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Dicty_cDB
Contig List | Clone List | cDNA Library List
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U13726-1
Contig ID Contig-U13726-1
Contig update 2002.12.18
Contig sequence 
>Contig-U13726-1 (Contig-U13726-1Q) /CSM_Contig/Contig-U13726-1Q.Seq.d
ATATTTTTATCAATCAATTTATTTATTTCACTTTATTTGTACTTTTACTT
TTGTATTACAAAATGAGATTCATTTTAGTTTTAGTTTTAATTTTGGGCTT
AGTCTCATCATCATTTGGTATCAATGTTGACAAGAATGAAGTATCTCAAA
CCGAATTACAATCAGCTCGTGACTTTAGTTCATTCGCTATCGGCTTTGCA
GAGGGTATTGAAATTAGTTTGACTGGTAATCTTCATAAATGTGTTGCTGC
AGCCGAATCAAGTTTCAGTGAATTCTCAAATTCCTTCCATTTAATTGATA
GTGGTTTGAAACATAAATCATTAGGTGATGCAAAGAGTGGTCTCCGTGAT
TTTGGTATTGGTTTAGTTGATTTGGTCAAAACCTACCAAAGATGTGGTGT
TGGAAAATTCATTAGTGAAATCTCTGCCATTTCAAAAGAAGTTACCAACG
AAACTGGTATCATCAAACTCATTATTCATGAAGTCATCGATATTTTCCAC
AACTCCCACAGTTTAACTTCCGATTTCAAATCCGCCATTTCAGATTGTGG
TCGTGGTGATTACACTGGTTGTGGTGTTGCAAGTGGAAAAATTGTCGGAA
TTTTAATGAGACAATAAATTATCAATTCATCCCCTATCCCTTTCCAAAAA
GGGATCAGCTAAAAAAATTTTCTTTTAATTTTTTAGTTTTTGTATATTAA
ATAAAATTTTTTTTTTTTTTTATGAGACTCATAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA
Gap no gap
Contig length 762
Chromosome number (1..6, M) 6
Chromosome length 3595308
Start point 30756
End point 29994
Strand (PLUS/MINUS) MINUS
Number of clones 17
Number of EST 21
Link to clone list U13726
List of clone(s) 

est1=VHJ638E,1,653
est2=SSH470F,21,259
est3=SSI272E,21,676
est4=VSF110F,27,556
est5=VSF110Z,27,662
est6=VSH863E,29,659
est7=VSI479Z,30,623
est8=VSD240E,36,661
est9=VSI479F,36,620
est10=VSH158F,43,539
est11=VSI331E,43,628
est12=VSF681F,53,668
est13=VSF681Z,53,660
est14=VHL121Z,56,657
est15=VSI305E,62,660
est16=SSF481Z,71,680
est17=SSF889Z,110,763
est18=VSC734Z,137,694
est19=VSC808Z,137,708
est20=SSH470Z,309,708
est21=SSM789Z,315,662
Translated Amino Acid sequence 
IFINQFIYFTLFVLLLLYYKMRFILVLVLILGLVSSSFGINVDKNEVSQTELQSARDFSS
FAIGFAEGIEISLTGNLHKCVAAAESSFSEFSNSFHLIDSGLKHKSLGDAKSGLRDFGIG
LVDLVKTYQRCGVGKFISEISAISKEVTNETGIIKLIIHEVIDIFHNSHSLTSDFKSAIS
DCGRGDYTGCGVASGKIVGILMRQ*iinsspipfqkgis*knfllif*flyik*nffffl
*ds*kkkkkkkkk
Translated Amino Acid sequence (All Frames) 
Frame A:
iflsinlfislylyfyfcitk*dsf*f*f*fwa*shhhlvsmltrmkylkpnynqlvtlv
hslsalqrvlklv*lvifinvllqpnqvsvnsqipsi*livv*ninh*vmqrvvsvilvl
v*liwskptkdvvlenslvkslpfqkklptklvssnslfmkssifsttptv*lpisnppf
qivvvvitlvvvlqveklsef**dnklsihplslskkgsakkiff*ffsfcilnkiffff
yethkkkkkkkkkk


Frame B:
yfyqsiylfhfictftfvlqneihfsfsfnfglsliiiwyqc*qe*sisnritiss*l*f
iryrlcrgy*n*fdw*ss*mcccsrikfq*ilkflpfn**wfet*iir*ckewsp*fwyw
fs*fgqnlpkmwcwkih**nlchfkrsyqrnwyhqthys*shryfpqlpqfnfrfqirhf
rlwsw*lhwlwcckwkncrnfnetinyqfipypfpkrdqlkkfsfnflvfvy*ikfffff
mrlikkkkkkkkk


Frame C:
IFINQFIYFTLFVLLLLYYKMRFILVLVLILGLVSSSFGINVDKNEVSQTELQSARDFSS
FAIGFAEGIEISLTGNLHKCVAAAESSFSEFSNSFHLIDSGLKHKSLGDAKSGLRDFGIG
LVDLVKTYQRCGVGKFISEISAISKEVTNETGIIKLIIHEVIDIFHNSHSLTSDFKSAIS
DCGRGDYTGCGVASGKIVGILMRQ*iinsspipfqkgis*knfllif*flyik*nffffl
*ds*kkkkkkkkk
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U13726-1 (Contig-U13726-1Q)
/CSM_Contig/Contig-U13726-1Q.Seq.d
         (762 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U13726-1 (Contig-U13726-1Q) /CSM_Contig/Conti...  1193  0.0
Contig-U13549-1 (Contig-U13549-1Q) /CSM_Contig/Conti...   490  e-138
Contig-U04916-1 (Contig-U04916-1Q) /CSM_Contig/Conti...    36  0.053
Contig-U11432-1 (Contig-U11432-1Q) /CSM_Contig/Conti...    34  0.21
Contig-U11197-1 (Contig-U11197-1Q) /CSM_Contig/Conti...    34  0.21
Contig-U06046-1 (Contig-U06046-1Q) /CSM_Contig/Conti...    34  0.21
Contig-U05527-1 (Contig-U05527-1Q) /CSM_Contig/Conti...    34  0.21
Contig-U13951-1 (Contig-U13951-1Q) /CSM_Contig/Conti...    32  0.84
Contig-U06916-1 (Contig-U06916-1Q) /CSM_Contig/Conti...    30  3.3

>Contig-U13726-1 (Contig-U13726-1Q) /CSM_Contig/Contig-U13726-1Q.Seq.d
          Length = 762

 Score = 1193 bits (602), Expect = 0.0
 Identities = 602/602 (100%)
 Strand = Plus / Plus

                                                                       
Query: 59  caaaatgagattcattttagttttagttttaattttgggcttagtctcatcatcatttgg 118
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59  caaaatgagattcattttagttttagttttaattttgggcttagtctcatcatcatttgg 118

                                                                       
Query: 119 tatcaatgttgacaagaatgaagtatctcaaaccgaattacaatcagctcgtgactttag 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 tatcaatgttgacaagaatgaagtatctcaaaccgaattacaatcagctcgtgactttag 178

                                                                       
Query: 179 ttcattcgctatcggctttgcagagggtattgaaattagtttgactggtaatcttcataa 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ttcattcgctatcggctttgcagagggtattgaaattagtttgactggtaatcttcataa 238

                                                                       
Query: 239 atgtgttgctgcagccgaatcaagtttcagtgaattctcaaattccttccatttaattga 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 atgtgttgctgcagccgaatcaagtttcagtgaattctcaaattccttccatttaattga 298

                                                                       
Query: 299 tagtggtttgaaacataaatcattaggtgatgcaaagagtggtctccgtgattttggtat 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tagtggtttgaaacataaatcattaggtgatgcaaagagtggtctccgtgattttggtat 358

                                                                       
Query: 359 tggtttagttgatttggtcaaaacctaccaaagatgtggtgttggaaaattcattagtga 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tggtttagttgatttggtcaaaacctaccaaagatgtggtgttggaaaattcattagtga 418

                                                                       
Query: 419 aatctctgccatttcaaaagaagttaccaacgaaactggtatcatcaaactcattattca 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 aatctctgccatttcaaaagaagttaccaacgaaactggtatcatcaaactcattattca 478

                                                                       
Query: 479 tgaagtcatcgatattttccacaactcccacagtttaacttccgatttcaaatccgccat 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tgaagtcatcgatattttccacaactcccacagtttaacttccgatttcaaatccgccat 538

                                                                       
Query: 539 ttcagattgtggtcgtggtgattacactggttgtggtgttgcaagtggaaaaattgtcgg 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ttcagattgtggtcgtggtgattacactggttgtggtgttgcaagtggaaaaattgtcgg 598

                                                                       
Query: 599 aattttaatgagacaataaattatcaattcatcccctatccctttccaaaaagggatcag 658
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 aattttaatgagacaataaattatcaattcatcccctatccctttccaaaaagggatcag 658

             
Query: 659 ct 660
           ||
Sbjct: 659 ct 660


 Score = 30.2 bits (15), Expect = 3.3
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 692 gtatattaaataaaa 706
           |||||||||||||||
Sbjct: 692 gtatattaaataaaa 706


>Contig-U13549-1 (Contig-U13549-1Q) /CSM_Contig/Contig-U13549-1Q.Seq.d
          Length = 591

 Score =  490 bits (247), Expect = e-138
 Identities = 247/247 (100%)
 Strand = Plus / Plus

                                                                       
Query: 59  caaaatgagattcattttagttttagttttaattttgggcttagtctcatcatcatttgg 118
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50  caaaatgagattcattttagttttagttttaattttgggcttagtctcatcatcatttgg 109

                                                                       
Query: 119 tatcaatgttgacaagaatgaagtatctcaaaccgaattacaatcagctcgtgactttag 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 tatcaatgttgacaagaatgaagtatctcaaaccgaattacaatcagctcgtgactttag 169

                                                                       
Query: 179 ttcattcgctatcggctttgcagagggtattgaaattagtttgactggtaatcttcataa 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 ttcattcgctatcggctttgcagagggtattgaaattagtttgactggtaatcttcataa 229

                                                                       
Query: 239 atgtgttgctgcagccgaatcaagtttcagtgaattctcaaattccttccatttaattga 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 atgtgttgctgcagccgaatcaagtttcagtgaattctcaaattccttccatttaattga 289

                  
Query: 299 tagtggt 305
           |||||||
Sbjct: 290 tagtggt 296


>Contig-U04916-1 (Contig-U04916-1Q) /CSM_Contig/Contig-U04916-1Q.Seq.d
          Length = 586

 Score = 36.2 bits (18), Expect = 0.053
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 73  ttttagttttagttttaa 90
           ||||||||||||||||||
Sbjct: 477 ttttagttttagttttaa 460


 Score = 30.2 bits (15), Expect = 3.3
 Identities = 21/23 (91%)
 Strand = Plus / Minus

                                  
Query: 72  attttagttttagttttaatttt 94
           |||||| ||||||||||| ||||
Sbjct: 484 attttatttttagttttagtttt 462


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6887
Number of Sequences: 6905
Number of extensions: 6887
Number of successful extensions: 606
Number of sequences better than 10.0: 70
length of query: 762
length of database: 5,674,871
effective HSP length: 16
effective length of query: 746
effective length of database: 5,564,391
effective search space: 4151035686
effective search space used: 4151035686
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.12.13
Homology vs DNA 
Query= Contig-U13726-1 (Contig-U13726-1Q) /CSM_Contig/Contig-U13726-1Q.Seq.d
         (762 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU265612) Dictyostelium discoideum vegetative cDNA clone:VS...  1120   0.0    1
(C93019) Dictyostelium discoideum slug cDNA, clone SSF481.       1120   0.0    1
(C90651) Dictyostelium discoideum slug cDNA, clone SSI272.       1120   0.0    1
(AU265613) Dictyostelium discoideum vegetative cDNA clone:VS...  1094   0.0    1
(AU263701) Dictyostelium discoideum vegetative cDNA clone:VS...  1086   0.0    1
(AU268479) Dictyostelium discoideum vegetative cDNA clone:VS...  1072   0.0    1
(C92711) Dictyostelium discoideum slug cDNA, clone SSF889.       1066   0.0    1
(AU262758) Dictyostelium discoideum vegetative cDNA clone:VS...  1035   0.0    1
(AU268761) Dictyostelium discoideum vegetative cDNA clone:VS...  1033   0.0    1
(AU262804) Dictyostelium discoideum vegetative cDNA clone:VS...  1029   0.0    1
(AU268760) Dictyostelium discoideum vegetative cDNA clone:VS...  1027   0.0    1
(BJ442597) Dictyostelium discoideum cDNA clone:ddv50k10, 3' ...   961   0.0    2
(AU264723) Dictyostelium discoideum vegetative cDNA clone:VS...   852   0.0    3
(BJ423780) Dictyostelium discoideum cDNA clone:ddv50k10, 5' ...  1015   0.0    1
(AU268091) Dictyostelium discoideum vegetative cDNA clone:VS...   981   0.0    1
(BJ443498) Dictyostelium discoideum cDNA clone:ddv53i05, 3' ...   807   0.0    5
(AU268521) Dictyostelium discoideum vegetative cDNA clone:VS...   926   0.0    1
(AU263700) Dictyostelium discoideum vegetative cDNA clone:VS...   920   0.0    1
(AU268522) Dictyostelium discoideum vegetative cDNA clone:VS...   716   0.0    3
(AU268478) Dictyostelium discoideum vegetative cDNA clone:VS...   908   0.0    1
(AU264722) Dictyostelium discoideum vegetative cDNA clone:VS...   902   0.0    1
(AU268090) Dictyostelium discoideum vegetative cDNA clone:VS...   898   0.0    1
(AU266993) Dictyostelium discoideum vegetative cDNA clone:VS...   837   0.0    2
(AU038250) Dictyostelium discoideum slug cDNA, clone SSH470.      698   0.0    1
(C93396) Dictyostelium discoideum slug cDNA, clone SSM789.        686   0.0    1
(BJ418776) Dictyostelium discoideum cDNA clone:ddv33o24, 5' ...   418   e-112  1
(AU073531) Dictyostelium discoideum slug cDNA, clone SSH470.      319   9e-83  1
(M16346) D.discoideum protein 29C gene, 5' end.                   252   6e-69  2
(AC189615) Brassica rapa subsp. pekinensis clone KBrH098A19,...    36   0.18   4
(AC103127) Rattus norvegicus clone CH230-216M20, WORKING DRA...    36   2.7    5
(BZ219166) CH230-259F7.TJ CHORI-230 Segment 2 Rattus norvegi...    40   4.8    2
(DU073843) 68739 Tomato HindIII BAC Library Solanum lycopers...    44   7.6    1
(AG312004) Mus musculus molossinus DNA, clone:MSMg01-094P15....    44   7.6    1
(CP000117) Anabaena variabilis ATCC 29413, complete genome.        44   7.6    1
(AY768465) Anabaena variabilis ATCC 29413 phycocyanin B subu...    44   7.6    1

>(AU265612) Dictyostelium discoideum vegetative cDNA clone:VSF681,
           5' end single read.
          Length = 610

 Score = 1120 bits (565), Expect = 0.0
 Identities = 565/565 (100%)
 Strand = Plus / Plus


Query: 95  gggcttagtctcatcatcatttggtatcaatgttgacaagaatgaagtatctcaaaccga 154
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45  gggcttagtctcatcatcatttggtatcaatgttgacaagaatgaagtatctcaaaccga 104


Query: 155 attacaatcagctcgtgactttagttcattcgctatcggctttgcagagggtattgaaat 214
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 attacaatcagctcgtgactttagttcattcgctatcggctttgcagagggtattgaaat 164


Query: 215 tagtttgactggtaatcttcataaatgtgttgctgcagccgaatcaagtttcagtgaatt 274
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 tagtttgactggtaatcttcataaatgtgttgctgcagccgaatcaagtttcagtgaatt 224


Query: 275 ctcaaattccttccatttaattgatagtggtttgaaacataaatcattaggtgatgcaaa 334
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 ctcaaattccttccatttaattgatagtggtttgaaacataaatcattaggtgatgcaaa 284


Query: 335 gagtggtctccgtgattttggtattggtttagttgatttggtcaaaacctaccaaagatg 394
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 gagtggtctccgtgattttggtattggtttagttgatttggtcaaaacctaccaaagatg 344


Query: 395 tggtgttggaaaattcattagtgaaatctctgccatttcaaaagaagttaccaacgaaac 454
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tggtgttggaaaattcattagtgaaatctctgccatttcaaaagaagttaccaacgaaac 404


Query: 455 tggtatcatcaaactcattattcatgaagtcatcgatattttccacaactcccacagttt 514
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tggtatcatcaaactcattattcatgaagtcatcgatattttccacaactcccacagttt 464


Query: 515 aacttccgatttcaaatccgccatttcagattgtggtcgtggtgattacactggttgtgg 574
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 aacttccgatttcaaatccgccatttcagattgtggtcgtggtgattacactggttgtgg 524


Query: 575 tgttgcaagtggaaaaattgtcggaattttaatgagacaataaattatcaattcatcccc 634
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tgttgcaagtggaaaaattgtcggaattttaatgagacaataaattatcaattcatcccc 584


Query: 635 tatccctttccaaaaagggatcagc 659
           |||||||||||||||||||||||||
Sbjct: 585 tatccctttccaaaaagggatcagc 609

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 614,290,426
Number of extensions: 33142041
Number of successful extensions: 2373234
Number of sequences better than 10.0: 35
Length of query: 762
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 738
Effective length of database: 97,308,875,965
Effective search space: 71813950462170
Effective search space used: 71813950462170
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7. 8
Homology vs Protein 
Query= Contig-U13726-1 (Contig-U13726-1Q) /CSM_Contig/Contig-U13726-1Q.Seq.d
         (762 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q23911) RecName: Full=Protein 29C; Flags: Precursor;                 293   4e-78
(O77257) RecName: Full=Protein gp17; Flags: Precursor;  &Y17042_...   107   5e-22
(Q54KD5) RecName: Full=P17/29C-like protein DDB_G0287399; Flags:...    94   5e-18
M16346_1(M16346|pid:none) D.discoideum protein 29C gene, 5' end.       76   1e-12
(O42643) RecName: Full=Pre-mRNA-splicing factor ATP-dependent RN...    33   9.8

>(Q23911) RecName: Full=Protein 29C; Flags: Precursor;
          Length = 184

 Score =  293 bits (750), Expect = 4e-78
 Identities = 150/164 (91%), Positives = 150/164 (91%)
 Frame = +3

Query: 123 NVDKNEVSQTELQSARDFSSFAIGFAEGIEISLTGNLHKCVXXXXXXXXXXXXXXHLIDS 302
           NVDKNEVSQTELQSARDFSSFAIGFAEGIEISLTGNLHKCV              HLIDS
Sbjct: 21  NVDKNEVSQTELQSARDFSSFAIGFAEGIEISLTGNLHKCVAAAESSFSEFSNSFHLIDS 80

Query: 303 GLKHKSLGDAKSGLRDFGIGLVDLVKTYQRCGVGKFISEISAISKEVTNETGIIKLIIHE 482
           GLKHKSLGDAKSGLRDFGIGLVDLVKTYQRCGVGKFISEISAISKEVTNETGIIKLIIHE
Sbjct: 81  GLKHKSLGDAKSGLRDFGIGLVDLVKTYQRCGVGKFISEISAISKEVTNETGIIKLIIHE 140

Query: 483 VIDIFHNSHSLTSDFKSAISDCGRGDYTGCGVASGKIVGILMRQ 614
           VIDIFHNSHSLTSDFKSAISDCGRGDYTGCGVASGKIVGILMRQ
Sbjct: 141 VIDIFHNSHSLTSDFKSAISDCGRGDYTGCGVASGKIVGILMRQ 184

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 997,772,545
Number of extensions: 17718061
Number of successful extensions: 52628
Number of sequences better than 10.0: 5
Number of HSP's gapped: 52558
Number of HSP's successfully gapped: 5
Length of query: 254
Length of database: 1,051,180,864
Length adjustment: 126
Effective length of query: 128
Effective length of database: 643,374,430
Effective search space: 82351927040
Effective search space used: 82351927040
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
PSORT 

 psg: 0.99  gvh: 0.89  alm: 0.43  top: 0.60  tms: 0.00  mit: 0.35  mip: 0.10
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: extracellular, including cell wall
	 20.0 %: mitochondrial
	 12.0 %: cytoplasmic
	  8.0 %: vacuolar
	  4.0 %: Golgi
	  4.0 %: plasma membrane
	  4.0 %: endoplasmic reticulum

>> prediction for Contig-U13726-1 is exc
VS (DIR, S) 10
VH (FL, L) 2
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 5
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0