| Contig-U13534-1 |
| Contig ID |
Contig-U13534-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
587 |
| Chromosome number (1..6, M) |
2 |
| Chromosome length |
8467578 |
| Start point |
4568056 |
| End point |
4567489 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
2 |
| Number of EST |
2 |
| Link to clone list |
U13534 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.12.11 |
| Homology vs DNA |
Query= Contig-U13534-1 (Contig-U13534-1Q) /CSM_Contig/Contig-U13534-1Q.Seq.d
(587 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ418082) Dictyostelium discoideum cDNA clone:ddv31h18, 5' ... 1164 0.0 1
(BJ418793) Dictyostelium discoideum cDNA clone:ddv34d01, 5' ... 969 0.0 2
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 406 0.0 6
(BJ436580) Dictyostelium discoideum cDNA clone:ddv31h18, 3' ... 68 3e-17 3
(BJ437362) Dictyostelium discoideum cDNA clone:ddv34d01, 3' ... 68 3e-17 3
(EH014080) USDA-FP_186816 Lysiphlebus testaceipes adult whol... 62 7e-17 3
(EH013163) USDA-FP_185990 Lysiphlebus testaceipes adult whol... 62 7e-17 3
(BP189262) Dugesia japonica cDNA, clone: 06265_HH, expressed... 74 1e-12 2
(BP189128) Dugesia japonica cDNA, clone: 06086_HH, expressed... 74 1e-12 2
(BP187150) Dugesia japonica cDNA, clone: 00666_HH, expressed... 74 1e-12 2
(EC825841) SME00002495 esmbsro2 Sawyeria marylandensis cDNA,... 56 2e-12 2
(EC825570) SME00006960 esmbsro2 Sawyeria marylandensis cDNA,... 56 2e-12 2
(FC655538) CAXW14277.fwd CAXW Lottia gigantea from female go... 66 2e-11 2
(AU266066) Dictyostelium discoideum vegetative cDNA clone:VS... 46 2e-11 3
(FC739260) CBBI11080.fwd CBBI Lottia gigantea 26h,37h,61h La... 66 2e-11 2
(AU269004) Dictyostelium discoideum vegetative cDNA clone:VS... 46 2e-11 3
(FC655565) CAXW14290.fwd CAXW Lottia gigantea from female go... 66 2e-11 2
(FC671634) CAXW8266.fwd CAXW Lottia gigantea from female gon... 66 2e-11 2
(AU267425) Dictyostelium discoideum vegetative cDNA clone:VS... 46 2e-11 3
(FC564462) CAWF551.fwd CAWF Lottia gigantea from mantle (H) ... 66 2e-11 2
(AU266455) Dictyostelium discoideum vegetative cDNA clone:VS... 46 2e-11 3
(AU266718) Dictyostelium discoideum vegetative cDNA clone:VS... 46 2e-11 3
(AU266186) Dictyostelium discoideum vegetative cDNA clone:VS... 46 2e-11 3
(FC796201) CBGC24038.fwd CBGC Lottia gigantea 15h 18h embryo... 66 2e-11 2
(FC650540) CAXW11402.fwd CAXW Lottia gigantea from female go... 66 2e-11 2
(FC731869) CBBG6905.fwd CBBG Lottia gigantea 12,15,18h embry... 66 2e-11 2
(FC647721) CAXU9242.fwd CAXU Lottia gigantea from female gon... 66 2e-11 2
(FC565176) CAWF588.fwd CAWF Lottia gigantea from mantle (H) ... 66 2e-11 2
(FC654203) CAXW13508.fwd CAXW Lottia gigantea from female go... 66 2e-11 2
(FC806752) CBGC8487.fwd CBGC Lottia gigantea 15h 18h embryos... 66 2e-11 2
(FC654963) CAXW13945.fwd CAXW Lottia gigantea from female go... 66 2e-11 2
(FC716272) CBBG10704.fwd CBBG Lottia gigantea 12,15,18h embr... 66 2e-11 2
(FC787019) CBGC17121.fwd CBGC Lottia gigantea 15h 18h embryo... 66 2e-11 2
(FC655574) CAXW14295.fwd CAXW Lottia gigantea from female go... 66 2e-11 2
(FC718742) CBBG12333.fwd CBBG Lottia gigantea 12,15,18h embr... 66 2e-11 2
(FC742072) CBBI12857.fwd CBBI Lottia gigantea 26h,37h,61h La... 66 2e-11 2
(FC748959) CBBI4244.fwd CBBI Lottia gigantea 26h,37h,61h Lar... 66 2e-11 2
(FC725523) CBBG2879.fwd CBBG Lottia gigantea 12,15,18h embry... 66 2e-11 2
(FC801231) CBGC4253.fwd CBGC Lottia gigantea 15h 18h embryos... 66 2e-11 2
(FC722132) CBBG14479.fwd CBBG Lottia gigantea 12,15,18h embr... 66 2e-11 2
(FC786313) CBGC16327.fwd CBGC Lottia gigantea 15h 18h embryo... 66 2e-11 2
(FC777036) CBGC10130.fwd CBGC Lottia gigantea 15h 18h embryo... 66 2e-11 2
(FC559051) CAWF2084.fwd CAWF Lottia gigantea from mantle (H)... 66 2e-11 2
(FC597486) CAXS10488.fwd CAXS Lottia gigantea from head, foo... 66 3e-11 2
(FC767327) CBBN3737.fwd CBBN Lottia gigantea 3,4,5,6.5d Larv... 66 3e-11 2
(FC636299) CAXU1447.fwd CAXU Lottia gigantea from female gon... 66 3e-11 2
(FC666940) CAXW5188.fwd CAXW Lottia gigantea from female gon... 66 3e-11 2
(FC596466) CAXP9866.fwd CAXP Lottia gigantea from head, foot... 66 3e-11 2
(FC605859) CAXS2367.fwd CAXS Lottia gigantea from head, foot... 66 3e-11 2
(FC635539) CAXT984.fwd CAXT Lottia gigantea from mantle Lott... 66 3e-11 2
(FC732974) CBBG7585.fwd CBBG Lottia gigantea 12,15,18h embry... 66 3e-11 2
(FC724501) CBBG2178.fwd CBBG Lottia gigantea 12,15,18h embry... 66 3e-11 2
(FC786666) CBGC1689.fwd CBGC Lottia gigantea 15h 18h embryos... 66 3e-11 2
(FC663449) CAXW3260.fwd CAXW Lottia gigantea from female gon... 66 3e-11 2
(FC632466) CAXT8195.fwd CAXT Lottia gigantea from mantle Lot... 66 3e-11 2
(FC782691) CBGC13869.fwd CBGC Lottia gigantea 15h 18h embryo... 66 3e-11 2
(FC630867) CAXT7356.fwd CAXT Lottia gigantea from mantle Lot... 66 3e-11 2
(BJ367586) Dictyostelium discoideum cDNA clone:ddc43c09, 5' ... 46 3e-11 3
(FC595513) CAXP9272.fwd CAXP Lottia gigantea from head, foot... 66 3e-11 2
(FC709152) CAXY5633.fwd CAXY Lottia gigantea from male gonad... 66 3e-11 2
(FC628462) CAXT6082.fwd CAXT Lottia gigantea from mantle Lot... 66 3e-11 2
(FC713741) CAXY8504.fwd CAXY Lottia gigantea from male gonad... 66 3e-11 2
(FC623163) CAXT3179.fwd CAXT Lottia gigantea from mantle Lot... 66 3e-11 2
(FC602130) CAXS13921.fwd CAXS Lottia gigantea from head, foo... 66 3e-11 2
(FC605382) CAXS2079.fwd CAXS Lottia gigantea from head, foot... 66 3e-11 2
(FC622528) CAXT2805.fwd CAXT Lottia gigantea from mantle Lot... 66 3e-11 2
(FC601002) CAXS13235.fwd CAXS Lottia gigantea from head, foo... 66 3e-11 2
(FC671302) CAXW8036.fwd CAXW Lottia gigantea from female gon... 66 3e-11 2
(FC660200) CAXW1759.fwd CAXW Lottia gigantea from female gon... 66 3e-11 2
(AU268327) Dictyostelium discoideum vegetative cDNA clone:VS... 46 3e-11 3
(AU263688) Dictyostelium discoideum vegetative cDNA clone:VS... 46 3e-11 3
(BJ333824) Dictyostelium discoideum cDNA clone:dda44l06, 5' ... 46 3e-11 3
(AU263687) Dictyostelium discoideum vegetative cDNA clone:VS... 46 4e-11 3
(EH015049) USDA-FP_187688 Lysiphlebus testaceipes adult whol... 62 4e-11 2
(AU060167) Dictyostelium discoideum slug cDNA, clone SLA506. 46 4e-11 3
(L09720) Dictyostelium discoideum GTP-binding protein (TC4/R... 46 5e-11 3
(AU265491) Dictyostelium discoideum vegetative cDNA clone:VS... 46 8e-10 3
(BJ333562) Dictyostelium discoideum cDNA clone:dda43n01, 5' ... 46 1e-09 3
(CA758831) BR030030000_PLATE_G01_7_006.ab1 OA Oryza sativa J... 44 2e-09 3
(EG726098) GTE00017227 Guillardia theta non-normalised Guill... 46 2e-07 2
(EG718091) GTE00005391 Guillardia theta non-normalised Guill... 46 2e-07 2
(EG727976) GTE00004778 Guillardia theta non-normalised Guill... 46 2e-07 2
(EG728490) GTE00010469 Guillardia theta non-normalised Guill... 46 3e-07 2
(EG717737) GTE00006190 Guillardia theta non-normalised Guill... 46 3e-07 2
(DQ383785) Rhodomonas salina 40S ribosomal protein 2 (rps2) ... 48 3e-07 3
(EH113299) XCM-P08_E08.SEQ Adult Xenopsylla cheopis salivary... 68 4e-07 1
(FF419191) G125P60002RG9.T0 Acorn worm blastula/gastrula pCM... 46 8e-07 2
(FF423297) G125P60077RF11.T0 Acorn worm blastula/gastrula pC... 46 9e-07 2
(FF429725) G142P60109RH11.T0 Acorn worm juvenile pCMVSport6 ... 46 9e-07 2
(FF448850) G178P60106RE2.T0 Acorn worm gastrula/neurula pCMV... 46 9e-07 2
(FF448215) G178P60095RH12.T0 Acorn worm gastrula/neurula pCM... 46 9e-07 2
(FF420584) G125P60029RD10.T0 Acorn worm blastula/gastrula pC... 46 9e-07 2
(FF438333) G142P60231RB7.T0 Acorn worm juvenile pCMVSport6 l... 46 9e-07 2
(FF429920) G142P60112RD10.T0 Acorn worm juvenile pCMVSport6 ... 46 9e-07 2
(FF444770) G178P60051RC8.T0 Acorn worm gastrula/neurula pCMV... 46 9e-07 2
(FF427402) G142P60075RD9.T0 Acorn worm juvenile pCMVSport6 l... 46 9e-07 2
(FF656315) G826P5273RD6.T0 Acorn worm normalized juvenile pE... 46 9e-07 2
(FF437289) G142P60215RE1.T0 Acorn worm juvenile pCMVSport6 l... 46 9e-07 2
(FF436380) G142P60203RD8.T0 Acorn worm juvenile pCMVSport6 l... 46 1e-06 2
(FF468371) G613P6018RC10.T0 Acorn worm blastula/gastrula pCM... 46 1e-06 2
>(BJ418082) Dictyostelium discoideum cDNA clone:ddv31h18, 5' end,
single read.
Length = 587
Score = 1164 bits (587), Expect = 0.0
Identities = 587/587 (100%)
Strand = Plus / Plus
Query: 1 cctactggattttaaaatgtcaacatttaatattagtgatattgattgcggagctacttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctactggattttaaaatgtcaacatttaatattagtgatattgattgcggagctacttt 60
Query: 61 catcttatgaaaaagcaataggagaacaaataccaattgaggatgaagatcatagtccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catcttatgaaaaagcaataggagaacaaataccaattgaggatgaagatcatagtccaa 120
Query: 121 ttgaacaaaaagcttatcaaaatattaaaccaattgatattaaaaatggacccatcaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgaacaaaaagcttatcaaaatattaaaccaattgatattaaaaatggacccatcaaat 180
Query: 181 taatattagttggtgatagtggtgttggtaagactacatttttaaaacgtcatataatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taatattagttggtgatagtggtgttggtaagactacatttttaaaacgtcatataatag 240
Query: 241 gcgaatttcaaaaaagccatattcctacggttggagtagaactaagtaatctaattcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcgaatttcaaaaaagccatattcctacggttggagtagaactaagtaatctaattcttt 300
Query: 301 acactaatatcggcaatgttaattttgatatttgggatacttgtggtgatgaaaaatttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acactaatatcggcaatgttaattttgatatttgggatacttgtggtgatgaaaaatttg 360
Query: 361 aagtatttagacatttatattatgttggaagtcaatgtgcaattattatgtttgatgttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagtatttagacatttatattatgttggaagtcaatgtgcaattattatgtttgatgttt 420
Query: 421 cttcaagagtttcatataggaatgtaccaagttggtttaatgaattaacaaaggaattag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cttcaagagtttcatataggaatgtaccaagttggtttaatgaattaacaaaggaattag 480
Query: 481 gtaataatataccaattattttagttggtaataaagttgatatcaaagatcgtaaagtta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtaataatataccaattattttagttggtaataaagttgatatcaaagatcgtaaagtta 540
Query: 541 aagcaaaggaaattaattttcatcgtagtaagaatattcactattgt 587
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aagcaaaggaaattaattttcatcgtagtaagaatattcactattgt 587
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 776,750,805
Number of extensions: 46715581
Number of successful extensions: 3725310
Number of sequences better than 10.0: 2202
Length of query: 587
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 564
Effective length of database: 93,106,754,628
Effective search space: 52512209610192
Effective search space used: 52512209610192
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7. 7 |
| Homology vs Protein |
Query= Contig-U13534-1 (Contig-U13534-1Q) /CSM_Contig/Contig-U13534-1Q.Seq.d
(587 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC116957_29(AC116957|pid:none) Dictyostelium discoideum chromoso... 324 1e-87
(P32836) RecName: Full=GTP-binding nuclear protein GSP2/CNR2; &... 182 6e-45
(Q74ZA9) RecName: Full=GTP-binding nuclear protein GSP1/Ran; &A... 181 1e-44
CR382121_184(CR382121|pid:none) Kluyveromyces lactis strain NRRL... 181 1e-44
JC1455(JC1455;S20712)GTP-binding protein Ran/TC4 - dog 181 1e-44
DQ414544_1(DQ414544|pid:none) Suberites domuncula Ran gene, comp... 179 4e-44
(Q6FR65) RecName: Full=GTP-binding nuclear protein GSP1/Ran; &C... 179 5e-44
EF103373_1(EF103373|pid:none) Haliotis discus discus Ran-1-prov ... 179 5e-44
(P38545) RecName: Full=GTP-binding nuclear protein Ran; AltName:... 178 8e-44
AM910991_150(AM910991|pid:none) Plasmodium knowlesi strain H chr... 178 8e-44
(P42558) RecName: Full=GTP-binding nuclear protein Ran; AltName:... 178 1e-43
BC041293_1(BC041293|pid:none) Xenopus laevis RAN, member RAS onc... 178 1e-43
PDBN(1RRP)A MOL_ID: 1;MOL_ID: 1; MOLECULE: RAN; MOLECULE: RAN; C... 178 1e-43
(P52301) RecName: Full=GTP-binding nuclear protein Ran; AltName:... 178 1e-43
(Q3T054) RecName: Full=GTP-binding nuclear protein Ran; AltName:... 178 1e-43
BC004272_1(BC004272|pid:none) Homo sapiens RAN, member RAS oncog... 178 1e-43
AY890940_1(AY890940|pid:none) Synthetic construct Homo sapiens c... 178 1e-43
CU928171_624(CU928171|pid:none) Kluyveromyces thermotolerans str... 178 1e-43
CR761555_1(CR761555|pid:none) Xenopus tropicalis finished cDNA, ... 178 1e-43
BC072000_1(BC072000|pid:none) Homo sapiens RAN, member RAS oncog... 178 1e-43
AY890939_1(AY890939|pid:none) Synthetic construct Homo sapiens c... 178 1e-43
AF295122_1(AF295122|pid:none) Plasmodium chabaudi ras-like nucle... 177 1e-43
(O17915) RecName: Full=GTP-binding nuclear protein ran-1; AltNam... 177 1e-43
PDBN(1QG4)A MOL_ID: 1;MOL_ID: 1; MOLECULE: RAN; MOLECULE: RAN; C... 177 2e-43
AJ012827_1(AJ012827|pid:none) Salmo salar mRNA for Ran protein, ... 177 2e-43
(P33519) RecName: Full=GTP-binding nuclear protein Ran; AltName:... 177 2e-43
(Q9YGC0) RecName: Full=GTP-binding nuclear protein Ran; AltName:... 177 2e-43
BT075634_1(BT075634|pid:none) Osmerus mordax clone omor-eva-505-... 177 2e-43
(Q7ZZX9) RecName: Full=GTP-binding nuclear protein Ran; AltName:... 177 2e-43
CU633438_787(CU633438|pid:none) Podospora anserina genomic DNA c... 177 2e-43
A99104(A99104) GTP-binding nuclear protein RAN [imported] - Guil... 176 3e-43
BT082795_1(BT082795|pid:none) Anoplopoma fimbria clone afim-evh-... 176 3e-43
CP000499_469(CP000499|pid:none) Pichia stipitis CBS 6054 chromos... 176 4e-43
CR382138_83(CR382138|pid:none) Debaryomyces hansenii strain CBS7... 176 4e-43
PDBN(1QG2)A MOL_ID: 1;MOL_ID: 1; MOLECULE: RAN; MOLECULE: RAN; C... 176 4e-43
AK006350_1(AK006350|pid:none) Mus musculus adult male testis cDN... 176 4e-43
BT081477_1(BT081477|pid:none) Rana catesbeiana clone rcat-evr-51... 176 4e-43
CP000881_18(CP000881|pid:none) Hemiselmis andersenii chromosome ... 176 5e-43
BT078267_1(BT078267|pid:none) Lepeophtheirus salmonis Pacific fo... 176 5e-43
BT080705_1(BT080705|pid:none) Caligus clemensi clone ccle-evs-52... 176 5e-43
EF519305_1(EF519305|pid:none) Penicillium marneffei small GTPase... 175 7e-43
AM920437_126(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 175 9e-43
AX885042_1(AX885042|pid:none) Sequence 905 from Patent EP1033401. 174 1e-42
AJ608268_1(AJ608268|pid:none) Chironomus tentans ran1 mRNA for G... 174 1e-42
GN105805_1(GN105805|pid:none) Sequence 10586 from Patent WO20090... 174 2e-42
DQ399506_1(DQ399506|pid:none) Ictalurus punctatus clone SFFE10R ... 174 2e-42
BT050245_1(BT050245|pid:none) Salmo salar clone ssal-eve-578-306... 173 3e-42
BT057518_1(BT057518|pid:none) Salmo salar clone ssal-rgb2-597-13... 173 3e-42
DQ090494_1(DQ090494|pid:none) Marsupenaeus japonicus Ras-related... 173 3e-42
DQ311402_1(DQ311402|pid:none) Bombyx mori GTP-binding nuclear pr... 173 4e-42
DQ083698_1(DQ083698|pid:none) Trichophyton rubrum GTP-binding pr... 173 4e-42
(P38542) RecName: Full=GTP-binding nuclear protein Ran; AltName:... 172 5e-42
FN392320_476(FN392320|pid:none) Pichia pastoris GS115 chromosome... 172 6e-42
BT070583_1(BT070583|pid:none) Picea sitchensis clone WS02737_K24... 172 8e-42
BT074323_1(BT074323|pid:none) Oncorhynchus mykiss clone omyk-evo... 172 8e-42
FN357583_29(FN357583|pid:none) Schistosoma mansoni genome sequen... 172 8e-42
CR954213_121(CR954213|pid:none) Ostreococcus tauri strain OTTH05... 171 1e-41
(P41915) RecName: Full=GTP-binding nuclear protein Ran; AltName:... 171 1e-41
(A2WSI7) RecName: Full=GTP-binding nuclear protein Ran-1; ... 171 1e-41
CP001327_459(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 171 2e-41
BC082086_1(BC082086|pid:none) Rattus norvegicus similar to RAN p... 170 2e-41
EF146191_1(EF146191|pid:none) Populus trichocarpa clone WS0116_B... 170 3e-41
GN106029_1(GN106029|pid:none) Sequence 10810 from Patent WO20090... 170 3e-41
AF220950_1(AF220950|pid:none) Drosophila melanogaster GTP-bindin... 170 3e-41
CS560114_1(CS560114|pid:none) Sequence 701 from Patent WO2006032... 170 3e-41
DQ222510_1(DQ222510|pid:none) Solanum tuberosum clone 117B11 unk... 170 3e-41
EF145008_1(EF145008|pid:none) Populus trichocarpa clone WS0111_I... 170 3e-41
AC148176_4(AC148176|pid:none) Medicago truncatula clone mth2-3j1... 170 3e-41
(P41918) RecName: Full=GTP-binding nuclear protein Ran-A1; &GN1... 170 3e-41
CS559762_1(CS559762|pid:none) Sequence 349 from Patent WO2006032... 170 3e-41
AF495716_1(AF495716|pid:none) Helianthus annuus GTP-binding prot... 170 3e-41
(P54765) RecName: Full=GTP-binding nuclear protein Ran1A; Flags:... 170 3e-41
AC148176_6(AC148176|pid:none) Medicago truncatula clone mth2-3j1... 170 3e-41
GN105945_1(GN105945|pid:none) Sequence 10726 from Patent WO20090... 170 3e-41
X97380_1(X97380|pid:none) A.thaliana mRNA for AtRan2 protein. 170 3e-41
AX080089_1(AX080089|pid:none) Sequence 9 from Patent WO0107600. 170 3e-41
BT071371_1(BT071371|pid:none) Picea sitchensis clone WS0283_N05 ... 170 3e-41
AK339964_1(AK339964|pid:none) Acyrthosiphon pisum ACYPI004024 mR... 170 3e-41
AK339965_1(AK339965|pid:none) Acyrthosiphon pisum ACYPI004024 mR... 170 3e-41
(P38544) RecName: Full=GTP-binding nuclear protein Ran; AltName:... 170 3e-41
BT051252_1(BT051252|pid:none) Medicago truncatula clone MTYF1_F2... 170 3e-41
GN106099_1(GN106099|pid:none) Sequence 10880 from Patent WO20090... 170 3e-41
(P38547) RecName: Full=GTP-binding nuclear protein Ran2; AltName... 170 3e-41
GN106101_1(GN106101|pid:none) Sequence 10882 from Patent WO20090... 170 3e-41
DQ360847_1(DQ360847|pid:none) Brassica napus cultivar Westar eti... 169 4e-41
GN105937_1(GN105937|pid:none) Sequence 10718 from Patent WO20090... 169 4e-41
GN105987_1(GN105987|pid:none) Sequence 10768 from Patent WO20090... 169 4e-41
EF083738_1(EF083738|pid:none) Picea sitchensis clone WS02725_A13... 169 4e-41
GN105935_1(GN105935|pid:none) Sequence 10716 from Patent WO20090... 169 4e-41
GN105989_1(GN105989|pid:none) Sequence 10770 from Patent WO20090... 169 4e-41
DQ090493_1(DQ090493|pid:none) Marsupenaeus japonicus Ras-related... 169 5e-41
AM502243_148(AM502243|pid:none) Leishmania infantum chromosome 2... 169 5e-41
BT061727_1(BT061727|pid:none) Zea mays full-length cDNA clone ZM... 169 5e-41
GN105925_1(GN105925|pid:none) Sequence 10706 from Patent WO20090... 169 5e-41
CS559736_1(CS559736|pid:none) Sequence 323 from Patent WO2006032... 169 7e-41
GN105951_1(GN105951|pid:none) Sequence 10732 from Patent WO20090... 168 1e-40
EF145760_1(EF145760|pid:none) Populus trichocarpa clone WS0113_D... 168 1e-40
CR940347_472(CR940347|pid:none) Theileria annulata strain Ankara... 167 1e-40
(Q8TFK3) RecName: Full=GTP-binding nuclear protein GSP1/Ran; &A... 167 2e-40
PDBN(1QBK)C MOL_ID: 1;MOL_ID: 1; MOLECULE: KARYOPHERIN BETA2; MO... 166 4e-40
X97381_1(X97381|pid:none) A.thaliana mRNA for AtRan3 protein. 166 4e-40
(A2YEQ6) RecName: Full=GTP-binding nuclear protein Ran-3; ... 165 7e-40
AC159425_5(AC159425|pid:none) Trypanosoma brucei chromosome 3 cl... 165 7e-40
L16790_1(L16790|pid:none) Arabidopsis thaliana small Ras-like GT... 164 1e-39
AF017991_1(AF017991|pid:none) Arabidopsis thaliana salt stress i... 164 1e-39
AF542011_1(AF542011|pid:none) Griffithsia japonica GTP-binding n... 158 9e-38
U17086_1(U17086|pid:none) Trypanosoma brucei rhodesiense RAN/TC4... 157 2e-37
AY542974_1(AY542974|pid:none) Bigelowiella natans GTP binding nu... 153 4e-36
FN357583_28(FN357583|pid:none) Schistosoma mansoni genome sequen... 150 2e-35
AY915583_1(AY915583|pid:none) Schistosoma japonicum SJCHGC07794 ... 142 9e-33
(Q9VUN3) RecName: Full=GTP-binding nuclear protein Ran-like; &A... 137 2e-31
AC124971_19(AC124971|pid:none) Medicago truncatula clone mth2-22... 137 2e-31
DQ206495_1(DQ206495|pid:none) Priapulus caudatus isolate TOA5 Ra... 134 1e-30
DQ206516_1(DQ206516|pid:none) Suberites fuscus isolate TOA5 Ras-... 133 3e-30
DQ158857_103(DQ158857|pid:none) Bigelowiella natans nucleomorph ... 130 3e-29
AY347864_1(AY347864|pid:none) Malus x domestica clone 12-1 small... 130 3e-29
(P38543) RecName: Full=GTP-binding nuclear protein Ran; AltName:... 129 6e-29
DQ206546_1(DQ206546|pid:none) Leucosolenia sp. AR-2003 isolate T... 128 1e-28
AJ000287_1(AJ000287|pid:none) Neurospora crassa mRNA encoding GT... 127 3e-28
GN105835_1(GN105835|pid:none) Sequence 10616 from Patent WO20090... 126 4e-28
EU711047_1(EU711047|pid:none) Psetta maxima ras-related nuclear ... 123 4e-27
AB088093_1(AB088093|pid:none) Homo sapiens TC4 gene for RAN, com... 120 2e-26
AF525487_1(AF525487|pid:none) Sus scrofa Ran mRNA, partial cds. 119 6e-26
AF112244_1(AF112244|pid:none) Zea mays Ran-related GTP binding p... 118 1e-25
CR932518_1(CR932518|pid:none) Paramecium tetraurelia, Small GTPa... 103 3e-21
AL049655_18(AL049655|pid:none) Arabidopsis thaliana DNA chromoso... 103 5e-21
AB186368_1(AB186368|pid:none) Entamoeba histolytica EhRAB7G gene... 103 5e-21
AK316975_1(AK316975|pid:none) Arabidopsis thaliana AT3G54840 mRN... 103 5e-21
AB007766_1(AB007766|pid:none) Arabidopsis thaliana mRNA for Ara6... 103 5e-21
BT077156_1(BT077156|pid:none) Caligus rogercresseyi clone crog-e... 102 6e-21
U66216_1(U66216|pid:none) Caenorhabditis elegans GTP-binding nuc... 102 6e-21
CR932543_1(CR932543|pid:none) Paramecium tetraurelia, Small GTPa... 102 8e-21
AB197100_1(AB197100|pid:none) Entamoeba histolytica gene for sma... 102 8e-21
GN106017_1(GN106017|pid:none) Sequence 10798 from Patent WO20090... 102 1e-20
CR932510_1(CR932510|pid:none) Paramecium tetraurelia, Small GTPa... 101 1e-20
CR933396_1(CR933396|pid:none) Paramecium tetraurelia, Small GTPa... 101 2e-20
Z73939_1(Z73939|pid:none) L.japonicus mRNA for small GTP-binding... 100 2e-20
AY061826_1(AY061826|pid:none) Drosophila melanogaster GH21984 fu... 100 3e-20
(Q9VP48) RecName: Full=Ras-related protein Rab-26; &AE014296_37... 100 3e-20
AC155344_30(AC155344|pid:none) Brassica rapa subsp. pekinensis c... 100 3e-20
AJ006225_1(AJ006225|pid:none) Mesembryanthemum crystallinum mRNA... 100 3e-20
CR933425_1(CR933425|pid:none) Paramecium tetraurelia, Small GTPa... 100 3e-20
AM438790_1(AM438790|pid:none) Vitis vinifera contig VV78X074483.... 100 4e-20
DQ019040_1(DQ019040|pid:none) Trichomonas vaginalis strain G3 sm... 100 4e-20
AJ296336_1(AJ296336|pid:none) Cichorium intybus X Cichorium endi... 100 5e-20
BT051367_1(BT051367|pid:none) Medicago truncatula clone MTYF1_F2... 100 5e-20
(P31583) RecName: Full=Ras-related protein RHN1; &S20445(S20445... 100 5e-20
CR932709_2(CR932709|pid:none) Paramecium tetraurelia, Small GTPa... 100 5e-20
CT005269_52(CT005269|pid:none) Leishmania major strain Friedlin,... 100 5e-20
AB241248_1(AB241248|pid:none) Symbiotic protist of Reticuliterme... 99 7e-20
AJ810707_1(AJ810707|pid:none) Poa pratensis mRNA for RAB1-like (... 99 7e-20
CR933460_1(CR933460|pid:none) Paramecium tetraurelia, Small GTPa... 99 9e-20
AC155101_11(AC155101|pid:none) Medicago truncatula clone mth2-13... 99 9e-20
DQ019046_1(DQ019046|pid:none) Trichomonas vaginalis strain G3 sm... 99 9e-20
S49225(S49225) guanine nucleotide regulatory protein - fava bean... 99 9e-20
D12548_1(D12548|pid:none) Pisum sativum mRNA for GTP-binding pro... 99 1e-19
AB379971_1(AB379971|pid:none) Physcomitrella patens subsp. paten... 99 1e-19
BT077488_1(BT077488|pid:none) Lepeophtheirus salmonis Pacific fo... 99 1e-19
EF144757_1(EF144757|pid:none) Populus trichocarpa clone WS01117_... 99 1e-19
BC135348_1(BC135348|pid:none) Xenopus tropicalis RAB3B, member R... 98 1e-19
CR548612_89(CR548612|pid:none) Paramecium tetraurelia macronucle... 98 1e-19
AJ296335_1(AJ296335|pid:none) Cichorium intybus X Cichorium endi... 98 1e-19
CR932619_1(CR932619|pid:none) Paramecium tetraurelia, Small GTPa... 98 1e-19
AB379973_1(AB379973|pid:none) Physcomitrella patens subsp. paten... 98 1e-19
DQ335217_1(DQ335217|pid:none) Nicotiana tabacum small GTPase Rab... 98 1e-19
AJ851582_1(AJ851582|pid:none) Gallus gallus mRNA for hypothetica... 98 2e-19
BC087498_1(BC087498|pid:none) Xenopus laevis hypothetical LOC496... 98 2e-19
BC082421_1(BC082421|pid:none) Xenopus laevis hypothetical LOC494... 98 2e-19
AB379972_1(AB379972|pid:none) Physcomitrella patens subsp. paten... 98 2e-19
AB241247_1(AB241247|pid:none) Symbiotic protist of Reticuliterme... 98 2e-19
(P31582) RecName: Full=Ras-related protein RHA1; &AB019224_14(A... 98 2e-19
(P22129) RecName: Full=Ras-related protein Rab-11B; AltName: Ful... 98 2e-19
GN106083_1(GN106083|pid:none) Sequence 10864 from Patent WO20090... 98 2e-19
BC152630_1(BC152630|pid:none) Danio rerio zgc:92772, mRNA (cDNA ... 98 2e-19
CR932514_1(CR932514|pid:none) Paramecium tetraurelia, Small GTPa... 98 2e-19
BC075268_1(BC075268|pid:none) Xenopus tropicalis RAB11B, member ... 98 2e-19
GN106041_1(GN106041|pid:none) Sequence 10822 from Patent WO20090... 98 2e-19
AB032761_1(AB032761|pid:none) Oryza sativa Japonica Group rab5B ... 98 2e-19
GN105977_1(GN105977|pid:none) Sequence 10758 from Patent WO20090... 98 2e-19
BC076247_1(BC076247|pid:none) Danio rerio zgc:92772, mRNA (cDNA ... 98 2e-19
BT049157_1(BT049157|pid:none) Salmo salar clone ssal-rgb2-591-24... 98 2e-19
CR932678_1(CR932678|pid:none) Paramecium tetraurelia, Small GTPa... 97 2e-19
BC072859_1(BC072859|pid:none) Xenopus laevis RAB9A, member RAS o... 97 2e-19
CS559708_1(CS559708|pid:none) Sequence 295 from Patent WO2006032... 97 3e-19
BT034664_1(BT034664|pid:none) Zea mays full-length cDNA clone ZM... 97 3e-19
AY324134_1(AY324134|pid:none) Babesia bovis Rab1a mRNA, complete... 97 3e-19
AM910992_200(AM910992|pid:none) Plasmodium knowlesi strain H chr... 97 3e-19
BT043301_1(BT043301|pid:none) Zea mays full-length cDNA clone ZM... 97 3e-19
BT039522_1(BT039522|pid:none) Zea mays full-length cDNA clone ZM... 97 3e-19
CS560060_1(CS560060|pid:none) Sequence 647 from Patent WO2006032... 97 3e-19
AF003139_1(AF003139|pid:none) Caenorhabditis elegans cosmid F53G... 97 3e-19
CS560194_1(CS560194|pid:none) Sequence 781 from Patent WO2006032... 97 3e-19
AM494969_60(AM494969|pid:none) Leishmania braziliensis chromosom... 97 3e-19
AY220748_1(AY220748|pid:none) Limulus polyphemus Rab11-1c mRNA, ... 97 3e-19
AY896247_1(AY896247|pid:none) Trichomonas vaginalis strain G3 sm... 97 3e-19
AY220749_1(AY220749|pid:none) Limulus polyphemus Rab11-1a mRNA, ... 97 3e-19
GN106197_1(GN106197|pid:none) Sequence 10978 from Patent WO20090... 97 3e-19
BT045814_1(BT045814|pid:none) Salmo salar clone ssal-rgf-532-060... 97 3e-19
BC123543_1(BC123543|pid:none) Bos taurus RAB9A, member RAS oncog... 97 4e-19
AM920437_2206(AM920437|pid:none) Penicillium chrysogenum Wiscons... 97 4e-19
AL672174_5(AL672174|pid:none) Mouse DNA sequence from clone RP23... 97 4e-19
(Q39572) RecName: Full=Ras-related protein YPTC6; &JC4108(JC410... 97 4e-19
AJ296334_1(AJ296334|pid:none) Cichorium intybus X Cichorium endi... 97 4e-19
BC123091_1(BC123091|pid:none) Xenopus tropicalis RAB9A, member R... 97 4e-19
BC048889_1(BC048889|pid:none) Danio rerio RAB11B, member RAS onc... 97 4e-19
CU638743_340(CU638743|pid:none) Podospora anserina genomic DNA c... 97 4e-19
BT039809_1(BT039809|pid:none) Zea mays full-length cDNA clone ZM... 97 4e-19
Z73932_1(Z73932|pid:none) L.japonicus mRNA for small GTP-binding... 97 4e-19
BC041250_1(BC041250|pid:none) Xenopus laevis RAB11B, member RAS ... 97 4e-19
(P40392) RecName: Full=Ras-related protein RIC1; &AK243597_1(AK... 96 6e-19
AJ307662_21(AJ307662|pid:none) Oryza sativa genomic DNA fragment... 96 6e-19
AF325692_1(AF325692|pid:none) Rattus norvegicus strain Sprague-D... 96 6e-19
AK059888_1(AK059888|pid:none) Oryza sativa Japonica Group cDNA c... 96 6e-19
AF323991_1(AF323991|pid:none) Oryza sativa small GTP-binding pro... 96 6e-19
GN106155_1(GN106155|pid:none) Sequence 10936 from Patent WO20090... 96 6e-19
(Q9R0M6) RecName: Full=Ras-related protein Rab-9A; Shor... 96 6e-19
EF148276_1(EF148276|pid:none) Populus trichocarpa x Populus delt... 96 6e-19
EF145603_1(EF145603|pid:none) Populus trichocarpa clone WS01126_... 96 6e-19
DQ414564_1(DQ414564|pid:none) Suberites domuncula Rab11 gene, co... 96 6e-19
AJ437656_1(AJ437656|pid:none) Simmondsia chinensis mRNA for Rab-... 96 6e-19
BC074481_1(BC074481|pid:none) Xenopus laevis MGC84786 protein, m... 96 6e-19
(Q99P75) RecName: Full=Ras-related protein Rab-9A; Shor... 96 6e-19
AB197059_1(AB197059|pid:none) Entamoeba histolytica gene for sma... 96 6e-19
BT076853_1(BT076853|pid:none) Caligus rogercresseyi clone crog-e... 96 6e-19
GN106117_1(GN106117|pid:none) Sequence 10898 from Patent WO20090... 96 6e-19
BX649327_6(BX649327|pid:none) Zebrafish DNA sequence from clone ... 96 6e-19
AP008208_2028(AP008208|pid:none) Oryza sativa (japonica cultivar... 96 6e-19
(Q2TA29) RecName: Full=Ras-related protein Rab-11A; &BC111143_1... 96 7e-19
CR382138_325(CR382138|pid:none) Debaryomyces hansenii strain CBS... 96 7e-19
EU090128_1(EU090128|pid:none) Aiptasia pulchella Rab3 mRNA, comp... 96 7e-19
CR932686_1(CR932686|pid:none) Paramecium tetraurelia, Small GTPa... 96 7e-19
GN106179_1(GN106179|pid:none) Sequence 10960 from Patent WO20090... 96 7e-19
EU244432_1(EU244432|pid:none) Capra hircus RAB11B (rab11b) mRNA,... 96 7e-19
AB169492_1(AB169492|pid:none) Macaca fascicularis brain cDNA, cl... 96 7e-19
AY894025_1(AY894025|pid:none) Synthetic construct Homo sapiens c... 96 7e-19
BT064369_1(BT064369|pid:none) Zea mays full-length cDNA clone ZM... 96 7e-19
GN106077_1(GN106077|pid:none) Sequence 10858 from Patent WO20090... 96 7e-19
CR382130_329(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 96 7e-19
EF560724_1(EF560724|pid:none) Homo sapiens clone DKFZp564C1023 R... 96 7e-19
(P46638) RecName: Full=Ras-related protein Rab-11B; &A55005(A55... 96 7e-19
AY815411_1(AY815411|pid:none) Schistosoma japonicum SJCHGC06676 ... 96 7e-19
AC183496_25(AC183496|pid:none) Brassica oleracea, *** SEQUENCING... 96 7e-19
EF146669_1(EF146669|pid:none) Populus trichocarpa clone WS01211_... 96 7e-19
EU069501_1(EU069501|pid:none) Gymnochlora stellata Rab1A1 mRNA, ... 96 7e-19
EF086613_1(EF086613|pid:none) Picea sitchensis clone WS02920_I20... 96 7e-19
AJ719399_1(AJ719399|pid:none) Gallus gallus mRNA for hypothetica... 96 7e-19
AK297498_1(AK297498|pid:none) Homo sapiens cDNA FLJ61134 complet... 96 7e-19
AK300008_1(AK300008|pid:none) Homo sapiens cDNA FLJ51542 complet... 96 7e-19
EF144402_1(EF144402|pid:none) Populus trichocarpa clone PX0019_E... 96 7e-19
BC097569_1(BC097569|pid:none) Xenopus laevis hypothetical protei... 96 7e-19
CR541691_1(CR541691|pid:none) Homo sapiens full open reading fra... 96 7e-19
AM269968_23(AM269968|pid:none) Aspergillus niger contig An01c021... 96 7e-19
AF127669_1(AF127669|pid:none) Mus musculus small GTPase (Rab11a)... 96 7e-19
GN106151_1(GN106151|pid:none) Sequence 10932 from Patent WO20090... 96 7e-19
GN106115_1(GN106115|pid:none) Sequence 10896 from Patent WO20090... 96 7e-19
CR536494_1(CR536494|pid:none) Homo sapiens full open reading fra... 96 7e-19
(O35509) RecName: Full=Ras-related protein Rab-11B; &(Q15907) R... 96 7e-19
BT068335_1(BT068335|pid:none) Zea mays full-length cDNA clone ZM... 96 9e-19
AC124143_12(AC124143|pid:none) Oryza sativa (japonica cultivar-g... 96 9e-19
CR932581_1(CR932581|pid:none) Paramecium tetraurelia, Small GTPa... 96 9e-19
AY220456_1(AY220456|pid:none) Limulus polyphemus rab11-2 mRNA, c... 96 9e-19
EF145933_1(EF145933|pid:none) Populus trichocarpa clone WS0114_G... 96 9e-19
BC081187_1(BC081187|pid:none) Xenopus laevis MGC84419 protein, m... 96 9e-19
AF093826_1(AF093826|pid:none) Plasmodium berghei GTP binding pro... 96 9e-19
BT037200_1(BT037200|pid:none) Zea mays full-length cDNA clone ZM... 95 1e-18
BT043430_1(BT043430|pid:none) Zea mays full-length cDNA clone ZM... 95 1e-18
AB172492_1(AB172492|pid:none) Macaca fascicularis brain cDNA clo... 95 1e-18
(Q39571) RecName: Full=GTP-binding protein YPTC1; &DQ222936_1(D... 95 1e-18
(Q9D1G1) RecName: Full=Ras-related protein Rab-1B; &AB232584_1(... 95 1e-18
EU284879_1(EU284879|pid:none) TSA: Elaeis guineensis EgEfMPOB000... 95 1e-18
GN080031_1(GN080031|pid:none) Sequence 634 from Patent WO2009027... 95 1e-18
GN105939_1(GN105939|pid:none) Sequence 10720 from Patent WO20090... 95 1e-18
GN106165_1(GN106165|pid:none) Sequence 10946 from Patent WO20090... 95 1e-18
T21442(T21442) hypothetical protein F26H9.6 - Caenorhabditis ele... 95 1e-18
GN105983_1(GN105983|pid:none) Sequence 10764 from Patent WO20090... 95 1e-18
(Q55FK2) RecName: Full=Ras-related protein Rab-6; 95 1e-18
GN106013_1(GN106013|pid:none) Sequence 10794 from Patent WO20090... 95 1e-18
JC5066(JC5066) GTP-binding protein rab 3C - rat &U54807_1(U5480... 95 1e-18
AB035354_1(AB035354|pid:none) Drosophila melanogaster mRNA for D... 95 1e-18
GN105997_1(GN105997|pid:none) Sequence 10778 from Patent WO20090... 95 1e-18
(Q2HJH2) RecName: Full=Ras-related protein Rab-1B; &BC105393_1(... 95 1e-18
CR933453_1(CR933453|pid:none) Paramecium tetraurelia, Small GTPa... 95 1e-18
GN106039_1(GN106039|pid:none) Sequence 10820 from Patent WO20090... 95 1e-18
AC183493_34(AC183493|pid:none) Brassica oleracea Contig B, compl... 95 1e-18
GN106051_1(GN106051|pid:none) Sequence 10832 from Patent WO20090... 95 1e-18
AK151085_1(AK151085|pid:none) Mus musculus bone marrow macrophag... 95 1e-18
(Q8BHH2) RecName: Full=Ras-related protein Rab-9B; &AB232603_1(... 95 1e-18
CR933405_1(CR933405|pid:none) Paramecium tetraurelia, Small GTPa... 95 1e-18
(Q5RE13) RecName: Full=Ras-related protein Rab-1B; &(Q9H0U4) Re... 95 1e-18
BT074063_1(BT074063|pid:none) Oncorhynchus mykiss clone omyk-evo... 95 1e-18
BC098510_1(BC098510|pid:none) Xenopus tropicalis RAB23, member R... 95 1e-18
BT001785_1(BT001785|pid:none) Drosophila melanogaster RH21315 fu... 95 1e-18
BT070553_1(BT070553|pid:none) Picea sitchensis clone WS02735_N04... 95 1e-18
AY725788_1(AY725788|pid:none) Oncometopia nigricans putative Rab... 95 1e-18
M19885_1(M19885|pid:none) Bovine GTP-binding protein (smg p25A) ... 95 2e-18
DQ414556_1(DQ414556|pid:none) Suberites domuncula Rab1 gene, com... 95 2e-18
BC106308_1(BC106308|pid:none) Xenopus laevis similar to RAB3D, m... 95 2e-18
AL590443_139(AL590443|pid:none) chromosome III of strain GB-M1 o... 95 2e-18
CR933439_1(CR933439|pid:none) Paramecium tetraurelia, Small GTPa... 95 2e-18
GN106021_1(GN106021|pid:none) Sequence 10802 from Patent WO20090... 95 2e-18
GN105857_1(GN105857|pid:none) Sequence 10638 from Patent WO20090... 95 2e-18
BC097013_1(BC097013|pid:none) Danio rerio zgc:86773, mRNA (cDNA ... 95 2e-18
(P10536) RecName: Full=Ras-related protein Rab-1B; &X13905_1(X1... 95 2e-18
BT039216_1(BT039216|pid:none) Zea mays full-length cDNA clone ZM... 95 2e-18
Z73956_1(Z73956|pid:none) L.japonicus mRNA for small GTP-binding... 95 2e-18
AM459225_1(AM459225|pid:none) Vitis vinifera contig VV78X087264.... 95 2e-18
CR933472_1(CR933472|pid:none) Paramecium tetraurelia, Small GTPa... 95 2e-18
(P25228) RecName: Full=Ras-related protein Rab-3; &AB112932_1(A... 95 2e-18
CP000499_197(CP000499|pid:none) Pichia stipitis CBS 6054 chromos... 95 2e-18
BX901942_5(BX901942|pid:none) Zebrafish DNA sequence from clone ... 95 2e-18
JC2487(JC2487) GTP-binding protein H-YPT3 - human &X79780_1(X79... 95 2e-18
BC043857_1(BC043857|pid:none) Xenopus laevis similar to RAB3D, m... 95 2e-18
CR933468_1(CR933468|pid:none) Paramecium tetraurelia, Small GTPa... 95 2e-18
L29273_1(L29273|pid:none) Nicotiana tabacum SR1 Nt-rab6 mRNA, co... 95 2e-18
BX901942_4(BX901942|pid:none) Zebrafish DNA sequence from clone ... 95 2e-18
(P36412) RecName: Full=Ras-related protein Rab-11A; &U02925_1(U... 95 2e-18
AY060495_1(AY060495|pid:none) Arabidopsis thaliana AT4g17530/dl4... 95 2e-18
BC170902_1(BC170902|pid:none) Xenopus tropicalis RAB21, member R... 95 2e-18
AY892948_1(AY892948|pid:none) Synthetic construct Homo sapiens c... 95 2e-18
(P51151) RecName: Full=Ras-related protein Rab-9A; Shor... 95 2e-18
CR940347_597(CR940347|pid:none) Theileria annulata strain Ankara... 95 2e-18
(Q96E17) RecName: Full=Ras-related protein Rab-3C; &AY026936_1(... 95 2e-18
(P24408) RecName: Full=Ras-related protein Rab-9A; Shor... 95 2e-18
BT059706_1(BT059706|pid:none) Salmo salar clone ssal-rgf-522-243... 95 2e-18
(Q40520) RecName: Full=Ras-related protein Rab11C; &L29268_1(L2... 95 2e-18
FN357538_13(FN357538|pid:none) Schistosoma mansoni genome sequen... 95 2e-18
AY585950_1(AY585950|pid:none) Paxillus involutus strain ATCC 200... 95 2e-18
S51495(S51495;S70850)GTP-binding protein RYL1 - yeast (Yarrowia ... 95 2e-18
EU365391_1(EU365391|pid:none) Euplotes octocarinatus Rab GTPase ... 95 2e-18
BT056265_1(BT056265|pid:none) Drosophila melanogaster FI09227 fu... 95 2e-18
AL606522_3(AL606522|pid:none) Mouse DNA sequence from clone RP23... 94 2e-18
AK042020_1(AK042020|pid:none) Mus musculus 3 days neonate thymus... 94 2e-18
GM977117_1(GM977117|pid:none) Sequence 25 from Patent WO20081456... 94 2e-18
DQ214474_1(DQ214474|pid:none) Taeniopygia guttata clone 0063P003... 94 2e-18
EF084401_1(EF084401|pid:none) Picea sitchensis clone WS02712_B09... 94 2e-18
BC066913_1(BC066913|pid:none) Homo sapiens RAB26, member RAS onc... 94 2e-18
FN392321_231(FN392321|pid:none) Pichia pastoris GS115 chromosome... 94 2e-18
J02998_1(J02998|pid:none) Rat ras-related protein mRNA, clone NT... 94 2e-18
BT023070_1(BT023070|pid:none) Drosophila melanogaster IP08619 fu... 94 2e-18
(P22125) RecName: Full=Ras-related protein ORAB-1; &M38393_1(M3... 94 2e-18
EU954271_1(EU954271|pid:none) Zea mays clone 1460642 ras-related... 94 2e-18
BC150404_1(BC150404|pid:none) Danio rerio zgc:171927, mRNA (cDNA... 94 2e-18
CR932504_1(CR932504|pid:none) Paramecium tetraurelia, Small GTPa... 94 2e-18
BT057068_1(BT057068|pid:none) Salmo salar clone ssal-eve-570-039... 94 2e-18
AL670003_2(AL670003|pid:none) Neurospora crassa DNA linkage grou... 94 2e-18
CR933456_1(CR933456|pid:none) Paramecium tetraurelia, Small GTPa... 94 2e-18
CR933450_1(CR933450|pid:none) Paramecium tetraurelia, Small GTPa... 94 2e-18
EU176872_1(EU176872|pid:none) Gallus gallus Rab23 GTPase (Rab23)... 94 2e-18
(Q9ULW5) RecName: Full=Ras-related protein Rab-26; &AY646153_1(... 94 2e-18
AF458973_1(AF458973|pid:none) Saccharomyces cerevisiae strain YJ... 94 2e-18
AB470307_1(AB470307|pid:none) Nicotiana tabacum NtRab11D mRNA fo... 94 2e-18
AB079024_1(AB079024|pid:none) Nicotiana tabacum mRNA for ras-rel... 94 2e-18
GN106091_1(GN106091|pid:none) Sequence 10872 from Patent WO20090... 94 2e-18
EF103367_1(EF103367|pid:none) Haliotis discus discus Ras-related... 94 2e-18
BT059700_1(BT059700|pid:none) Salmo salar clone ssal-rgf-002-342... 94 2e-18
S57478(S57478) GTP-binding protein GTP13 - garden pea &Z49902_1... 94 2e-18
BT077510_1(BT077510|pid:none) Lepeophtheirus salmonis Pacific fo... 94 2e-18
GN106033_1(GN106033|pid:none) Sequence 10814 from Patent WO20090... 94 2e-18
BC045014_1(BC045014|pid:none) Xenopus laevis RAB1, member RAS on... 94 2e-18
(P62820) RecName: Full=Ras-related protein Rab-1A; AltName: Full... 94 2e-18
EU162609_23(EU162609|pid:none) Cleome spinosa clone contig83 BAC... 94 3e-18
AY088624_1(AY088624|pid:none) Arabidopsis thaliana clone 8545 mR... 94 3e-18
BC135626_1(BC135626|pid:none) Xenopus tropicalis RAB3A, member R... 94 3e-18
AF324990_1(AF324990|pid:none) Arabidopsis thaliana AT5g47200 (AT... 94 3e-18
(Q17R06) RecName: Full=Ras-related protein Rab-21; &BC118088_1(... 94 3e-18
AK172891_1(AK172891|pid:none) Mus musculus mRNA for mKIAA0118 pr... 94 3e-18
CR933401_1(CR933401|pid:none) Paramecium tetraurelia, Small GTPa... 94 3e-18
DQ641101_1(DQ641101|pid:none) Cucumis sativus clone CU3B2 small ... 94 3e-18
CR933429_1(CR933429|pid:none) Paramecium tetraurelia, Small GTPa... 94 3e-18
(P11023) RecName: Full=Ras-related protein Rab-3A; AltName: Full... 94 3e-18
(P35282) RecName: Full=Ras-related protein Rab-21; AltName: Full... 94 3e-18
FJ943982_1(FJ943982|pid:none) Ovis aries RAB21 mRNA, complete cds. 94 3e-18
(P36019) RecName: Full=GTP-binding protein YPT53; &AF458969_1(A... 94 3e-18
BC057747_1(BC057747|pid:none) Xenopus laevis hypothetical protei... 94 3e-18
AL035708_16(AL035708|pid:none) Arabidopsis thaliana DNA chromoso... 94 3e-18
GN106111_1(GN106111|pid:none) Sequence 10892 from Patent WO20090... 94 3e-18
CR533462_1(CR533462|pid:none) Homo sapiens full open reading fra... 94 3e-18
BT051484_1(BT051484|pid:none) Medicago truncatula clone MTYF1_F2... 94 3e-18
AF254795_1(AF254795|pid:none) Homo sapiens GTP-binding protein R... 94 3e-18
(Q52NJ2) RecName: Full=Ras-related protein Rab-1A; &AY996813_1(... 94 3e-18
AB013395_22(AB013395|pid:none) Arabidopsis thaliana genomic DNA,... 94 3e-18
BC055141_1(BC055141|pid:none) Danio rerio zgc:63565, mRNA (cDNA ... 94 3e-18
(Q5R4W9) RecName: Full=Ras-related protein Rab-9B; &CR861121_1(... 94 3e-18
(Q05974) RecName: Full=Ras-related protein Rab-1A; &S38339(S383... 94 3e-18
AB197103_1(AB197103|pid:none) Entamoeba histolytica gene for sma... 94 3e-18
PDBN(3RAB)A MOL_ID: 1;MOL_ID: 1; MOLECULE: RAB3A; MOLECULE: RAB3... 94 3e-18
FN392322_159(FN392322|pid:none) Pichia pastoris GS115 chromosome... 94 3e-18
S01765(S01765;C39963) GTP-binding protein rab3 - rat &X06889_1(... 94 3e-18
CR932553_1(CR932553|pid:none) Paramecium tetraurelia, Small GTPa... 94 3e-18
AB232594_1(AB232594|pid:none) Mus musculus mRNA for Rab5B, compl... 94 3e-18
AM432734_2(AM432734|pid:none) Vitis vinifera contig VV78X219500.... 94 3e-18
U46926_1(U46926|pid:none) Arabidopsis thaliana GTP-binding prote... 94 3e-18
(Q01111) RecName: Full=Ras-related protein YPT3; &S23523(S23523... 94 3e-18
AJ237914_1(AJ237914|pid:none) Plasmodium falciparum putative rab... 94 4e-18
GN106009_1(GN106009|pid:none) Sequence 10790 from Patent WO20090... 94 4e-18
AC117265_12(AC117265|pid:none) Oryza sativa (japonica cultivar-g... 94 4e-18
GM977153_1(GM977153|pid:none) Sequence 61 from Patent WO20081456... 94 4e-18
(P55745) RecName: Full=Ras-related protein Rab-21; 94 4e-18
CR954208_252(CR954208|pid:none) Ostreococcus tauri strain OTTH05... 94 4e-18
GM977149_1(GM977149|pid:none) Sequence 57 from Patent WO20081456... 94 4e-18
AF169950_1(AF169950|pid:none) Tetrahymena thermophila putative i... 94 4e-18
AC140549_17(AC140549|pid:none) Medicago truncatula clone mth2-28... 94 4e-18
X92977_1(X92977|pid:none) P.falciparum mRNA for rab6 GTPase prot... 94 4e-18
GN105943_1(GN105943|pid:none) Sequence 10724 from Patent WO20090... 94 4e-18
AJ001367_1(AJ001367|pid:none) Daucus carota mRNA for Rab8-like s... 94 4e-18
(O14462) RecName: Full=Ras-related protein SEC4; &AF015306_1(AF... 94 4e-18
AF201953_1(AF201953|pid:none) Plasmodium falciparum isolate FCC1... 94 4e-18
DQ157704_1(DQ157704|pid:none) Aiptasia pulchella Rab11 protein m... 94 4e-18
(Q504M8) RecName: Full=Ras-related protein Rab-26; &AB232621_1(... 94 4e-18
AK071461_1(AK071461|pid:none) Oryza sativa Japonica Group cDNA c... 94 4e-18
BT059766_1(BT059766|pid:none) Salmo salar clone ssal-rgf-510-347... 94 4e-18
(Q39434) RecName: Full=Ras-related protein Rab2BV; &T14566(T145... 94 4e-18
BT035344_1(BT035344|pid:none) Zea mays full-length cDNA clone ZM... 94 4e-18
(Q92928) RecName: Full=Putative Ras-related protein Rab-1C; ... 94 4e-18
U41269_1(U41269|pid:none) Plasmodium falciparum Rab1 protein (Pf... 94 4e-18
GM977111_1(GM977111|pid:none) Sequence 19 from Patent WO20081456... 94 4e-18
GN106011_1(GN106011|pid:none) Sequence 10792 from Patent WO20090... 94 4e-18
AB025628_11(AB025628|pid:none) Arabidopsis thaliana genomic DNA,... 94 4e-18
AB038491_1(AB038491|pid:none) Arabidopsis thaliana mRNA for Ara7... 94 4e-18
AP008215_340(AP008215|pid:none) Oryza sativa (japonica cultivar-... 94 4e-18
(Q40523) RecName: Full=Ras-related protein Rab11A; &L29271_1(L2... 94 4e-18
AB079020_1(AB079020|pid:none) Nicotiana tabacum mRNA for ras-rel... 94 4e-18
AC084818_20(AC084818|pid:none) Oryza sativa (japonica cultivar-g... 94 4e-18
AB016890_5(AB016890|pid:none) Arabidopsis thaliana genomic DNA, ... 94 4e-18
GM977141_1(GM977141|pid:none) Sequence 49 from Patent WO20081456... 94 4e-18
GN106049_1(GN106049|pid:none) Sequence 10830 from Patent WO20090... 94 4e-18
AE014296_1491(AE014296|pid:none) Drosophila melanogaster chromos... 94 4e-18
AC125368_16(AC125368|pid:none) Medicago truncatula clone mth2-13... 94 4e-18
GM977161_1(GM977161|pid:none) Sequence 69 from Patent WO20081456... 94 4e-18
AB015472_10(AB015472|pid:none) Arabidopsis thaliana genomic DNA,... 94 4e-18
EF144772_1(EF144772|pid:none) Populus trichocarpa clone WS01118_... 94 4e-18
AB015475_6(AB015475|pid:none) Arabidopsis thaliana genomic DNA, ... 94 4e-18
S06147(S06147;S03189)GTP-binding protein rab1B - rat 94 4e-18
FN359283_3(FN359283|pid:none) Schistosoma mansoni genome sequenc... 94 4e-18
AY576526_1(AY576526|pid:none) Oryza sativa (japonica cultivar-gr... 93 5e-18
CR954204_191(CR954204|pid:none) Ostreococcus tauri strain OTTH05... 93 5e-18
CR380957_399(CR380957|pid:none) Candida glabrata strain CBS138 c... 93 5e-18
BT033632_1(BT033632|pid:none) Zea mays full-length cDNA clone ZM... 93 5e-18
GN106085_1(GN106085|pid:none) Sequence 10866 from Patent WO20090... 93 5e-18
(P34139) RecName: Full=Ras-related protein Rab-1A; 93 5e-18
CR762386_2(CR762386|pid:none) Zebrafish DNA sequence from clone ... 93 5e-18
DQ019037_1(DQ019037|pid:none) Trichomonas vaginalis strain G3 sm... 93 5e-18
CR954205_238(CR954205|pid:none) Ostreococcus tauri strain OTTH05... 93 5e-18
AF389109_1(AF389109|pid:none) Entamoeba histolytica small GTP-bi... 93 5e-18
CR932579_1(CR932579|pid:none) Paramecium tetraurelia, Small GTPa... 93 5e-18
GN106065_1(GN106065|pid:none) Sequence 10846 from Patent WO20090... 93 5e-18
(Q39222) RecName: Full=Ras-related protein RABA1b; AltName: Full... 93 5e-18
Y08425_1(Y08425|pid:none) N.plumbaginifolia mRNA for small GTP-b... 93 5e-18
BT064711_1(BT064711|pid:none) Zea mays full-length cDNA clone ZM... 93 5e-18
AL021710_9(AL021710|pid:none) Arabidopsis thaliana DNA chromosom... 93 5e-18
BC075188_1(BC075188|pid:none) Xenopus laevis MGC82152 protein, m... 93 5e-18
AC183498_22(AC183498|pid:none) Brassica oleracea, *** SEQUENCING... 93 5e-18
EF091876_1(EF091876|pid:none) Solanum tuberosum ras-related GTP ... 93 5e-18
EF144948_1(EF144948|pid:none) Populus trichocarpa clone WS0111_B... 93 5e-18
AY690483_1(AY690483|pid:none) Triticum aestivum rab GTP-binding ... 93 5e-18
AM494964_85(AM494964|pid:none) Leishmania braziliensis chromosom... 93 5e-18
AF363067_1(AF363067|pid:none) Entamoeba histolytica small GTP-bi... 93 5e-18
(Q40194) RecName: Full=Ras-related protein Rab11D; &Z73952_1(Z7... 93 5e-18
BC082662_1(BC082662|pid:none) Xenopus laevis hypothetical LOC494... 93 5e-18
CR380949_94(CR380949|pid:none) Candida glabrata strain CBS138 ch... 93 5e-18
AB482179_1(AB482179|pid:none) Babesia bigemina Rab11 mRNA for sm... 93 5e-18
BC041759_1(BC041759|pid:none) Xenopus laevis similar to RAB35, m... 93 6e-18
AK046260_1(AK046260|pid:none) Mus musculus adult male corpora qu... 93 6e-18
A43958(A43958;C43958) GTP-binding protein, synaptic vesicle spec... 93 6e-18
AY321151_1(AY321151|pid:none) Aiptasia pulchella Rab7 mRNA, comp... 93 6e-18
AB241229_1(AB241229|pid:none) Pyrsonympha grandis RsSmRab11_1 mR... 93 6e-18
AF108883_1(AF108883|pid:none) Capsicum annuum small GTP-binding ... 93 6e-18
AB035353_1(AB035353|pid:none) Drosophila melanogaster mRNA for D... 93 6e-18
CR932613_1(CR932613|pid:none) Paramecium tetraurelia, Small GTPa... 93 6e-18
BC074589_1(BC074589|pid:none) Xenopus tropicalis RAB3D, member R... 93 6e-18
AF228419_1(AF228419|pid:none) Toxoplasma gondii RAB6 protein (Ra... 93 6e-18
BT070586_1(BT070586|pid:none) Picea sitchensis clone WS02737_M21... 93 6e-18
(Q550H6) RecName: Full=Ras-related protein Rab-11C; 93 6e-18
BC068969_1(BC068969|pid:none) Xenopus laevis similar to RAB35, m... 93 6e-18
AY896261_1(AY896261|pid:none) Trichomonas vaginalis strain G3 sm... 93 6e-18
BC045466_1(BC045466|pid:none) Danio rerio RAB5C, member RAS onco... 93 6e-18
GM977157_1(GM977157|pid:none) Sequence 65 from Patent WO20081456... 93 6e-18
GN080131_1(GN080131|pid:none) Sequence 734 from Patent WO2009027... 93 6e-18
GN080099_1(GN080099|pid:none) Sequence 702 from Patent WO2009027... 93 6e-18
(P34140) RecName: Full=Ras-related protein Rab-1B; 93 6e-18
GN080009_1(GN080009|pid:none) Sequence 612 from Patent WO2009027... 93 6e-18
CR382134_161(CR382134|pid:none) Debaryomyces hansenii strain CBS... 93 6e-18
GN105859_1(GN105859|pid:none) Sequence 10640 from Patent WO20090... 93 6e-18
D12542_1(D12542|pid:none) Pisum sativum mRNA for GTP-binding pro... 93 6e-18
BC099268_1(BC099268|pid:none) Xenopus laevis similar to RAB35, m... 93 6e-18
AC138015_11(AC138015|pid:none) Medicago truncatula clone mth2-34... 92 8e-18
S41432(S41432)GTP-binding protein, ras-like (clone vfa-yptx) - f... 92 8e-18
AF183937_1(AF183937|pid:none) Giardia intestinalis guanine nucle... 92 8e-18
BT037150_1(BT037150|pid:none) Zea mays full-length cDNA clone ZM... 92 8e-18
CP001328_573(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 92 8e-18
AY893660_1(AY893660|pid:none) Synthetic construct Homo sapiens c... 92 8e-18
(Q53B90) RecName: Full=Ras-related protein Rab-43; &AY593256_1(... 92 8e-18
AK111561_1(AK111561|pid:none) Oryza sativa Japonica Group cDNA c... 92 8e-18
AY891536_1(AY891536|pid:none) Synthetic construct Homo sapiens c... 92 8e-18
BC124008_1(BC124008|pid:none) Xenopus tropicalis RAB9B, member R... 92 8e-18
(O95716) RecName: Full=Ras-related protein Rab-3D; &AF081353_1(... 92 8e-18
AJ851375_1(AJ851375|pid:none) Gallus gallus mRNA for hypothetica... 92 8e-18
BC165915_1(BC165915|pid:none) Danio rerio RAB5A, member RAS onco... 92 8e-18
(Q86YS6) RecName: Full=Ras-related protein Rab-43; AltName: Full... 92 8e-18
BC047803_1(BC047803|pid:none) Danio rerio RAB5A, member RAS onco... 92 8e-18
>AC116957_29(AC116957|pid:none) Dictyostelium discoideum chromosome
2 map 1685067-2090751 strain AX4, complete sequence.
Length = 719
Score = 324 bits (831), Expect = 1e-87
Identities = 162/180 (90%), Positives = 163/180 (90%)
Frame = +3
Query: 48 AELLSSYEKAIGEQIPIEDEDHSPIEQKAYQNIKPIDIKNGPIKLILVGDSGVGKTTFLK 227
+ELLSSYEKAIGEQIPIEDEDHSPIEQKAYQNIKPIDI TTFLK
Sbjct: 6 SELLSSYEKAIGEQIPIEDEDHSPIEQKAYQNIKPIDI-----------------TTFLK 48
Query: 228 RHIIGEFQKSHIPTVGVELSNLILYTNIGNVNFDIWDTCGDEKFEVFRHLYYVGSQCAII 407
RHIIGEFQKSHIPTVGVELSNLILYTNIGNVNFDIWDTCGDEKFEVFRHLYYVGSQCAII
Sbjct: 49 RHIIGEFQKSHIPTVGVELSNLILYTNIGNVNFDIWDTCGDEKFEVFRHLYYVGSQCAII 108
Query: 408 MFDVSSRVSYRNVPSWFNELTKELGNNIPIILVGNKVDIKDRKVKAKEINFHRSKNIHYC 587
MFDVSSRVSYRNVPSWFNELTKELGNNIPIILVGNKVDIKDRKVKAKEINFHRSKNIHYC
Sbjct: 109 MFDVSSRVSYRNVPSWFNELTKELGNNIPIILVGNKVDIKDRKVKAKEINFHRSKNIHYC 168
Score = 106 bits (265), Expect = 4e-22
Identities = 57/140 (40%), Positives = 77/140 (55%), Gaps = 3/140 (2%)
Frame = +3
Query: 174 IKLILVGDSGVGKTTFLKRHIIGEFQKSHIPTVGVELSNLILYTNIGNVNFDIWDTCGDE 353
IKL+L+GD GVGK+T++ R + GEF+ ++ T G + T IG+VNF IWD
Sbjct: 491 IKLVLIGDGGVGKSTYINRLLTGEFETQYVATFGCSVHKFNFKTTIGDVNFSIWDMAFTR 550
Query: 354 KFEVFRHLYYVGSQCAIIMFDVSSRVSYRNVPSWFNEL---TKELGNNIPIILVGNKVDI 524
R Y G++CAIIMFDV SR SYR+V W NEL T+ +G
Sbjct: 551 LPGAMRDDYMTGAECAIIMFDVCSRESYRSVNDWVNELLRITESMG-------------- 596
Query: 525 KDRKVKAKEINFHRSKNIHY 584
+++ +I FHR KNI Y
Sbjct: 597 --KRINPSQIIFHRKKNISY 614
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 864,499,098
Number of extensions: 17435133
Number of successful extensions: 80343
Number of sequences better than 10.0: 3879
Number of HSP's gapped: 78395
Number of HSP's successfully gapped: 3895
Length of query: 195
Length of database: 1,051,180,864
Length adjustment: 122
Effective length of query: 73
Effective length of database: 656,320,666
Effective search space: 47911408618
Effective search space used: 47911408618
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
2 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |