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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U13926-1
Contig ID Contig-U13926-1
Contig update 2002.12.18
Contig sequence 
>Contig-U13926-1 (Contig-U13926-1Q) /CSM_Contig/Contig-U13926-1Q.Seq.d
TTTTTAATCATACAAATACAATATATCAAAATAAAATGAGATTATTATTA
GCCCTCTTTTTCGTTCTTTGCTTTAGTTTCCCCATCTTTCACCCAAGTTT
GGTCAAATTGTGGTACTGCTGCCGATAAATTCCAAATTACCAATGTAGTA
TTAGACCCACCAACACCAGTTAAAGGACAAGATATCACAATCAGTGCATC
AGGTATTCTCGATGAAACCGTCACTGGTGGAAATGTTGCCGTTAAAGTCA
AATATGGTTTCATTACACTTATCAATGAAAATGTTTCTATTTGCAGTTCT
CAAGACCCATTAGCATGCCCAATTGCTGCTGGTGATTACCAAAAGAATAT
GACCGAAATGATTCCATCTGATGCTCCATCAGGTAAATACACTGGTAACG
TTGTTATCACCGATCAAAACAATGCTGAAATCGCCTGTATTGATGTTGAT
ATTAACTTGTAAACGAATAAAATAAAATAAAATAAAATAAAAACACACCA
TCGATAAATTATTTATAAATTAAACACACCATTATACACACACACACATA
TGTGTGTGTATATATTTTTTTATTTATTTCCAAAATTAATTAATCAGTAC
ATTTAGTTTGTGGTATTTGGGTTGAATTTGGGAAATGACGTGGTTGATTG
AATAGTTGTTGACCAGTTTCAAATGTAATATATGTAATTGAGGTGACTTT
ATTCTTAATTGGATTATGAGTTAACTCGATTACTCTTGCACCTCTTTCCC
AAGTTCCATAACCACCATAACCACTATGTCTACCATAACACATTTTAATA
TTATCAAATATTGAGCAGAAATCGTTTCCATGATTATGACCCACCGATAT
CATTCTAATTCTACCAATTTCAACAAACTTTTTAAAAAGTCCCTCATTAG
TTTTTTTGACATGCGATTGAGTCATTATTAAATCCAAAGCAAACTCCGTA
ATTCCATACTAGCATATATTCTTGTAATGGTATATGAAAGAAGGCACCTT
CCCATAATGGTAGTTTATCATTTTCATATTTTAATGTTTCATTTTCGTAC
CATTGAATTTGCTCCTTTGTAATGAATGTATTGCATTGATAGCCATTTCC
AAATTCTCTGTTTCTTTGGTTTTTACAATCATTTTCACCATCGCCAGAGT
CAAATAGCCATAATGTCGATAATATTCTGTCATTTTCATTTCCATAGATA
TTTAAATTGTAATTTGATACACCAGGTATTGAGATTGGACCAAGTTTAGA
AAGAGAGCCTAGTTTAATGTCTAATGAGATTAAGTCATATCTTGTACCAT
TATCATTTGAAGATAGGGTCATCATGATTTCCAAATGTGATTGCCCATGG
TATATTTCTAGTTTTTGCCACATTGATTGCATTCTCCCAATATTTTGACA
CATTGCCATTAATATTATTACCAGTAATTAAATCACCTGTAAATAATATT
AAATCAACATTTCCTTCTTTATCAATTATTTTATTCATCACAGCAGTACT
ATTTATATCTTGTTCTTTACCCCATGCCTCATTTTCACCTTCTCCAAAAT
GTAAATCTGTAAATTGAATAATTTTAAATTTATTATTTTTATTAAATCTT
AATTTATTTTTATTTTCATTATTATCTTTATCAATATTAATTTTGATTGT
TATATGATTATTATTATTATTATTATTATTATTATTTTTTATTATTGATA
AACTATCGGTAATTTGAACAAATAAATTTAAAAAAATCATTACTGTTATT
AGAGAAATTATTT
Gap no gap
Contig length 1763
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 629813
End point 631576
Strand (PLUS/MINUS) PLUS
Number of clones 22
Number of EST 32
Link to clone list U13926
List of clone(s) 

est1=VHF348F,1,529
est2=VHF348Z,1,463
est3=VSI354Z,1,501
est4=VSI417F,12,532
est5=VSI417Z,12,501
est6=VSI354F,13,521
est7=VSA770E,18,535
est8=VSE688E,18,522
est9=VSJ851E,18,509
est10=VSJ841F,19,521
est11=VSJ841Z,19,473
est12=VSJ452F,23,532
est13=VSJ452Z,23,510
est14=VSG156Z,28,511
est15=VSG174F,28,532
est16=VSG174Z,28,500
est17=VSK373F,30,516
est18=VSK373Z,30,501
est19=VSJ516F,33,532
est20=VSJ516Z,33,518
est21=VSA508Z,35,528
est22=VSA650E,54,525
est23=VSA545Z,72,558
est24=CFA339Z,206,763
est25=AFF590Z,293,437
est26=VSB408Z,303,522
est27=VSC442E,335,489
est28=VFJ728Z,532,1175
est29=VFL171Z,573,1187
est30=CFI840Z,633,1120
est31=CFA339F,1154,1672
est32=CFI840F,1207,1763
Translated Amino Acid sequence 
fliiqiqyikik*dyy*PSFSFFALVSPSFTQVWSNCGTAADKFQITNVVLDPPTPVKGQ
DITISASGILDETVTGGNVAVKVKYGFITLINENVSICSSQDPLACPIAAGDYQKNMTEM
IPSDAPSGKYTGNVVITDQNNAEIACIDVDINL*tnkik*nkikthhr*iiyklntplyt
hthmcvyiffylfpklinqyi*fvvfglnlgndvvd*ivvdqfqm*ym*lr*lys*ldye
ltrlllhlfpkfhnhhnhyvyhntf*yyqilsrnrfhdydppisf*fyqfqqtf*kvph*
ff*haiesllnpkqtp*fhtsiyscngi*kkapshngslsfsyfnvsfsyh*icsfvmnv
lh**pfpnslflwflqsfspspesnshnvdnilsfsfp*ifkl*fdtpgieigpslerep
slmsneiksylvplsfedrvimiskcdcpwyissfchidcilpif*hiainiitsn*itc
k*y*inisffinyfihhsstiyilfftpcliftfskm*icklnnfkfiifiks*fififi
iifininfdcymiiiiiiiiiifyy**tignlnk*i*knhycy*rny
Translated Amino Acid sequence (All Frames) 
Frame A:
fliiqiqyikik*dyy*PSFSFFALVSPSFTQVWSNCGTAADKFQITNVVLDPPTPVKGQ
DITISASGILDETVTGGNVAVKVKYGFITLINENVSICSSQDPLACPIAAGDYQKNMTEM
IPSDAPSGKYTGNVVITDQNNAEIACIDVDINL*tnkik*nkikthhr*iiyklntplyt
hthmcvyiffylfpklinqyi*fvvfglnlgndvvd*ivvdqfqm*ym*lr*lys*ldye
ltrlllhlfpkfhnhhnhyvyhntf*yyqilsrnrfhdydppisf*fyqfqqtf*kvph*
ff*haiesllnpkqtp*fhtsiyscngi*kkapshngslsfsyfnvsfsyh*icsfvmnv
lh**pfpnslflwflqsfspspesnshnvdnilsfsfp*ifkl*fdtpgieigpslerep
slmsneiksylvplsfedrvimiskcdcpwyissfchidcilpif*hiainiitsn*itc
k*y*inisffinyfihhsstiyilfftpcliftfskm*icklnnfkfiifiks*fififi
iifininfdcymiiiiiiiiiifyy**tignlnk*i*knhycy*rny


Frame B:
f*sykynisk*neiiisplfrsll*fphlspkfgqivvllpinsklpm*y*thqhqlkdk
isqsvhqvfsmkpslvemlplksnmvslhlsmkmflfavlkth*haqlllvitkri*pk*
fhlmlhqvntlvtllspiktmlkspvlmliltckrik*nkik*khtidklfin*thhyth
thicvciyffiyfqn*listfslwylg*iwemtwlie*lltsfkcnicn*gdfilnwims
*ldysctsfpssittittmstithfniiky*aeivsmimthryhsnstnfnklfkkslis
ffdmrlshy*iqsklrnsilayilvmvyerrhlpimvvyhfhilmfhfrtiefapl**my
cidshfqilcffgfynhfhhrqsqiaimsiifchfhfhrylncnlihqvlrldqv*kesl
v*clmrlshilyhyhlkigss*fpnviahgiflvfatliafsqyfdtlplillpvikspv
nnikstfpslsiilfitavlfiscslphasfspspkcksvn*iilnllfllnlnlflfsl
lslsililivi*lllllllllffiidklsvi*tnkfkkiitvireii


Frame C:
fnhtntiyqnkmrlllalffvlcfsfpifhpslvklwyccr*ipnyqcsirptnts*rtr
yhnqcirysr*nrhwwkccr*sqiwfhytyq*kcfylqfsrpismpnccw*lpkeydrnd
si*csir*ihw*rcyhrskqc*nrly*c*y*lvne*nkik*nkntpsinyl*ikhtiiht
htyvcvyiflfiskin*svhlvcgiwvefgk*rg*lnsc*pvsnviyvievtlfligl*v
nsitlaplsqvp*pp*plclp*hililsnieqksfp*l*ptdiililpistnflkspslv
fltcd*viikskansvipy*hifl*wymkegtfp*w*fiifif*cfifvplnlllcneci
aliaiskfsvslvftiiftiarvk*p*cr*ysvifisidi*ivi*ytry*dwtkfrkra*
fnv**d*visctiii*r*ghhdfqm*lpmvyf*flph*lhspnilthch*yyyq*lnhl*
iilnqhfllyqlfyssqqyylylvlypmphfhllqnvnl*ie*f*iyyfy*iliyfyfhy
ylyqy*f*llydyyyyyyyyyflllinyr*feqinlkkslllleklf
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U13926-1 (Contig-U13926-1Q)
/CSM_Contig/Contig-U13926-1Q.Seq.d
         (1763 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U13926-1 (Contig-U13926-1Q) /CSM_Contig/Conti...  1895  0.0
Contig-U05736-1 (Contig-U05736-1Q) /CSM_Contig/Conti...    38  0.032
Contig-U14849-1 (Contig-U14849-1Q) /CSM_Contig/Conti...    36  0.13
Contig-U13969-1 (Contig-U13969-1Q) /CSM_Contig/Conti...    36  0.13
Contig-U13525-1 (Contig-U13525-1Q) /CSM_Contig/Conti...    36  0.13
Contig-U13019-1 (Contig-U13019-1Q) /CSM_Contig/Conti...    36  0.13
Contig-U11545-1 (Contig-U11545-1Q) /CSM_Contig/Conti...    36  0.13
Contig-U10375-1 (Contig-U10375-1Q) /CSM_Contig/Conti...    36  0.13
Contig-U09476-1 (Contig-U09476-1Q) /CSM_Contig/Conti...    36  0.13
Contig-U09392-1 (Contig-U09392-1Q) /CSM_Contig/Conti...    36  0.13

>Contig-U13926-1 (Contig-U13926-1Q) /CSM_Contig/Contig-U13926-1Q.Seq.d
          Length = 1763

 Score = 1895 bits (956), Expect = 0.0
 Identities = 984/998 (98%)
 Strand = Plus / Plus

                                                                        
Query: 549  tatgtgtgtgtatatannnnnnnatttatttccaaaattaattaatcagtacatttagtt 608
            ||||||||||||||||       |||||||||||||||||||||||||||||||||||||
Sbjct: 549  tatgtgtgtgtatatatttttttatttatttccaaaattaattaatcagtacatttagtt 608

                                                                        
Query: 609  tgtggtatttgggttgaatttgggaaatgacgtggttgattgaatagttgttgaccagtt 668
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609  tgtggtatttgggttgaatttgggaaatgacgtggttgattgaatagttgttgaccagtt 668

                                                                        
Query: 669  tcaaatgtaatatatgtaattgaggtgactttattcttaattggattatgagttaactcg 728
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669  tcaaatgtaatatatgtaattgaggtgactttattcttaattggattatgagttaactcg 728

                                                                        
Query: 729  attactcttgcacctctttcccaagttccataaccaccataaccactatgtctaccataa 788
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729  attactcttgcacctctttcccaagttccataaccaccataaccactatgtctaccataa 788

                                                                        
Query: 789  cacattttaatattatcaaatattgagcagaaatcgtttccatgattatgacccaccgat 848
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789  cacattttaatattatcaaatattgagcagaaatcgtttccatgattatgacccaccgat 848

                                                                        
Query: 849  atcattctaattctaccaatttcaacaaactttttaaaaagtccctcattagnnnnnnng 908
            ||||||||||||||||||||||||||||||||||||||||||||||||||||       |
Sbjct: 849  atcattctaattctaccaatttcaacaaactttttaaaaagtccctcattagtttttttg 908

                                                                        
Query: 909  acatgcgattgagtcattattaaatccaaagcaaactccgtaattccatactagcatata 968
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909  acatgcgattgagtcattattaaatccaaagcaaactccgtaattccatactagcatata 968

                                                                        
Query: 969  ttcttgtaatggtatatgaaagaaggcaccttcccataatggtagtttatcattttcata 1028
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969  ttcttgtaatggtatatgaaagaaggcaccttcccataatggtagtttatcattttcata 1028

                                                                        
Query: 1029 ttttaatgtttcattttcgtaccattgaatttgctcctttgtaatgaatgtattgcattg 1088
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 ttttaatgtttcattttcgtaccattgaatttgctcctttgtaatgaatgtattgcattg 1088

                                                                        
Query: 1089 atagccatttccaaattctctgtttctttggtttttacaatcattttcaccatcgccaga 1148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1089 atagccatttccaaattctctgtttctttggtttttacaatcattttcaccatcgccaga 1148

                                                                        
Query: 1149 gtcaaatagccataatgtcgataatattctgtcattttcatttccatagatatttaaatt 1208
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1149 gtcaaatagccataatgtcgataatattctgtcattttcatttccatagatatttaaatt 1208

                                                                        
Query: 1209 gtaatttgatacaccaggtattgagattggaccaagtttagaaagagagcctagtttaat 1268
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1209 gtaatttgatacaccaggtattgagattggaccaagtttagaaagagagcctagtttaat 1268

                                                                        
Query: 1269 gtctaatgagattaagtcatatcttgtaccattatcatttgaagatagggtcatcatgat 1328
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1269 gtctaatgagattaagtcatatcttgtaccattatcatttgaagatagggtcatcatgat 1328

                                                                        
Query: 1329 ttccaaatgtgattgcccatggtatatttctagtttttgccacattgattgcattctccc 1388
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1329 ttccaaatgtgattgcccatggtatatttctagtttttgccacattgattgcattctccc 1388

                                                                        
Query: 1389 aatattttgacacattgccattaatattattaccagtaattaaatcacctgtaaataata 1448
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1389 aatattttgacacattgccattaatattattaccagtaattaaatcacctgtaaataata 1448

                                                                        
Query: 1449 ttaaatcaacatttccttctttatcaattattttattcatcacagcagtactatttatat 1508
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1449 ttaaatcaacatttccttctttatcaattattttattcatcacagcagtactatttatat 1508

                                                  
Query: 1509 cttgttctttaccccatgcctcattttcaccttctcca 1546
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 1509 cttgttctttaccccatgcctcattttcaccttctcca 1546


 Score =  922 bits (465), Expect = 0.0
 Identities = 465/465 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttttaatcatacaaatacaatatatcaaaataaaatgagattattattagccctctttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tttttaatcatacaaatacaatatatcaaaataaaatgagattattattagccctctttt 60

                                                                       
Query: 61  tcgttctttgctttagtttccccatctttcacccaagtttggtcaaattgtggtactgct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tcgttctttgctttagtttccccatctttcacccaagtttggtcaaattgtggtactgct 120

                                                                       
Query: 121 gccgataaattccaaattaccaatgtagtattagacccaccaacaccagttaaaggacaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gccgataaattccaaattaccaatgtagtattagacccaccaacaccagttaaaggacaa 180

                                                                       
Query: 181 gatatcacaatcagtgcatcaggtattctcgatgaaaccgtcactggtggaaatgttgcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatatcacaatcagtgcatcaggtattctcgatgaaaccgtcactggtggaaatgttgcc 240

                                                                       
Query: 241 gttaaagtcaaatatggtttcattacacttatcaatgaaaatgtttctatttgcagttct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gttaaagtcaaatatggtttcattacacttatcaatgaaaatgtttctatttgcagttct 300

                                                                       
Query: 301 caagacccattagcatgcccaattgctgctggtgattaccaaaagaatatgaccgaaatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caagacccattagcatgcccaattgctgctggtgattaccaaaagaatatgaccgaaatg 360

                                                                       
Query: 361 attccatctgatgctccatcaggtaaatacactggtaacgttgttatcaccgatcaaaac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attccatctgatgctccatcaggtaaatacactggtaacgttgttatcaccgatcaaaac 420

                                                        
Query: 421 aatgctgaaatcgcctgtattgatgttgatattaacttgtaaacg 465
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aatgctgaaatcgcctgtattgatgttgatattaacttgtaaacg 465


 Score = 91.7 bits (46), Expect = 2e-18
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1697 gataaactatcggtaatttgaacaaataaatttnnnnnnntcattactgttattagagaa 1756
            |||||||||||||||||||||||||||||||||       ||||||||||||||||||||
Sbjct: 1697 gataaactatcggtaatttgaacaaataaatttaaaaaaatcattactgttattagagaa 1756

                   
Query: 1757 attattt 1763
            |||||||
Sbjct: 1757 attattt 1763


 Score = 83.8 bits (42), Expect = 6e-16
 Identities = 42/42 (100%)
 Strand = Plus / Plus

                                                     
Query: 494 cacaccatcgataaattatttataaattaaacacaccattat 535
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 cacaccatcgataaattatttataaattaaacacaccattat 535


>Contig-U05736-1 (Contig-U05736-1Q) /CSM_Contig/Contig-U05736-1Q.Seq.d
          Length = 1102

 Score = 38.2 bits (19), Expect = 0.032
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 508  attatttataaattaaaca 526
            |||||||||||||||||||
Sbjct: 1091 attatttataaattaaaca 1073


>Contig-U14849-1 (Contig-U14849-1Q) /CSM_Contig/Contig-U14849-1Q.Seq.d
          Length = 956

 Score = 36.2 bits (18), Expect = 0.13
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 380 caggtaaatacactggta 397
           ||||||||||||||||||
Sbjct: 148 caggtaaatacactggta 165


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 22,277
Number of Sequences: 6905
Number of extensions: 22277
Number of successful extensions: 2478
Number of sequences better than 10.0: 249
length of query: 1763
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1747
effective length of database: 5,564,391
effective search space: 9720991077
effective search space used: 9720991077
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.12.15
Homology vs DNA 
Query= Contig-U13926-1 (Contig-U13926-1Q) /CSM_Contig/Contig-U13926-1Q.Seq.d
         (1763 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ434026) Dictyostelium discoideum cDNA clone:ddv23m17, 3' ...   644   0.0    3
(BJ432954) Dictyostelium discoideum cDNA clone:ddv20h07, 3' ...   597   0.0    2
(BJ371773) Dictyostelium discoideum cDNA clone:ddc1n09, 3' e...   595   0.0    3
(AU268563) Dictyostelium discoideum vegetative cDNA clone:VS...   898   0.0    1
(BJ421029) Dictyostelium discoideum cDNA clone:ddv41p11, 5' ...   789   0.0    3
(AU268662) Dictyostelium discoideum vegetative cDNA clone:VS...   789   0.0    3
(AU268663) Dictyostelium discoideum vegetative cDNA clone:VS...   789   0.0    3
(AU268562) Dictyostelium discoideum vegetative cDNA clone:VS...   789   0.0    3
(BJ439749) Dictyostelium discoideum cDNA clone:ddv41p11, 3' ...   765   0.0    3
(AU261725) Dictyostelium discoideum vegetative cDNA clone:VS...   789   0.0    2
(AU269941) Dictyostelium discoideum vegetative cDNA clone:VS...   789   0.0    2
(AU266082) Dictyostelium discoideum vegetative cDNA clone:VS...   789   0.0    2
(AU270554) Dictyostelium discoideum vegetative cDNA clone:VS...   789   0.0    2
(AU269942) Dictyostelium discoideum vegetative cDNA clone:VS...   789   0.0    2
(AU266054) Dictyostelium discoideum vegetative cDNA clone:VS...   789   0.0    2
(AU270574) Dictyostelium discoideum vegetative cDNA clone:VS...   789   0.0    2
(AU270555) Dictyostelium discoideum vegetative cDNA clone:VS...   789   0.0    2
(AU271086) Dictyostelium discoideum vegetative cDNA clone:VS...   789   0.0    2
(AU271087) Dictyostelium discoideum vegetative cDNA clone:VS...   789   0.0    2
(AU263297) Dictyostelium discoideum vegetative cDNA clone:VS...   789   0.0    2
(AU270575) Dictyostelium discoideum vegetative cDNA clone:VS...   783   0.0    2
(AU270037) Dictyostelium discoideum vegetative cDNA clone:VS...   789   0.0    2
(AU270038) Dictyostelium discoideum vegetative cDNA clone:VS...   789   0.0    2
(AU266083) Dictyostelium discoideum vegetative cDNA clone:VS...   743   0.0    3
(AU261525) Dictyostelium discoideum vegetative cDNA clone:VS...   767   0.0    2
(AU261632) Dictyostelium discoideum vegetative cDNA clone:VS...   781   0.0    1
(AU261552) Dictyostelium discoideum vegetative cDNA clone:VS...   767   0.0    1
(BJ361721) Dictyostelium discoideum cDNA clone:ddc18p10, 5' ...   454   0.0    2
(BJ375370) Dictyostelium discoideum cDNA clone:ddc18p10, 3' ...   490   0.0    4
(BJ358413) Dictyostelium discoideum cDNA clone:ddc1n09, 5' e...   597   0.0    3
(AU262002) Dictyostelium discoideum vegetative cDNA clone:VS...   317   8e-82  1
(AU262566) Dictyostelium discoideum vegetative cDNA clone:VS...   260   2e-64  1
(BJ340363) Dictyostelium discoideum cDNA clone:dda12c23, 3' ...   141   3e-60  2
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423...    62   8e-05  1
(BJ329320) Dictyostelium discoideum cDNA clone:dda24e16, 5' ...    62   8e-05  1
(BJ361025) Dictyostelium discoideum cDNA clone:ddc9n09, 5' e...    56   0.005  1
(CU606925) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    42   0.050  6
(AC005139) Plasmodium falciparum chromosome 12, *** SEQUENCI...    42   0.10   8
(BQ555331) H4033E02-5 NIA Mouse 7.4K cDNA Clone Set Mus musc...    40   0.20   3
(AC188592) Pan troglodytes BAC clone CH251-462C24 from chrom...    50   0.29   1
(AC146252) Pan troglodytes BAC clone RP43-31D18 from chromos...    50   0.29   1
(AC005007) Homo sapiens BAC clone GS1-51M12 from 7p21-p22, c...    50   0.29   1
(AC120968) Rattus norvegicus clone CH230-175F8, WORKING DRAF...    50   0.29   1
(AC219390) Bos taurus clone CH240-338P7, WORKING DRAFT SEQUE...    50   0.29   1
(AC190185) Pan troglodytes chromosome 7 clone CH251-579F17, ...    50   0.29   1
(AC023101) Homo sapiens chromosome 7 clone RP11-348B22 map 7...    50   0.29   1
(BU018964) QHE1f01.yg.ab1 QH_EFGHJ sunflower RHA280 Helianth...    50   0.29   1
(CZ531509) SRAA-aac73c09.g1 Strongyloides ratti whole genome...    46   0.49   2
(EI462332) PV_GBa0066F13.r PV_GBa Phaseolus vulgaris genomic...    38   0.50   3
(EJ647132) 1092344027024 Global-Ocean-Sampling_GS-30-02-01-1...    48   0.53   2
(AM636080) Entamoeba dispar GSS, clone dispar32d06.p1k.            48   0.57   2
(EJ862869) 1093018221489 Global-Ocean-Sampling_GS-30-02-01-1...    48   0.61   2
(AC189719) Canis familiaris, clone XX-228B21, complete seque...    38   0.62   2
(CR548623) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    34   0.62   2
(BX294119) Zebrafish DNA sequence from clone CH211-113D22 in...    34   0.62   2
(CE377583) tigr-gss-dog-17000362244466 Dog Library Canis lup...    34   1.1    3
(AC155988) Xenopus tropicalis clone ISB1-281C5, complete seq...    48   1.1    1
(AC149528) Xenopus tropicalis clone ISB-292P1, complete sequ...    48   1.1    1
(AC159493) Bos taurus clone CH240-74J19, WORKING DRAFT SEQUE...    48   1.1    1
(AC156007) Xenopus tropicalis clone ISB1-374D4, WORKING DRAF...    48   1.1    1
(AC110450) Rattus norvegicus clone CH230-32D8, *** SEQUENCIN...    48   1.1    1
(AC103493) Rattus norvegicus clone CH230-31C2, WORKING DRAFT...    48   1.1    1
(AC097089) Rattus norvegicus clone CH230-173B12, WORKING DRA...    48   1.1    1
(AC165468) Bos taurus clone CH240-155P5, *** SEQUENCING IN P...    48   1.1    1
(ER625014) 1093017574205 Global-Ocean-Sampling_GS-36-01-01-2...    48   1.1    1
(ER571924) 1093015795827 Global-Ocean-Sampling_GS-36-01-01-2...    48   1.1    1
(ER511727) 1093015453651 Global-Ocean-Sampling_GS-35-01-01-1...    48   1.1    1
(ER506193) 1093015422600 Global-Ocean-Sampling_GS-35-01-01-1...    48   1.1    1
(ER498712) 1093015391483 Global-Ocean-Sampling_GS-35-01-01-1...    48   1.1    1
(ER487540) 1093015307528 Global-Ocean-Sampling_GS-35-01-01-1...    48   1.1    1
(ER484250) 1093015287575 Global-Ocean-Sampling_GS-35-01-01-1...    48   1.1    1
(ER445884) 1092963828996 Global-Ocean-Sampling_GS-35-01-01-1...    48   1.1    1
(ER441571) 1092963815396 Global-Ocean-Sampling_GS-35-01-01-1...    48   1.1    1
(ER432494) 1092963783040 Global-Ocean-Sampling_GS-35-01-01-1...    48   1.1    1
(ER429272) 1092963770052 Global-Ocean-Sampling_GS-35-01-01-1...    48   1.1    1
(ER426725) 1092963756243 Global-Ocean-Sampling_GS-35-01-01-1...    48   1.1    1
(ER370105) 1093023032863 Global-Ocean-Sampling_GS-34-01-01-1...    48   1.1    1
(ER335528) 1092344301209 Global-Ocean-Sampling_GS-34-01-01-1...    48   1.1    1
(EK538265) 1095516042000 Global-Ocean-Sampling_GS-32-01-01-1...    48   1.1    1
(EK321212) 1095462430130 Global-Ocean-Sampling_GS-31-01-01-1...    48   1.1    1
(EK308686) 1095462389233 Global-Ocean-Sampling_GS-31-01-01-1...    48   1.1    1
(EK287205) 1095462316964 Global-Ocean-Sampling_GS-31-01-01-1...    48   1.1    1
(EK064971) 1092960111717 Global-Ocean-Sampling_GS-31-01-01-1...    48   1.1    1
(EK045213) 1092959546393 Global-Ocean-Sampling_GS-31-01-01-1...    48   1.1    1
(EJ925628) 1093018780604 Global-Ocean-Sampling_GS-30-02-01-1...    48   1.1    1
(EJ925208) 1093018778876 Global-Ocean-Sampling_GS-30-02-01-1...    48   1.1    1
(EJ899289) 1093018482386 Global-Ocean-Sampling_GS-30-02-01-1...    48   1.1    1
(EJ884153) 1093018409330 Global-Ocean-Sampling_GS-30-02-01-1...    48   1.1    1
(EJ880930) 1093018396447 Global-Ocean-Sampling_GS-30-02-01-1...    48   1.1    1
(EJ873403) 1093018357094 Global-Ocean-Sampling_GS-30-02-01-1...    48   1.1    1
(EJ868443) 1093018298243 Global-Ocean-Sampling_GS-30-02-01-1...    48   1.1    1
(EJ789895) 1093017371631 Global-Ocean-Sampling_GS-30-02-01-1...    48   1.1    1
(EJ775450) 1092995200363 Global-Ocean-Sampling_GS-30-02-01-1...    48   1.1    1
(EJ738025) 1092961214226 Global-Ocean-Sampling_GS-30-02-01-1...    48   1.1    1
(EJ692347) 1092956007398 Global-Ocean-Sampling_GS-30-02-01-1...    48   1.1    1
(EJ664347) 1092955035884 Global-Ocean-Sampling_GS-30-02-01-1...    48   1.1    1
(EJ659804) 1092955019466 Global-Ocean-Sampling_GS-30-02-01-1...    48   1.1    1
(EJ646693) 1092342079040 Global-Ocean-Sampling_GS-30-02-01-1...    48   1.1    1
(EJ641024) 1093011492555 Global-Ocean-Sampling_GS-29-01-01-1...    48   1.1    1
(EJ599206) 1092961124434 Global-Ocean-Sampling_GS-29-01-01-1...    48   1.1    1

>(BJ434026) Dictyostelium discoideum cDNA clone:ddv23m17, 3' end,
           single read.
          Length = 614

 Score =  644 bits (325), Expect(3) = 0.0
 Identities = 328/329 (99%)
 Strand = Plus / Plus


Query: 572 atttatttccaaaattaattaatcagtacatttagtttgtggtatttgggttgaatttgg 631
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40  atttatttccaaaattaattaatcagtacatttagtttgtggtatttgggttgaatttgg 99


Query: 632 gaaatgacgtggttgattgaatagttgttgaccagtttcaaatgtaatatatgtaattga 691
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 gaaatgacgtggttgattgaatagttgttgaccagtttcaaatgtaatatatgtaattga 159


Query: 692 ggtgactttattcttaattggattatgagttaactcgattactcttgcacctctttccca 751
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 ggtgactttattcttaattggattatgagttaactcgattactcttgcacctctttccca 219


Query: 752 agttccataaccaccataaccactatgtctaccataacacattttaatattatcaaatat 811
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 agttccataaccaccataaccactatgtctaccataacacattttaatattatcaaatat 279


Query: 812 tgagcagaaatcgtttccatgattatgacccaccgatatcattctaattctaccaatttc 871
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tgaacagaaatcgtttccatgattatgacccaccgatatcattctaattctaccaatttc 339


Query: 872 aacaaactttttaaaaagtccctcattag 900
           |||||||||||||||||||||||||||||
Sbjct: 340 aacaaactttttaaaaagtccctcattag 368

 Score =  476 bits (240), Expect(3) = 0.0
 Identities = 240/240 (100%)
 Strand = Plus / Plus


Query: 908  gacatgcgattgagtcattattaaatccaaagcaaactccgtaattccatactagcatat 967
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375  gacatgcgattgagtcattattaaatccaaagcaaactccgtaattccatactagcatat 434


Query: 968  attcttgtaatggtatatgaaagaaggcaccttcccataatggtagtttatcattttcat 1027
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435  attcttgtaatggtatatgaaagaaggcaccttcccataatggtagtttatcattttcat 494


Query: 1028 attttaatgtttcattttcgtaccattgaatttgctcctttgtaatgaatgtattgcatt 1087
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495  attttaatgtttcattttcgtaccattgaatttgctcctttgtaatgaatgtattgcatt 554


Query: 1088 gatagccatttccaaattctctgtttctttggtttttacaatcattttcaccatcgccag 1147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555  gatagccatttccaaattctctgtttctttggtttttacaatcattttcaccatcgccag 614

 Score = 32.2 bits (16), Expect(3) = 0.0
 Identities = 16/16 (100%)
 Strand = Plus / Plus


Query: 549 tatgtgtgtgtatata 564
           ||||||||||||||||
Sbjct: 17  tatgtgtgtgtatata 32

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,829,956,895
Number of extensions: 113645122
Number of successful extensions: 9481694
Number of sequences better than 10.0: 163
Length of query: 1763
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1739
Effective length of database: 97,308,875,965
Effective search space: 169220135303135
Effective search space used: 169220135303135
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7. 8
Homology vs Protein 
Query= Contig-U13926-1 (Contig-U13926-1Q) /CSM_Contig/Contig-U13926-1Q.Seq.d
         (1763 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54SZ8) RecName: Full=Putative phosphatidylglycerol/phosphatidy...   135   5e-30
AC116956_49(AC116956|pid:none) Dictyostelium discoideum chromoso...    66   3e-29
AE001437_2763(AE001437|pid:none) Clostridium acetobutylicum ATCC...    58   8e-26
CP000140_2943(CP000140|pid:none) Parabacteroides distasonis ATCC...    58   5e-24
CP000721_867(CP000721|pid:none) Clostridium beijerinckii NCIMB 8...    59   7e-24
(Q9LU72) RecName: Full=Probable inactive purple acid phosphatase...    56   2e-22
EU961980_1(EU961980|pid:none) Zea mays clone 239444 phosphatase ...    51   1e-21
AP006841_1757(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,...    56   2e-20
(Q9FMK9) RecName: Full=Probable inactive purple acid phosphatase...    59   1e-19
CP000139_1215(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,...    55   2e-19
AJ276267_1(AJ276267|pid:none) Cicer arietinum mRNA for putative ...    55   1e-18
AK318721_1(AK318721|pid:none) Arabidopsis thaliana AT5G57140 mRN...    56   2e-18
BT068240_1(BT068240|pid:none) Zea mays full-length cDNA clone ZM...    57   3e-18
CR931997_1417(CR931997|pid:none) Corynebacterium jeikeium K411 c...    51   1e-17
CR382134_218(CR382134|pid:none) Debaryomyces hansenii strain CBS...    50   2e-17
FN392321_1128(FN392321|pid:none) Pichia pastoris GS115 chromosom...    47   2e-17
AM434914_2(AM434914|pid:none) Vitis vinifera contig VV78X104792....    93   3e-17
CR382131_958(CR382131|pid:none) Yarrowia lipolytica strain CLIB1...    51   1e-16
CP000454_3206(CP000454|pid:none) Arthrobacter sp. FB24, complete...    46   1e-15
AE001437_1935(AE001437|pid:none) Clostridium acetobutylicum ATCC...    50   1e-15
AP007150_253(AP007150|pid:none) Aspergillus oryzae RIB40 genomic...    44   1e-15
(Q54KP7) RecName: Full=Putative phosphatidylglycerol/phosphatidy...    87   1e-15
AK107393_1(AK107393|pid:none) Oryza sativa Japonica Group cDNA c...    84   2e-15
AE016815_203(AE016815|pid:none) Ashbya gossypii (= Eremothecium ...    48   2e-15
AM270049_19(AM270049|pid:none) Aspergillus niger contig An03c008...    46   2e-15
CU928169_453(CU928169|pid:none) Kluyveromyces thermotolerans str...    46   4e-15
CP000497_350(CP000497|pid:none) Pichia stipitis CBS 6054 chromos...    43   9e-15
(Q4P580) RecName: Full=Phosphatidylglycerol/phosphatidylinositol...    84   1e-14
AM920437_259(AM920437|pid:none) Penicillium chrysogenum Wisconsi...    43   2e-13
AE015929_1104(AE015929|pid:none) Staphylococcus epidermidis ATCC...    57   4e-13
CR382122_543(CR382122|pid:none) Kluyveromyces lactis strain NRRL...    47   7e-13
EU974306_1(EU974306|pid:none) Zea mays clone 445645 unknown mRNA.      57   1e-12
CU928167_354(CU928167|pid:none) Kluyveromyces thermotolerans str...    75   8e-12
(Q7RZ85) RecName: Full=Phosphatidylglycerol/phosphatidylinositol...    72   5e-11
AK227594_1(AK227594|pid:none) Arabidopsis thaliana mRNA for hypo...    70   3e-10
(Q4X136) RecName: Full=Phosphatidylglycerol/phosphatidylinositol...    69   6e-10
(Q6CNE0) RecName: Full=Phosphatidylglycerol/phosphatidylinositol...    69   6e-10
CP000502_275(CP000502|pid:none) Pichia stipitis CBS 6054 chromos...    67   2e-09
(Q12408) RecName: Full=Phosphatidylglycerol/phosphatidylinositol...    66   4e-09
AM920430_43(AM920430|pid:none) Penicillium chrysogenum Wisconsin...    65   6e-09
AC148819_18(AC148819|pid:none) Medicago truncatula chromosome 2 ...    61   1e-08
CU633457_233(CU633457|pid:none) Podospora anserina genomic DNA c...    64   1e-08
(Q6BV42) RecName: Full=Phosphatidylglycerol/phosphatidylinositol...    64   1e-08
AP007155_748(AP007155|pid:none) Aspergillus oryzae RIB40 genomic...    64   1e-08
(Q5KIR9) RecName: Full=Phosphatidylglycerol/phosphatidylinositol...    64   1e-08
AM425399_1(AM425399|pid:none) Vitis vinifera contig VV78X202323....    64   1e-08
FN392319_1534(FN392319|pid:none) Pichia pastoris GS115 chromosom...    63   4e-08
AP009484_338(AP009484|pid:none) Macrococcus caseolyticus JCSC540...    51   5e-08
AM429733_1(AM429733|pid:none) Vitis vinifera contig VV78X195295....    62   9e-08
AE017350_203(AE017350|pid:none) Cryptococcus neoformans var. neo...    48   1e-07
AC004411_29(AC004411|pid:none) Arabidopsis thaliana chromosome 2...    60   3e-07
AY842023_1(AY842023|pid:none) Arabidopsis thaliana putative purp...    60   3e-07
D84908(D84908;T02199;T02689)probable phosphoesterase (EC 3.1.-.-...    60   3e-07
EF083906_1(EF083906|pid:none) Picea sitchensis clone WS0271_M08 ...    59   6e-07
CU928174_222(CU928174|pid:none) Zygosaccharomyces rouxii strain ...    59   6e-07
AC084296_18(AC084296|pid:none) Oryza sativa chromosome 3 BAC OSJ...    58   1e-06
AP005092_6(AP005092|pid:none) Oryza sativa Japonica Group genomi...    57   2e-06
(Q6FNB1) RecName: Full=Phosphatidylglycerol/phosphatidylinositol...    57   2e-06
(Q756Q3) RecName: Full=Phosphatidylglycerol/phosphatidylinositol...    56   4e-06
AK060475_1(AK060475|pid:none) Oryza sativa Japonica Group cDNA c...    56   5e-06
AM920437_1849(AM920437|pid:none) Penicillium chrysogenum Wiscons...    55   1e-05
EF145820_1(EF145820|pid:none) Populus trichocarpa clone WS0113_J...    55   1e-05
EU975900_1(EU975900|pid:none) Zea mays clone 504766 ML domain pr...    54   2e-05
BT041039_1(BT041039|pid:none) Zea mays full-length cDNA clone ZM...    54   2e-05
EU973929_1(EU973929|pid:none) Zea mays clone 424469 ML domain pr...    54   2e-05
AJ853479_1(AJ853479|pid:none) Nicotiana glauca partial mRNA for ...    53   3e-05
FJ596177_1(FJ596177|pid:none) Capsicum annuum putative ML domain...    53   4e-05
EF145038_1(EF145038|pid:none) Populus trichocarpa clone WS0111_L...    52   5e-05
AY086418_1(AY086418|pid:none) Arabidopsis thaliana clone 250294 ...    51   1e-04
AC016795_7(AC016795|pid:none) Arabidopsis thaliana chromosome II...    51   1e-04
AM459904_2(AM459904|pid:none) Vitis vinifera contig VV78X006315....    51   2e-04
CP000140_3467(CP000140|pid:none) Parabacteroides distasonis ATCC...    50   3e-04
(O59759) RecName: Full=Uncharacterized protein C1020.05; Flags: ...    48   0.001
AY261791_1(AY261791|pid:none) Arabidopsis thaliana clone At2g468...    48   0.001
BT061769_1(BT061769|pid:none) Zea mays full-length cDNA clone ZM...    47   0.002
EF086128_1(EF086128|pid:none) Picea sitchensis clone WS0286_E11 ...    47   0.002
AM942444_1736(AM942444|pid:none) Corynebacterium urealyticum DSM...    45   0.009
CR382129_85(CR382129|pid:none) Yarrowia lipolytica strain CLIB12...    45   0.011
BX950851_4218(BX950851|pid:none) Erwinia carotovora subsp. atros...    44   0.015
(Q9HLR7) RecName: Full=DNA double-strand break repair protein mr...    43   0.042
EU963219_1(EU963219|pid:none) Zea mays clone 259399 purple acid ...    41   0.16
BT039107_1(BT039107|pid:none) Zea mays full-length cDNA clone ZM...    41   0.16
AM295250_2242(AM295250|pid:none) Staphylococcus carnosus subsp. ...    41   0.16
BT063848_1(BT063848|pid:none) Zea mays full-length cDNA clone ZM...    41   0.16
(Q8NKQ0) RecName: Full=DNA double-strand break repair protein mr...    40   0.27
CP000814_1587(CP000814|pid:none) Campylobacter jejuni subsp. jej...    40   0.27
AK061321_1(AK061321|pid:none) Oryza sativa Japonica Group cDNA c...    40   0.36
(Q6CPQ2) RecName: Full=Protein SIA1; Flags: Precursor;  &CR38212...    38   0.39
AK069660_1(AK069660|pid:none) Oryza sativa Japonica Group cDNA c...    39   0.47
CP001404_63(CP001404|pid:none) Sulfolobus islandicus Y.N.15.51, ...    39   0.61
EU962699_1(EU962699|pid:none) Zea mays clone 244840 tartrate-res...    38   1.0
CP000082_2036(CP000082|pid:none) Psychrobacter arcticus 273-4, c...    38   1.4
BT069855_1(BT069855|pid:none) Zea mays full-length cDNA clone ZM...    38   1.4
CP000853_2252(CP000853|pid:none) Alkaliphilus oremlandii OhILAs,...    38   1.4
CP000521_242(CP000521|pid:none) Acinetobacter baumannii ATCC 179...    38   1.4
AK176496_1(AK176496|pid:none) Arabidopsis thaliana mRNA, partial...    37   1.8
EF083943_1(EF083943|pid:none) Picea sitchensis clone WS02713_C21...    37   2.3
CP000817_372(CP000817|pid:none) Lysinibacillus sphaericus C3-41,...    37   2.3
EU962550_1(EU962550|pid:none) Zea mays clone 243637 tartrate-res...    37   2.3
CP000246_2364(CP000246|pid:none) Clostridium perfringens ATCC 13...    37   3.0
AE013599_458(AE013599|pid:none) Drosophila melanogaster chromoso...    36   4.0
AE013599_460(AE013599|pid:none) Drosophila melanogaster chromoso...    36   4.0
AE013599_456(AE013599|pid:none) Drosophila melanogaster chromoso...    36   4.0
AE013599_457(AE013599|pid:none) Drosophila melanogaster chromoso...    36   4.0
AY836668_1(AY836668|pid:none) Aurelia aurita clone 236 gangliosi...    36   5.2
AE007869_384(AE007869|pid:none) Agrobacterium tumefaciens str. C...    36   5.2
CP001145_168(CP001145|pid:none) Coprothermobacter proteolyticus ...    36   5.2
A97407(A97407) hypothetical protein AGR_C_691 [imported] - Agrob...    36   5.2
CP000383_820(CP000383|pid:none) Cytophaga hutchinsonii ATCC 3340...    35   6.7
CP000909_2195(CP000909|pid:none) Chloroflexus aurantiacus J-10-f...    35   6.7
(Q97C75) RecName: Full=DNA double-strand break repair protein mr...    35   6.7
BT055729_1(BT055729|pid:none) Zea mays full-length cDNA clone ZM...    35   6.7
CP000724_4386(CP000724|pid:none) Alkaliphilus metalliredigens QY...    35   6.7
BA000016_2160(BA000016|pid:none) Clostridium perfringens str. 13...    35   6.7
AK128416_1(AK128416|pid:none) Homo sapiens cDNA FLJ46559 fis, cl...    27   8.6
CP000606_546(CP000606|pid:none) Shewanella loihica PV-4, complet...    35   8.8
BT038212_1(BT038212|pid:none) Zea mays full-length cDNA clone ZM...    35   8.8
AM286415_3509(AM286415|pid:none) Yersinia enterocolitica subsp. ...    35   8.8
AX647825_1(AX647825|pid:none) Sequence 2017 from Patent EP1270724.     31   8.9

>(Q54SZ8) RecName: Full=Putative
           phosphatidylglycerol/phosphatidylinositol transfer
           protein 2;          Short=PG/PI-TP; Flags: Precursor;
          Length = 142

 Score =  135 bits (340), Expect = 5e-30
 Identities = 70/136 (51%), Positives = 89/136 (65%), Gaps = 1/136 (0%)
 Frame = +1

Query: 55  SFSFFALVSPSFTQVWSNCGTAADKFQITNVVLDPPTPVKGQDITISASGILDETVTGGN 234
           S     L S SF  +WSNCG   +KF+IT+V + P  PVKG+ ITIS SG+L E +T G
Sbjct: 8   SILLILLTSTSFGDIWSNCGPN-EKFKITSVSIVPDPPVKGKLITISGSGVLGENLTSGQ 66

Query: 235 VAVKVKYGFITLINENVSICS-SQDPLACPIAAGDYQKNMTEMIPSDAPSGKYTGNVVIT 411
           VA+ VK+G ITLINE   IC+    P  CPI  G+Y   +   IP  AP+GKYTG+V +T
Sbjct: 67  VAILVKFGLITLINEKKDICTLPGSPYKCPIKEGEYSHTINFTIPEAAPNGKYTGHVSVT 126

Query: 412 DQNNAEIACIDVDINL 459
           DQ ++EIACIDV + L
Sbjct: 127 DQESSEIACIDVTLTL 142

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,765,408,986
Number of extensions: 58462239
Number of successful extensions: 157149
Number of sequences better than 10.0: 119
Number of HSP's gapped: 156606
Number of HSP's successfully gapped: 196
Length of query: 587
Length of database: 1,051,180,864
Length adjustment: 134
Effective length of query: 453
Effective length of database: 617,481,958
Effective search space: 279719326974
Effective search space used: 279719326974
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.95  gvh: 0.72  alm: 0.47  top: 0.40  tms: 0.00  mit: 0.29  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: extracellular, including cell wall
	 12.0 %: cytoplasmic
	 12.0 %: nuclear
	  8.0 %: mitochondrial
	  8.0 %: vacuolar
	  8.0 %: endoplasmic reticulum

>> prediction for Contig-U13926-1 is exc
VS (DIR, S) 16
VH (FL, L) 1
VF (FL, S) 2
AH (FL, L) 0
AF (FL, S) 1
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 2
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0