>Contig-U13509-1 (Contig-U13509-1Q) /CSM_Contig/Contig-U13509-1Q.Seq.d
CATTATTAACAAGTTCATTTTTAACAAAAAAAGGTGAAAATGATGATGAT
TCATCCGATGAAGATTCAAATAAAAAGAGAAAGAAAAAGAGAGAGTCATC
ATCATCATCATCAACATCTTCAAAACCATCATTATTCCCAACTACCTCTA
AAAAGGAAAAGATAGATGATAAACCATCTACAACCACCACCACCACCACA
ACATCATTATTTGGTTCGACAACTACCTCTGGTTTATTCTCTAATCCATC
AACAACATCAACTGGTTCATTATTTTCATCAAACCCACTTGGTTCAACAG
CTTCCACTTCTAGTTTATTTGGTGCCTCAACATTAGCTTCTACTGCTACT
ACTACAGCTACACCAACAACAAGCTTATTTGGCTCAACAACACCATCATC
ATCATCATCCTCATCATCATCATCCTCATCTACTACTTCAACAACCACAC
CATCAAACAGTTTATTTGGAACATCATCATCCTCCTCATCTACCTCTAGC
TCTTTATTTGGTAGCACCACTTCAGCAACAACACCATCAAGTTTATTTGG
AACAACAACAACATCATCTGACTCAAAATCTGAGACAAAAACAACTCCAT
CACTTTCTTCAGGAGGATTATTTAGTACAACATCAGCCTCACCATTTTCA
ATTCCATCTTCAACTTCATCCAGTGGTTTATTTGGGTCAACAAATCAAAC
TGAATCAAAGGTAGCTACTACCACAACTACAGCTGCAACAACTGCAACCC
CATCAACATCATTATTTGGTTCAACAACTACACCATCGACATCATCTTCA
ACATCATCTTTAACTACAACACCATCTACTGGATTGTTTGGTGCTTCATC
ATCTACAACCCCATCAACTGGATTATTTGGTTCCGCAACAACCCCATCAA
CTGGATTGTTTGGTGCTTCATCTTCATCATCATCATCATCAATATNATCA
TCTTCTACCACCTCAACAACCACCACACCATNAACTGGNTTATTTGGATC
AACAACACCATCAACNGGCTTATTT

est1=VHE278F,1,666
est2=VFK878F,456,1025

LLTSSFLTKKGENDDDSSDEDSNKKRKKKRESSSSSSTSSKPSLFPTTSKKEKIDDKPST
TTTTTTTSLFGSTTTSGLFSNPSTTSTGSLFSSNPLGSTASTSSLFGASTLASTATTTAT
PTTSLFGSTTPSSSSSSSSSSSSTTSTTTPSNSLFGTSSSSSSTSSSLFGSTTSATTPSS
LFGTTTTSSDSKSETKTTPSLSSGGLFSTTSASPFSIPSSTSSSGLFGSTNQTESKVATT
TTTAATTATPSTSLFGSTTTPSTSSSTSSLTTTPSTGLFGASSSTTPSTGLFGSATTPST
GLFGASSSSSSSSIXSSSTTSTTTTPXTGLFGSTTPSTGLF

Frame A:
hy*qvhf*qkkvkmmmihpmkiqikrerkreshhhhhqhlqnhhysqlplkrkr*minhl
qpppppqhhylvrqlplvyslihqqhqlvhyfhqthlvqqlpllvylvpqh*llllllql
hqqqaylaqqhhhhhhphhhhphlllqqphhqtvylehhhpphlplalylvaplqqqhhq
vyleqqqhhltqnlrqkqlhhflqedylvqhqphhfqfhlqlhpvvylgqqiklnqr*ll
pqlqlqqlqphqhhylvqqlhhrhhlqhhl*lqhhlldclvlhhlqphqldylvpqqphq
ldclvlhlhhhhhqyxhllppqqpphhxlxyldqqhhqxay


Frame B:
iinkfifnkkr*k***fir*rfk*kekekerviiiiinifktiiipnyl*kgkdr**tiy
nhhhhhniiiwfdnylwfil*sinninwfiifikptwfnsfhf*fiwclnisfycyyysy
tnnkliwlnntiiiiiliiiiliyyfnnhtikqfiwniiilliyl*lfiw*hhfsnntik
fiwnnnnii*lki*dknnsitffrrii*ynisltifnsifnfiqwfiwvnksn*ikgsyy
hnyscnncnpiniiiwfnnytidiifniifnyntiywivwcfiiynpinwiiwfrnnpin
wivwcfifiiiiinxiifyhlnnhhtxnwxiwinntinxli


Frame C:
LLTSSFLTKKGENDDDSSDEDSNKKRKKKRESSSSSSTSSKPSLFPTTSKKEKIDDKPST
TTTTTTTSLFGSTTTSGLFSNPSTTSTGSLFSSNPLGSTASTSSLFGASTLASTATTTAT
PTTSLFGSTTPSSSSSSSSSSSSTTSTTTPSNSLFGTSSSSSSTSSSLFGSTTSATTPSS
LFGTTTTSSDSKSETKTTPSLSSGGLFSTTSASPFSIPSSTSSSGLFGSTNQTESKVATT
TTTAATTATPSTSLFGSTTTPSTSSSTSSLTTTPSTGLFGASSSTTPSTGLFGSATTPST
GLFGASSSSSSSSIXSSSTTSTTTTPXTGLFGSTTPSTGLF

Query= Contig-U13509-1 (Contig-U13509-1Q)
/CSM_Contig/Contig-U13509-1Q.Seq.d
         (1025 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U13509-1 (Contig-U13509-1Q) /CSM_Contig/Conti...   965  0.0
Contig-U13734-1 (Contig-U13734-1Q) /CSM_Contig/Conti...    46  8e-05
Contig-U12135-1 (Contig-U12135-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U05839-1 (Contig-U05839-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U11889-1 (Contig-U11889-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U11532-1 (Contig-U11532-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U09872-1 (Contig-U09872-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U05245-1 (Contig-U05245-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U03036-1 (Contig-U03036-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U11929-1 (Contig-U11929-1Q) /CSM_Contig/Conti...    38  0.018

>Contig-U13509-1 (Contig-U13509-1Q) /CSM_Contig/Contig-U13509-1Q.Seq.d
          Length = 1025

 Score =  965 bits (487), Expect = 0.0
 Identities = 487/487 (100%)
 Strand = Plus / Plus

                                                                       
Query: 431 tactacttcaacaaccacaccatcaaacagtttatttggaacatcatcatcctcctcatc 490
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tactacttcaacaaccacaccatcaaacagtttatttggaacatcatcatcctcctcatc 490

                                                                       
Query: 491 tacctctagctctttatttggtagcaccacttcagcaacaacaccatcaagtttatttgg 550
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tacctctagctctttatttggtagcaccacttcagcaacaacaccatcaagtttatttgg 550

                                                                       
Query: 551 aacaacaacaacatcatctgactcaaaatctgagacaaaaacaactccatcactttcttc 610
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aacaacaacaacatcatctgactcaaaatctgagacaaaaacaactccatcactttcttc 610

                                                                       
Query: 611 aggaggattatttagtacaacatcagcctcaccattttcaattccatcttcaacttcatc 670
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 aggaggattatttagtacaacatcagcctcaccattttcaattccatcttcaacttcatc 670

                                                                       
Query: 671 cagtggtttatttgggtcaacaaatcaaactgaatcaaaggtagctactaccacaactac 730
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 cagtggtttatttgggtcaacaaatcaaactgaatcaaaggtagctactaccacaactac 730

                                                                       
Query: 731 agctgcaacaactgcaaccccatcaacatcattatttggttcaacaactacaccatcgac 790
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 agctgcaacaactgcaaccccatcaacatcattatttggttcaacaactacaccatcgac 790

                                                                       
Query: 791 atcatcttcaacatcatctttaactacaacaccatctactggattgtttggtgcttcatc 850
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 atcatcttcaacatcatctttaactacaacaccatctactggattgtttggtgcttcatc 850

                                                                       
Query: 851 atctacaaccccatcaactggattatttggttccgcaacaaccccatcaactggattgtt 910
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 atctacaaccccatcaactggattatttggttccgcaacaaccccatcaactggattgtt 910

                  
Query: 911 tggtgct 917
           |||||||
Sbjct: 911 tggtgct 917


 Score =  385 bits (194), Expect = e-107
 Identities = 194/194 (100%)
 Strand = Plus / Plus

                                                                       
Query: 200 aacatcattatttggttcgacaactacctctggtttattctctaatccatcaacaacatc 259
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 aacatcattatttggttcgacaactacctctggtttattctctaatccatcaacaacatc 259

                                                                       
Query: 260 aactggttcattattttcatcaaacccacttggttcaacagcttccacttctagtttatt 319
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aactggttcattattttcatcaaacccacttggttcaacagcttccacttctagtttatt 319

                                                                       
Query: 320 tggtgcctcaacattagcttctactgctactactacagctacaccaacaacaagcttatt 379
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tggtgcctcaacattagcttctactgctactactacagctacaccaacaacaagcttatt 379

                         
Query: 380 tggctcaacaacac 393
           ||||||||||||||
Sbjct: 380 tggctcaacaacac 393


 Score =  137 bits (69), Expect = 3e-32
 Identities = 69/69 (100%)
 Strand = Plus / Plus

                                                                       
Query: 114 acatcttcaaaaccatcattattcccaactacctctaaaaaggaaaagatagatgataaa 173
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 acatcttcaaaaccatcattattcccaactacctctaaaaaggaaaagatagatgataaa 173

                    
Query: 174 ccatctaca 182
           |||||||||
Sbjct: 174 ccatctaca 182


 Score =  127 bits (64), Expect = 3e-29
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                        
Query: 953  ttctaccacctcaacaaccaccacaccatnaactggnttatttggatcaacaacaccatc 1012
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 953  ttctaccacctcaacaaccaccacaccatnaactggnttatttggatcaacaacaccatc 1012

                         
Query: 1013 aacnggcttattt 1025
            |||||||||||||
Sbjct: 1013 aacnggcttattt 1025


 Score = 91.7 bits (46), Expect = 1e-18
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                      
Query: 1  cattattaacaagttcatttttaacnnnnnnnggtgaaaatgatgatgattcatccgatg 60
          |||||||||||||||||||||||||       ||||||||||||||||||||||||||||
Sbjct: 1  cattattaacaagttcatttttaacaaaaaaaggtgaaaatgatgatgattcatccgatg 60

                 
Query: 61 aagattc 67
          |||||||
Sbjct: 61 aagattc 67


 Score = 54.0 bits (27), Expect = 3e-07
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 816 acaacaccatctactggattgtttggtgcttcatc 850
           ||||| ||||| |||||||||||||||||||||||
Sbjct: 888 acaaccccatcaactggattgtttggtgcttcatc 922


 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 754 caacatcattatttggttcaacaactac 781
           ||||||||||||||||||| ||||||||
Sbjct: 199 caacatcattatttggttcgacaactac 226


 Score = 46.1 bits (23), Expect = 8e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 200 aacatcattatttggttcgacaactac 226
           |||||||||||||||||| ||||||||
Sbjct: 755 aacatcattatttggttcaacaactac 781


 Score = 40.1 bits (20), Expect = 0.005
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 990  ttatttggatcaacaacaccatca 1013
            |||||||| |||||||||||||||
Sbjct: 375  ttatttggctcaacaacaccatca 398


 Score = 36.2 bits (18), Expect = 0.072
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 472 catcatcatcctcctcatctac 493
           |||||||||| |||||||||||
Sbjct: 412 catcatcatcatcctcatctac 433


 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 526  caacaacaccatcaa 540
            |||||||||||||||
Sbjct: 1000 caacaacaccatcaa 1014


 Score = 30.2 bits (15), Expect = 4.5
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                              
Query: 472 catcatcatcctcctcatc 490
           ||||||||||||| |||||
Sbjct: 400 catcatcatcctcatcatc 418


 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 1000 caacaacaccatcaa 1014
            |||||||||||||||
Sbjct: 526  caacaacaccatcaa 540


>Contig-U13734-1 (Contig-U13734-1Q) /CSM_Contig/Contig-U13734-1Q.Seq.d
          Length = 584

 Score = 46.1 bits (23), Expect = 8e-05
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 751 catcaacatcattatttggttcaacaactac 781
           |||||||||||||||||||  ||||||||||
Sbjct: 333 catcaacatcattatttggaccaacaactac 363


 Score = 32.2 bits (16), Expect = 1.1
 Identities = 25/28 (89%)
 Strand = Plus / Plus

                                       
Query: 200 aacatcattatttggttcgacaactacc 227
           |||||||||||||||  | |||||||||
Sbjct: 337 aacatcattatttggaccaacaactacc 364


 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 267 tcattattttcatca 281
           |||||||||||||||
Sbjct: 206 tcattattttcatca 220


>Contig-U12135-1 (Contig-U12135-1Q) /CSM_Contig/Contig-U12135-1Q.Seq.d
          Length = 879

 Score = 42.1 bits (21), Expect = 0.001
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 886 caacaaccccatcaactggattgtttggt 914
           ||||||| |||||||| ||||||||||||
Sbjct: 62  caacaacaccatcaacaggattgtttggt 34


 Score = 42.1 bits (21), Expect = 0.001
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 750 ccatcaacatcattatttggttcaacaac 778
           |||||||||  ||||||||||||||||||
Sbjct: 144 ccatcaacaggattatttggttcaacaac 116


 Score = 40.1 bits (20), Expect = 0.005
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 861 ccatcaactggattatttggttccgcaacaac 892
           |||||||| ||||||||||||||  |||||||
Sbjct: 144 ccatcaacaggattatttggttcaacaacaac 113


 Score = 38.2 bits (19), Expect = 0.018
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                      
Query: 816 acaacaccatctactggattgtttggt 842
           ||||||||||| || ||||||||||||
Sbjct: 60  acaacaccatcaacaggattgtttggt 34


 Score = 32.2 bits (16), Expect = 1.1
 Identities = 28/32 (87%)
 Strand = Plus / Minus

                                           
Query: 745 caaccccatcaacatcattatttggttcaaca 776
           |||| |||||||||  ||| ||||||||||||
Sbjct: 59  caacaccatcaacaggattgtttggttcaaca 28


 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                            
Query: 1000 caacaacaccatcaac 1015
            ||||||||||||||||
Sbjct: 62   caacaacaccatcaac 47


 Score = 30.2 bits (15), Expect = 4.5
 Identities = 21/23 (91%)
 Strand = Plus / Minus

                                  
Query: 543 ttatttggaacaacaacaacatc 565
           ||||||||  |||||||||||||
Sbjct: 132 ttatttggttcaacaacaacatc 110


 Score = 30.2 bits (15), Expect = 4.5
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 526 caacaacaccatcaa 540
           |||||||||||||||
Sbjct: 62  caacaacaccatcaa 48


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 22,721
Number of Sequences: 6905
Number of extensions: 22721
Number of successful extensions: 6181
Number of sequences better than 10.0: 346
length of query: 1025
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1009
effective length of database: 5,564,391
effective search space: 5614470519
effective search space used: 5614470519
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

Query= Contig-U13509-1 (Contig-U13509-1Q) /CSM_Contig/Contig-U13509-1Q.Seq.d
         (1025 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...   965   0.0    4
(BJ415538) Dictyostelium discoideum cDNA clone:ddv22l20, 5' ...   890   0.0    2
(BJ420620) Dictyostelium discoideum cDNA clone:ddv39k20, 5' ...   468   0.0    4
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041...    46   4e-08  8
(BJ416506) Dictyostelium discoideum cDNA clone:ddv26k16, 5' ...    40   2e-06  5
(AU060896) Dictyostelium discoideum slug cDNA, clone SLC134.       42   4e-05  2
(BJ425810) Dictyostelium discoideum cDNA clone:ddv56m20, 5' ...    40   5e-05  4
(BJ368300) Dictyostelium discoideum cDNA clone:ddc46j05, 5' ...    40   1e-04  4
(BJ424034) Dictyostelium discoideum cDNA clone:ddv51n05, 5' ...    40   1e-04  4
(BJ340841) Dictyostelium discoideum cDNA clone:dda4h06, 3' e...    38   2e-04  4
(BJ432209) Dictyostelium discoideum cDNA clone:ddv18d02, 3' ...    40   2e-04  4
(AU060486) Dictyostelium discoideum slug cDNA, clone SLJ883.       34   8e-04  4
(BJ387826) Dictyostelium discoideum cDNA clone:dds5a11, 5' e...    40   0.002  4
(EY348297) CAWZ16414.fwd CAWZ Helobdella robusta Primary Lat...    36   0.002  4
(BJ327351) Dictyostelium discoideum cDNA clone:dda20k01, 5' ...    40   0.004  4
(BJ391048) Dictyostelium discoideum cDNA clone:dds14g19, 5' ...    40   0.004  4
(BJ368874) Dictyostelium discoideum cDNA clone:ddc48l10, 5' ...    40   0.006  4
(BJ426414) Dictyostelium discoideum cDNA clone:ddv58l21, 5' ...    40   0.006  4
(BJ329437) Dictyostelium discoideum cDNA clone:dda24o24, 5' ...    40   0.007  4
(AC095877) Rattus norvegicus clone CH230-10G13, *** SEQUENCI...    42   0.007  2
(AC119512) Rattus norvegicus clone CH230-392J8, WORKING DRAF...    42   0.007  2
(AC171141) Helobdella robusta clone CH306-1B3, complete sequ...    34   0.010  8
(BJ343520) Dictyostelium discoideum cDNA clone:dda16h07, 3' ...    40   0.017  3
(BJ361489) Dictyostelium discoideum cDNA clone:ddc17l09, 5' ...    36   0.019  4
(BJ412244) Dictyostelium discoideum cDNA clone:ddv7c16, 5' e...    40   0.021  4
(BJ425132) Dictyostelium discoideum cDNA clone:ddv54a23, 5' ...    46   0.031  2
(EY307259) CAWX20364.fwd CAWX Helobdella robusta Primary Ear...    36   0.031  3
(BJ340551) Dictyostelium discoideum cDNA clone:dda2l15, 3' e...    40   0.032  3
(BJ432576) Dictyostelium discoideum cDNA clone:ddv19h06, 3' ...    40   0.037  3
(AL422462) T7 end of clone AZ0AA001E01 of library AZ0AA from...    36   0.037  3
(BJ424092) Dictyostelium discoideum cDNA clone:ddv51i08, 5' ...    40   0.042  3
(BX927325) Zebrafish DNA sequence from clone DKEYP-47G1 in l...    52   0.042  1
(BX163360) Danio rerio genomic clone DKEY-166H20, genomic su...    52   0.042  1
(BJ421619) Dictyostelium discoideum cDNA clone:ddv43d11, 5' ...    40   0.050  3
(FC818716) Sr_pAMT7_012l22_T7 S. ratti mixed stage pAMP Stro...    30   0.060  4
(U81000) Dictyostelium discoideum unknown protein mRNA, prom...    38   0.060  3
(BJ340225) Dictyostelium discoideum cDNA clone:dda12o01, 3' ...    40   0.061  3
(CO464301) MZCCL15046C03.g Maize Endosperm cDNA Library Zea ...    28   0.063  5
(FC820036) Sr_pAMT7_016i13_T7 S. ratti mixed stage pAMP Stro...    30   0.072  4
(BJ359835) Dictyostelium discoideum cDNA clone:ddc2j20, 5' e...    40   0.074  3
(CZ546707) SRAA-aad69e12.b1 Strongyloides ratti whole genome...    30   0.081  4
(EL428367) CHCM7649.b1_B18.ab1 CHC(LMS) Texas blueweed Helia...    38   0.082  3
(EY326682) CAWY11759.fwd CAWY Helobdella robusta Subtracted ...    40   0.090  3
(AU039037) Dictyostelium discoideum slug cDNA, clone SSM308.       40   0.092  3
(EY302672) CAWX16284.fwd CAWX Helobdella robusta Primary Ear...    32   0.100  3
(EY364493) CAWZ9460.fwd CAWZ Helobdella robusta Primary Late...    38   0.13   2
(EY339804) CAWY9914.fwd CAWY Helobdella robusta Subtracted E...    38   0.13   2
(EY380478) CAXA2900.fwd CAXA Helobdella robusta Subtracted L...    38   0.13   2
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...    40   0.14   9
(BJ411401) Dictyostelium discoideum cDNA clone:ddv4d09, 5' e...    40   0.15   3
(BJ323961) Dictyostelium discoideum cDNA clone:dda4h06, 5' e...    40   0.15   3
(FE746392) CAYC3665.g1 CAYC Petrolisthes cinctipes heart, ne...    34   0.15   3
(BJ392814) Dictyostelium discoideum cDNA clone:dds29e02, 5' ...    38   0.16   3
(EB795000) 5322031 ZF01 Danio rerio cDNA clone 2239569, mRNA...    30   0.16   4
(BJ426896) Dictyostelium discoideum cDNA clone:ddv60i16, 5' ...    40   0.17   3
(BJ423459) Dictyostelium discoideum cDNA clone:ddv49d10, 5' ...    40   0.17   3
(BJ409940) Dictyostelium discoideum cDNA clone:ddv10j17, 5' ...    36   0.18   3
(BJ397743) Dictyostelium discoideum cDNA clone:dds47m08, 5' ...    36   0.18   3
(BJ427235) Dictyostelium discoideum cDNA clone:ddv61c20, 5' ...    40   0.19   3
(AP006852) Candida albicans genomic DNA, chromosome 7, compl...    44   0.19   14
(BJ422292) Dictyostelium discoideum cDNA clone:ddv45p10, 5' ...    40   0.19   3
(AV973760) Ciona intestinalis cDNA, clone:cieg32j17, 5' end,...    32   0.20   4
(BJ422539) Dictyostelium discoideum cDNA clone:ddv46c07, 5' ...    40   0.21   3
(DQ121094) Hucho taimen clone ZA-87 microsatellite sequence.       34   0.22   3
(BJ418828) Dictyostelium discoideum cDNA clone:ddv34l02, 5' ...    40   0.22   3
(BJ415362) Dictyostelium discoideum cDNA clone:ddv22g09, 5' ...    40   0.22   3
(BJ324402) Dictyostelium discoideum cDNA clone:dda6k02, 5' e...    40   0.23   3
(EY297838) CAWX13581.fwd CAWX Helobdella robusta Primary Ear...    36   0.23   4
(AF362371) Dictyostelium discoideum histidine kinase DhkI (d...    38   0.27   5
(BJ426408) Dictyostelium discoideum cDNA clone:ddv58k21, 5' ...    40   0.28   3
(BJ422291) Dictyostelium discoideum cDNA clone:ddv45p09, 5' ...    40   0.29   3
(BJ420596) Dictyostelium discoideum cDNA clone:ddv39e21, 5' ...    40   0.29   3
(EY336693) CAWY785.fwd CAWY Helobdella robusta Subtracted Ea...    34   0.29   3
(EY319535) CAWX6934.fwd CAWX Helobdella robusta Primary Earl...    36   0.30   3
(BJ426352) Dictyostelium discoideum cDNA clone:ddv58n17, 5' ...    40   0.30   3
(EY297786) CAWX13554.fwd CAWX Helobdella robusta Primary Ear...    32   0.30   3
(EY312548) CAWX24075.fwd CAWX Helobdella robusta Primary Ear...    36   0.34   3
(AW690845) NF035F09ST1F1000 Developing stem Medicago truncat...    30   0.36   4
(BJ371297) Dictyostelium discoideum cDNA clone:ddc57m07, 5' ...    32   0.37   3
(BJ440308) Dictyostelium discoideum cDNA clone:ddv43d09, 3' ...    36   0.37   3
(AL439958) T7 end of clone BD0AA009A10 of library BD0AA from...    30   0.39   4
(BP722080) Xenopus laevis NBRP cDNA clone:XL450n07ex, 3' end.      40   0.39   2
(BJ356464) Dictyostelium discoideum cDNA clone:dda60k10, 3' ...    36   0.43   2
(BJ441093) Dictyostelium discoideum cDNA clone:ddv45l15, 3' ...    36   0.46   3
(EY346411) CAWZ15042.fwd CAWZ Helobdella robusta Primary Lat...    34   0.48   2
(EY362622) CAWZ8344.rev CAWZ Helobdella robusta Primary Late...    36   0.50   2
(BH651626) BOMEH68TR BO_2_3_KB Brassica oleracea genomic clo...    40   0.52   2
(BJ375090) Dictyostelium discoideum cDNA clone:ddc17l09, 3' ...    38   0.54   2
(AB050504) Dictyostelium discoideum GP138-1 pseudogene.            36   0.60   3
(DW042203) CFW300-E02.y1d-s SHGC-CFW2 Gasterosteus aculeatus...    34   0.61   4
(C25756) Dictyostelium discoideum gamete cDNA, clone FC-AZ15.      34   0.66   3
(AC169178) Medicago truncatula chromosome 7 BAC clone mth2-2...    48   0.66   1
(AC155893) Medicago truncatula chromosome 7 clone mth2-65e4,...    48   0.66   1
(AC129454) Rattus norvegicus clone CH230-9H18, WORKING DRAFT...    48   0.66   1
(CU896569) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    48   0.66   1
(AC189935) Macaca mulatta clone CH250-226C15, WORKING DRAFT ...    48   0.66   1
(AY610239) Sus scrofa clone rdbla0126_b21.y1.abd, mRNA seque...    48   0.66   1
(AK233819) Sus scrofa mRNA, clone:MLN010039F09, expressed in...    48   0.66   1
(CG966470) MBEEJ40TFB mth2 Medicago truncatula genomic clone...    48   0.66   1
(DV902480) POSM0605022_K24F porcine skeletal muscle cDNA lib...    48   0.66   1

>(AC116957) Dictyostelium discoideum chromosome 2 map 1685067-2090751
              strain AX4, complete sequence.
          Length = 405682

 Score =  965 bits (487), Expect(4) = 0.0
 Identities = 487/487 (100%)
 Strand = Plus / Plus


Query: 431    tactacttcaacaaccacaccatcaaacagtttatttggaacatcatcatcctcctcatc 490
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213126 tactacttcaacaaccacaccatcaaacagtttatttggaacatcatcatcctcctcatc 213185


Query: 491    tacctctagctctttatttggtagcaccacttcagcaacaacaccatcaagtttatttgg 550
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213186 tacctctagctctttatttggtagcaccacttcagcaacaacaccatcaagtttatttgg 213245


Query: 551    aacaacaacaacatcatctgactcaaaatctgagacaaaaacaactccatcactttcttc 610
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213246 aacaacaacaacatcatctgactcaaaatctgagacaaaaacaactccatcactttcttc 213305


Query: 611    aggaggattatttagtacaacatcagcctcaccattttcaattccatcttcaacttcatc 670
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213306 aggaggattatttagtacaacatcagcctcaccattttcaattccatcttcaacttcatc 213365


Query: 671    cagtggtttatttgggtcaacaaatcaaactgaatcaaaggtagctactaccacaactac 730
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213366 cagtggtttatttgggtcaacaaatcaaactgaatcaaaggtagctactaccacaactac 213425


Query: 731    agctgcaacaactgcaaccccatcaacatcattatttggttcaacaactacaccatcgac 790
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213426 agctgcaacaactgcaaccccatcaacatcattatttggttcaacaactacaccatcgac 213485


Query: 791    atcatcttcaacatcatctttaactacaacaccatctactggattgtttggtgcttcatc 850
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213486 atcatcttcaacatcatctttaactacaacaccatctactggattgtttggtgcttcatc 213545


Query: 851    atctacaaccccatcaactggattatttggttccgcaacaaccccatcaactggattgtt 910
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213546 atctacaaccccatcaactggattatttggttccgcaacaaccccatcaactggattgtt 213605


Query: 911    tggtgct 917
              |||||||
Sbjct: 213606 tggtgct 213612

 Score =  385 bits (194), Expect(4) = 0.0
 Identities = 194/194 (100%)
 Strand = Plus / Plus


Query: 200    aacatcattatttggttcgacaactacctctggtttattctctaatccatcaacaacatc 259
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212895 aacatcattatttggttcgacaactacctctggtttattctctaatccatcaacaacatc 212954


Query: 260    aactggttcattattttcatcaaacccacttggttcaacagcttccacttctagtttatt 319
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212955 aactggttcattattttcatcaaacccacttggttcaacagcttccacttctagtttatt 213014


Query: 320    tggtgcctcaacattagcttctactgctactactacagctacaccaacaacaagcttatt 379
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213015 tggtgcctcaacattagcttctactgctactactacagctacaccaacaacaagcttatt 213074


Query: 380    tggctcaacaacac 393
              ||||||||||||||
Sbjct: 213075 tggctcaacaacac 213088

 Score =  143 bits (72), Expect(4) = 0.0
 Identities = 80/84 (95%)
 Strand = Plus / Plus


Query: 942    atatnatcatcttctaccacctcaacaaccaccacaccatnaactggnttatttggatca 1001
              |||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 213637 atatcatcatcttctaccacctcaacaaccaccacaccatcaactggcttatttggatca 213696


Query: 1002   acaacaccatcaacnggcttattt 1025
              |||||||||||||| |||||||||
Sbjct: 213697 acaacaccatcaactggcttattt 213720

 Score = 89.7 bits (45), Expect(4) = 0.0
 Identities = 45/45 (100%)
 Strand = Plus / Plus


Query: 138    ccaactacctctaaaaaggaaaagatagatgataaaccatctaca 182
              |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212833 ccaactacctctaaaaaggaaaagatagatgataaaccatctaca 212877

 Score = 50.1 bits (25), Expect(10) = 4e-20
 Identities = 25/25 (100%)
 Strand = Plus / Plus


Query: 1      cattattaacaagttcatttttaac 25
              |||||||||||||||||||||||||
Sbjct: 212698 cattattaacaagttcatttttaac 212722

 Score = 46.1 bits (23), Expect(10) = 4e-20
 Identities = 26/27 (96%)
 Strand = Plus / Plus


Query: 200    aacatcattatttggttcgacaactac 226
              |||||||||||||||||| ||||||||
Sbjct: 213450 aacatcattatttggttcaacaactac 213476

 Score = 46.1 bits (23), Expect(10) = 4e-20
 Identities = 42/49 (85%)
 Strand = Plus / Plus


Query: 967    caaccaccacaccatnaactggnttatttggatcaacaacaccatcaac 1015
              ||||||||||||||| ||| ||  | ||||||||| || ||||||||||
Sbjct: 214358 caaccaccacaccatcaacaggtctctttggatcagcagcaccatcaac 214406

 Score = 40.1 bits (20), Expect(10) = 4e-20
 Identities = 29/32 (90%)
 Strand = Plus / Plus


Query: 861    ccatcaactggattatttggttccgcaacaac 892
              |||||||| ||||||||||||||  |||||||
Sbjct: 214009 ccatcaacaggattatttggttcaacaacaac 214040

 Score = 36.2 bits (18), Expect(10) = 4e-20
 Identities = 27/30 (90%)
 Strand = Plus / Plus


Query: 747    accccatcaacatcattatttggttcaaca 776
              ||||||||||||  ||||||||| ||||||
Sbjct: 213955 accccatcaacaggattatttggctcaaca 213984

 Score = 36.2 bits (18), Expect(10) = 4e-20
 Identities = 24/26 (92%)
 Strand = Plus / Plus


Query: 889    caaccccatcaactggattgtttggt 914
              ||||||||||||| ||||| ||||||
Sbjct: 214076 caaccccatcaacaggattatttggt 214101

 Score = 34.2 bits (17), Expect(10) = 4e-20
 Identities = 20/21 (95%)
 Strand = Plus / Plus


Query: 543    ttatttggaacaacaacaaca 563
              ||||||||| |||||||||||
Sbjct: 213715 ttatttggatcaacaacaaca 213735

 Score = 30.2 bits (15), Expect(10) = 4e-20
 Identities = 15/15 (100%)
 Strand = Plus / Plus


Query: 526    caacaacaccatcaa 540
              |||||||||||||||
Sbjct: 213695 caacaacaccatcaa 213709

 Score = 28.2 bits (14), Expect(10) = 4e-20
 Identities = 17/18 (94%)
 Strand = Plus / Plus


Query: 439    caacaaccacaccatcaa 456
              |||| |||||||||||||
Sbjct: 213662 caaccaccacaccatcaa 213679

 Score = 26.3 bits (13), Expect(10) = 4e-20
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 590    aacaactccatca 602
              |||||||||||||
Sbjct: 213903 aacaactccatca 213915

 Score = 54.0 bits (27), Expect(11) = 4e-17
 Identities = 33/35 (94%)
 Strand = Plus / Plus


Query: 816    acaacaccatctactggattgtttggtgcttcatc 850
              ||||| ||||| |||||||||||||||||||||||
Sbjct: 213583 acaaccccatcaactggattgtttggtgcttcatc 213617

 Score = 50.1 bits (25), Expect(11) = 4e-17
 Identities = 56/67 (83%)
 Strand = Plus / Plus


Query: 949    catcttctaccacctcaacaaccaccacaccatnaactggnttatttggatcaacaacac 1008
              ||||||| ||||| || ||||| |||||||||  || ||| ||||||||||| ||||| |
Sbjct: 213779 catcttccaccacatcgacaactaccacaccaccaaatggcttatttggatctacaactc 213838


Query: 1009   catcaac 1015
              | |||||
Sbjct: 213839 cctcaac 213845

 Score = 42.1 bits (21), Expect(11) = 4e-17
 Identities = 27/29 (93%)
 Strand = Plus / Plus


Query: 886    caacaaccccatcaactggattgtttggt 914
              ||||||| |||||||| ||||||||||||
Sbjct: 213743 caacaacaccatcaacaggattgtttggt 213771

 Score = 36.2 bits (18), Expect(11) = 4e-17
 Identities = 24/26 (92%)
 Strand = Plus / Plus


Query: 855    acaaccccatcaactggattatttgg 880
              ||||| ||||||||||| ||||||||
Sbjct: 213697 acaacaccatcaactggcttatttgg 213722

 Score = 32.2 bits (16), Expect(11) = 4e-17
 Identities = 19/20 (95%)
 Strand = Plus / Plus


Query: 689   aacaaatcaaactgaatcaa 708
             ||||||||||||| ||||||
Sbjct: 35566 aacaaatcaaactcaatcaa 35585

 Score = 32.2 bits (16), Expect(11) = 4e-17
 Identities = 25/28 (89%)
 Strand = Plus / Plus


Query: 781    caccatcgacatcatcttcaacatcatc 808
              ||||||| |||||| | |||||||||||
Sbjct: 211444 caccatcaacatcaacatcaacatcatc 211471

 Score = 30.2 bits (15), Expect(11) = 4e-17
 Identities = 15/15 (100%)
 Strand = Plus / Plus


Query: 526  caacaacaccatcaa 540
            |||||||||||||||
Sbjct: 7179 caacaacaccatcaa 7193

 Score = 28.2 bits (14), Expect(11) = 4e-17
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 640  caccattttcaatt 653
            ||||||||||||||
Sbjct: 8910 caccattttcaatt 8923

 Score = 28.2 bits (14), Expect(11) = 4e-17
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 752   atcaacatcattat 765
             ||||||||||||||
Sbjct: 37960 atcaacatcattat 37973

 Score = 28.2 bits (14), Expect(11) = 4e-17
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 761    attatttggttcaa 774
              ||||||||||||||
Sbjct: 107389 attatttggttcaa 107402

 Score = 26.3 bits (13), Expect(11) = 4e-17
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 556  caacaacatcatc 568
            |||||||||||||
Sbjct: 7191 caacaacatcatc 7203

 Score = 54.0 bits (27), Expect(11) = 6e-09
 Identities = 31/33 (93%)
 Strand = Plus / Plus


Query: 975    acaccatnaactggnttatttggatcaacaaca 1007
              ||||||| |||||| ||||||||||||||||||
Sbjct: 213700 acaccatcaactggcttatttggatcaacaaca 213732

 Score = 46.1 bits (23), Expect(11) = 6e-09
 Identities = 26/27 (96%)
 Strand = Plus / Plus


Query: 888    acaaccccatcaactggattgtttggt 914
              |||||||||||||||||||| ||||||
Sbjct: 213550 acaaccccatcaactggattatttggt 213576

 Score = 32.2 bits (16), Expect(11) = 6e-09
 Identities = 25/28 (89%)
 Strand = Plus / Plus


Query: 856    caaccccatcaactggattatttggttc 883
              |||||||||||||   ||||||||||||
Sbjct: 213440 caaccccatcaacatcattatttggttc 213467

 Score = 32.2 bits (16), Expect(11) = 6e-09
 Identities = 16/16 (100%)
 Strand = Plus / Plus


Query: 1000   caacaacaccatcaac 1015
              ||||||||||||||||
Sbjct: 213743 caacaacaccatcaac 213758

 Score = 30.2 bits (15), Expect(11) = 6e-09
 Identities = 15/15 (100%)
 Strand = Plus / Plus


Query: 246  ccatcaacaacatca 260
            |||||||||||||||
Sbjct: 7187 ccatcaacaacatca 7201

 Score = 28.2 bits (14), Expect(11) = 6e-09
 Identities = 17/18 (94%)
 Strand = Plus / Plus


Query: 750    ccatcaacatcattattt 767
              |||||| |||||||||||
Sbjct: 211338 ccatcatcatcattattt 211355

 Score = 28.2 bits (14), Expect(11) = 6e-09
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 774    acaactacaccatc 787
              ||||||||||||||
Sbjct: 212193 acaactacaccatc 212206

 Score = 26.3 bits (13), Expect(11) = 6e-09
 Identities = 16/17 (94%)
 Strand = Plus / Plus


Query: 439  caacaaccacaccatca 455
            ||||||||||| |||||
Sbjct: 9255 caacaaccacaacatca 9271

 Score = 26.3 bits (13), Expect(11) = 6e-09
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 545   atttggaacaaca 557
             |||||||||||||
Sbjct: 70598 atttggaacaaca 70610

 Score = 26.3 bits (13), Expect(11) = 6e-09
 Identities = 16/17 (94%)
 Strand = Plus / Plus


Query: 552   acaacaacaacatcatc 568
             |||||||||||| ||||
Sbjct: 72690 acaacaacaacagcatc 72706

 Score = 26.3 bits (13), Expect(11) = 6e-09
 Identities = 16/17 (94%)
 Strand = Plus / Plus


Query: 578    atctgagacaaaaacaa 594
              |||| ||||||||||||
Sbjct: 151829 atctaagacaaaaacaa 151845

 Score = 38.2 bits (19), Expect(10) = 3e-08
 Identities = 25/27 (92%)
 Strand = Plus / Plus


Query: 816    acaacaccatctactggattgtttggt 842
              ||||||||||| || ||||||||||||
Sbjct: 213745 acaacaccatcaacaggattgtttggt 213771

 Score = 36.2 bits (18), Expect(10) = 3e-08
 Identities = 21/22 (95%)
 Strand = Plus / Plus


Query: 472    catcatcatcctcctcatctac 493
              |||||||||| |||||||||||
Sbjct: 213107 catcatcatcatcctcatctac 213128

 Score = 36.2 bits (18), Expect(10) = 3e-08
 Identities = 24/26 (92%)
 Strand = Plus / Plus


Query: 855    acaaccccatcaactggattatttgg 880
              ||||| |||||||| |||||||||||
Sbjct: 213904 acaactccatcaacaggattatttgg 213929

 Score = 36.2 bits (18), Expect(10) = 3e-08
 Identities = 28/32 (87%)
 Strand = Plus / Plus


Query: 969    accaccacaccatnaactggnttatttggatc 1000
              ||||| |||||||  ||||| |||||||||||
Sbjct: 214267 accactacaccatcgactggattatttggatc 214298

 Score = 32.2 bits (16), Expect(10) = 3e-08
 Identities = 25/28 (89%)
 Strand = Plus / Plus


Query: 200    aacatcattatttggttcgacaactacc 227
              |||||||||||||||  | |||||||||
Sbjct: 212039 aacatcattatttggaccaacaactacc 212066

 Score = 32.2 bits (16), Expect(10) = 3e-08
 Identities = 25/28 (89%)
 Strand = Plus / Plus


Query: 745    caaccccatcaacatcattatttggttc 772
              |||||||||||||   ||||||||||||
Sbjct: 213551 caaccccatcaactggattatttggttc 213578

 Score = 30.2 bits (15), Expect(10) = 3e-08
 Identities = 15/15 (100%)
 Strand = Plus / Plus


Query: 540    agtttatttggaaca 554
              |||||||||||||||
Sbjct: 213154 agtttatttggaaca 213168

 Score = 30.2 bits (15), Expect(10) = 3e-08
 Identities = 21/23 (91%)
 Strand = Plus / Plus


Query: 891    accccatcaactggattgtttgg 913
              ||||||||||| ||||| |||||
Sbjct: 213955 accccatcaacaggattatttgg 213977

 Score = 28.2 bits (14), Expect(10) = 3e-08
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 151    aaaaggaaaagata 164
              ||||||||||||||
Sbjct: 197592 aaaaggaaaagata 197605

 Score = 28.2 bits (14), Expect(10) = 3e-08
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 458    cagtttatttggaa 471
              ||||||||||||||
Sbjct: 212648 cagtttatttggaa 212661

 Score = 48.1 bits (24), Expect(6) = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Plus


Query: 856    caaccccatcaactggattatttggttc 883
              ||||||||||||| ||||||||||||||
Sbjct: 214076 caaccccatcaacaggattatttggttc 214103

 Score = 46.1 bits (23), Expect(6) = 3e-05
 Identities = 29/31 (93%)
 Strand = Plus / Plus


Query: 751    catcaacatcattatttggttcaacaactac 781
              |||||||||||||||||||  ||||||||||
Sbjct: 212035 catcaacatcattatttggaccaacaactac 212065

 Score = 34.2 bits (17), Expect(6) = 3e-05
 Identities = 17/17 (100%)
 Strand = Plus / Plus


Query: 552    acaacaacaacatcatc 568
              |||||||||||||||||
Sbjct: 194824 acaacaacaacatcatc 194840

 Score = 28.2 bits (14), Expect(6) = 3e-05
 Identities = 23/26 (88%)
 Strand = Plus / Plus


Query: 816    acaacaccatctactggattgtttgg 841
              ||||||||||| ||||| || |||||
Sbjct: 213697 acaacaccatcaactggcttatttgg 213722

 Score = 28.2 bits (14), Expect(6) = 3e-05
 Identities = 17/18 (94%)
 Strand = Plus / Plus


Query: 990    ttatttggatcaacaaca 1007
              ||||||||||| ||||||
Sbjct: 214198 ttatttggatctacaaca 214215

 Score = 26.3 bits (13), Expect(6) = 3e-05
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 250    caacaacatcaac 262
              |||||||||||||
Sbjct: 194044 caacaacatcaac 194056

 Score = 48.1 bits (24), Expect(7) = 1e-04
 Identities = 27/28 (96%)
 Strand = Plus / Plus


Query: 754    caacatcattatttggttcaacaactac 781
              ||||||||||||||||||| ||||||||
Sbjct: 212894 caacatcattatttggttcgacaactac 212921

 Score = 46.1 bits (23), Expect(7) = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus


Query: 855    acaaccccatcaactggattatttggt 881
              |||||||||||||||||||| ||||||
Sbjct: 213583 acaaccccatcaactggattgtttggt 213609

 Score = 32.2 bits (16), Expect(7) = 1e-04
 Identities = 25/28 (89%)
 Strand = Plus / Plus


Query: 886    caacaaccccatcaactggattgtttgg 913
              ||||||| ||||||||||| || |||||
Sbjct: 213695 caacaacaccatcaactggcttatttgg 213722

 Score = 28.2 bits (14), Expect(7) = 1e-04
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 550    gaacaacaacaaca 563
              ||||||||||||||
Sbjct: 132007 gaacaacaacaaca 132020

 Score = 28.2 bits (14), Expect(7) = 1e-04
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 990    ttatttggatcaac 1003
              ||||||||||||||
Sbjct: 214168 ttatttggatcaac 214181

 Score = 26.3 bits (13), Expect(7) = 1e-04
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 360   acaccaacaacaa 372
             |||||||||||||
Sbjct: 78372 acaccaacaacaa 78384

 Score = 26.3 bits (13), Expect(7) = 1e-04
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 657    tcttcaacttcat 669
              |||||||||||||
Sbjct: 150628 tcttcaacttcat 150640

 Score = 40.1 bits (20), Expect(9) = 0.22
 Identities = 26/28 (92%)
 Strand = Plus / Plus


Query: 745    caaccccatcaacatcattatttggttc 772
              ||||||||||||||  ||||||||||||
Sbjct: 214076 caaccccatcaacaggattatttggttc 214103

 Score = 32.2 bits (16), Expect(9) = 0.22
 Identities = 16/16 (100%)
 Strand = Plus / Plus


Query: 869    tggattatttggttcc 884
              ||||||||||||||||
Sbjct: 244788 tggattatttggttcc 244803

 Score = 30.2 bits (15), Expect(9) = 0.22
 Identities = 15/15 (100%)
 Strand = Plus / Plus


Query: 267    tcattattttcatca 281
              |||||||||||||||
Sbjct: 211908 tcattattttcatca 211922

 Score = 30.2 bits (15), Expect(9) = 0.22
 Identities = 15/15 (100%)
 Strand = Plus / Plus


Query: 459    agtttatttggaaca 473
              |||||||||||||||
Sbjct: 213235 agtttatttggaaca 213249

 Score = 30.2 bits (15), Expect(9) = 0.22
 Identities = 15/15 (100%)
 Strand = Plus / Plus


Query: 526    caacaacaccatcaa 540
              |||||||||||||||
Sbjct: 213743 caacaacaccatcaa 213757

 Score = 30.2 bits (15), Expect(9) = 0.22
 Identities = 21/23 (91%)
 Strand = Plus / Plus


Query: 543    ttatttggaacaacaacaacatc 565
              ||||||||  |||||||||||||
Sbjct: 214021 ttatttggttcaacaacaacatc 214043

 Score = 28.2 bits (14), Expect(9) = 0.22
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 777    actacaccatcgac 790
              ||||||||||||||
Sbjct: 214270 actacaccatcgac 214283

 Score = 26.3 bits (13), Expect(9) = 0.22
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 250    caacaacatcaac 262
              |||||||||||||
Sbjct: 194032 caacaacatcaac 194044

 Score = 26.3 bits (13), Expect(9) = 0.22
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 790    catcatcttcaac 802
              |||||||||||||
Sbjct: 214796 catcatcttcaac 214808

 Score = 46.1 bits (23), Expect = 2.6
 Identities = 59/71 (83%)
 Strand = Plus / Plus


Query: 822    ccatctactggattgtttggtgcttcatcatctacaaccccatcaactggattatttggt 881
              |||||||| ||||| |||||  || || || | |||| ||||||||| ||||||||||||
Sbjct: 214186 ccatctacaggattatttggatctacaacagcaacaaacccatcaacaggattatttggt 214245


Query: 882    tccgcaacaac 892
              ||  |||||||
Sbjct: 214246 tcaacaacaac 214256

 Score = 46.1 bits (23), Expect = 2.6
 Identities = 35/39 (89%)
 Strand = Plus / Plus


Query: 749    cccatcaacatcattatttggttcaacaactacaccatc 787
              ||||||||||  |||||||||||||||||| ||| ||||
Sbjct: 214224 cccatcaacaggattatttggttcaacaacaacaacatc 214262

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 965,320,969
Number of extensions: 62783818
Number of successful extensions: 6760986
Number of sequences better than 10.0: 414
Length of query: 1025
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1001
Effective length of database: 97,308,875,965
Effective search space: 97406184840965
Effective search space used: 97406184840965
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

Query= Contig-U13509-1 (Contig-U13509-1Q) /CSM_Contig/Contig-U13509-1Q.Seq.d
         (1025 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116957_76(AC116957|pid:none) Dictyostelium discoideum chromoso...    40   0.10
(Q555D2) RecName: Full=Uncharacterized protein DDB_G0274915;           40   0.10

>AC116957_76(AC116957|pid:none) Dictyostelium discoideum chromosome 2
            map 1685067-2090751 strain AX4, complete sequence.
          Length = 1806

 Score = 40.4 bits (93), Expect = 0.10
 Identities = 22/44 (50%), Positives = 22/44 (50%)
 Frame = +3

Query: 156  EKIDDKPXXXXXXXXXXXXXXXXXXXXXXNPSTTSTGSLFSSNP 287
            EKIDDKP                      NPSTTSTGSLFSSNP
Sbjct: 1031 EKIDDKPSTTTTTTTTSLFGSTTTSGLFSNPSTTSTGSLFSSNP 1074

 Score = 38.9 bits (89), Expect = 0.29
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +3

Query: 843  ASSSTTPSTGLFGSATTP 896
            ASSSTTPSTGLFGSATTP
Sbjct: 1260 ASSSTTPSTGLFGSATTP 1277

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 698,237,762
Number of extensions: 6768160
Number of successful extensions: 12579
Number of sequences better than 10.0: 2
Number of HSP's gapped: 12573
Number of HSP's successfully gapped: 4
Length of query: 341
Length of database: 1,051,180,864
Length adjustment: 129
Effective length of query: 212
Effective length of database: 633,664,753
Effective search space: 134336927636
Effective search space used: 134336927636
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

 psg: 0.36  gvh: 0.39  alm: 0.49  top: 0.53  tms: 0.00  mit: 0.19  mip: 0.00
 nuc: 0.16  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 60.0 %: nuclear
	 32.0 %: cytoplasmic
	  4.0 %: cytoskeletal
	  4.0 %: mitochondrial

>> prediction for Contig-U13509-1 is nuc