| Contig-U13889-1 |
| Contig ID |
Contig-U13889-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
612 |
| Chromosome number (1..6, M) |
4 |
| Chromosome length |
5430582 |
| Start point |
1426797 |
| End point |
1426185 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
2 |
| Number of EST |
3 |
| Link to clone list |
U13889 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.12.14 |
| Homology vs DNA |
Query= Contig-U13889-1 (Contig-U13889-1Q) /CSM_Contig/Contig-U13889-1Q.Seq.d
(612 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ330911) Dictyostelium discoideum cDNA clone:dda33n06, 5' ... 763 0.0 1
(BJ348425) Dictyostelium discoideum cDNA clone:dda33n06, 3' ... 739 0.0 1
(BJ324417) Dictyostelium discoideum cDNA clone:dda6o03, 5' e... 628 e-176 1
(CZ545610) SRAA-aad62h04.g1 Strongyloides ratti whole genome... 40 3e-10 4
(BX538352) Cryptosporidium parvum chromosome 6, complete seq... 46 3e-08 2
(AQ522076) CpG0968B CpIOWAgDNA1 Cryptosporidium parvum genom... 46 3e-08 2
(BI501214) kx29d02.y1 Parastrongyloides trichosuri PA pAMP1 ... 42 3e-06 3
(AC142420) Rattus norvegicus clone CH230-262M24, WORKING DRA... 54 0.006 1
(AC128825) Rattus norvegicus clone CH230-492C20, WORKING DRA... 54 0.006 1
(AC128419) Rattus norvegicus clone CH230-157G13, *** SEQUENC... 54 0.006 1
(DV743455) ID0AFF9DH11CM1 ID0AFF Acyrthosiphon pisum cDNA cl... 40 0.020 2
(AC222671) Bos taurus clone CH240-442M21, WORKING DRAFT SEQU... 50 0.094 1
(EI327456) GM_WBc0065G16.r GM_WBc Glycine max genomic clone ... 50 0.094 1
(DE094679) Oryzias latipes DNA, clone: ola1-218C22.F, genomi... 50 0.094 1
(DE064366) Oryzias latipes DNA, clone: ola1-110O21.F, genomi... 50 0.094 1
(DN297527) PL04009B1H04 cDNA from sexually mature hermaphodi... 36 0.28 2
(AW828880) ra69c06.y1 Bird-Rao Meloidogyne incognita J2 Melo... 36 0.28 2
(CB931034) ri67e08.y1 Meloidogyne chitwoodi J2 pDNR LIB Melo... 38 0.28 2
(EK338676) 1095467052333 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.37 1
(EV417076) 210763446 NGP Nasonia giraulti cDNA clone 125I11 ... 48 0.37 1
(AC155661) Bos taurus clone CH240-37K23, WORKING DRAFT SEQUE... 44 0.38 3
(AC005504) Plasmodium falciparum chromosome 12, *** SEQUENCI... 32 0.84 5
(ET181755) PT_7Ga_B01_00001_O12_f Pinus taeda '7-56' genomic... 42 0.87 2
(CR762381) Zebrafish DNA sequence from clone DKEY-284H11 in ... 40 0.87 3
(CT532637) A BAC library has been constructed from cultivar ... 36 0.92 2
(BQ475644) cicindela6c12.g Cicindela campestris cDNA Cicinde... 36 1.0 2
(AU264135) Dictyostelium discoideum vegetative cDNA clone:VS... 34 1.0 2
(BJ431114) Dictyostelium discoideum cDNA clone:ddv9m22, 3' e... 34 1.0 2
(AU268909) Dictyostelium discoideum vegetative cDNA clone:VS... 34 1.0 2
(AU266434) Dictyostelium discoideum vegetative cDNA clone:VS... 34 1.0 2
(AU264565) Dictyostelium discoideum vegetative cDNA clone:VS... 34 1.0 2
(AU268849) Dictyostelium discoideum vegetative cDNA clone:VS... 34 1.0 2
(AU270206) Dictyostelium discoideum vegetative cDNA clone:VS... 34 1.0 2
(AU269891) Dictyostelium discoideum vegetative cDNA clone:VS... 34 1.0 2
(AU270186) Dictyostelium discoideum vegetative cDNA clone:VS... 34 1.0 2
(AU264084) Dictyostelium discoideum vegetative cDNA clone:VS... 34 1.0 2
(AC040161) Homo sapiens chromosome 16 clone CTC-420A11, comp... 46 1.5 1
(AP009967) Lotus japonicus genomic DNA, chromosome 2, clone:... 46 1.5 1
(AC222059) Bos taurus clone CH240-373A13, WORKING DRAFT SEQU... 46 1.5 1
(FH551503) CHO_OF4363xi08f1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 1.5 1
(AQ172127) HS_3170_B1_A04_T7 CIT Approved Human Genomic Sper... 46 1.5 1
(AM603014) Entamoeba invadens IP1 GSS, clone inv021c10.p1k. 46 1.5 1
(ED679199) GM_WBb0011I02.f GM_WBb Glycine max genomic clone ... 46 1.5 1
(CL301627) gbs2_CH257_PP008QQ2_SP6_D11CD695 CHORI-257 Lemur ... 46 1.5 1
(BH646738) BOHVI79TR BO_2_3_KB Brassica oleracea genomic clo... 46 1.5 1
(EH620137) CHO_SL026xf15f1.ab1 CHO_SL Nicotiana tabacum cDNA... 46 1.5 1
(EE264889) B01_B01sg2a2_pDNRf_521292 Myzus persicae, tobacco... 46 1.5 1
(AC232192) Procavia capensis clone CH280-458B16, WORKING DRA... 40 1.8 6
(EV373409) EST_eluc_bkhp_722143 elucbkhp mixed_tissue Esox l... 42 1.9 2
(AC027342) Homo sapiens chromosome 5 clone CTD-2294O13, comp... 38 2.1 4
(AE002147) Ureaplasma parvum serovar 3 str. ATCC 700970 sect... 40 2.2 4
(FC663360) CAXW3209.fwd CAXW Lottia gigantea from female gon... 36 2.8 2
(BX323804) Zebrafish DNA sequence from clone DKEY-270K22 in ... 40 2.8 3
(CU468369) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 2.9 2
(AY303170) Solanum bulbocastanum chromosome 8 clone UW3A14, ... 34 2.9 4
(AC073225) Homo sapiens BAC clone RP11-611G1 from 2, complet... 32 2.9 2
(EK342009) 1095467065818 Global-Ocean-Sampling_GS-31-01-01-1... 38 3.0 2
(D50338) Dictyostelium discoideum DNA for ribosomal protein,... 32 3.5 2
(AP007870) Lotus japonicus genomic DNA, chromosome 5, clone:... 40 3.6 5
(BH983758) odf14d11.g1 B.oleracea002 Brassica oleracea genom... 32 3.8 2
(AU263167) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU264134) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU262937) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU262121) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(BJ412802) Dictyostelium discoideum cDNA clone:ddv9m22, 5' e... 32 3.9 2
(BJ421687) Dictyostelium discoideum cDNA clone:ddv43c14, 5' ... 32 3.9 2
(AU268848) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(BJ428387) Dictyostelium discoideum cDNA clone:ddv11b20, 3' ... 32 3.9 2
(AU261547) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU269884) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU265528) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(BJ420740) Dictyostelium discoideum cDNA clone:ddv40d09, 5' ... 32 3.9 2
(AU268908) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU262683) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU263011) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU262696) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU261704) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(BJ445414) Dictyostelium discoideum cDNA clone:ddv59k11, 3' ... 32 3.9 2
(BJ417180) Dictyostelium discoideum cDNA clone:ddv29b22, 5' ... 32 3.9 2
(AU262419) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU270205) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU267963) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU266682) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU261469) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU263702) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU261490) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU269885) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU265418) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU269890) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU266841) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU263523) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU263339) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU270185) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU264083) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU266728) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU263425) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU266201) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU270420) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(AU266132) Dictyostelium discoideum vegetative cDNA clone:VS... 32 3.9 2
(BJ417370) Dictyostelium discoideum cDNA clone:ddv30j12, 5' ... 32 3.9 2
>(BJ330911) Dictyostelium discoideum cDNA clone:dda33n06, 5' end,
single read.
Length = 602
Score = 763 bits (385), Expect = 0.0
Identities = 385/385 (100%)
Strand = Plus / Plus
Query: 115 caccatcatcataaattatgcataggataagagaagttcaaaatataaataaaaaggaat 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 caccatcatcataaattatgcataggataagagaagttcaaaatataaataaaaaggaat 164
Query: 175 taaatttaaatattagtgagagtgcatcatggcatgctgattatagtcatagtccatata 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 taaatttaaatattagtgagagtgcatcatggcatgctgattatagtcatagtccatata 224
Query: 235 tatatgttggtggattaaattatgatttgaatgaaggtgatgttattgcaatattcagtc 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tatatgttggtggattaaattatgatttgaatgaaggtgatgttattgcaatattcagtc 284
Query: 295 aatatggtgaaatatctgaatgtaatttagtcagaaataaagagacaggtcgatcacaag 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 aatatggtgaaatatctgaatgtaatttagtcagaaataaagagacaggtcgatcacaag 344
Query: 355 gattttgttttgttggttatgatcaacaaaaaagtaccgtattggctgtagataatttaa 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gattttgttttgttggttatgatcaacaaaaaagtaccgtattggctgtagataatttaa 404
Query: 415 atggtataaacctattaggtaaaactattaaagttgatcatgttaaagattataaaagac 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 atggtataaacctattaggtaaaactattaaagttgatcatgttaaagattataaaagac 464
Query: 475 caaaaaagaataatgaagatttaac 499
|||||||||||||||||||||||||
Sbjct: 465 caaaaaagaataatgaagatttaac 489
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 598,904,402
Number of extensions: 41907289
Number of successful extensions: 3779865
Number of sequences better than 10.0: 169
Length of query: 612
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 589
Effective length of database: 93,106,754,628
Effective search space: 54839878475892
Effective search space used: 54839878475892
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7. 8 |
| Homology vs Protein |
Query= Contig-U13889-1 (Contig-U13889-1Q) /CSM_Contig/Contig-U13889-1Q.Seq.d
(612 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK160232_1(AK160232|pid:none) Mus musculus 11 days embryo whole ... 150 3e-35
AM471738_1(AM471738|pid:none) Vitis vinifera contig VV78X179691.... 148 1e-34
AF151837_1(AF151837|pid:none) Homo sapiens CGI-79 protein mRNA, ... 145 9e-34
BC003676_1(BC003676|pid:none) Homo sapiens RNA binding motif pro... 145 9e-34
BC105582_1(BC105582|pid:none) Homo sapiens RNA binding motif pro... 145 9e-34
CR761911_1(CR761911|pid:none) Xenopus tropicalis finished cDNA, ... 144 1e-33
AX969680_1(AX969680|pid:none) Sequence 483 from Patent EP1104808. 144 2e-33
BC096985_1(BC096985|pid:none) Danio rerio RNA binding motif prot... 144 2e-33
AM270131_43(AM270131|pid:none) Aspergillus niger contig An07c013... 142 6e-33
AE017349_319(AE017349|pid:none) Cryptococcus neoformans var. neo... 141 1e-32
(Q10B98) RecName: Full=Zinc finger CCCH domain-containing protei... 140 2e-32
AM920437_1645(AM920437|pid:none) Penicillium chrysogenum Wiscons... 139 8e-32
(O94290) RecName: Full=U2 snRNP component ist3; AltName: Full=RN... 135 9e-31
CP001328_369(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 134 3e-30
T15706(T15706) hypothetical protein C30B5.4 - Caenorhabditis ele... 131 2e-29
CU633897_96(CU633897|pid:none) Podospora anserina genomic DNA ch... 129 7e-29
DQ648522_1(DQ648522|pid:none) Bombyx mori RNA binding motif prot... 127 2e-28
CU928170_557(CU928170|pid:none) Kluyveromyces thermotolerans str... 125 7e-28
AE016817_417(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 123 5e-27
BX538352_31(BX538352|pid:none) Cryptosporidium parvum chromosome... 119 5e-26
(P40565) RecName: Full=U2 snRNP component IST3; AltName: Full=U2... 113 4e-24
CU928179_157(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 111 1e-23
FN392319_362(FN392319|pid:none) Pichia pastoris GS115 chromosome... 110 3e-23
CR382124_564(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 109 7e-23
CP000733_1149(CP000733|pid:none) Coxiella burnetii Dugway 5J108-... 74 2e-12
CP000890_1144(CP000890|pid:none) Coxiella burnetii RSA 331, comp... 74 2e-12
AE016828_1012(AE016828|pid:none) Coxiella burnetii RSA 493, comp... 74 2e-12
BT050206_1(BT050206|pid:none) Salmo salar clone ssal-evf-501-088... 72 9e-12
AF533016_1(AF533016|pid:none) Salmo salar hyperosmotic glycine r... 72 2e-11
BT057118_1(BT057118|pid:none) Salmo salar clone ssal-rgb2-592-00... 72 2e-11
BT044019_1(BT044019|pid:none) Salmo salar clone HM5_1035 hyperos... 72 2e-11
BT048518_1(BT048518|pid:none) Salmo salar clone ssal-evf-501-381... 72 2e-11
BT043684_1(BT043684|pid:none) Salmo salar clone HM5_1838 hyperos... 70 6e-11
BT057440_1(BT057440|pid:none) Salmo salar clone ssal-evf-569-239... 70 6e-11
FJ438505_1(FJ438505|pid:none) Epinephelus coioides hyperosmotic ... 69 8e-11
CP000975_286(CP000975|pid:none) Methylacidiphilum infernorum V4,... 69 8e-11
BT083094_1(BT083094|pid:none) Anoplopoma fimbria clone afim-evh-... 69 1e-10
CP000840_74(CP000840|pid:none) Acaryochloris marina MBIC11017 pl... 68 2e-10
CP000828_2532(CP000828|pid:none) Acaryochloris marina MBIC11017,... 67 3e-10
AY048973_1(AY048973|pid:none) Solanum tuberosum RNA-binding prot... 67 3e-10
CP000361_59(CP000361|pid:none) Arcobacter butzleri RM4018, compl... 67 4e-10
CP000806_1940(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 67 5e-10
CP000095_1881(CP000095|pid:none) Prochlorococcus marinus str. NA... 66 7e-10
CP000838_96(CP000838|pid:none) Acaryochloris marina MBIC11017 pl... 66 9e-10
CP001100_1585(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 66 9e-10
CP000828_527(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 65 1e-09
CP000806_146(CP000806|pid:none) Cyanothece sp. ATCC 51142 circul... 65 1e-09
AE017126_1195(AE017126|pid:none) Prochlorococcus marinus subsp. ... 65 1e-09
AB207971_1(AB207971|pid:none) Lolium perenne gene for glycine-ri... 65 1e-09
CP001108_1196(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 65 1e-09
AE015928_3838(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 65 1e-09
AE015928_1887(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 65 2e-09
BX548175_1418(BX548175|pid:none) Prochlorococcus marinus MIT9313... 65 2e-09
BX294151_174(BX294151|pid:none) Rhodopirellula baltica SH 1 comp... 65 2e-09
FN314363_1(FN314363|pid:none) Schistosoma japonicum isolate Anhu... 65 2e-09
BX569692_310(BX569692|pid:none) Synechococcus sp. WH8102 complet... 65 2e-09
FN357488_2(FN357488|pid:none) Schistosoma mansoni genome sequenc... 65 2e-09
FN314364_1(FN314364|pid:none) Schistosoma japonicum isolate Anhu... 65 2e-09
CP001097_2035(CP001097|pid:none) Chlorobium limicola DSM 245, co... 65 2e-09
BT074603_1(BT074603|pid:none) Osmerus mordax clone omor-rgc-514-... 65 2e-09
CP000554_962(CP000554|pid:none) Prochlorococcus marinus str. MIT... 65 2e-09
CP001101_100(CP001101|pid:none) Chlorobium phaeobacteroides BS1,... 64 3e-09
CP001344_909(CP001344|pid:none) Cyanothece sp. PCC 7425, complet... 64 3e-09
BA000022_1019(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,... 64 3e-09
BX842646_292(BX842646|pid:none) Bdellovibrio bacteriovorus compl... 64 3e-09
AP009178_278(AP009178|pid:none) Nitratiruptor sp. SB155-2 genomi... 64 3e-09
(Q05966) RecName: Full=Glycine-rich RNA-binding protein 10; &FB... 64 3e-09
AF009003_1(AF009003|pid:none) Pelargonium x hortorum glycine-ric... 64 4e-09
EF086676_1(EF086676|pid:none) Picea sitchensis clone WS02733_K19... 64 4e-09
BC161141_1(BC161141|pid:none) Xenopus tropicalis RNA binding mot... 64 4e-09
(Q29RT0) RecName: Full=Heterogeneous nuclear ribonucleoprotein G... 64 4e-09
FJ830866_1(FJ830866|pid:none) Capitella sp. I Grassle & Grassle,... 64 4e-09
AB044535_1(AB044535|pid:none) Xenopus laevis xCIRP2 mRNA for col... 64 4e-09
CP000492_1229(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 64 4e-09
CP000828_5426(CP000828|pid:none) Acaryochloris marina MBIC11017,... 63 6e-09
EF147596_1(EF147596|pid:none) Populus trichocarpa clone WS0123_K... 63 6e-09
U71299_1(U71299|pid:none) Ambystoma mexicanum RNA-binding protei... 63 6e-09
BX842649_260(BX842649|pid:none) Bdellovibrio bacteriovorus compl... 63 6e-09
AE014134_536(AE014134|pid:none) Drosophila melanogaster chromoso... 63 7e-09
AC2391(AC2391) RNA-binding protein [imported] - Nostoc sp. (stra... 63 7e-09
AE014134_533(AE014134|pid:none) Drosophila melanogaster chromoso... 63 7e-09
CP000393_4135(CP000393|pid:none) Trichodesmium erythraeum IMS101... 63 7e-09
CP000815_769(CP000815|pid:none) Paulinella chromatophora chromat... 63 7e-09
BT045252_1(BT045252|pid:none) Salmo salar clone ssal-rgf-516-227... 63 7e-09
S55886_1(S55886|pid:none) Drosophila melanogaster RRM9 (rbp9) ge... 63 7e-09
DQ126684_1(DQ126684|pid:none) Gallus gallus aggrecan promoter bi... 62 1e-08
AM778891_13(AM778891|pid:none) Microcystis aeruginosa PCC 7806 g... 62 1e-08
CP000383_2371(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 62 1e-08
CP001110_1298(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 62 1e-08
AB085214_1(AB085214|pid:none) Hyla japonica cirp-beta mRNA for c... 62 1e-08
CP000393_1589(CP000393|pid:none) Trichodesmium erythraeum IMS101... 62 1e-08
DQ215543_1(DQ215543|pid:none) Taeniopygia guttata clone 0058P006... 62 1e-08
(Q14011) RecName: Full=Cold-inducible RNA-binding protein; AltNa... 62 1e-08
AJ719636_1(AJ719636|pid:none) Gallus gallus mRNA for hypothetica... 62 1e-08
AB171494_1(AB171494|pid:none) Macaca fascicularis brain cDNA clo... 62 1e-08
BC102773_1(BC102773|pid:none) Bos taurus cold inducible RNA bind... 62 1e-08
AB306286_1(AB306286|pid:none) Alligator mississippiensis CIRBP m... 62 1e-08
CP000393_4134(CP000393|pid:none) Trichodesmium erythraeum IMS101... 62 1e-08
DQ215534_1(DQ215534|pid:none) Taeniopygia guttata clone 0063P001... 62 1e-08
DQ215533_1(DQ215533|pid:none) Taeniopygia guttata clone 0058P002... 62 1e-08
AB170797_1(AB170797|pid:none) Macaca fascicularis brain cDNA clo... 62 1e-08
CP001108_121(CP001108|pid:none) Prosthecochloris aestuarii DSM 2... 62 1e-08
AK304470_1(AK304470|pid:none) Homo sapiens cDNA FLJ52850 complet... 62 1e-08
DQ215539_1(DQ215539|pid:none) Taeniopygia guttata clone 0063P002... 62 1e-08
AI2066(AI2066) RNA-binding protein RbpA2 [imported] - Nostoc sp.... 62 1e-08
CP000878_1195(CP000878|pid:none) Prochlorococcus marinus str. MI... 62 1e-08
AB168869_1(AB168869|pid:none) Macaca fascicularis testis cDNA, c... 62 1e-08
EF144619_1(EF144619|pid:none) Populus trichocarpa clone WS01116_... 62 1e-08
AP009552_3215(AP009552|pid:none) Microcystis aeruginosa NIES-843... 62 1e-08
FB872108_1(FB872108|pid:none) Sequence 91381 from Patent WO20080... 62 1e-08
CP000492_2580(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 62 1e-08
AJ237847_1(AJ237847|pid:none) Mus musculus mRNA for heterogeneou... 62 1e-08
S41766(S41766;S43202)heterogeneous nuclear ribonucleoprotein G -... 62 1e-08
AJ237846_1(AJ237846|pid:none) Mus musculus mRNA for heterogeneou... 62 1e-08
(A5A6M3) RecName: Full=Heterogeneous nuclear ribonucleoprotein G... 62 1e-08
Z23064_1(Z23064|pid:none) H.sapiens mRNA gene for hnRNP G protein. 62 1e-08
L20890_1(L20890|pid:none) Anabaena sp. RNA-binding protein gene,... 62 1e-08
CP000777_1786(CP000777|pid:none) Leptospira biflexa serovar Pato... 62 1e-08
EF144922_1(EF144922|pid:none) Populus trichocarpa clone WS01119_... 62 1e-08
BC077813_1(BC077813|pid:none) Xenopus laevis RNA-binding region ... 62 2e-08
AK303910_1(AK303910|pid:none) Homo sapiens cDNA FLJ58465 complet... 62 2e-08
CR749443_1(CR749443|pid:none) Homo sapiens mRNA; cDNA DKFZp781C0... 62 2e-08
(Q8VH51) RecName: Full=RNA-binding protein 39; AltName: Full=RNA... 62 2e-08
AK297520_1(AK297520|pid:none) Homo sapiens cDNA FLJ59035 complet... 62 2e-08
BC004000_1(BC004000|pid:none) Mus musculus RNA binding motif pro... 62 2e-08
S71779(S71779) glycine-rich RNA-binding protein GRP1 - wheat &U... 62 2e-08
AK299165_1(AK299165|pid:none) Homo sapiens cDNA FLJ58459 complet... 62 2e-08
(P60824) RecName: Full=Cold-inducible RNA-binding protein; AltNa... 62 2e-08
BC093451_1(BC093451|pid:none) Xenopus tropicalis RNA binding mot... 62 2e-08
BC075146_1(BC075146|pid:none) Xenopus laevis MGC81970 protein, m... 62 2e-08
AJ245939_1(AJ245939|pid:none) Ricinus communis mRNA for glycine-... 62 2e-08
BX537770_1(BX537770|pid:none) Homo sapiens mRNA; cDNA DKFZp781I1... 62 2e-08
AK154989_1(AK154989|pid:none) Mus musculus NOD-derived CD11c +ve... 62 2e-08
X92980_1(X92980|pid:none) A.variabilis rbp gene. 62 2e-08
AF200321_1(AF200321|pid:none) Catharanthus roseus clone C4.7 put... 62 2e-08
CT978603_1079(CT978603|pid:none) Synechococcus sp. RCC307 genomi... 62 2e-08
AK126158_1(AK126158|pid:none) Homo sapiens cDNA FLJ44170 fis, cl... 62 2e-08
AK299678_1(AK299678|pid:none) Homo sapiens cDNA FLJ59214 complet... 62 2e-08
CP001287_332(CP001287|pid:none) Cyanothece sp. PCC 8801, complet... 62 2e-08
(Q44556) RecName: Full=Putative RNA-binding protein rbpD; &AG23... 61 2e-08
CP000435_14(CP000435|pid:none) Synechococcus sp. CC9311, complet... 61 2e-08
BC044487_1(BC044487|pid:none) Danio rerio RNA binding motif prot... 61 2e-08
(Q08937) RecName: Full=29 kDa ribonucleoprotein B, chloroplastic... 61 2e-08
DQ120650_1(DQ120650|pid:none) Homo sapiens RBM1 gene, partial cds. 61 2e-08
(P49314) RecName: Full=31 kDa ribonucleoprotein, chloroplastic; ... 61 2e-08
AB462999_1(AB462999|pid:none) Synthetic construct DNA, clone: pF... 61 2e-08
U79565_1(U79565|pid:none) Macropus eugenii RBM1 mRNA, complete c... 61 2e-08
CP000890_872(CP000890|pid:none) Coxiella burnetii RSA 331, compl... 61 2e-08
(P49311) RecName: Full=Glycine-rich RNA-binding protein GRP2A; ... 61 2e-08
DQ120651_1(DQ120651|pid:none) Pan troglodytes RBM1 gene, partial... 61 2e-08
AB441821_1(AB441821|pid:none) Tokudaia osimensis RBMX gene for R... 61 2e-08
DQ120655_1(DQ120655|pid:none) Cercopithecus sabaeus RBM1 gene, p... 61 2e-08
AE017126_13(AE017126|pid:none) Prochlorococcus marinus subsp. ma... 61 3e-08
T22767(T22767) hypothetical protein F56A8.6 - Caenorhabditis ele... 61 3e-08
AF034741_1(AF034741|pid:none) Macropus eugenii heterogeneous nuc... 61 3e-08
CP000828_1947(CP000828|pid:none) Acaryochloris marina MBIC11017,... 61 3e-08
AL117204_35(AL117204|pid:none) Caenorhabditis elegans YAC Y116A8... 61 3e-08
CR954201_559(CR954201|pid:none) Ostreococcus tauri strain OTTH05... 61 3e-08
BC091794_1(BC091794|pid:none) Danio rerio RNA binding motif prot... 61 3e-08
(Q9WX39) RecName: Full=Putative RNA-binding protein rbpF; &AB00... 61 3e-08
CP000110_14(CP000110|pid:none) Synechococcus sp. CC9605, complet... 61 3e-08
EF085266_1(EF085266|pid:none) Picea sitchensis clone WS02718_G07... 61 3e-08
AM778891_14(AM778891|pid:none) Microcystis aeruginosa PCC 7806 g... 61 3e-08
(Q44554) RecName: Full=Putative RNA-binding protein rbpB; &AI21... 61 3e-08
AM778953_108(AM778953|pid:none) Microcystis aeruginosa PCC 7806 ... 60 4e-08
CP000777_2941(CP000777|pid:none) Leptospira biflexa serovar Pato... 60 4e-08
(O35479) RecName: Full=Heterogeneous nuclear ribonucleoprotein G... 60 4e-08
(P84586) RecName: Full=Heterogeneous nuclear ribonucleoprotein G... 60 4e-08
CP000112_793(CP000112|pid:none) Desulfovibrio desulfuricans G20,... 60 4e-08
CP000096_86(CP000096|pid:none) Pelodictyon luteolum DSM 273, com... 60 4e-08
BC073641_1(BC073641|pid:none) Xenopus laevis MGC82977 protein, m... 60 4e-08
(Q15415) RecName: Full=RNA-binding motif protein, Y chromosome, ... 60 4e-08
AF255058_1(AF255058|pid:none) Pisum sativum 33 kDa ribonucleopro... 60 4e-08
AY394938_1(AY394938|pid:none) Danio rerio clone RK045A2G06 RNA b... 60 4e-08
CP001110_1948(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 60 4e-08
A44275_1(A44275|pid:none) Sequence 3 from Patent WO9511300. &B4... 60 4e-08
CP001037_5335(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 60 4e-08
AE000520_352(AE000520|pid:none) Treponema pallidum subsp. pallid... 60 4e-08
CP000095_13(CP000095|pid:none) Prochlorococcus marinus str. NATL... 60 4e-08
BC144577_1(BC144577|pid:none) Homo sapiens RNA binding motif pro... 60 4e-08
EU964628_1(EU964628|pid:none) Zea mays clone 280456 glycine-rich... 60 4e-08
BC144422_1(BC144422|pid:none) Homo sapiens cDNA clone MGC:177960... 60 4e-08
EU960096_1(EU960096|pid:none) Zea mays clone 221668 ribonucleopr... 60 5e-08
AK064923_1(AK064923|pid:none) Oryza sativa Japonica Group cDNA c... 60 5e-08
EF148377_1(EF148377|pid:none) Populus trichocarpa x Populus delt... 60 5e-08
FB912267_1(FB912267|pid:none) Sequence 131540 from Patent WO2008... 60 5e-08
AB003690_1(AB003690|pid:none) Anabaena variabilis rbpA2 gene for... 60 5e-08
BX649404_2(BX649404|pid:none) Zebrafish DNA sequence from clone ... 60 5e-08
AC084766_7(AC084766|pid:none) Oryza sativa chromosome 3 BAC OSJN... 60 5e-08
BC070649_1(BC070649|pid:none) Xenopus laevis hypothetical protei... 60 5e-08
AX886322_1(AX886322|pid:none) Sequence 2185 from Patent EP1033401. 60 5e-08
BC157792_1(BC157792|pid:none) Xenopus tropicalis hypothetical pr... 60 5e-08
CP000139_431(CP000139|pid:none) Bacteroides vulgatus ATCC 8482, ... 60 5e-08
FJ356060_1(FJ356060|pid:none) Chorispora bungeana putative glyci... 60 5e-08
BX649404_1(BX649404|pid:none) Zebrafish DNA sequence from clone ... 60 5e-08
AF279289_1(AF279289|pid:none) Homo sapiens testes-specific heter... 60 5e-08
AP010904_169(AP010904|pid:none) Desulfovibrio magneticus RS-1 DN... 60 5e-08
AB170452_1(AB170452|pid:none) Macaca fascicularis brain cDNA clo... 60 5e-08
BC072716_1(BC072716|pid:none) Danio rerio zgc:91918, mRNA (cDNA ... 60 6e-08
CP000581_580(CP000581|pid:none) Ostreococcus lucimarinus CCE9901... 60 6e-08
(P0C7P1) RecName: Full=RNA-binding motif protein, Y chromosome, ... 60 6e-08
D31712_1(D31712|pid:none) Arabidopsis thaliana gene for RNA-bind... 60 6e-08
AJ717349_1(AJ717349|pid:none) Danio rerio mRNA for RNA binding m... 60 6e-08
AE014134_1278(AE014134|pid:none) Drosophila melanogaster chromos... 60 6e-08
U08467_3(U08467|pid:none) Arabidopsis thaliana chloroplast RNA-b... 60 6e-08
BC070298_1(BC070298|pid:none) Homo sapiens RNA binding motif pro... 60 6e-08
AE014134_1280(AE014134|pid:none) Drosophila melanogaster chromos... 60 6e-08
D26182_1(D26182|pid:none) Nicotiana sylvestris mRNA for RNA-bind... 60 6e-08
(A6NDE4) RecName: Full=RNA-binding motif protein, Y chromosome, ... 60 6e-08
AF200323_1(AF200323|pid:none) Catharanthus roseus clone C4.26 pu... 60 6e-08
FJ499499_1(FJ499499|pid:none) Metarhizium anisopliae cold respon... 60 6e-08
FB912255_1(FB912255|pid:none) Sequence 131528 from Patent WO2008... 60 6e-08
(A6NEQ0) RecName: Full=RNA-binding motif protein, Y chromosome, ... 60 6e-08
FB912253_1(FB912253|pid:none) Sequence 131526 from Patent WO2008... 60 6e-08
(Q04836) RecName: Full=31 kDa ribonucleoprotein, chloroplastic; ... 60 6e-08
CP000435_1021(CP000435|pid:none) Synechococcus sp. CC9311, compl... 60 6e-08
DQ241855_1(DQ241855|pid:none) Solanum tuberosum clone 002F03 put... 60 6e-08
L20891_1(L20891|pid:none) Chlorogloeopsis sp. RNA-binding protei... 60 6e-08
AB025351_1(AB025351|pid:none) Rana catesbeiana mRNA for BFCIRP, ... 60 6e-08
(Q03251) RecName: Full=Glycine-rich RNA-binding protein 8; AltNa... 59 8e-08
CP000473_989(CP000473|pid:none) Solibacter usitatus Ellin6076, c... 59 8e-08
BX569689_14(BX569689|pid:none) Synechococcus sp. WH8102 complete... 59 8e-08
CP001099_86(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, c... 59 8e-08
CT978603_14(CT978603|pid:none) Synechococcus sp. RCC307 genomic ... 59 8e-08
AJ002894_1(AJ002894|pid:none) Oryza sativa mRNA for glycine rich... 59 8e-08
CR857371_1(CR857371|pid:none) Pongo abelii mRNA; cDNA DKFZp469F1... 59 8e-08
AJ302060_1(AJ302060|pid:none) Oryza sativa mRNA for glycine rich... 59 8e-08
AP008209_2228(AP008209|pid:none) Oryza sativa (japonica cultivar... 59 8e-08
BT084556_1(BT084556|pid:none) Zea mays full-length cDNA clone ZM... 59 8e-08
CR382131_970(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 59 8e-08
CP000472_202(CP000472|pid:none) Shewanella piezotolerans WP3, co... 59 8e-08
AK303668_1(AK303668|pid:none) Homo sapiens cDNA FLJ58561 complet... 59 8e-08
AF011331_1(AF011331|pid:none) Oryza sativa glycine-rich protein ... 59 8e-08
AY995201_1(AY995201|pid:none) Pan troglodytes RBMY1 mRNA, partia... 59 8e-08
AB209294_1(AB209294|pid:none) Homo sapiens mRNA for ELAV (embryo... 59 1e-07
AL837505_1(AL837505|pid:none) Mouse DNA sequence from clone RP23... 59 1e-07
AY035379_1(AY035379|pid:none) Mus musculus ELAV-like neuronal pr... 59 1e-07
CP001037_730(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 59 1e-07
BC094189_1(BC094189|pid:none) Xenopus laevis ELAV (embryonic let... 59 1e-07
I39077(I39077) RNA-binding protein Hel-N2 - human &U29943_1(U29... 59 1e-07
AL837505_7(AL837505|pid:none) Mouse DNA sequence from clone RP23... 59 1e-07
AK141919_1(AK141919|pid:none) Mus musculus 12 days embryo spinal... 59 1e-07
BC127338_1(BC127338|pid:none) Xenopus tropicalis ELAV (embryonic... 59 1e-07
AY035378_1(AY035378|pid:none) Mus musculus ELAV-like neuronal pr... 59 1e-07
AL837505_4(AL837505|pid:none) Mouse DNA sequence from clone RP23... 59 1e-07
CR860401_1(CR860401|pid:none) Pongo abelii mRNA; cDNA DKFZp459N1... 59 1e-07
AL837505_6(AL837505|pid:none) Mouse DNA sequence from clone RP23... 59 1e-07
AL837505_2(AL837505|pid:none) Mouse DNA sequence from clone RP23... 59 1e-07
CP001324_180(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 59 1e-07
BC170539_1(BC170539|pid:none) Xenopus laevis elav like 1, mRNA (... 59 1e-07
AX463221_1(AX463221|pid:none) Sequence 22 from Patent WO0249625.... 59 1e-07
(Q60899) RecName: Full=ELAV-like protein 2; AltName: Full=Hu-ant... 59 1e-07
AL161628_3(AL161628|pid:none) Human DNA sequence from clone RP11... 59 1e-07
(Q12926) RecName: Full=ELAV-like protein 2; AltName: Full=Hu-ant... 59 1e-07
T24068(T24068) hypothetical protein R09B3.3 - Caenorhabditis ele... 59 1e-07
AC134242_21(AC134242|pid:none) Medicago truncatula clone mth2-10... 59 1e-07
AP008231_850(AP008231|pid:none) Synechococcus elongatus PCC 6301... 59 1e-07
AF069682_1(AF069682|pid:none) Homo sapiens testes specific heter... 59 1e-07
BT045197_1(BT045197|pid:none) Salmo salar clone ssal-rgf-514-254... 59 1e-07
AY050483_1(AY050483|pid:none) Prunus avium putative glycine-rich... 59 1e-07
AE010300_3755(AE010300|pid:none) Leptospira interrogans serovar ... 59 1e-07
AE017347_305(AE017347|pid:none) Cryptococcus neoformans var. neo... 59 1e-07
BC041204_1(BC041204|pid:none) Xenopus laevis cold inducible RNA-... 59 1e-07
CR382131_373(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 59 1e-07
AC134242_12(AC134242|pid:none) Medicago truncatula clone mth2-10... 59 1e-07
BT073963_1(BT073963|pid:none) Oncorhynchus mykiss clone omyk-evo... 59 1e-07
BT049685_1(BT049685|pid:none) Salmo salar clone ssal-rgb2-559-08... 59 1e-07
(Q44560) RecName: Full=Putative RNA-binding protein rbpA; &AC18... 59 1e-07
CP000806_3097(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 59 1e-07
AK292271_1(AK292271|pid:none) Homo sapiens cDNA FLJ76931 complet... 59 1e-07
AL583843_2(AL583843|pid:none) Human DNA sequence from clone RP11... 58 2e-07
AL627425_2(AL627425|pid:none) Mouse DNA sequence from clone RP23... 58 2e-07
AL627425_8(AL627425|pid:none) Mouse DNA sequence from clone RP23... 58 2e-07
AL627425_4(AL627425|pid:none) Mouse DNA sequence from clone RP23... 58 2e-07
BC099348_1(BC099348|pid:none) Xenopus laevis RNA-binding protein... 58 2e-07
(P26378) RecName: Full=ELAV-like protein 4; AltName: Full=Parane... 58 2e-07
EU969871_1(EU969871|pid:none) Zea mays clone 336682 glycine-rich... 58 2e-07
CR940353_491(CR940353|pid:none) Theileria annulata strain Ankara... 58 2e-07
AK298817_1(AK298817|pid:none) Homo sapiens cDNA FLJ51957 complet... 58 2e-07
CP000878_14(CP000878|pid:none) Prochlorococcus marinus str. MIT ... 58 2e-07
AL583843_1(AL583843|pid:none) Human DNA sequence from clone RP11... 58 2e-07
BC074599_1(BC074599|pid:none) Xenopus tropicalis transformer-2 a... 58 2e-07
AK005907_1(AK005907|pid:none) Mus musculus adult male testis cDN... 58 2e-07
FB872176_1(FB872176|pid:none) Sequence 91449 from Patent WO20080... 58 2e-07
(O89086) RecName: Full=Putative RNA-binding protein 3; AltName: ... 58 2e-07
BT039258_1(BT039258|pid:none) Zea mays full-length cDNA clone ZM... 58 2e-07
(P10979) RecName: Full=Glycine-rich RNA-binding, abscisic acid-i... 58 2e-07
AF315811_1(AF315811|pid:none) Triticum aestivum RNA-binding prot... 58 2e-07
AF176675_1(AF176675|pid:none) Gallus gallus RNA-binding protein ... 58 2e-07
AE006470_132(AE006470|pid:none) Chlorobium tepidum TLS, complete... 58 2e-07
CP000552_13(CP000552|pid:none) Prochlorococcus marinus str. MIT ... 58 2e-07
AP008213_1538(AP008213|pid:none) Oryza sativa (japonica cultivar... 58 2e-07
BT004860_1(BT004860|pid:none) Drosophila melanogaster RE27227 fu... 58 2e-07
AP008216_335(AP008216|pid:none) Oryza sativa (japonica cultivar-... 58 2e-07
FB872162_1(FB872162|pid:none) Sequence 91435 from Patent WO20080... 58 2e-07
EU971223_1(EU971223|pid:none) Zea mays clone 359846 glycine-rich... 58 2e-07
(P19682) RecName: Full=28 kDa ribonucleoprotein, chloroplastic; ... 58 2e-07
AF041341_1(AF041341|pid:none) Mus musculus RNA binding protein E... 58 2e-07
I51678(I51678) ribonucleoprotein - African clawed frog &U17599_... 58 2e-07
AL583843_3(AL583843|pid:none) Human DNA sequence from clone RP11... 58 2e-07
AK014133_1(AK014133|pid:none) Mus musculus 13 days embryo head c... 58 2e-07
CP000240_298(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-13... 58 2e-07
AE014297_2648(AE014297|pid:none) Drosophila melanogaster chromos... 58 2e-07
(P19683) RecName: Full=31 kDa ribonucleoprotein, chloroplastic; ... 58 2e-07
BT036700_1(BT036700|pid:none) Zea mays full-length cDNA clone ZM... 58 2e-07
AC159426_12(AC159426|pid:none) Trypanosoma brucei chromosome 7 c... 58 2e-07
BC036071_1(BC036071|pid:none) Homo sapiens ELAV (embryonic letha... 58 2e-07
(Q61701) RecName: Full=ELAV-like protein 4; AltName: Full=Parane... 58 2e-07
AK079088_1(AK079088|pid:none) Mus musculus adult male diencephal... 58 2e-07
CP000097_1394(CP000097|pid:none) Synechococcus sp. CC9902, compl... 58 2e-07
BC071467_1(BC071467|pid:none) Danio rerio poly-U binding splicin... 58 2e-07
AK243636_1(AK243636|pid:none) Oryza sativa Japonica Group cDNA, ... 58 2e-07
(Q9H0L4) RecName: Full=Cleavage stimulation factor 64 kDa subuni... 58 2e-07
CP001344_55(CP001344|pid:none) Cyanothece sp. PCC 7425, complete... 58 2e-07
BT085576_1(BT085576|pid:none) Zea mays full-length cDNA clone ZM... 58 2e-07
AK128423_1(AK128423|pid:none) Homo sapiens cDNA FLJ46566 fis, cl... 58 2e-07
Z95327_4(Z95327|pid:none) Human DNA sequence from clone RP3-347M... 58 2e-07
AJ002893_1(AJ002893|pid:none) Oryza sativa mRNA for glycine-rich... 58 2e-07
(Q8C7E9) RecName: Full=Cleavage stimulation factor 64 kDa subuni... 58 2e-07
AL772146_2(AL772146|pid:none) Zebrafish DNA sequence from clone ... 58 2e-07
EF678448_1(EF678448|pid:none) Picea sitchensis clone WS02921_P04... 58 2e-07
EF081993_1(EF081993|pid:none) Picea sitchensis clone WS0276_H13 ... 58 2e-07
BC028239_1(BC028239|pid:none) Homo sapiens cleavage stimulation ... 58 2e-07
BC169065_1(BC169065|pid:none) Rattus norvegicus cleavage stimula... 58 2e-07
AB062911_1(AB062911|pid:none) Physcomitrella patens PpGRP3 mRNA ... 58 2e-07
AP009552_4584(AP009552|pid:none) Microcystis aeruginosa NIES-843... 58 2e-07
(Q6IQE0) RecName: Full=Poly(U)-binding-splicing factor PUF60-B; ... 58 2e-07
AE017285_2203(AE017285|pid:none) Desulfovibrio vulgaris subsp. v... 58 2e-07
AP004384_18(AP004384|pid:none) Oryza sativa Japonica Group genom... 58 2e-07
AK084696_1(AK084696|pid:none) Mus musculus 13 days embryo heart ... 58 2e-07
AB062910_1(AB062910|pid:none) Physcomitrella patens PpGRP2 mRNA ... 58 2e-07
BX548175_14(BX548175|pid:none) Prochlorococcus marinus MIT9313 c... 57 3e-07
AY085838_1(AY085838|pid:none) Arabidopsis thaliana clone 18903 m... 57 3e-07
EU956408_1(EU956408|pid:none) Zea mays clone 1562489 plastid-spe... 57 3e-07
CP000096_993(CP000096|pid:none) Pelodictyon luteolum DSM 273, co... 57 3e-07
AL671915_5(AL671915|pid:none) Mouse DNA sequence from clone RP23... 57 3e-07
BA000039_2254(BA000039|pid:none) Thermosynechococcus elongatus B... 57 3e-07
CP000348_2308(CP000348|pid:none) Leptospira borgpetersenii serov... 57 3e-07
(Q5RDA3) RecName: Full=Cleavage stimulation factor 64 kDa subuni... 57 3e-07
BC126543_1(BC126543|pid:none) Bos taurus cleavage stimulation fa... 57 3e-07
AK319051_1(AK319051|pid:none) Arabidopsis thaliana AT2G21660 mRN... 57 3e-07
BX323559_6(BX323559|pid:none) Zebrafish DNA sequence from clone ... 57 3e-07
AC013483_34(AC013483|pid:none) Arabidopsis thaliana chromosome I... 57 3e-07
(Q8HXM1) RecName: Full=Cleavage stimulation factor 64 kDa subuni... 57 3e-07
CP000447_127(CP000447|pid:none) Shewanella frigidimarina NCIMB 4... 57 3e-07
AF357912_1(AF357912|pid:none) Labeo rohita ribonucleoprotein mRN... 57 3e-07
EU616680_1(EU616680|pid:none) Mus musculus betaCstF-64 variant 3... 57 3e-07
BX323559_10(BX323559|pid:none) Zebrafish DNA sequence from clone... 57 3e-07
CP000140_908(CP000140|pid:none) Parabacteroides distasonis ATCC ... 57 3e-07
EF083658_1(EF083658|pid:none) Picea sitchensis clone WS0286_I17 ... 57 3e-07
EU616682_1(EU616682|pid:none) Mus musculus betaCstF-64 variant 1... 57 3e-07
CP001575_571(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 57 3e-07
CP000507_194(CP000507|pid:none) Shewanella amazonensis SB2B, com... 57 3e-07
AP001297_2(AP001297|pid:none) Arabidopsis thaliana genomic DNA, ... 57 3e-07
CP000931_4116(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 57 3e-07
AJ719664_1(AJ719664|pid:none) Gallus gallus mRNA for hypothetica... 57 3e-07
EF148189_1(EF148189|pid:none) Populus trichocarpa clone WS0128_I... 57 3e-07
BC033135_1(BC033135|pid:none) Homo sapiens, Similar to cleavage ... 57 3e-07
AK032817_1(AK032817|pid:none) Mus musculus 12 days embryo male w... 57 3e-07
BX323559_5(BX323559|pid:none) Zebrafish DNA sequence from clone ... 57 3e-07
CP000554_14(CP000554|pid:none) Prochlorococcus marinus str. MIT ... 57 3e-07
BC041291_1(BC041291|pid:none) Xenopus laevis cleavage stimulatio... 57 3e-07
(Q99070) RecName: Full=Glycine-rich RNA-binding protein 2; &FB8... 57 3e-07
(Q9ZUU4) RecName: Full=Putative ribonucleoprotein At2g37220, chl... 57 4e-07
CR457257_1(CR457257|pid:none) Homo sapiens full open reading fra... 57 4e-07
AC134242_17(AC134242|pid:none) Medicago truncatula clone mth2-10... 57 4e-07
CR857074_1(CR857074|pid:none) Pongo abelii mRNA; cDNA DKFZp468L0... 57 4e-07
AF005359_1(AF005359|pid:none) Nicotiana glutinosa RNA-binding pr... 57 4e-07
(Q9UHX1) RecName: Full=Poly(U)-binding-splicing factor PUF60; Al... 57 4e-07
BC011265_1(BC011265|pid:none) Homo sapiens poly-U binding splici... 57 4e-07
EU569289_1(EU569289|pid:none) Nicotiana tabacum glycine-rich RNA... 57 4e-07
BC009734_1(BC009734|pid:none) Homo sapiens poly-U binding splici... 57 4e-07
AF165892_1(AF165892|pid:none) Rattus norvegicus RNA-binding prot... 57 4e-07
(Q9V3G3) RecName: Full=Peptidyl-prolyl cis-trans isomerase E; ... 57 4e-07
EU959070_1(EU959070|pid:none) Zea mays clone 210066 hypothetical... 57 4e-07
(P49313) RecName: Full=30 kDa ribonucleoprotein, chloroplastic; ... 57 4e-07
FB872092_1(FB872092|pid:none) Sequence 91365 from Patent WO20080... 57 4e-07
BC119437_1(BC119437|pid:none) Mus musculus poly-U binding splici... 57 4e-07
AF217197_1(AF217197|pid:none) Homo sapiens FBP-interacting repre... 57 4e-07
(Q5R469) RecName: Full=Poly(U)-binding-splicing factor PUF60; Al... 57 4e-07
AK151526_1(AK151526|pid:none) Mus musculus bone marrow macrophag... 57 4e-07
CP001197_193(CP001197|pid:none) Desulfovibrio vulgaris str. 'Miy... 57 4e-07
BC057796_1(BC057796|pid:none) Homo sapiens RNA binding motif pro... 57 4e-07
(Q2HJG2) RecName: Full=Poly(U)-binding-splicing factor PUF60; Al... 57 4e-07
AY088648_1(AY088648|pid:none) Arabidopsis thaliana clone 8849 mR... 57 4e-07
CP000777_2648(CP000777|pid:none) Leptospira biflexa serovar Pato... 57 4e-07
AF310215_1(AF310215|pid:none) Sorghum bicolor glycine-rich RNA-b... 57 4e-07
U51586_1(U51586|pid:none) Human siah binding protein 1 (SiahBP1)... 57 4e-07
AF389431_1(AF389431|pid:none) Solanum tuberosum single-stranded ... 57 4e-07
AK149632_1(AK149632|pid:none) Mus musculus bone marrow macrophag... 57 4e-07
CP000644_1611(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 57 5e-07
(Q6PFR5) RecName: Full=Transformer-2 protein homolog alpha; AltN... 57 5e-07
CP001344_1126(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 57 5e-07
AF009411_1(AF009411|pid:none) Oryza sativa glycine-rich RNA-bind... 57 5e-07
FN357314_32(FN357314|pid:none) Schistosoma mansoni genome sequen... 57 5e-07
CP000838_71(CP000838|pid:none) Acaryochloris marina MBIC11017 pl... 57 5e-07
BC161978_1(BC161978|pid:none) Rattus norvegicus transformer-2 al... 57 5e-07
AJ441311_1(AJ441311|pid:none) Rumex obtusifolius mRNA for putati... 57 5e-07
(O13829) RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa... 57 5e-07
BC065442_1(BC065442|pid:none) Danio rerio cleavage stimulation f... 57 5e-07
DQ972958_1(DQ972958|pid:none) Sus scrofa TRA2A mRNA, complete cds. 57 5e-07
BT087787_1(BT087787|pid:none) Zea mays full-length cDNA clone ZM... 57 5e-07
BT058737_1(BT058737|pid:none) Salmo salar clone ssal-rgf-002-150... 57 5e-07
CP000462_1744(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 57 5e-07
AJ719598_1(AJ719598|pid:none) Gallus gallus mRNA for hypothetica... 57 5e-07
AB173584_1(AB173584|pid:none) Macaca fascicularis brain cDNA clo... 57 5e-07
AJ421781_1(AJ421781|pid:none) Persea americana chloroplast mRNA ... 57 5e-07
AB026847_1(AB026847|pid:none) Ciona intestinalis CiGRP1 mRNA for... 57 5e-07
DQ296176_1(DQ296176|pid:none) Brassica rapa clone 34 unknown mRNA. 57 5e-07
L25435_1(L25435|pid:none) Synechococcus sp. RNA-binding protein ... 57 5e-07
AC092557_8(AC092557|pid:none) Oryza sativa chromosome 3 BAC OSJN... 57 5e-07
FM954972_2809(FM954972|pid:none) Vibrio splendidus LGP32 chromos... 57 5e-07
AB299206_1(AB299206|pid:none) Rana rugosa Tra2 mRNA for transfor... 57 5e-07
AP003800_19(AP003800|pid:none) Oryza sativa Japonica Group genom... 57 5e-07
EU797611_1(EU797611|pid:none) Ovis aries TRA2A mRNA, complete cds. 57 5e-07
AM478333_2(AM478333|pid:none) Vitis vinifera contig VV78X160178.... 57 5e-07
AC007047_21(AC007047|pid:none) Arabidopsis thaliana chromosome 2... 56 7e-07
(Q60900) RecName: Full=ELAV-like protein 3; AltName: Full=Hu-ant... 56 7e-07
FN357347_16(FN357347|pid:none) Schistosoma mansoni genome sequen... 56 7e-07
(Q9V535) RecName: Full=RNA-binding protein 8A; AltName: Full=Pro... 56 7e-07
CP000576_13(CP000576|pid:none) Prochlorococcus marinus str. MIT ... 56 7e-07
CP000542_149(CP000542|pid:none) Verminephrobacter eiseniae EF01-... 56 7e-07
AF176674_1(AF176674|pid:none) Gallus gallus RNA-binding protein ... 56 7e-07
AE017282_947(AE017282|pid:none) Methylococcus capsulatus str. Ba... 56 7e-07
BT040007_1(BT040007|pid:none) Zea mays full-length cDNA clone ZM... 56 7e-07
DQ497201_1(DQ497201|pid:none) Bombyx mori cleavage stimulation f... 56 7e-07
AE010300_1919(AE010300|pid:none) Leptospira interrogans serovar ... 56 7e-07
CP000503_3631(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 56 7e-07
AJ249323_1(AJ249323|pid:none) Ciona intestinalis mRNA for glycin... 56 7e-07
CP000851_166(CP000851|pid:none) Shewanella pealeana ATCC 700345,... 56 9e-07
(Q9SVM8) RecName: Full=Glycine-rich RNA-binding protein 2, mitoc... 56 9e-07
AY036909_1(AY036909|pid:none) Homo sapiens HUC (ELAVL3) mRNA, co... 56 9e-07
AY016023_9(AY016023|pid:none) Sphoeroides nephelus alpha globin ... 56 9e-07
BC122593_1(BC122593|pid:none) Bos taurus RNA binding motif prote... 56 9e-07
AM920431_1448(AM920431|pid:none) Penicillium chrysogenum Wiscons... 56 9e-07
CU640366_1180(CU640366|pid:none) Podospora anserina genomic DNA ... 56 9e-07
CR761704_1(CR761704|pid:none) Xenopus tropicalis finished cDNA, ... 56 9e-07
EF576487_1(EF576487|pid:none) Oryza sativa (indica cultivar-grou... 56 9e-07
S31443(S31443) glycine-rich RNA-binding protein (clone A81) - Ar... 56 9e-07
AX463223_1(AX463223|pid:none) Sequence 24 from Patent WO0249625.... 56 9e-07
AF036339_1(AF036339|pid:none) Euphorbia esula glycine-rich RNA-b... 56 9e-07
BC065343_1(BC065343|pid:none) Danio rerio ELAV (embryonic lethal... 56 9e-07
FN357312_50(FN357312|pid:none) Schistosoma mansoni genome sequen... 56 9e-07
BC136134_1(BC136134|pid:none) Xenopus tropicalis ELAV (embryonic... 56 9e-07
AP004339_10(AP004339|pid:none) Oryza sativa Japonica Group genom... 56 9e-07
FJ527019_1(FJ527019|pid:none) Macaca mulatta truncated RNA bindi... 55 1e-06
CP000685_1297(CP000685|pid:none) Flavobacterium johnsoniae UW101... 55 1e-06
BT035887_1(BT035887|pid:none) Zea mays full-length cDNA clone ZM... 55 1e-06
BC093329_1(BC093329|pid:none) Danio rerio peptidylprolyl isomera... 55 1e-06
EF082522_1(EF082522|pid:none) Picea sitchensis clone WS0297_G20 ... 55 1e-06
AM451268_1(AM451268|pid:none) Vitis vinifera contig VV78X095284.... 55 1e-06
EF085052_1(EF085052|pid:none) Picea sitchensis clone WS0286_P07 ... 55 1e-06
AP007157_331(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 55 1e-06
CP001291_1633(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 55 1e-06
X57955_1(X57955|pid:none) S.oleracea mRNA for a 28kD RNA binding... 55 1e-06
BC158521_1(BC158521|pid:none) Xenopus tropicalis hypothetical pr... 55 1e-06
BC165323_1(BC165323|pid:none) Danio rerio peptidylprolyl isomera... 55 1e-06
AB159268_1(AB159268|pid:none) Oryzias latipes Tra2a2 mRNA for tr... 55 1e-06
CP000473_7431(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 55 1e-06
EF451972_1(EF451972|pid:none) Trypanosoma cruzi RNA binding prot... 55 2e-06
AF176673_1(AF176673|pid:none) Gallus gallus RNA-binding protein ... 55 2e-06
AK301013_1(AK301013|pid:none) Homo sapiens cDNA FLJ60076 complet... 55 2e-06
CP001392_3422(CP001392|pid:none) Diaphorobacter sp. TPSY, comple... 55 2e-06
(Q60990) RecName: Full=RNA-binding motif protein, Y chromosome, ... 55 2e-06
AY398424_1(AY398424|pid:none) Danio rerio clone RK068A2A06 TIA1 ... 55 2e-06
EU963124_1(EU963124|pid:none) Zea mays clone 257985 unknown mRNA. 55 2e-06
FB912277_1(FB912277|pid:none) Sequence 131550 from Patent WO2008... 55 2e-06
AY071005_1(AY071005|pid:none) Drosophila melanogaster RE09075 fu... 55 2e-06
FB912193_1(FB912193|pid:none) Sequence 131466 from Patent WO2008... 55 2e-06
CP000444_175(CP000444|pid:none) Shewanella sp. MR-7, complete ge... 55 2e-06
CP000606_139(CP000606|pid:none) Shewanella loihica PV-4, complet... 55 2e-06
FB912189_1(FB912189|pid:none) Sequence 131462 from Patent WO2008... 55 2e-06
BX548174_1580(BX548174|pid:none) Prochlorococcus marinus MED4 co... 55 2e-06
BT043341_1(BT043341|pid:none) Zea mays full-length cDNA clone ZM... 55 2e-06
AB168603_1(AB168603|pid:none) Macaca fascicularis testis cDNA cl... 55 2e-06
BC102495_1(BC102495|pid:none) Bos taurus ELAV (embryonic lethal,... 55 2e-06
FB912191_1(FB912191|pid:none) Sequence 131464 from Patent WO2008... 55 2e-06
BT049179_1(BT049179|pid:none) Salmo salar clone ssal-eve-534-355... 55 2e-06
FB912185_1(FB912185|pid:none) Sequence 131458 from Patent WO2008... 55 2e-06
BT053782_1(BT053782|pid:none) Zea mays full-length cDNA clone ZM... 55 2e-06
AM502244_74(AM502244|pid:none) Leishmania infantum chromosome 26. 55 2e-06
AL844509_578(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 55 2e-06
BT064695_1(BT064695|pid:none) Zea mays full-length cDNA clone ZM... 55 2e-06
CP000108_1527(CP000108|pid:none) Chlorobium chlorochromatii CaD3... 55 2e-06
AK069121_1(AK069121|pid:none) Oryza sativa Japonica Group cDNA c... 55 2e-06
(O35698) RecName: Full=RNA-binding motif protein, Y chromosome, ... 55 2e-06
BC150670_1(BC150670|pid:none) Mus musculus RNA binding motif pro... 55 2e-06
(P39697) RecName: Full=40S ribosomal protein S19, mitochondrial;... 55 2e-06
AY754868_1(AY754868|pid:none) Haemonchus contortus cyclophilin m... 55 2e-06
BC154770_1(BC154770|pid:none) Danio rerio RNA binding motif prot... 55 2e-06
CT005265_75(CT005265|pid:none) Leishmania major strain Friedlin,... 55 2e-06
BT076979_1(BT076979|pid:none) Caligus rogercresseyi clone crog-e... 55 2e-06
AP006841_2720(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 55 2e-06
BC075875_1(BC075875|pid:none) Danio rerio RNA binding motif prot... 55 2e-06
T23960(T23960) hypothetical protein R06C1.4 - Caenorhabditis ele... 55 2e-06
AF042385_1(AF042385|pid:none) Homo sapiens cyclophilin-33A (CYP-... 54 3e-06
AK089088_1(AK089088|pid:none) Mus musculus 2 days neonate thymus... 54 3e-06
(P70372) RecName: Full=ELAV-like protein 1; AltName: Full=Hu-ant... 54 3e-06
AP008210_632(AP008210|pid:none) Oryza sativa (japonica cultivar-... 54 3e-06
AF042386_1(AF042386|pid:none) Homo sapiens cyclophilin-33B (CYP-... 54 3e-06
>AK160232_1(AK160232|pid:none) Mus musculus 11 days embryo whole
body cDNA, RIKEN full-length enriched library,
clone:2700089A17 product:Similar to CGI-79 protein
(Similar to RNA-binding protein) homolog [Mus musculus],
full insert sequence.
Length = 165
Score = 150 bits (379), Expect = 3e-35
Identities = 62/115 (53%), Positives = 93/115 (80%)
Frame = +3
Query: 138 RIREVQNINKKELNLNISESASWHADYSHSPYIYVGGLNYDLNEGDVIAIFSQYGEISEC 317
+++ + +N++E+ L ++E SWH++Y HS +I+VGGL Y+L EGD+I +FSQYGEI
Sbjct: 6 KVKLINELNEREVQLGVAEKVSWHSEYKHSAWIFVGGLPYELTEGDIICVFSQYGEIVNI 65
Query: 318 NLVRNKETGRSQGFCFVGYDQQKSTVLAVDNLNGINLLGKTIKVDHVKDYKRPKK 482
NLVR+K+TG+S+GFCF+ Y+ Q+STVLAVDN NGI + G+TI+VDHV +Y+ P++
Sbjct: 66 NLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPQE 120
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 591,153,787
Number of extensions: 9145706
Number of successful extensions: 28556
Number of sequences better than 10.0: 3332
Number of HSP's gapped: 28264
Number of HSP's successfully gapped: 4449
Length of query: 204
Length of database: 1,051,180,864
Length adjustment: 122
Effective length of query: 82
Effective length of database: 656,320,666
Effective search space: 53818294612
Effective search space used: 53818294612
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
1 |
| AF (FL, S) |
1 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |