| Contig-U13788-1 |
| Contig ID |
Contig-U13788-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
400 |
| Chromosome number (1..6, M) |
4 |
| Chromosome length |
5430582 |
| Start point |
2687794 |
| End point |
2687420 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
1 |
| Number of EST |
1 |
| Link to clone list |
U13788 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.12.14 |
| Homology vs DNA |
Query= Contig-U13788-1 (Contig-U13788-1Q) /CSM_Contig/Contig-U13788-1Q.Seq.d
(400 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ427108) Dictyostelium discoideum cDNA clone:ddv61g07, 5' ... 771 0.0 1
(EB084719) 1973 CM334 Root cDNA Capsicum annuum cDNA clone R... 58 7e-14 3
(AJ597961) Arabidopsis thaliana T-DNA flanking sequence, lef... 68 6e-10 2
(AK228904) Arabidopsis thaliana mRNA for 5-oxoprolinase -lik... 60 1e-08 3
(BT004510) Arabidopsis thaliana At5g37830/K22F20_70 gene, co... 60 2e-08 3
(AY102096) Arabidopsis thaliana AT5g37830/K22F20_70 mRNA, co... 60 2e-08 3
(ED521521) KBrB109A05F KBrB, Brassica rapa BamHI BAC library... 62 5e-08 2
(EJ941349) 1093018867424 Global-Ocean-Sampling_GS-30-02-01-1... 44 5e-08 3
(ER618189) 1093017359443 Global-Ocean-Sampling_GS-36-01-01-2... 44 6e-08 3
(DY885544) CeleSEQ828 Cunninghamella elegans pBluescript (Ec... 44 2e-07 3
(AM514506) Paracentrotus lividus EST, clone MPMGp1171C0519Q,... 46 5e-07 2
(AB016873) Arabidopsis thaliana genomic DNA, chromosome 5, T... 60 3e-06 3
(FK092719) XABT144006.b1 Gateway compatible cien cDNA librar... 44 7e-06 2
(AL429548) clone BA0AB032C09 of library BA0AB from strain CL... 48 8e-06 2
(AL428705) clone BA0AB027C12 of library BA0AB from strain CL... 48 8e-06 2
(AL429969) clone BA0AB034H08 of library BA0AB from strain CL... 48 9e-06 2
(CS224983) Sequence 1298 from Patent WO2005111217. 58 2e-05 2
(EG649840) D101C-AD3 Ethylene Induced Tobacco Leaf cDNA Libr... 58 2e-05 2
(AP008207) Oryza sativa (japonica cultivar-group) genomic DN... 60 6e-05 1
(AP004365) Oryza sativa Japonica Group genomic DNA, chromoso... 60 6e-05 1
(AK120106) Oryza sativa Japonica Group cDNA clone:J013023K07... 60 6e-05 1
(AK067542) Oryza sativa Japonica Group cDNA clone:J013110L13... 60 6e-05 1
(EA701122) Sequence 80001 from patent US 7365185. 60 6e-05 1
(AL405626) T3 end of clone AU0AA005D07 of library AU0AA from... 60 6e-05 1
(AF170310) AF170310 Saccharomyces kluyveri NRRL Y-12651 Lach... 60 6e-05 1
(EJ579922) 1092960147157 Global-Ocean-Sampling_GS-29-01-01-1... 58 2e-04 1
(EJ570856) 1092960038398 Global-Ocean-Sampling_GS-29-01-01-1... 58 2e-04 1
(EJ088073) 1095460133537 Global-Ocean-Sampling_GS-26-01-01-1... 58 2e-04 1
(AP010151) Lotus japonicus genomic DNA, clone: LjT38L02, TM1... 54 0.004 1
(AM269972) Aspergillus niger contig An01c0250, complete genome. 50 0.060 1
(EK031005) 1092955407768 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.060 1
(EJ409172) 1093012122644 Global-Ocean-Sampling_GS-28-01-01-1... 50 0.060 1
(EJ291929) 1095386003642 Global-Ocean-Sampling_GS-27-01-01-1... 50 0.060 1
(CJ455923) Macaca fascicularis mRNA, clone: QflA-21736, 5' e... 50 0.060 1
(CI164143) Oryza sativa Japonica Group cDNA, clone: 031-M027... 38 0.23 2
(AM433445) Vitis vinifera, whole genome shotgun sequence, co... 46 0.24 3
(AC139345) Papio anubis clone rp41-256p17, complete sequence. 48 0.24 1
(CR382123) Kluyveromyces lactis strain NRRL Y-1140 chromosom... 48 0.24 1
(FC856288) CAMCEP226b07 camce Biomphalaria glabrata cDNA clo... 48 0.24 1
(CJ451081) Macaca fascicularis mRNA, clone: QflA-16671, 5' e... 36 0.33 2
(CJ450708) Macaca fascicularis mRNA, clone: QflA-16282, 5' e... 36 0.33 2
(CJ493475) Macaca fascicularis mRNA, clone: QtsA-21547, 5' e... 38 0.33 2
(EJ940328) 1093018861952 Global-Ocean-Sampling_GS-30-02-01-1... 42 0.33 2
(AP007171) Aspergillus oryzae RIB40 genomic DNA, SC011. 46 0.94 1
(AM270272) Aspergillus niger contig An12c0160, complete genome. 46 0.94 1
(AC144517) Medicago truncatula clone mth2-13k17, complete se... 46 0.94 1
(AB078814) Aspergillus oryzae NMH gene for hypothetical N-me... 46 0.94 1
(AC224485) Bos taurus clone CH240-484A19, WORKING DRAFT SEQU... 46 0.94 1
(AC220257) Bos taurus clone CH240-367M18, WORKING DRAFT SEQU... 46 0.94 1
(AC167914) Bos taurus clone CH240-213P19, WORKING DRAFT SEQU... 46 0.94 1
(FI180315) MUGQ_CH252P127B13Sp6_GL472_063 CHORI-252 Vervet M... 46 0.94 1
(EJ394184) 1093011986096 Global-Ocean-Sampling_GS-28-01-01-1... 46 0.94 1
(CZ766461) OC__Ba0122A20.r OC__Ba Oryza coarctata genomic cl... 46 0.94 1
(DW481335) GH_RMIRS_030_C06_R Cotton Normalized Library rand... 46 0.94 1
(DW481334) GH_RMIRS_030_C06_044_F Cotton Normalized Library ... 46 0.94 1
(CX535315) s13dNF39D06MJ058_388803 Methyl Jasmonate-Elicited... 46 0.94 1
(CV537955) NOD_248_E05 Phaseolus vulgaris nodule EST library... 46 0.94 1
(CJ489041) Macaca fascicularis mRNA, clone: QtsA-16774, 5' e... 46 0.94 1
(CJ489009) Macaca fascicularis mRNA, clone: QtsA-16742, 5' e... 46 0.94 1
(CJ480480) Macaca fascicularis mRNA, clone: QtrA-15980, 5' e... 46 0.94 1
(CJ467662) Macaca fascicularis mRNA, clone: QnpA-17218, 5' e... 46 0.94 1
(CJ449231) Macaca fascicularis mRNA, clone: QflA-14739, 5' e... 46 0.94 1
(CJ436420) Macaca fascicularis mRNA, clone: QccE-13531, 5' e... 46 0.94 1
(BJ387478) Dictyostelium discoideum cDNA clone:dds2i20, 5' e... 46 0.94 1
(EY825506) PT11-C1-901-075-B07-CT.F Poncirus trifoliata leaf... 46 0.94 1
(EJ380325) 1092963759945 Global-Ocean-Sampling_GS-28-01-01-1... 40 1.2 2
(CJ442941) Macaca fascicularis mRNA, clone: QccE-20476, 5' e... 32 2.5 2
(AC138115) Mus musculus BAC clone RP24-241G8 from chromosome... 40 2.9 2
(BJ411695) Dictyostelium discoideum cDNA clone:ddv5n07, 5' e... 40 3.0 2
(AC149223) Mus musculus BAC clone RP23-203K1 from chromosome... 40 3.6 2
(AC213224) Homo sapiens chromosome 4 clone ABC7_000042405300... 44 3.7 1
(AC093829) Homo sapiens BAC clone RP11-401E5 from 4, complet... 44 3.7 1
(AC221874) Bos taurus clone CH240-380H22, WORKING DRAFT SEQU... 44 3.7 1
(AC221873) Bos taurus clone CH240-380H10, WORKING DRAFT SEQU... 44 3.7 1
(AC215683) Zea mays chromosome 3 clone CH201-206F20; ZMMBBc0... 44 3.7 1
(AC173584) Bos taurus clone CH240-348N23, WORKING DRAFT SEQU... 44 3.7 1
(AC013296) Homo sapiens clone RP11-3M18, LOW-PASS SEQUENCE S... 44 3.7 1
(AC012582) Homo sapiens clone RP11-3C24, *** SEQUENCING IN P... 44 3.7 1
(EJ353294) 1092963609782 Global-Ocean-Sampling_GS-28-01-01-1... 44 3.7 1
(EI863639) CAH1-31P21TR CAA1Ba Cicer arietinum genomic clone... 44 3.7 1
(CC372493) PUHCH36TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 44 3.7 1
(CC372490) PUHCH36TB ZM_0.6_1.0_KB Zea mays genomic clone ZM... 44 3.7 1
(EV021831) BNSCS2CT_UP_082_H10_19APR2007_066 Brassica napus ... 44 3.7 1
(EE563652) BNZB_UP_098_A10_07JUN2004_080 Brassica napus BNZB... 44 3.7 1
(CJ489011) Macaca fascicularis mRNA, clone: QtsA-16744, 5' e... 44 3.7 1
(CJ487236) Macaca fascicularis mRNA, clone: QtsA-14893, 5' e... 44 3.7 1
(CJ481330) Macaca fascicularis mRNA, clone: QtrA-16976, 5' e... 44 3.7 1
(CJ475692) Macaca fascicularis mRNA, clone: QorA-16029, 5' e... 44 3.7 1
(CJ463536) Macaca fascicularis mRNA, clone: QnpA-11893, 5' e... 44 3.7 1
(CJ450762) Macaca fascicularis mRNA, clone: QflA-16340, 5' e... 44 3.7 1
(CJ443760) Macaca fascicularis mRNA, clone: QccE-21332, 5' e... 44 3.7 1
(CJ436651) Macaca fascicularis mRNA, clone: QccE-13770, 5' e... 44 3.7 1
(AI352745) MB57-11A PZ204.BNlib Brassica napus cDNA clone pM... 44 3.7 1
(BJ387790) Dictyostelium discoideum cDNA clone:dds5c02, 5' e... 44 3.7 1
(EY232054) CATW6409.fwd CATW Aspergillus niger Pelleted fung... 44 3.7 1
(AC147083) Mus musculus BAC clone RP23-349M16 from chromosom... 40 3.7 2
(EI012775) bb56c03.f Dekkera bruxellensis Random Genomic Lib... 40 4.1 2
(CJ467711) Macaca fascicularis mRNA, clone: QnpA-17271, 5' e... 40 4.5 2
(CJ450860) Macaca fascicularis mRNA, clone: QflA-16442, 5' e... 34 4.5 2
(CJ488050) Macaca fascicularis mRNA, clone: QtsA-15743, 5' e... 34 4.7 2
>(BJ427108) Dictyostelium discoideum cDNA clone:ddv61g07, 5' end,
single read.
Length = 391
Score = 771 bits (389), Expect = 0.0
Identities = 389/389 (100%)
Strand = Plus / Plus
Query: 1 actgttggcctactggcaatgattaaagcagtaccaagaggtttaacaagttgtgtagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actgttggcctactggcaatgattaaagcagtaccaagaggtttaacaagttgtgtagat 60
Query: 61 gcatatttgacaccattaattgaattgtatattaaaaactttacaaaaggattcgatagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcatatttgacaccattaattgaattgtatattaaaaactttacaaaaggattcgatagt 120
Query: 121 aatattggtgatgttgatatttcatttatgatgagtgatggtggtttatgtccagttgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatattggtgatgttgatatttcatttatgatgagtgatggtggtttatgtccagttgat 180
Query: 181 tcatttagaggttttagatcaattttatcaggtccagctggtggtgtagttggttattca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcatttagaggttttagatcaattttatcaggtccagctggtggtgtagttggttattca 240
Query: 241 aaaactacttcaactgtaattgaatcacataaaaacaacaatggcaataatgaaattaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaaactacttcaactgtaattgaatcacataaaaacaacaatggcaataatgaaattaaa 300
Query: 301 caacaaccaataattggatttgatatgggtggtacatcaacagatgttagtagatataat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caacaaccaataattggatttgatatgggtggtacatcaacagatgttagtagatataat 360
Query: 361 ggaacattggatcatgtttttgaaactga 389
|||||||||||||||||||||||||||||
Sbjct: 361 ggaacattggatcatgtttttgaaactga 389
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 475,032,600
Number of extensions: 29029670
Number of successful extensions: 2467216
Number of sequences better than 10.0: 133
Length of query: 400
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 377
Effective length of database: 93,106,754,628
Effective search space: 35101246494756
Effective search space used: 35101246494756
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
|
| protein update |
2009. 7. 8 |
| Homology vs Protein |
Query= Contig-U13788-1 (Contig-U13788-1Q) /CSM_Contig/Contig-U13788-1Q.Seq.d
(400 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q54NW6) RecName: Full=5-oxoprolinase; EC=3.5.2.9; AltN... 254 5e-67
(O14841) RecName: Full=5-oxoprolinase; EC=3.5.2.9; AltN... 140 2e-32
AK158391_1(AK158391|pid:none) Mus musculus adult inner ear cDNA,... 139 2e-32
(P97608) RecName: Full=5-oxoprolinase; EC=3.5.2.9; AltN... 139 4e-32
CP000586_203(CP000586|pid:none) Ostreococcus lucimarinus CCE9901... 137 1e-31
BC125692_1(BC125692|pid:none) Xenopus tropicalis hypothetical pr... 136 2e-31
AK228904_1(AK228904|pid:none) Arabidopsis thaliana mRNA for 5-ox... 133 2e-30
AB016873_10(AB016873|pid:none) Arabidopsis thaliana genomic DNA,... 133 2e-30
AC025715_10(AC025715|pid:none) Caenorhabditis elegans cosmid Y38... 132 3e-30
CR954206_231(CR954206|pid:none) Ostreococcus tauri strain OTTH05... 132 3e-30
CP001575_8(CP001575|pid:none) Micromonas sp. RCC299 chromosome 8... 129 3e-29
AC144517_12(AC144517|pid:none) Medicago truncatula clone mth2-13... 127 1e-28
AM270272_51(AM270272|pid:none) Aspergillus niger contig An12c016... 127 1e-28
AK120106_1(AK120106|pid:none) Oryza sativa Japonica Group cDNA c... 126 3e-28
AM920437_1668(AM920437|pid:none) Penicillium chrysogenum Wiscons... 125 6e-28
AM920428_551(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 124 8e-28
AJ439398_7(AJ439398|pid:none) Anopheles gambiae BAC clone 22J3. 122 5e-27
AM270158_34(AM270158|pid:none) Aspergillus niger contig An08c003... 119 2e-26
BX294012_6(BX294012|pid:none) Neurospora crassa DNA linkage grou... 117 9e-26
(P28273) RecName: Full=Uncharacterized protein YKL215C; &S38058... 117 9e-26
AE017345_535(AE017345|pid:none) Cryptococcus neoformans var. neo... 117 9e-26
AM920435_1212(AM920435|pid:none) Penicillium chrysogenum Wiscons... 115 4e-25
(Q10094) RecName: Full=Uncharacterized protein C11D3.15; &CU329... 115 6e-25
CU928169_16(CU928169|pid:none) Kluyveromyces thermotolerans stra... 113 2e-24
AP009179_861(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic D... 112 4e-24
CT005257_104(CT005257|pid:none) Leishmania major strain Friedlin... 112 5e-24
AM920437_29(AM920437|pid:none) Penicillium chrysogenum Wisconsin... 112 5e-24
CR382131_101(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 112 5e-24
AP007174_361(AP007174|pid:none) Aspergillus oryzae RIB40 genomic... 111 7e-24
CP000496_403(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 111 9e-24
(Q10093) RecName: Full=Uncharacterized protein C11D3.14c; &CU32... 108 4e-23
AE017343_266(AE017343|pid:none) Cryptococcus neoformans var. neo... 108 4e-23
CU928179_8(CU928179|pid:none) Zygosaccharomyces rouxii strain CB... 108 4e-23
FM992689_274(FM992689|pid:none) Candida dubliniensis CD36 chromo... 107 2e-22
CR380957_3(CR380957|pid:none) Candida glabrata strain CBS138 chr... 106 2e-22
AP009178_1772(AP009178|pid:none) Nitratiruptor sp. SB155-2 genom... 99 6e-20
CP000272_4(CP000272|pid:none) Burkholderia xenovorans LB400 chro... 97 2e-19
CP000912_611(CP000912|pid:none) Brucella suis ATCC 23445 chromos... 96 3e-19
CP000709_561(CP000709|pid:none) Brucella ovis ATCC 25840 chromos... 96 4e-19
AE008918_603(AE008918|pid:none) Brucella melitensis 16M chromoso... 96 4e-19
AE017224_512(AE017224|pid:none) Brucella abortus biovar 1 str. 9... 96 4e-19
AE014292_656(AE014292|pid:none) Brucella suis 1330 chromosome II... 96 4e-19
CP000615_710(CP000615|pid:none) Burkholderia vietnamiensis G4 ch... 96 5e-19
CP000300_2018(CP000300|pid:none) Methanococcoides burtonii DSM 6... 96 5e-19
AP009384_168(AP009384|pid:none) Azorhizobium caulinodans ORS 571... 95 7e-19
CP001392_1355(CP001392|pid:none) Diaphorobacter sp. TPSY, comple... 95 7e-19
CP000542_2850(CP000542|pid:none) Verminephrobacter eiseniae EF01... 94 1e-18
AP009386_198(AP009386|pid:none) Burkholderia multivorans ATCC 17... 94 1e-18
CP000539_2385(CP000539|pid:none) Acidovorax sp. JS42, complete g... 94 1e-18
CP000774_2393(CP000774|pid:none) Parvibaculum lavamentivorans DS... 94 1e-18
CP001635_3245(CP001635|pid:none) Variovorax paradoxus S110 chrom... 94 2e-18
CP000152_2568(CP000152|pid:none) Burkholderia sp. 383 chromosome... 93 3e-18
CP000127_348(CP000127|pid:none) Nitrosococcus oceani ATCC 19707,... 92 4e-18
AM747721_584(AM747721|pid:none) Burkholderia cenocepacia J2315 c... 92 4e-18
CP000739_524(CP000739|pid:none) Sinorhizobium medicae WSM419 pla... 92 6e-18
AM408590_304(AM408590|pid:none) Mycobacterium bovis BCG Pasteur ... 92 6e-18
CP000884_4958(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 92 7e-18
CP000459_378(CP000459|pid:none) Burkholderia cenocepacia HI2424 ... 92 7e-18
CP000959_777(CP000959|pid:none) Burkholderia cenocepacia MC0-3 c... 92 7e-18
CP000555_2959(CP000555|pid:none) Methylibium petroleiphilum PM1,... 92 7e-18
AL591985_26(AL591985|pid:none) Sinorhizobium meliloti 1021 plasm... 91 1e-17
CP000264_2566(CP000264|pid:none) Jannaschia sp. CCS1, complete g... 91 1e-17
CP000316_1750(CP000316|pid:none) Polaromonas sp. JS666, complete... 91 1e-17
AM236080_2450(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 91 2e-17
AE005673_2352(AE005673|pid:none) Caulobacter crescentus CB15, co... 90 2e-17
CP001340_2452(CP001340|pid:none) Caulobacter crescentus NA1000, ... 90 2e-17
CP000544_721(CP000544|pid:none) Halorhodospira halophila SL1, co... 90 3e-17
AM902716_2251(AM902716|pid:none) Bordetella petrii strain DSM 12... 90 3e-17
AM746676_4084(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 90 3e-17
BX640446_32(BX640446|pid:none) Bordetella bronchiseptica strain ... 89 4e-17
CP001287_1192(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 88 8e-17
BA000022_2760(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,... 88 1e-16
CP000388_3781(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 88 1e-16
CP000927_3614(CP000927|pid:none) Caulobacter sp. K31, complete g... 88 1e-16
DQ437970_1(DQ437970|pid:none) Cryptococcus neoformans var. grubi... 87 2e-16
BX640432_93(BX640432|pid:none) Bordetella parapertussis strain 1... 87 2e-16
BA000012_1234(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 86 3e-16
CP000951_2472(CP000951|pid:none) Synechococcus sp. PCC 7002, com... 86 3e-16
CP001101_1316(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 86 3e-16
AP009493_6121(AP009493|pid:none) Streptomyces griseus subsp. gri... 86 4e-16
DQ437973_1(DQ437973|pid:none) Cryptococcus neoformans var. grubi... 86 4e-16
CP000512_3237(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 86 4e-16
CP001193_183(CP001193|pid:none) Rhizobium leguminosarum bv. trif... 85 9e-16
CP000137_300(CP000137|pid:none) Rhizobium etli CFN 42 plasmid p4... 85 9e-16
AB2427(AB2427) hypothetical protein all4970 [imported] - Nostoc ... 84 2e-15
CP001037_5982(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 84 2e-15
CP000390_2008(CP000390|pid:none) Mesorhizobium sp. BNC1, complet... 83 3e-15
CP000828_3734(CP000828|pid:none) Acaryochloris marina MBIC11017,... 82 4e-15
AP009552_879(AP009552|pid:none) Microcystis aeruginosa NIES-843 ... 81 1e-14
CP000157_1852(CP000157|pid:none) Erythrobacter litoralis HTCC259... 81 1e-14
CP000613_610(CP000613|pid:none) Rhodospirillum centenum SW, comp... 81 1e-14
BA000039_2170(BA000039|pid:none) Thermosynechococcus elongatus B... 81 1e-14
AP008231_1715(AP008231|pid:none) Synechococcus elongatus PCC 630... 79 4e-14
CP000471_1493(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 79 5e-14
AE010299_2239(AE010299|pid:none) Methanosarcina acetivorans str.... 77 2e-13
BX294147_33(BX294147|pid:none) Rhodopirellula baltica SH 1 compl... 70 2e-11
CP000099_3229(CP000099|pid:none) Methanosarcina barkeri str. Fus... 69 4e-11
CP000097_1348(CP000097|pid:none) Synechococcus sp. CC9902, compl... 60 2e-08
CP000554_1997(CP000554|pid:none) Prochlorococcus marinus str. MI... 60 3e-08
CP000804_4303(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 59 7e-08
AP010904_2821(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 58 1e-07
AY596296_146(AY596296|pid:none) Haloarcula marismortui ATCC 4304... 57 3e-07
CP000577_2275(CP000577|pid:none) Rhodobacter sphaeroides ATCC 17... 55 1e-06
CP000143_2246(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 c... 55 1e-06
CP001150_1996(CP001150|pid:none) Rhodobacter sphaeroides KD131 c... 55 1e-06
CP001230_1442(CP001230|pid:none) Persephonella marina EX-H1, com... 54 2e-06
CP000637_191(CP000637|pid:none) Agrobacterium vitis S4 plasmid p... 53 3e-06
CP000110_1566(CP000110|pid:none) Synechococcus sp. CC9605, compl... 53 4e-06
CP000820_972(CP000820|pid:none) Frankia sp. EAN1pec, complete ge... 52 5e-06
CP000636_92(CP000636|pid:none) Agrobacterium vitis S4 plasmid pA... 52 5e-06
CP000686_4220(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 52 6e-06
CP000386_2357(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 52 6e-06
CP000142_3311(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 51 1e-05
CT978603_1836(CT978603|pid:none) Synechococcus sp. RCC307 genomi... 50 2e-05
CP001337_2996(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 50 2e-05
CP000239_1701(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, com... 50 2e-05
CP001349_2996(CP001349|pid:none) Methylobacterium nodulans ORS 2... 50 3e-05
A70362(A70362) N-methylhydantoinase A - Aquifex aeolicus &AE000... 50 3e-05
CP000804_3404(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 50 3e-05
CP000909_2215(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 49 4e-05
CP000360_2035(CP000360|pid:none) Acidobacteria bacterium Ellin34... 49 4e-05
CP000250_4402(CP000250|pid:none) Rhodopseudomonas palustris HaA2... 48 9e-05
CP000943_1857(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 48 1e-04
BA000012_3683(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 48 1e-04
CP001276_514(CP001276|pid:none) Thermomicrobium roseum DSM 5159 ... 48 1e-04
AB078814_1(AB078814|pid:none) Aspergillus oryzae NMH gene for hy... 47 2e-04
CP000240_2174(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-1... 47 2e-04
CP001336_2690(CP001336|pid:none) Desulfitobacterium hafniense DC... 47 2e-04
AM920429_50(AM920429|pid:none) Penicillium chrysogenum Wisconsin... 47 2e-04
CP000852_1364(CP000852|pid:none) Caldivirga maquilingensis IC-16... 47 2e-04
(Q58374) RecName: Full=Uncharacterized protein MJ0964; &D64420(... 47 2e-04
CP000813_311(CP000813|pid:none) Bacillus pumilus SAFR-032, compl... 47 3e-04
CP000454_3615(CP000454|pid:none) Arthrobacter sp. FB24, complete... 47 3e-04
CP000509_75(CP000509|pid:none) Nocardioides sp. JS614, complete ... 47 3e-04
CP000031_1440(CP000031|pid:none) Ruegeria pomeroyi DSS-3, comple... 46 4e-04
BA000040_7180(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 46 5e-04
AE017261_462(AE017261|pid:none) Picrophilus torridus DSM 9790, c... 46 5e-04
CS354251_4(CS354251|pid:none) Sequence 113 from Patent WO2006024... 45 6e-04
CR936258_105(CR936258|pid:none) Natronomonas pharaonis DSM 2160 ... 45 0.001
AP002086_32(AP002086|pid:none) Agrobacterium rhizogenes plasmid ... 44 0.001
AY466441_16(AY466441|pid:none) Saccharopolyspora spinosa NRLL 18... 44 0.002
AM286690_2584(AM286690|pid:none) Alcanivorax borkumensis SK2, co... 44 0.002
AE017333_1884(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 44 0.002
AM889285_198(AM889285|pid:none) Gluconacetobacter diazotrophicus... 44 0.002
CP000002_1879(CP000002|pid:none) Bacillus licheniformis ATCC 145... 44 0.002
(Q01262) RecName: Full=Hydantoin utilization protein A; AltName:... 43 0.003
CP000077_355(CP000077|pid:none) Sulfolobus acidocaldarius DSM 63... 43 0.003
CP000272_1063(CP000272|pid:none) Burkholderia xenovorans LB400 c... 43 0.003
AM260480_2416(AM260480|pid:none) Ralstonia eutropha H16 chromoso... 43 0.004
CP000300_1823(CP000300|pid:none) Methanococcoides burtonii DSM 6... 42 0.005
AP009384_3039(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 42 0.005
CP000248_176(CP000248|pid:none) Novosphingobium aromaticivorans ... 42 0.005
DQ058764_56(DQ058764|pid:none) Agrobacterium tumefaciens Ti plas... 42 0.007
CP000300_823(CP000300|pid:none) Methanococcoides burtonii DSM 62... 42 0.007
CP000431_3454(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 42 0.009
CP000009_206(CP000009|pid:none) Gluconobacter oxydans 621H, comp... 42 0.009
CP001195_171(CP001195|pid:none) Rhizobium leguminosarum bv. trif... 42 0.009
CP000159_172(CP000159|pid:none) Salinibacter ruber DSM 13855, co... 42 0.009
AE017333_362(AE017333|pid:none) Bacillus licheniformis DSM 13, c... 41 0.011
CP000712_2222(CP000712|pid:none) Pseudomonas putida F1, complete... 41 0.011
CP001638_358(CP001638|pid:none) Geobacillus sp. WCH70, complete ... 41 0.015
CP001053_2465(CP001053|pid:none) Burkholderia phytofirmans PsJN ... 40 0.019
CP000099_2409(CP000099|pid:none) Methanosarcina barkeri str. Fus... 40 0.025
BX640447_323(BX640447|pid:none) Bordetella bronchiseptica strain... 40 0.025
CP000271_1883(CP000271|pid:none) Burkholderia xenovorans LB400 c... 40 0.025
CP000859_3155(CP000859|pid:none) Desulfococcus oleovorans Hxd3, ... 40 0.033
AP009384_1797(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 39 0.043
CP001350_184(CP001350|pid:none) Methylobacterium nodulans ORS 20... 39 0.043
CP000943_5353(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 39 0.043
CP000300_1035(CP000300|pid:none) Methanococcoides burtonii DSM 6... 39 0.056
CP001014_455(CP001014|pid:none) Thermoproteus neutrophilus V24St... 39 0.056
AE010299_843(AE010299|pid:none) Methanosarcina acetivorans str. ... 39 0.056
CP000926_2396(CP000926|pid:none) Pseudomonas putida GB-1, comple... 39 0.073
CP001077_816(CP001077|pid:none) Rhizobium etli CIAT 652 plasmid ... 39 0.073
CP000491_456(CP000491|pid:none) Paracoccus denitrificans PD1222 ... 38 0.096
CP000264_3765(CP000264|pid:none) Jannaschia sp. CCS1, complete g... 38 0.096
AM167904_3291(AM167904|pid:none) Bordetella avium 197N complete ... 38 0.096
AE010299_4447(AE010299|pid:none) Methanosarcina acetivorans str.... 38 0.12
CP001403_935(CP001403|pid:none) Sulfolobus islandicus Y.G.57.14,... 38 0.12
AE010299_4283(AE010299|pid:none) Methanosarcina acetivorans str.... 38 0.12
CP001404_1773(CP001404|pid:none) Sulfolobus islandicus Y.N.15.51... 38 0.12
CP000943_1816(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 37 0.21
BA000002_1643(BA000002|pid:none) Aeropyrum pernix K1 DNA, comple... 37 0.28
H72485(H72485)probable hydantoinase APE2528 - Aeropyrum pernix (... 37 0.28
CP000082_1449(CP000082|pid:none) Psychrobacter arcticus 273-4, c... 37 0.28
BX640437_314(BX640437|pid:none) Bordetella bronchiseptica strain... 37 0.28
BX640413_71(BX640413|pid:none) Bordetella pertussis strain Toham... 37 0.28
CP000490_1556(CP000490|pid:none) Paracoccus denitrificans PD1222... 37 0.28
CP000830_688(CP000830|pid:none) Dinoroseobacter shibae DFL 12, c... 37 0.28
BA000040_3621(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 36 0.36
CP000099_1041(CP000099|pid:none) Methanosarcina barkeri str. Fus... 36 0.36
CP001389_3360(CP001389|pid:none) Rhizobium sp. NGR234, complete ... 36 0.36
CP001077_618(CP001077|pid:none) Rhizobium etli CIAT 652 plasmid ... 36 0.47
CP000390_2619(CP000390|pid:none) Mesorhizobium sp. BNC1, complet... 36 0.47
CP000561_419(CP000561|pid:none) Pyrobaculum calidifontis JCM 115... 36 0.47
CP000490_1411(CP000490|pid:none) Paracoccus denitrificans PD1222... 35 0.62
CP000686_2030(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 35 0.62
CP000269_844(CP000269|pid:none) Janthinobacterium sp. Marseille,... 35 0.62
CP000804_1731(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 35 0.62
CP001636_633(CP001636|pid:none) Variovorax paradoxus S110 chromo... 35 0.62
CP000300_748(CP000300|pid:none) Methanococcoides burtonii DSM 62... 35 0.62
CP000760_112(CP000760|pid:none) Ochrobactrum anthropi ATCC 49188... 35 0.62
AE010299_4448(AE010299|pid:none) Methanosarcina acetivorans str.... 35 0.62
CP000781_1328(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 35 0.81
CP000509_1460(CP000509|pid:none) Nocardioides sp. JS614, complet... 35 0.81
AE008384_750(AE008384|pid:none) Methanosarcina mazei strain Goe1... 35 0.81
AE008384_1078(AE008384|pid:none) Methanosarcina mazei strain Goe... 35 1.1
CP000682_1112(CP000682|pid:none) Metallosphaera sedula DSM 5348,... 35 1.1
CP001601_636(CP001601|pid:none) Corynebacterium aurimucosum ATCC... 35 1.1
CP000390_397(CP000390|pid:none) Mesorhizobium sp. BNC1, complete... 35 1.1
AD3230(AD3230) hydantoin utilization protein hyuA [imported] - A... 35 1.1
AM167904_952(AM167904|pid:none) Bordetella avium 197N complete g... 34 1.4
CP001281_3298(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 34 1.4
BX640413_137(BX640413|pid:none) Bordetella pertussis strain Toha... 34 1.4
CP000629_410(CP000629|pid:none) Agrobacterium radiobacter K84 ch... 34 1.4
AE010299_4284(AE010299|pid:none) Methanosarcina acetivorans str.... 34 1.8
CP001401_2307(CP001401|pid:none) Sulfolobus islandicus M.16.27, ... 34 1.8
CP000377_2804(CP000377|pid:none) Silicibacter sp. TM1040, comple... 34 1.8
AM269988_6(AM269988|pid:none) Aspergillus niger contig An01c0420... 33 2.4
CP000962_1025(CP000962|pid:none) Clostridium botulinum A3 str. L... 33 2.4
CP000634_687(CP000634|pid:none) Agrobacterium vitis S4 chromosom... 33 2.4
AM269952_36(AM269952|pid:none) Aspergillus niger contig An01c005... 33 2.4
CP000975_588(CP000975|pid:none) Methylacidiphilum infernorum V4,... 33 2.4
CP000542_1486(CP000542|pid:none) Verminephrobacter eiseniae EF01... 33 2.4
CP000099_132(CP000099|pid:none) Methanosarcina barkeri str. Fusa... 33 2.4
CP001389_3336(CP001389|pid:none) Rhizobium sp. NGR234, complete ... 33 2.4
CP000089_1015(CP000089|pid:none) Dechloromonas aromatica RCB, co... 33 3.1
BA000012_4045(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 33 3.1
AL591688_61(AL591688|pid:none) Sinorhizobium meliloti 1021 compl... 33 3.1
CP000353_485(CP000353|pid:none) Ralstonia metallidurans CH34 meg... 33 3.1
CP001581_1018(CP001581|pid:none) Clostridium botulinum A2 str. K... 33 3.1
CR555306_2654(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 33 3.1
AP010904_4572(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 33 3.1
CP000362_3333(CP000362|pid:none) Roseobacter denitrificans OCh 1... 33 3.1
DQ372711_9(DQ372711|pid:none) Azoarcus communis strain MUL2G9 hy... 33 4.0
AF251789_1(AF251789|pid:none) Xanthobacter sp. Py2 acetone carbo... 33 4.0
CP000092_259(CP000092|pid:none) Ralstonia eutropha JMP134 megapl... 33 4.0
CP000739_141(CP000739|pid:none) Sinorhizobium medicae WSM419 pla... 33 4.0
AY055852_2(AY055852|pid:none) Xanthobacter sp. Py2 sigma-54 depe... 33 4.0
CP000699_4193(CP000699|pid:none) Sphingomonas wittichii RW1, com... 33 4.0
CR380951_82(CR380951|pid:none) Candida glabrata strain CBS138 ch... 33 4.0
AM260522_857(AM260522|pid:none) Helicobacter acinonychis str. Sh... 32 5.2
CP000738_3233(CP000738|pid:none) Sinorhizobium medicae WSM419, c... 32 5.2
BX640433_186(BX640433|pid:none) Bordetella parapertussis strain ... 32 5.2
CP000096_375(CP000096|pid:none) Pelodictyon luteolum DSM 273, co... 32 5.2
CP000477_1376(CP000477|pid:none) Methanosaeta thermophila PT, co... 32 6.8
CP001072_645(CP001072|pid:none) Helicobacter pylori Shi470, comp... 32 8.9
BA000002_882(BA000002|pid:none) Aeropyrum pernix K1 DNA, complet... 32 8.9
CP000697_2018(CP000697|pid:none) Acidiphilium cryptum JF-5, comp... 32 8.9
AE001439_629(AE001439|pid:none) Helicobacter pylori J99, complet... 32 8.9
CR855130_1(CR855130|pid:none) Oryza sativa genomic DNA, chromoso... 32 8.9
AE000511_686(AE000511|pid:none) Helicobacter pylori 26695, compl... 32 8.9
AL662983_10(AL662983|pid:none) Oryza sativa genomic DNA, chromos... 32 8.9
CP000249_2481(CP000249|pid:none) Frankia sp. CcI3, complete geno... 32 8.9
CP000241_681(CP000241|pid:none) Helicobacter pylori HPAG1, compl... 32 8.9
>(Q54NW6) RecName: Full=5-oxoprolinase; EC=3.5.2.9;
AltName: Full=5-oxo-L-prolinase; Short=5-OPase;
AltName: Full=Pyroglutamase;
Length = 1280
Score = 254 bits (650), Expect = 5e-67
Identities = 124/126 (98%), Positives = 125/126 (99%)
Frame = +1
Query: 10 LLAMIKAVPRGLTSCVDAYLTPLIELYIKNFTKGFDSNIGDVDISFMMSDGGLCPVDSFR 189
L+ MIKAVPRGLTSCVDAYLTPLIELYIKNFTKGFDSNIGDVDISFMMSDGGLCPVDSFR
Sbjct: 247 LMPMIKAVPRGLTSCVDAYLTPLIELYIKNFTKGFDSNIGDVDISFMMSDGGLCPVDSFR 306
Query: 190 GFRSILSGPAGGVVGYSKTTSTVIESHKNNNGNNEIKQQPIIGFDMGGTSTDVSRYNGTL 369
GFRSILSGPAGGVVGYSKTTSTVIESHKNNNGNNEIKQQPIIGFDMGGTSTDVSRYNGTL
Sbjct: 307 GFRSILSGPAGGVVGYSKTTSTVIESHKNNNGNNEIKQQPIIGFDMGGTSTDVSRYNGTL 366
Query: 370 DHVFET 387
DHVFET
Sbjct: 367 DHVFET 372
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 646,725,013
Number of extensions: 12706179
Number of successful extensions: 37636
Number of sequences better than 10.0: 255
Number of HSP's gapped: 37156
Number of HSP's successfully gapped: 256
Length of query: 133
Length of database: 1,051,180,864
Length adjustment: 98
Effective length of query: 35
Effective length of database: 733,998,082
Effective search space: 25689932870
Effective search space used: 25689932870
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 29 (15.8 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
1 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |