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Dicty_cDB
Contig List | Clone List | cDNA Library List
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U13715-1
Contig ID Contig-U13715-1
Contig update 2002.12.18
Contig sequence 
>Contig-U13715-1 (Contig-U13715-1Q) /CSM_Contig/Contig-U13715-1Q.Seq.d
NNNNNNNNNNGCGTGATATGAGTTATGTTTATGGTATTTTCACTCAAGCT
GCTGCATCTGGTTTAATTATTGGTTTTACTTTTTGGAATTTAGATTTATC
ATCTTCAGATATGAATCAACGTGTATTTTTCATATTTGAAATTCTTTTCT
TGGGTATTCTCTACATCTTTATTGCAATTCCTCAATTTTTAATTCAAAAA
GCTTACTTTAAGAAAGATTATGCCTCTAAATTTTATTCTTGGTGTCCATT
TGCCATTTCAATTGTCATTGTTGAATTACCTTTTGTTGCAGTCGCTGGAA
CAATTTGTTTCTTTTGTTCTTTTTGGACAGCAGGTATTTATTACAATGGT
GAATATGATTTTTATTTTTATATAACTTTCATCCTCTTCCTTTTCATTTG
TGTTTCACTTGGTCAAGTTGTATCTGCCTTTTGTTTCAATGTTATGTTGT
AACATCAGTTTTAAAGAATGTTTTTGTTGATTGTTCAAATGAAGATTTAA
CCAAATTCTCAAACCCAACAAATTTAACCTGTAAAGAATATTTCAAGCCA
ACCTATGGAAATGTTCGTGCTGTTACCAAAGGCGATGAAAGTGAATGTGG
TTATTGTGTTTTTAAATCAGGTGAAGAATATTATAAAACTCTTGGTTGGT
CTTATGAAAACCGTTTAAGAAACTATGGTATTTTATGGGCTTTCTTTATT
TTCAACATAATT
Gap no gap
Contig length 712
Chromosome number (1..6, M) 6
Chromosome length 3595308
Start point 2286627
End point 2287329
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U13715
List of clone(s) 

est1=VHK239Z,1,703
Translated Amino Acid sequence 
XXXRDMSYVYGIFTQAAASGLIIGFTFWNLDLSSSDMNQRVFFIFEILFLGILYIFIAIP
QFLIQKAYFKKDYASKFYSWCPFAISIVIVELPFVAVAGTICFFCSFWTAGIYYNGEYDF
YFYITFILFLFICVSLGQVVSAFCFNVML*hqf*rmfllivqmki*pnsqtqqi*pvkni
ssqpmemfvllpkamkvnvvivflnqvkniikllvglmktv*etmvfyglslfst*
Translated Amino Acid sequence (All Frames) 
Frame A:
xxxxvi*vmfmvfslkllhlv*llvllfgi*iyhlqi*invyfsylkffswvfstsllqf
lnf*fkkltlrkimplnfilgvhlpfqlsllnylllqsleqfvsfvlfgqqvfitmvnmi
fifi*lssssfsfvfhlvklylpfvsmlccnisfkecfc*lfk*rfnqilkpnkfnl*ri
fqanlwkcsccyqrr*k*mwllcf*ir*ril*nswlvl*kpfkklwyfmgflyfqhn


Frame B:
xxxa*yelclwyfhsscciwfnywfyflefrfiifryestcifhi*nsflgyslhlycns
sifnsksll*erlcl*ilflvsichfnchc*itfccsrwnnlfllffldsryllqw*i*f
lflynfhplpfhlcftwsscicllfqcyvvtsvlknvfvdcsnedltkfsnptnltckey
fkptygnvravtkgdesecgycvfksgeeyyktlgwsyenrlrnygilwaffifnii


Frame C:
XXXRDMSYVYGIFTQAAASGLIIGFTFWNLDLSSSDMNQRVFFIFEILFLGILYIFIAIP
QFLIQKAYFKKDYASKFYSWCPFAISIVIVELPFVAVAGTICFFCSFWTAGIYYNGEYDF
YFYITFILFLFICVSLGQVVSAFCFNVML*hqf*rmfllivqmki*pnsqtqqi*pvkni
ssqpmemfvllpkamkvnvvivflnqvkniikllvglmktv*etmvfyglslfst*
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U13715-1 (Contig-U13715-1Q)
/CSM_Contig/Contig-U13715-1Q.Seq.d
         (712 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U13715-1 (Contig-U13715-1Q) /CSM_Contig/Conti...  1392  0.0
Contig-U12118-1 (Contig-U12118-1Q) /CSM_Contig/Conti...   856  0.0
Contig-U11940-1 (Contig-U11940-1Q) /CSM_Contig/Conti...    58  1e-08
Contig-U14568-1 (Contig-U14568-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U10768-1 (Contig-U10768-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U04598-1 (Contig-U04598-1Q) /CSM_Contig/Conti...    38  0.013
Contig-U11525-1 (Contig-U11525-1Q) /CSM_Contig/Conti...    36  0.050
Contig-U09718-1 (Contig-U09718-1Q) /CSM_Contig/Conti...    36  0.050
Contig-U01788-1 (Contig-U01788-1Q) /CSM_Contig/Conti...    36  0.050
Contig-U14661-1 (Contig-U14661-1Q) /CSM_Contig/Conti...    34  0.20

>Contig-U13715-1 (Contig-U13715-1Q) /CSM_Contig/Contig-U13715-1Q.Seq.d
          Length = 712

 Score = 1392 bits (702), Expect = 0.0
 Identities = 702/702 (100%)
 Strand = Plus / Plus

                                                                       
Query: 11  gcgtgatatgagttatgtttatggtattttcactcaagctgctgcatctggtttaattat 70
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11  gcgtgatatgagttatgtttatggtattttcactcaagctgctgcatctggtttaattat 70

                                                                       
Query: 71  tggttttactttttggaatttagatttatcatcttcagatatgaatcaacgtgtattttt 130
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71  tggttttactttttggaatttagatttatcatcttcagatatgaatcaacgtgtattttt 130

                                                                       
Query: 131 catatttgaaattcttttcttgggtattctctacatctttattgcaattcctcaattttt 190
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 catatttgaaattcttttcttgggtattctctacatctttattgcaattcctcaattttt 190

                                                                       
Query: 191 aattcaaaaagcttactttaagaaagattatgcctctaaattttattcttggtgtccatt 250
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aattcaaaaagcttactttaagaaagattatgcctctaaattttattcttggtgtccatt 250

                                                                       
Query: 251 tgccatttcaattgtcattgttgaattaccttttgttgcagtcgctggaacaatttgttt 310
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tgccatttcaattgtcattgttgaattaccttttgttgcagtcgctggaacaatttgttt 310

                                                                       
Query: 311 cttttgttctttttggacagcaggtatttattacaatggtgaatatgatttttattttta 370
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cttttgttctttttggacagcaggtatttattacaatggtgaatatgatttttattttta 370

                                                                       
Query: 371 tataactttcatcctcttccttttcatttgtgtttcacttggtcaagttgtatctgcctt 430
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tataactttcatcctcttccttttcatttgtgtttcacttggtcaagttgtatctgcctt 430

                                                                       
Query: 431 ttgtttcaatgttatgttgtaacatcagttttaaagaatgtttttgttgattgttcaaat 490
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ttgtttcaatgttatgttgtaacatcagttttaaagaatgtttttgttgattgttcaaat 490

                                                                       
Query: 491 gaagatttaaccaaattctcaaacccaacaaatttaacctgtaaagaatatttcaagcca 550
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gaagatttaaccaaattctcaaacccaacaaatttaacctgtaaagaatatttcaagcca 550

                                                                       
Query: 551 acctatggaaatgttcgtgctgttaccaaaggcgatgaaagtgaatgtggttattgtgtt 610
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 acctatggaaatgttcgtgctgttaccaaaggcgatgaaagtgaatgtggttattgtgtt 610

                                                                       
Query: 611 tttaaatcaggtgaagaatattataaaactcttggttggtcttatgaaaaccgtttaaga 670
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tttaaatcaggtgaagaatattataaaactcttggttggtcttatgaaaaccgtttaaga 670

                                                     
Query: 671 aactatggtattttatgggctttctttattttcaacataatt 712
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 aactatggtattttatgggctttctttattttcaacataatt 712


>Contig-U12118-1 (Contig-U12118-1Q) /CSM_Contig/Contig-U12118-1Q.Seq.d
          Length = 2905

 Score =  856 bits (432), Expect = 0.0
 Identities = 439/440 (99%), Gaps = 1/440 (0%)
 Strand = Plus / Plus

                                                                        
Query: 11   gcgtgatatgagttatgtttatggtattttcactcaagctgctgcatctggtttaattat 70
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1993 gcgtgatatgagttatgtttatggtattttcactcaagctgctgcatctggtttaattat 2052

                                                                        
Query: 71   tggttttactttttggaa-tttagatttatcatcttcagatatgaatcaacgtgtatttt 129
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2053 tggttttactttttggaaatttagatttatcatcttcagatatgaatcaacgtgtatttt 2112

                                                                        
Query: 130  tcatatttgaaattcttttcttgggtattctctacatctttattgcaattcctcaatttt 189
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2113 tcatatttgaaattcttttcttgggtattctctacatctttattgcaattcctcaatttt 2172

                                                                        
Query: 190  taattcaaaaagcttactttaagaaagattatgcctctaaattttattcttggtgtccat 249
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2173 taattcaaaaagcttactttaagaaagattatgcctctaaattttattcttggtgtccat 2232

                                                                        
Query: 250  ttgccatttcaattgtcattgttgaattaccttttgttgcagtcgctggaacaatttgtt 309
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2233 ttgccatttcaattgtcattgttgaattaccttttgttgcagtcgctggaacaatttgtt 2292

                                                                        
Query: 310  tcttttgttctttttggacagcaggtatttattacaatggtgaatatgatttttattttt 369
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2293 tcttttgttctttttggacagcaggtatttattacaatggtgaatatgatttttattttt 2352

                                                                        
Query: 370  atataactttcatcctcttccttttcatttgtgtttcacttggtcaagttgtatctgcct 429
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2353 atataactttcatcctcttccttttcatttgtgtttcacttggtcaagttgtatctgcct 2412

                                
Query: 430  tttgtttcaatgttatgttg 449
            ||||||||||||||||||||
Sbjct: 2413 tttgtttcaatgttatgttg 2432


 Score =  517 bits (261), Expect = e-147
 Identities = 268/269 (99%), Gaps = 1/269 (0%)
 Strand = Plus / Plus

                                                                        
Query: 445  tgttgtaacatcagttttaaagaatgtttttgttgattgttcaaatgaagatttaaccaa 504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2564 tgttgtaacatcagttttaaagaatgtttttgttgattgttcaaatgaagatttaaccaa 2623

                                                                        
Query: 505  attctcaaacccaacaaatttaacctgtaaagaatatttcaagccaacctatggaaatgt 564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2624 attctcaaacccaacaaatttaacctgtaaagaatatttcaagccaacctatggaaatgt 2683

                                                                        
Query: 565  tcgtgctgttaccaaaggcgatgaaagtgaatgtggttattgtgtttttaaatcaggtga 624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2684 tcgtgctgttaccaaaggcgatgaaagtgaatgtggttattgtgtttttaaatcaggtga 2743

                                                                        
Query: 625  agaatattataaaactcttggttggtcttatgaaaaccgtttaagaaactatggtatttt 684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2744 agaatattataaaactcttggttggtcttatgaaaaccgtttaagaaactatggtatttt 2803

                                         
Query: 685  atgggcttt-ctttattttcaacataatt 712
            ||||||||| |||||||||||||||||||
Sbjct: 2804 atgggctttgctttattttcaacataatt 2832


>Contig-U11940-1 (Contig-U11940-1Q) /CSM_Contig/Contig-U11940-1Q.Seq.d
          Length = 1870

 Score = 58.0 bits (29), Expect = 1e-08
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                        
Query: 204  tactttaagaaagattatgcctctaaattttattcttggtgtccatttgccatttcaatt 263
            |||||||||| ||||| ||||  |||||| ||||| ||||  |||||||| |||||||||
Sbjct: 1153 tactttaagagagattttgccagtaaattctattcatggttcccatttgcaatttcaatt 1212

                             
Query: 264  gtcattgttgaattacc 280
            ||  |||| ||||||||
Sbjct: 1213 gttgttgtagaattacc 1229


 Score = 42.1 bits (21), Expect = 8e-04
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                     
Query: 595  atgtggttattgtgtttttaaatcaggtgaagaatattataaaactcttggttggtc 651
            ||||||||||||| | | ||||   ||||||||||||||  |||| |||||||||||
Sbjct: 1707 atgtggttattgtatctataaaaatggtgaagaatattacgaaacacttggttggtc 1763


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,096
Number of Sequences: 6905
Number of extensions: 16096
Number of successful extensions: 2312
Number of sequences better than 10.0: 205
length of query: 712
length of database: 5,674,871
effective HSP length: 16
effective length of query: 696
effective length of database: 5,564,391
effective search space: 3872816136
effective search space used: 3872816136
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.12.13
Homology vs DNA 
Query= Contig-U13715-1 (Contig-U13715-1Q) /CSM_Contig/Contig-U13715-1Q.Seq.d
         (712 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ442944) Dictyostelium discoideum cDNA clone:ddv51m10, 3' ...  1390   0.0    1
(AF482389) Dictyostelium discoideum ABC transporter AbcG10 (...   868   0.0    2
(BJ400847) Dictyostelium discoideum cDNA clone:dds15g05, 3' ...   801   0.0    2
(BJ443330) Dictyostelium discoideum cDNA clone:ddv52h18, 3' ...   735   0.0    2
(BJ444945) Dictyostelium discoideum cDNA clone:ddv57o23, 3' ...   724   0.0    3
(BJ408841) Dictyostelium discoideum cDNA clone:dds47k03, 3' ...   720   0.0    3
(BJ445610) Dictyostelium discoideum cDNA clone:ddv60e03, 3' ...   718   0.0    2
(BJ442945) Dictyostelium discoideum cDNA clone:ddv51m12, 3' ...   716   0.0    2
(BJ438352) Dictyostelium discoideum cDNA clone:ddv37m14, 3' ...   692   0.0    2
(BJ437086) Dictyostelium discoideum cDNA clone:ddv33l02, 3' ...   692   0.0    2
(BJ407769) Dictyostelium discoideum cDNA clone:dds43h14, 3' ...   690   0.0    2
(BJ438191) Dictyostelium discoideum cDNA clone:ddv36l14, 3' ...   686   0.0    3
(BJ378990) Dictyostelium discoideum cDNA clone:ddc33o10, 3' ...   678   0.0    2
(BJ445904) Dictyostelium discoideum cDNA clone:ddv61b04, 3' ...   666   0.0    2
(BJ430425) Dictyostelium discoideum cDNA clone:ddv7p03, 3' e...   654   0.0    2
(BJ403232) Dictyostelium discoideum cDNA clone:dds24a13, 3' ...   646   0.0    2
(BJ351172) Dictyostelium discoideum cDNA clone:dda42e08, 3' ...   638   0.0    2
(BJ446500) Dictyostelium discoideum cDNA clone:ddv62m22, 3' ...   601   0.0    2
(BJ446760) Dictyostelium discoideum cDNA clone:ddv63c19, 3' ...   597   0.0    2
(BJ443639) Dictyostelium discoideum cDNA clone:ddv53i15, 3' ...   597   0.0    3
(BJ441553) Dictyostelium discoideum cDNA clone:ddv47f05, 3' ...   597   0.0    2
(BJ436610) Dictyostelium discoideum cDNA clone:ddv31o13, 3' ...   597   0.0    2
(BJ352471) Dictyostelium discoideum cDNA clone:dda46i23, 3' ...   597   0.0    2
(BJ350856) Dictyostelium discoideum cDNA clone:dda41a12, 3' ...   597   0.0    2
(BJ441679) Dictyostelium discoideum cDNA clone:ddv47a16, 3' ...   595   0.0    2
(BJ438790) Dictyostelium discoideum cDNA clone:ddv38a16, 3' ...   595   0.0    2
(BJ408851) Dictyostelium discoideum cDNA clone:dds47m05, 3' ...   595   0.0    3
(BJ383907) Dictyostelium discoideum cDNA clone:ddc47j18, 3' ...   595   0.0    3
(BJ356530) Dictyostelium discoideum cDNA clone:dda60i18, 3' ...   595   0.0    2
(BJ348881) Dictyostelium discoideum cDNA clone:dda34m15, 3' ...   595   0.0    2
(BJ442841) Dictyostelium discoideum cDNA clone:ddv51j06, 3' ...   593   0.0    2
(BJ437197) Dictyostelium discoideum cDNA clone:ddv33c13, 3' ...   593   0.0    2
(BJ409075) Dictyostelium discoideum cDNA clone:dds47n23, 3' ...   593   0.0    2
(BJ406341) Dictyostelium discoideum cDNA clone:dds34o20, 3' ...   593   0.0    2
(BJ443299) Dictyostelium discoideum cDNA clone:ddv52c16, 3' ...   589   0.0    2
(BJ404666) Dictyostelium discoideum cDNA clone:dds29a12, 3' ...   589   0.0    2
(BJ438459) Dictyostelium discoideum cDNA clone:ddv37b05, 3' ...   573   0.0    3
(BJ445513) Dictyostelium discoideum cDNA clone:ddv59n17, 3' ...   565   0.0    2
(BJ444990) Dictyostelium discoideum cDNA clone:ddv58h04, 3' ...   565   0.0    2
(BJ444682) Dictyostelium discoideum cDNA clone:ddv57l01, 3' ...   563   0.0    2
(BJ442633) Dictyostelium discoideum cDNA clone:ddv50b17, 3' ...   561   0.0    2
(BJ446792) Dictyostelium discoideum cDNA clone:ddv63i19, 3' ...   555   0.0    2
(BJ443433) Dictyostelium discoideum cDNA clone:ddv52l23, 3' ...   555   0.0    2
(BJ442555) Dictyostelium discoideum cDNA clone:ddv50b12, 3' ...   555   0.0    2
(BJ439017) Dictyostelium discoideum cDNA clone:ddv39n03, 3' ...   549   0.0    2
(BJ403638) Dictyostelium discoideum cDNA clone:dds25e19, 3' ...   543   0.0    2
(BJ354748) Dictyostelium discoideum cDNA clone:dda54j15, 3' ...   531   0.0    2
(BJ444882) Dictyostelium discoideum cDNA clone:ddv57a22, 3' ...   603   0.0    4
(BJ443513) Dictyostelium discoideum cDNA clone:ddv53m01, 3' ...   557   0.0    3
(BJ352736) Dictyostelium discoideum cDNA clone:dda47b20, 3' ...   591   0.0    4
(BJ444212) Dictyostelium discoideum cDNA clone:ddv55j17, 3' ...   531   0.0    2
(BJ439218) Dictyostelium discoideum cDNA clone:ddv39d20, 3' ...   531   0.0    2
(BJ442951) Dictyostelium discoideum cDNA clone:ddv51n12, 3' ...   559   0.0    2
(BJ403924) Dictyostelium discoideum cDNA clone:dds26a24, 3' ...   549   0.0    4
(BJ438394) Dictyostelium discoideum cDNA clone:ddv37e19, 3' ...   531   0.0    2
(BJ438441) Dictyostelium discoideum cDNA clone:ddv37o22, 3' ...   531   0.0    2
(BJ442187) Dictyostelium discoideum cDNA clone:ddv49i01, 3' ...   531   0.0    2
(BJ438748) Dictyostelium discoideum cDNA clone:ddv38i08, 3' ...   523   0.0    2
(BJ442200) Dictyostelium discoideum cDNA clone:ddv49k02, 3' ...   523   0.0    2
(BJ443070) Dictyostelium discoideum cDNA clone:ddv51f22, 3' ...   531   0.0    2
(BJ439480) Dictyostelium discoideum cDNA clone:ddv40i13, 3' ...   531   0.0    2
(BJ445488) Dictyostelium discoideum cDNA clone:ddv59i17, 3' ...   531   0.0    2
(BJ440001) Dictyostelium discoideum cDNA clone:ddv42g09, 3' ...   525   0.0    2
(BJ439865) Dictyostelium discoideum cDNA clone:ddv41k22, 3' ...   517   0.0    2
(BJ439777) Dictyostelium discoideum cDNA clone:ddv41g13, 3' ...   531   0.0    2
(BJ440194) Dictyostelium discoideum cDNA clone:ddv42o19, 3' ...   525   0.0    2
(BJ440105) Dictyostelium discoideum cDNA clone:ddv42l13, 3' ...   531   0.0    2
(BJ354016) Dictyostelium discoideum cDNA clone:dda52b08, 3' ...   478   0.0    2
(BJ445093) Dictyostelium discoideum cDNA clone:ddv58m10, 3' ...   868   0.0    2
(BJ439600) Dictyostelium discoideum cDNA clone:ddv41a04, 3' ...   488   0.0    3
(BJ351401) Dictyostelium discoideum cDNA clone:dda43f11, 3' ...   537   0.0    2
(BJ352569) Dictyostelium discoideum cDNA clone:dda47n01, 3' ...   500   0.0    3
(BJ410744) Dictyostelium discoideum cDNA clone:ddv1n16, 5' e...   833   0.0    1
(BJ357455) Dictyostelium discoideum cDNA clone:dda63j13, 3' ...   515   0.0    2
(BJ441563) Dictyostelium discoideum cDNA clone:ddv47i02, 3' ...   392   0.0    3
(BJ440664) Dictyostelium discoideum cDNA clone:ddv44j09, 3' ...   392   0.0    3
(BJ357952) Dictyostelium discoideum cDNA clone:dda65d07, 3' ...   531   0.0    2
(BJ440829) Dictyostelium discoideum cDNA clone:ddv44i21, 3' ...   531   0.0    2
(BJ440447) Dictyostelium discoideum cDNA clone:ddv43p17, 3' ...   523   0.0    2
(BJ441159) Dictyostelium discoideum cDNA clone:ddv45h22, 3' ...   523   0.0    2
(BJ351498) Dictyostelium discoideum cDNA clone:dda43m18, 3' ...   523   0.0    2
(BJ440087) Dictyostelium discoideum cDNA clone:ddv42h16, 3' ...   412   0.0    2
(BJ440335) Dictyostelium discoideum cDNA clone:ddv43j10, 3' ...   400   0.0    3
(BJ440716) Dictyostelium discoideum cDNA clone:ddv44c17, 3' ...   400   0.0    3
(BJ383236) Dictyostelium discoideum cDNA clone:ddc52g08, 3' ...   389   0.0    3
(BJ440385) Dictyostelium discoideum cDNA clone:ddv43c18, 3' ...   464   0.0    2
(BJ446525) Dictyostelium discoideum cDNA clone:ddv63b01, 3' ...   531   0.0    2
(BJ441101) Dictyostelium discoideum cDNA clone:ddv45m17, 3' ...   531   0.0    2
(AU266454) Dictyostelium discoideum vegetative cDNA clone:VS...   444   e-180  2
(BJ408438) Dictyostelium discoideum cDNA clone:dds45f24, 3' ...   424   e-178  2
(BJ444062) Dictyostelium discoideum cDNA clone:ddv55h05, 3' ...   307   e-153  2
(BJ438624) Dictyostelium discoideum cDNA clone:ddv38b03, 3' ...   349   e-152  3
(BJ443447) Dictyostelium discoideum cDNA clone:ddv52o20, 3' ...   345   e-150  2
(BJ406138) Dictyostelium discoideum cDNA clone:dds34d11, 3' ...   525   e-145  1
(AU268508) Dictyostelium discoideum vegetative cDNA clone:VS...   523   e-144  1
(BJ445084) Dictyostelium discoideum cDNA clone:ddv58k12, 3' ...   494   e-140  2
(BJ445511) Dictyostelium discoideum cDNA clone:ddv59n14, 3' ...   389   e-137  4
(AU061293) Dictyostelium discoideum slug cDNA, clone SLD691.      361   2e-95  1
(BJ446519) Dictyostelium discoideum cDNA clone:ddv63a01, 3' ...   331   2e-86  1
(BJ387229) Dictyostelium discoideum cDNA clone:dds12n24, 5' ...   216   9e-52  1

>(BJ442944) Dictyostelium discoideum cDNA clone:ddv51m10, 3' end,
           single read.
          Length = 703

 Score = 1390 bits (701), Expect = 0.0
 Identities = 701/701 (100%)
 Strand = Plus / Minus


Query: 12  cgtgatatgagttatgtttatggtattttcactcaagctgctgcatctggtttaattatt 71
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 cgtgatatgagttatgtttatggtattttcactcaagctgctgcatctggtttaattatt 643


Query: 72  ggttttactttttggaatttagatttatcatcttcagatatgaatcaacgtgtatttttc 131
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 ggttttactttttggaatttagatttatcatcttcagatatgaatcaacgtgtatttttc 583


Query: 132 atatttgaaattcttttcttgggtattctctacatctttattgcaattcctcaattttta 191
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 atatttgaaattcttttcttgggtattctctacatctttattgcaattcctcaattttta 523


Query: 192 attcaaaaagcttactttaagaaagattatgcctctaaattttattcttggtgtccattt 251
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 attcaaaaagcttactttaagaaagattatgcctctaaattttattcttggtgtccattt 463


Query: 252 gccatttcaattgtcattgttgaattaccttttgttgcagtcgctggaacaatttgtttc 311
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gccatttcaattgtcattgttgaattaccttttgttgcagtcgctggaacaatttgtttc 403


Query: 312 ttttgttctttttggacagcaggtatttattacaatggtgaatatgatttttatttttat 371
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ttttgttctttttggacagcaggtatttattacaatggtgaatatgatttttatttttat 343


Query: 372 ataactttcatcctcttccttttcatttgtgtttcacttggtcaagttgtatctgccttt 431
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ataactttcatcctcttccttttcatttgtgtttcacttggtcaagttgtatctgccttt 283


Query: 432 tgtttcaatgttatgttgtaacatcagttttaaagaatgtttttgttgattgttcaaatg 491
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tgtttcaatgttatgttgtaacatcagttttaaagaatgtttttgttgattgttcaaatg 223


Query: 492 aagatttaaccaaattctcaaacccaacaaatttaacctgtaaagaatatttcaagccaa 551
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 aagatttaaccaaattctcaaacccaacaaatttaacctgtaaagaatatttcaagccaa 163


Query: 552 cctatggaaatgttcgtgctgttaccaaaggcgatgaaagtgaatgtggttattgtgttt 611
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 cctatggaaatgttcgtgctgttaccaaaggcgatgaaagtgaatgtggttattgtgttt 103


Query: 612 ttaaatcaggtgaagaatattataaaactcttggttggtcttatgaaaaccgtttaagaa 671
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 ttaaatcaggtgaagaatattataaaactcttggttggtcttatgaaaaccgtttaagaa 43


Query: 672 actatggtattttatgggctttctttattttcaacataatt 712
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 42  actatggtattttatgggctttctttattttcaacataatt 2

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,075,114,218
Number of extensions: 73684953
Number of successful extensions: 6949008
Number of sequences better than 10.0: 356
Length of query: 712
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 688
Effective length of database: 97,308,875,965
Effective search space: 66948506663920
Effective search space used: 66948506663920
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7. 8
Homology vs Protein 
Query= Contig-U13715-1 (Contig-U13715-1Q) /CSM_Contig/Contig-U13715-1Q.Seq.d
         (712 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF482389_1(AF482389|pid:none) Dictyostelium discoideum ABC trans...   230   4e-59
AF037042_1(AF037042|pid:none) Dictyostelium discoideum ras-relat...   148   5e-55
AF482390_1(AF482390|pid:none) Dictyostelium discoideum ABC trans...   132   6e-53
AF482393_1(AF482393|pid:none) Dictyostelium discoideum ABC trans...   138   2e-51
AF482391_1(AF482391|pid:none) Dictyostelium discoideum ABC trans...   154   3e-36
AF482396_1(AF482396|pid:none) Dictyostelium discoideum ABC trans...   148   2e-34
AF482395_1(AF482395|pid:none) Dictyostelium discoideum ABC trans...   112   1e-23
AB091269_1(AB091269|pid:none) Magnaporthe grisea ABC2 gene for A...    71   3e-11
AM270224_3(AM270224|pid:none) Aspergillus niger contig An11c0070...    67   5e-10
AJ243113_1(AJ243113|pid:none) Mycosphaerella graminicola atr2 ge...    65   2e-09
AE016815_337(AE016815|pid:none) Ashbya gossypii (= Eremothecium ...    65   2e-09
(P32568) RecName: Full=Protein SNQ2;  &S50992(S50992;S30918;S634...    64   4e-09
X66732_1(X66732|pid:none) S.cerevisiae SNQ2 gene.                      64   4e-09
U42227_3(U42227|pid:none) Saccharomyces cerevisiae replicative m...    63   1e-08
AB028872_1(AB028872|pid:none) Botryotinia fuckeliana gene for BM...    62   1e-08
AJ309281_1(AJ309281|pid:none) Emericella nidulans atrF gene for ...    62   2e-08
AP007155_113(AP007155|pid:none) Aspergillus oryzae RIB40 genomic...    62   2e-08
FN392320_1008(FN392320|pid:none) Pichia pastoris GS115 chromosom...    61   4e-08
AM270335_3(AM270335|pid:none) Aspergillus niger contig An15c0080...    60   7e-08
AP007164_101(AP007164|pid:none) Aspergillus oryzae RIB40 genomic...    60   7e-08
AM920427_990(AM920427|pid:none) Penicillium chrysogenum Wisconsi...    60   7e-08
AY740027_1(AY740027|pid:none) Saccharomyces kudriavzevii IFO 180...    60   7e-08
(O74676) RecName: Full=ABC transporter CDR4;  &AF044921_1(AF0449...    59   1e-07
AM920431_588(AM920431|pid:none) Penicillium chrysogenum Wisconsi...    59   1e-07
AM270165_92(AM270165|pid:none) Aspergillus niger contig An08c010...    59   2e-07
AM270120_41(AM270120|pid:none) Aspergillus niger contig An07c002...    59   2e-07
AM849042_1(AM849042|pid:none) Candida glabrata snq2 gene for ABC...    58   3e-07
AP007161_346(AP007161|pid:none) Aspergillus oryzae RIB40 genomic...    58   3e-07
CP000498_325(CP000498|pid:none) Pichia stipitis CBS 6054 chromos...    58   3e-07
AP007164_758(AP007164|pid:none) Aspergillus oryzae RIB40 genomic...    58   3e-07
AF046120_1(AF046120|pid:none) Candida glabrata ATP-binding casse...    58   3e-07
(O74208) RecName: Full=ATP-binding cassette transporter CGR1; Al...    58   3e-07
AJ888536_1(AJ888536|pid:none) Gibberella moniliformis partial ab...    57   4e-07
AJ276241_1(AJ276241|pid:none) Emericella nidulans mRNA for ABC t...    57   4e-07
AJ243112_1(AJ243112|pid:none) Mycosphaerella graminicola atr1 ge...    57   4e-07
AM269959_32(AM269959|pid:none) Aspergillus niger contig An01c012...    57   4e-07
AM270339_27(AM270339|pid:none) Aspergillus niger contig An15c012...    57   6e-07
AJ309280_1(AJ309280|pid:none) Emericella nidulans atrE gene for ...    57   6e-07
FM992691_312(FM992691|pid:none) Candida dubliniensis CD36 chromo...    57   7e-07
AP007169_247(AP007169|pid:none) Aspergillus oryzae RIB40 genomic...    57   7e-07
AF227914_1(AF227914|pid:none) Venturia inaequalis ATP-binding ca...    57   7e-07
AJ311940_1(AJ311940|pid:none) Aspergillus fumigatus atrF gene fo...    56   9e-07
AB003671_1(AB003671|pid:none) Fission yeast DNA for bfr1+ protei...    56   9e-07
AJ006217_1(AJ006217|pid:none) Botryotinia fuckeliana atrB gene f...    56   9e-07
T43022(T43022) ATP-binding multidrug cassette transport protein ...    56   9e-07
AP007171_324(AP007171|pid:none) Aspergillus oryzae RIB40 genomic...    56   9e-07
AL590182_4(AL590182|pid:none) S.pombe chromosome III cosmid pJ732.     56   9e-07
(P41820) RecName: Full=Brefeldin A resistance protein;  &CU32967...    56   9e-07
CU928176_508(CU928176|pid:none) Zygosaccharomyces rouxii strain ...    56   1e-06
AM920431_1264(AM920431|pid:none) Penicillium chrysogenum Wiscons...    56   1e-06
AF227915_1(AF227915|pid:none) Venturia inaequalis ATP-binding ca...    56   1e-06
AP007161_276(AP007161|pid:none) Aspergillus oryzae RIB40 genomic...    56   1e-06
AM269983_4(AM269983|pid:none) Aspergillus niger contig An01c0360...    56   1e-06
AY077839_1(AY077839|pid:none) Monilinia fructicola ABC transport...    55   2e-06
AM989986_14(AM989986|pid:none) Zygosaccharomyces rouxii strain C...    55   2e-06
AM920435_509(AM920435|pid:none) Penicillium chrysogenum Wisconsi...    55   2e-06
AJ309282_1(AJ309282|pid:none) Emericella nidulans atrG gene for ...    55   2e-06
AF245358_1(AF245358|pid:none) Kluyveromyces lactis multidrug pum...    55   2e-06
DQ470012_1(DQ470012|pid:none) Candida albicans strain TL1 drug r...    55   3e-06
DQ470008_1(DQ470008|pid:none) Candida albicans strain ATCC 10261...    55   3e-06
AB091179_1(AB091179|pid:none) Botryotinia fuckeliana BMR5 gene f...    55   3e-06
DQ470010_1(DQ470010|pid:none) Candida albicans strain TIMM3163 d...    55   3e-06
AB164460_1(AB164460|pid:none) Penicillium digitatum PMR4 gene fo...    55   3e-06
AE017342_580(AE017342|pid:none) Cryptococcus neoformans var. neo...    54   4e-06
CR382138_3(CR382138|pid:none) Debaryomyces hansenii strain CBS76...    54   4e-06
FM992690_379(FM992690|pid:none) Candida dubliniensis CD36 chromo...    54   4e-06
CR382133_160(CR382133|pid:none) Debaryomyces hansenii strain CBS...    54   4e-06
CU928173_168(CU928173|pid:none) Zygosaccharomyces rouxii strain ...    54   4e-06
AF109723_1(AF109723|pid:none) Candida glabrata ATP-binding casse...    54   4e-06
CR382138_722(CR382138|pid:none) Debaryomyces hansenii strain CBS...    54   5e-06
AY911669_1(AY911669|pid:none) Trichoderma atroviride promoter re...    54   5e-06
AM920436_566(AM920436|pid:none) Penicillium chrysogenum Wisconsi...    54   5e-06
AJ272521_1(AJ272521|pid:none) Botryotinia fuckeliana BcatrD gene...    54   5e-06
EF441347_1(EF441347|pid:none) Leptosphaeria maculans ABC transpo...    54   5e-06
CR382128_503(CR382128|pid:none) Yarrowia lipolytica strain CLIB1...    54   6e-06
AM920437_1380(AM920437|pid:none) Penicillium chrysogenum Wiscons...    54   6e-06
AP007169_372(AP007169|pid:none) Aspergillus oryzae RIB40 genomic...    54   6e-06
AM920435_1226(AM920435|pid:none) Penicillium chrysogenum Wiscons...    54   6e-06
CP000502_54(CP000502|pid:none) Pichia stipitis CBS 6054 chromoso...    54   6e-06
D26548_1(D26548|pid:none) Saccharomyces cerevisiae YDR1 gene for...    54   6e-06
AM270305_7(AM270305|pid:none) Aspergillus niger contig An13c0110...    54   6e-06
CR382134_736(CR382134|pid:none) Debaryomyces hansenii chromosome...    53   8e-06
(Q04182) RecName: Full=ATP-dependent permease PDR15;  &S69688(S6...    53   8e-06
AB091178_1(AB091178|pid:none) Botryotinia fuckeliana BMR3 gene f...    53   8e-06
CR382134_714(CR382134|pid:none) Debaryomyces hansenii strain CBS...    53   8e-06
CP000497_277(CP000497|pid:none) Pichia stipitis CBS 6054 chromos...    53   8e-06
AP007155_1203(AP007155|pid:none) Aspergillus oryzae RIB40 genomi...    53   1e-05
AM270320_67(AM270320|pid:none) Aspergillus niger contig An14c013...    52   1e-05
AM920437_2284(AM920437|pid:none) Penicillium chrysogenum Wiscons...    52   1e-05
AE016815_338(AE016815|pid:none) Ashbya gossypii (= Eremothecium ...    52   1e-05
CR382139_636(CR382139|pid:none) Debaryomyces hansenii strain CBS...    52   2e-05
AM270303_10(AM270303|pid:none) Aspergillus niger contig An13c009...    52   2e-05
CU633898_48(CU633898|pid:none) Podospora anserina genomic DNA ch...    52   2e-05
AP007165_58(AP007165|pid:none) Aspergillus oryzae RIB40 genomic ...    52   2e-05
(P40550) RecName: Full=ATP-dependent permease PDR11;  &S48442(S4...    52   2e-05
EU530631_1(EU530631|pid:none) Cercospora nicotianae ABC transpor...    52   2e-05
(Q08409) RecName: Full=ATP-dependent permease AUS1;  &S66876(S66...    51   3e-05
Z74920_1(Z74920|pid:none) S.cerevisiae chromosome XV reading fra...    51   3e-05
X87331_1(X87331|pid:none) S.cerevisiae genomic DNA (chromosome X...    51   3e-05
(P53756) RecName: Full=Uncharacterized ABC transporter ATP-bindi...    51   3e-05
AB010442_1(AB010442|pid:none) Penicillium digitatum gene for PMR...    51   4e-05
AJ439074_1(AJ439074|pid:none) Candida dubliniensis cdr1 gene for...    51   4e-05
DQ413178_1(DQ413178|pid:none) Penicillium griseofulvum strain NR...    51   4e-05
CU928169_722(CU928169|pid:none) Kluyveromyces thermotolerans str...    50   5e-05
AB297452_1(AB297452|pid:none) Candida glabrata CgAUS1 gene for A...    50   9e-05
AJ318062_1(AJ318062|pid:none) Cryptococcus neoformans mRNA for A...    49   1e-04
AE017352_282(AE017352|pid:none) Cryptococcus neoformans var. neo...    49   1e-04
AB164459_1(AB164459|pid:none) Penicillium digitatum PMR3 gene fo...    49   1e-04
DQ903908_1(DQ903908|pid:none) Cryptococcus neoformans var. grubi...    49   1e-04
AM920437_1753(AM920437|pid:none) Penicillium chrysogenum Wiscons...    49   2e-04
DQ462358_1(DQ462358|pid:none) Candida albicans strain ATCC 10261...    49   2e-04
DQ462360_1(DQ462360|pid:none) Candida albicans strain TIMM3163 d...    49   2e-04
AM920427_19(AM920427|pid:none) Penicillium chrysogenum Wisconsin...    49   2e-04
EF051699_2(EF051699|pid:none) Penicillium expansum strain NCPT44...    49   2e-04
FN392319_714(FN392319|pid:none) Pichia pastoris GS115 chromosome...    48   3e-04
CU928178_374(CU928178|pid:none) Zygosaccharomyces rouxii strain ...    48   3e-04
T30566(T30566) ATP-binding cassette multidrug transport protein ...    48   3e-04
AM270168_7(AM270168|pid:none) Aspergillus niger contig An08c0130...    47   4e-04
AM270318_7(AM270318|pid:none) Aspergillus niger contig An14c0110...    47   6e-04
EU309504_1(EU309504|pid:none) Issatchenkia orientalis strain 89....    47   6e-04
FJ445763_1(FJ445763|pid:none) Issatchenkia orientalis strain 901...    47   6e-04
T30567(T30567) ATP-binding cassette multidrug transport protein ...    47   6e-04
EU296431_1(EU296431|pid:none) Issatchenkia orientalis strain 89....    47   6e-04
DQ903906_1(DQ903906|pid:none) Issatchenkia orientalis strain B23...    47   6e-04
FJ445761_1(FJ445761|pid:none) Issatchenkia orientalis strain 892...    47   6e-04
EU309503_1(EU309503|pid:none) Issatchenkia orientalis strain 89....    47   6e-04
AP007150_4(AP007150|pid:none) Aspergillus oryzae RIB40 genomic D...    47   6e-04
AM270193_5(AM270193|pid:none) Aspergillus niger contig An09c0040...    47   6e-04
CP000498_690(CP000498|pid:none) Pichia stipitis CBS 6054 chromos...    47   8e-04
AM270048_70(AM270048|pid:none) Aspergillus niger contig An03c007...    47   8e-04
EF028634_2(EF028634|pid:none) Byssochlamys nivea strain NRRL 261...    45   0.002
CR382122_390(CR382122|pid:none) Kluyveromyces lactis strain NRRL...    45   0.002
AF364105_1(AF364105|pid:none) Mycosphaerella graminicola ATP-bin...    43   0.011
AF482384_1(AF482384|pid:none) Dictyostelium discoideum ABC trans...    41   0.032
(Q54TV2) RecName: Full=ABC transporter G family member 5; AltNam...    41   0.032
AE016819_559(AE016819|pid:none) Ashbya gossypii (= Eremothecium ...    40   0.093
FN392322_869(FN392322|pid:none) Pichia pastoris GS115 chromosome...    39   0.21
(Q54TV1) RecName: Full=ABC transporter G family member 6; AltNam...    38   0.27
AP007159_148(AP007159|pid:none) Aspergillus oryzae RIB40 genomic...    37   0.59
CR382138_723(CR382138|pid:none) Debaryomyces hansenii strain CBS...    37   0.60
(Q7PC86) RecName: Full=Probable pleiotropic drug resistance prot...    36   1.0
AM849476_1(AM849476|pid:none) Catharanthus roseus mRNA for ATP B...    36   1.0
AC007591_15(AC007591|pid:none) Arabidopsis thaliana chromosome 1...    36   1.0
(Q9SIT6) RecName: Full=White-brown complex homolog protein 5;  &...    36   1.3
AY074515_1(AY074515|pid:none) Arabidopsis thaliana putative ABC ...    35   1.7
AY050448_1(AY050448|pid:none) Arabidopsis thaliana AT3g16340/MYA...    35   1.7
(Q9XIE2) RecName: Full=Pleiotropic drug resistance protein 8;  &...    35   1.7
(Q94A18) RecName: Full=Pleiotropic drug resistance protein 1;  &...    35   1.7
(Q9SZR9) RecName: Full=Probable white-brown complex homolog prot...    34   5.0
AP005795_18(AP005795|pid:none) Oryza sativa Japonica Group genom...    33   6.6
CP000792_1319(CP000792|pid:none) Campylobacter concisus 13826, c...    33   6.6
(Q949G3) RecName: Full=Pleiotropic drug resistance protein 1; Al...    33   8.6
AP008207_2379(AP008207|pid:none) Oryza sativa (japonica cultivar...    33   8.6
(Q7FMW4) RecName: Full=Pleiotropic drug resistance protein 15;  ...    33   8.6

>AF482389_1(AF482389|pid:none) Dictyostelium discoideum ABC
            transporter AbcG10 (abcG10) gene, complete cds.
          Length = 1466

 Score =  230 bits (586), Expect = 4e-59
 Identities = 115/146 (78%), Positives = 115/146 (78%)
 Frame = +3

Query: 12   RDMSYVYGIFTQAAASGLIIGFTFWNLDLSSSDMNQRVXXXXXXXXXXXXXXXXXXPQFL 191
            RDMSYVYGIFTQAAASGLIIGFTFWNLDLSSSDMNQRV                  PQFL
Sbjct: 1174 RDMSYVYGIFTQAAASGLIIGFTFWNLDLSSSDMNQRVFFIFEILFLGILYIFIAIPQFL 1233

Query: 192  IQKAYFKKDYASKFYSWCPFAISIVIVELPFVAVAGTICFFCSFWTAGIYYNGEYDXXXX 371
            IQKAYFKKDYASKFYSWCPFAISIVIVELPFVAVAGTICFFCSFWTAGIYYNGEYD
Sbjct: 1234 IQKAYFKKDYASKFYSWCPFAISIVIVELPFVAVAGTICFFCSFWTAGIYYNGEYDFYFY 1293

Query: 372  XXXXXXXXXCVSLGQVVSAFCFNVML 449
                     CVSLGQVVSAFCFNVML
Sbjct: 1294 ITFILFLFICVSLGQVVSAFCFNVML 1319

 Score =  197 bits (502), Expect = 2e-49
 Identities = 98/121 (80%), Positives = 101/121 (83%), Gaps = 3/121 (2%)
 Frame = +2

Query: 359  FLF---LYNFHPLPFHLCFTWSSCICLLFQCYVVTSVLKNVFVDCSNEDLTKFSNPTNLT 529
            FLF   L  +  +P    F + S  C  F   VVTSVLKNVFVDCSNEDLTKFSNPTNLT
Sbjct: 1332 FLFCGVLVPYEQIPNFWKFVYHSNPCRYFLEGVVTSVLKNVFVDCSNEDLTKFSNPTNLT 1391

Query: 530  CKEYFKPTYGNVRAVTKGDESECGYCVFKSGEEYYKTLGWSYENRLRNYGILWAFFIFNI 709
            CKEYFKPTYGNVRAVTKGDESECGYCVFKSGEEYYKTLGWSYENRLRNYGILWAFFIFNI
Sbjct: 1392 CKEYFKPTYGNVRAVTKGDESECGYCVFKSGEEYYKTLGWSYENRLRNYGILWAFFIFNI 1451

Query: 710  I 712
            I
Sbjct: 1452 I 1452

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,025,271,722
Number of extensions: 19446863
Number of successful extensions: 46243
Number of sequences better than 10.0: 154
Number of HSP's gapped: 46047
Number of HSP's successfully gapped: 272
Length of query: 237
Length of database: 1,051,180,864
Length adjustment: 125
Effective length of query: 112
Effective length of database: 646,610,989
Effective search space: 72420430768
Effective search space used: 72420430768
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
PSORT 

 psg: 0.97  gvh: 0.55  alm: 0.17  top: 0.80  tms: 0.20  mit: 0.26  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 1.00  m_ : 0.00 

	 28.0 %: endoplasmic reticulum
	 24.0 %: plasma membrane
	 12.0 %: nuclear
	 12.0 %: mitochondrial
	 12.0 %: vacuolar
	  4.0 %: cytoskeletal
	  4.0 %: Golgi
	  4.0 %: cytoplasmic

>> prediction for Contig-U13715-1 is end
VS (DIR, S) 0
VH (FL, L) 1
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0