008208_2471(AP008208|pid:none) Oryza sativa (japonica cultivar... 38 0.92
(P32849) RecName: Full=DNA repair protein RAD5; EC=3.6.... 38 0.92
AC009259_55(AC009259|pid:none) Trypanosoma brucei chromosome 6 c... 38 0.92
(Q5D7I5) RecName: Full=Tripartite motif-containing protein 5; ... 38 0.92
BT056001_1(BT056001|pid:none) Zea mays full-length cDNA clone ZM... 38 0.92
CR954210_296(CR954210|pid:none) Ostreococcus tauri strain OTTH05... 38 0.92
BC142815_1(BC142815|pid:none) Danio rerio zgc:165481, mRNA (cDNA... 38 0.92
AB006707_5(AB006707|pid:none) Arabidopsis thaliana genomic DNA, ... 38 1.2
BC124458_1(BC124458|pid:none) Danio rerio zgc:153797, mRNA (cDNA... 38 1.2
AM454700_2(AM454700|pid:none) Vitis vinifera contig VV78X016295.... 38 1.2
AK099917_1(AK099917|pid:none) Oryza sativa Japonica Group cDNA c... 38 1.2
AC148486_14(AC148486|pid:none) Medicago truncatula clone mth2-56... 38 1.2
BX784025_2(BX784025|pid:none) Zebrafish DNA sequence from clone ... 38 1.2
S46103_1(S46103|pid:none) REV2=nucleotide-binding protein with z... 38 1.2
AK296576_1(AK296576|pid:none) Homo sapiens cDNA FLJ60018 complet... 38 1.2
BT020585_1(BT020585|pid:none) Arabidopsis thaliana At5g45290 gen... 38 1.2
(Q6CJM4) RecName: Full=DNA repair protein RAD5; EC=3.6.... 38 1.2
CR954214_274(CR954214|pid:none) Ostreococcus tauri strain OTTH05... 38 1.2
AY048293_1(AY048293|pid:none) Arabidopsis thaliana AT5g41350/MYC... 38 1.2
BC124291_1(BC124291|pid:none) Danio rerio zgc:153258, mRNA (cDNA... 38 1.2
AB020744_8(AB020744|pid:none) Arabidopsis thaliana genomic DNA, ... 38 1.2
AE017347_54(AE017347|pid:none) Cryptococcus neoformans var. neof... 38 1.2
AP009553_6(AP009553|pid:none) Sus scrofa genomic DNA, chromosome... 37 1.6
CU638743_227(CU638743|pid:none) Podospora anserina genomic DNA c... 37 1.6
AF099919_5(AF099919|pid:none) Caenorhabditis elegans cosmid F40G... 37 1.6
EU977069_1(EU977069|pid:none) Zea mays clone 998178 zinc finger,... 37 1.6
AL033391_13(AL033391|pid:none) C.albicans cosmid Ca20C1. 37 1.6
(Q9P3U8) RecName: Full=Uncharacterized RING finger protein C548.... 37 1.6
AB158487_6(AB158487|pid:none) Sus scrofa PPP1R11, ZNRD1, RNF39, ... 37 1.6
AK120070_1(AK120070|pid:none) Oryza sativa Japonica Group cDNA c... 37 1.6
AM502246_136(AM502246|pid:none) Leishmania infantum chromosome 28. 37 1.6
AC140026_28(AC140026|pid:none) Medicago truncatula clone mth2-36... 37 2.0
AL021487_14(AL021487|pid:none) Caenorhabditis elegans YAC Y45F10... 37 2.0
AK066069_1(AK066069|pid:none) Oryza sativa Japonica Group cDNA c... 37 2.0
(P46579) RecName: Full=Probable tryptophanyl-tRNA synthetase, mi... 37 2.0
AF079183_1(AF079183|pid:none) Arabidopsis thaliana RING-H2 finge... 37 2.0
(Q865W2) RecName: Full=Tripartite motif-containing protein 50; ... 37 2.0
AB008264_13(AB008264|pid:none) Arabidopsis thaliana genomic DNA,... 37 2.0
(Q5D7I6) RecName: Full=Tripartite motif-containing protein 5; ... 37 2.0
AY085253_1(AY085253|pid:none) Arabidopsis thaliana clone 141890 ... 37 2.0
BC078617_1(BC078617|pid:none) Xenopus laevis MGC85578 protein, m... 37 2.0
CT005266_136(CT005266|pid:none) Leishmania major strain Friedlin... 37 2.0
AB128049_72(AB128049|pid:none) Macaca mulatta genes, MHC class I... 37 2.7
(Q12899) RecName: Full=Tripartite motif-containing protein 26; A... 37 2.7
(O76064) RecName: Full=E3 ubiquitin-protein ligase RNF8; ... 37 2.7
AK298319_1(AK298319|pid:none) Homo sapiens cDNA FLJ50824 complet... 37 2.7
AL662832_4(AL662832|pid:none) Human DNA sequence from clone XXba... 37 2.7
AF446007_1(AF446007|pid:none) Dictyostelium discoideum MEK1 inte... 37 2.7
BT035302_1(BT035302|pid:none) Zea mays full-length cDNA clone ZM... 37 2.7
BT029207_1(BT029207|pid:none) Arabidopsis thaliana At1g55255 mRN... 37 2.7
AL662832_2(AL662832|pid:none) Human DNA sequence from clone XXba... 37 2.7
AC116330_21(AC116330|pid:none) Dictyostelium discoideum chromoso... 37 2.7
AP009553_10(AP009553|pid:none) Sus scrofa genomic DNA, chromosom... 37 2.7
(Q7YR34) RecName: Full=Tripartite motif-containing protein 26; A... 37 2.7
AX881817_1(AX881817|pid:none) Sequence 16722 from Patent EP10746... 37 2.7
AY120743_1(AY120743|pid:none) Arabidopsis thaliana putative prot... 36 3.5
CR548612_300(CR548612|pid:none) Paramecium tetraurelia macronucl... 36 3.5
AC008167_1(AC008167|pid:none) Homo sapiens BAC clone RP11-172O13... 36 3.5
AB005246_13(AB005246|pid:none) Arabidopsis thaliana genomic DNA,... 36 3.5
AC006248_7(AC006248|pid:none) Arabidopsis thaliana chromosome 2 ... 36 3.5
AK065626_1(AK065626|pid:none) Oryza sativa Japonica Group cDNA c... 36 3.5
BX548047_1(BX548047|pid:none) Zebrafish DNA sequence from clone ... 36 3.5
AY810329_1(AY810329|pid:none) Schistosoma japonicum SJCHGC04285 ... 36 3.5
AF099919_8(AF099919|pid:none) Caenorhabditis elegans cosmid F40G... 36 3.5
BC153418_1(BC153418|pid:none) Danio rerio zgc:173666, mRNA (cDNA... 36 3.5
T23460(T23460)hypothetical protein K08E3.7 - Caenorhabditis eleg... 36 3.5
AB026648_13(AB026648|pid:none) Arabidopsis thaliana genomic DNA,... 36 3.5
AP003450_26(AP003450|pid:none) Oryza sativa Japonica Group genom... 36 3.5
FN392319_143(FN392319|pid:none) Pichia pastoris GS115 chromosome... 36 3.5
T25523(T25523) hypothetical protein C06A5.8 - Caenorhabditis ele... 36 3.5
AM473198_1(AM473198|pid:none) Vitis vinifera contig VV78X021532.... 36 3.5
AK171019_1(AK171019|pid:none) Mus musculus NOD-derived CD11c +ve... 36 4.6
AK243689_1(AK243689|pid:none) Oryza sativa Japonica Group cDNA, ... 36 4.6
(Q5D7I1) RecName: Full=Tripartite motif-containing protein 5; ... 36 4.6
AF230396_1(AF230396|pid:none) Mus musculus tripartite motif prot... 36 4.6
AM462015_2(AM462015|pid:none) Vitis vinifera contig VV78X029871.... 36 4.6
(P24271) RecName: Full=V(D)J recombination-activating protein 1;... 36 4.6
T25602(T25602) hypothetical protein C32E8.1 - Caenorhabditis ele... 36 4.6
AP007175_549(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 36 4.6
AK148247_1(AK148247|pid:none) Mus musculus B16 F10Y cells cDNA, ... 36 4.6
(P62603) RecName: Full=Tripartite motif-containing protein 26; A... 36 4.6
AP008230_128(AP008230|pid:none) Desulfitobacterium hafniense Y51... 36 4.6
(Q5ACW2) RecName: Full=Pre-mRNA-splicing factor CWC24; 36 4.6
CP001336_66(CP001336|pid:none) Desulfitobacterium hafniense DCB-... 36 4.6
AC024791_32(AC024791|pid:none) Caenorhabditis elegans cosmid Y47... 36 4.6
AC135462_17(AC135462|pid:none) Medicago truncatula clone mth2-35... 36 4.6
CR382135_214(CR382135|pid:none) Debaryomyces hansenii strain CBS... 36 4.6
CR956641_5(CR956641|pid:none) Mouse DNA sequence from clone RP23... 36 4.6
AM462788_3(AM462788|pid:none) Vitis vinifera contig VV78X037236.... 36 4.6
AM494965_200(AM494965|pid:none) Leishmania braziliensis chromoso... 36 4.6
AE016820_82(AE016820|pid:none) Ashbya gossypii (= Eremothecium g... 35 6.0
AK117391_1(AK117391|pid:none) Arabidopsis thaliana At3g47990 mRN... 35 6.0
CU633897_287(CU633897|pid:none) Podospora anserina genomic DNA c... 35 6.0
(Q9BRZ2) RecName: Full=Tripartite motif-containing protein 56; A... 35 6.0
DQ336954_11(DQ336954|pid:none) Glycine max cultivar Williams 82 ... 35 6.0
AC105773_4(AC105773|pid:none) Oryza sativa (japonica cultivar-gr... 35 6.0
AY646198_1(AY646198|pid:none) Aotus trivirgatus TRIM5/cyclophili... 35 6.0
AK071468_1(AK071468|pid:none) Oryza sativa Japonica Group cDNA c... 35 6.0
AF381284_1(AF381284|pid:none) Homo sapiens parkin isoform mRNA, ... 35 6.0
BC011882_1(BC011882|pid:none) Homo sapiens tripartite motif-cont... 35 6.0
(Q5R4I2) RecName: Full=E3 ubiquitin-protein ligase RNF8; ... 35 6.0
AB170198_1(AB170198|pid:none) Macaca fascicularis brain cDNA clo... 35 6.0
FN357321_37(FN357321|pid:none) Schistosoma mansoni genome sequen... 35 6.0
AK066238_1(AK066238|pid:none) Oryza sativa Japonica Group cDNA c... 35 6.0
AL732334_5(AL732334|pid:none) Oryza sativa genomic DNA, chromoso... 35 6.0
CP001576_126(CP001576|pid:none) Micromonas sp. RCC299 chromosome... 35 6.0
AK092927_1(AK092927|pid:none) Homo sapiens cDNA FLJ35608 fis, cl... 35 6.0
CP000496_62(CP000496|pid:none) Pichia stipitis CBS 6054 chromoso... 35 6.0
(Q2HJ46) RecName: Full=E3 ubiquitin-protein ligase RNF8; ... 35 6.0
AL022223_17(AL022223|pid:none) Arabidopsis thaliana DNA chromoso... 35 7.8
(Q5D7I0) RecName: Full=Tripartite motif-containing protein 5; ... 35 7.8
AC004138_14(AC004138|pid:none) Arabidopsis thaliana chromosome 2... 35 7.8
(B1AUE5) RecName: Full=Peroxisome biogenesis factor 10; AltName:... 35 7.8
AK108026_1(AK108026|pid:none) Oryza sativa Japonica Group cDNA c... 35 7.8
EF145964_1(EF145964|pid:none) Populus trichocarpa clone WS0114_J... 35 7.8
BT068694_1(BT068694|pid:none) Zea mays full-length cDNA clone ZM... 35 7.8
(Q6INB3) RecName: Full=RING finger protein 182; &BC072370_1(BC0... 35 7.8
BX548047_4(BX548047|pid:none) Zebrafish DNA sequence from clone ... 35 7.8
T21295(T21295) hypothetical protein F23B2.10 - Caenorhabditis el... 35 7.8
EU124697_1(EU124697|pid:none) Macaca mulatta TRIM22 (TRIM22) mRN... 35 7.8
FN313814_1(FN313814|pid:none) Schistosoma japonicum isolate Anhu... 35 7.8
CR760703_1(CR760703|pid:none) Xenopus tropicalis finished cDNA, ... 35 7.8
AK341832_1(AK341832|pid:none) Acyrthosiphon pisum ACYPI000911 mR... 35 7.8
AY740614_1(AY740614|pid:none) Saimiri boliviensis boliviensis TR... 35 7.8
(Q5D7H8) RecName: Full=Tripartite motif-containing protein 5; ... 35 7.8
EF083782_1(EF083782|pid:none) Picea sitchensis clone WS02722_L17... 35 7.8
>(Q9SKC4) RecName: Full=Probable E3 ubiquitin-protein ligase ARI10;
EC=6.3.2.-; AltName: Full=ARIADNE-like protein
ARI10; AltName: Full=Protein ariadne homolog 10;
&AC006533_22(AC006533|pid:none)
&AJ510213_1(AJ510213|pid:none)
&DQ056560_1(DQ056560|pid:none) &G84724(G84724)
Length = 514
Score = 137 bits (346), Expect = 9e-31
Identities = 76/227 (33%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Frame = +2
Query: 737 EEPVECKICYMEYDQSNEVFTLECDHVYCFDCITEHLRILITEGR-VLDISCPHPQCKKE 913
E ++C IC+ Y + E+ ++ C H YC C T ++ I +G L + CP P C
Sbjct: 116 EVDIQCGICFESYTRK-EIASVSCGHPYCKTCWTGYITTKIEDGPGCLRVKCPEPSCYAV 174
Query: 914 IKESEIYMLTNEKNWLKYQKFSMIASLKT-EPIKWCPTPDCDTPVRGGSERNPILNCPKC 1090
+ + I +T +K+ KY ++ + + ++ + +KWCP+P C+ V G + C C
Sbjct: 175 VGQDMIDEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCECAVEFGESSGYDVAC-LC 233
Query: 1091 SNDFCWICGEYSHEGAKCGTEAMELQGRKNKSIESAATAYIDFLESNKHFV----KPCPT 1258
S FCW C E +H C T + + +++S NK+++ KPCP
Sbjct: 234 SYRFCWNCSEDAHSPVDCETVSKWIFKNQDES-------------ENKNWILANSKPCPK 280
Query: 1259 CKSHIEKHDGCNHMTC-INCQHQFCWLCMNPYQSGHYSSNEYPECFD 1396
CK IEK GCNHMTC +C H+FCW+C Y S HY+ N Y E D
Sbjct: 281 CKRPIEKSHGCNHMTCSASCGHRFCWICGKSY-SDHYACNNYVEDAD 326
Score = 40.8 bits (94), Expect = 0.14
Identities = 42/188 (22%), Positives = 67/188 (35%), Gaps = 2/188 (1%)
Frame = +2
Query: 662 EKKVLRQYIK--LKKEMEDRKKVSTKLEEPVECKICYMEYDQSNEVFTLECDHVYCFDCI 835
EKK +Y + L+ +ED KK+ EC + + E S C + +C++C
Sbjct: 185 EKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCECAVEFGE--SSGYDVACLCSYRFCWNCS 242
Query: 836 TEHLRILITEGRVLDISCPHPQCKKEIKESEIYMLTNEKNWLKYQKFSMIASLKTEPIKW 1015
+ +D K ESE KNW+ +A+ K
Sbjct: 243 ED-------AHSPVDCETVSKWIFKNQDESE------NKNWI-------LANSK------ 276
Query: 1016 CPTPDCDTPVRGGSERNPILNCPKCSNDFCWICGEYSHEGAKCGTEAMELQGRKNKSIES 1195
P P C P+ N + C + FCWICG+ + C + K ++S
Sbjct: 277 -PCPKCKRPIEKSHGCNHMTCSASCGHRFCWICGKSYSDHYACNNYVEDADHDKRTLLQS 335
Query: 1196 AATAYIDF 1219
Y +
Sbjct: 336 EIKRYTHY 343
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,103,367,012
Number of extensions: 39366441
Number of successful extensions: 133616
Number of sequences better than 10.0: 507
Number of HSP's gapped: 132111
Number of HSP's successfully gapped: 531
Length of query: 531
Length of database: 1,051,180,864
Length adjustment: 133
Effective length of query: 398
Effective length of database: 620,718,517
Effective search space: 247045969766
Effective search space used: 247045969766
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
1 |
| AF (FL, S) |
1 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
1 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |