>Contig-U13443-1 (Contig-U13443-1Q) /CSM_Contig/Contig-U13443-1Q.Seq.d
AATTTTTATATTTTTTTTAACACACACTTTTTTATACATATAATATAGTT
TTTAGTTTTTATAATTTGTTTTTTTTTTTTTATAATAATTAAATAGAGTA
AAAAAAAAAAGTATATATATATTTAAATTTTATTTAAATGGGTAGTCCAA
CTATTAGTGATCAAGAAAAATCCCAAGTTGCCTTTATAGCAGGTAGTAGT
TCTGATATTCATTCAACTACTGTTGCAAGATTGTATGAAGGTAGACAAGG
AAGATGGGAATTTATGGCCGTCGGTATTGTTTCTGTTGTTTCAAATCGTG
TAGATAAAACAAATTATATCAAAGTTTTCGATTTAAAGGCCAACTACAGA
ATCATTTTTGAACAAGAAATTTATGACACTTTTGAATTTCAAAAACAAAG
AGATTTCTTTTTTTGCATTTGAAGGTGATTCCTGTGTTTATGGCTTATCA
TTTGCTGATGTAACTGAAGCAGCTGAATTCTATGGCCAACTTTTAAATTG
TAAACAAGGAAATATTGGTAAAACTGCTGCAATTAATCCAAATACTTCTT
CAACCAAAATTACTGCATCAACACCAGCACCAAAAGTTGAAAAGAAAAAA
GAAAAGAAAGGTTTTATGTCTAAATTCTTTTCATCGGAAGAGAAAGATTT
GGAAATTTCAGCTCCAACCAACTTTAAACATGAAAGTCATATTGGTTGGG
ATCCAGAGAATGGTTTTGATATTAAGAATATCCCACCAGATTGGAGAAAA
CTTTTCCAATCTGCTGGTATTAAGAAGAGTGAATTAAAGAATGCAGAAAC
TGCTCAATTCATTGTCAATATCATTGGTGAACAAATGGTTGGTGGTTCAG
CTCCACCACCAACTCAACCAGGTAGATCAGCTCCACCAGCTCCACCATCT
TCAAACCAACCAGGTAGATCAGCTCCACCACCACCACCATCTGTTGGTAA
AAGTGCTCCACCACCACCACCACCATCCCATAAGACACCTGCAGCTCCAC
CATCAGGCGGAGGTGCTCCACCCACCACCACCACCTCCACCACCACCTTC
TAGTGGTCCACCACCTCCACCACCACCAATGGCCAGTGCTCCTCCATCAT
CAGGAGGTGGTGGTGCCAGCGGCGGTGGAAGAAATGATCTTTTGGCTTCC
ATTCGTAGTGGTGCAAGTCTTAAGGCTGTTGATAAAACCAATCCACTCCC
AGATATTCAAAGTCTTGGTAATGAAGGTTCACGTTCTTTAGCTGATACTT
TAGCTGCAGCTATGGCTAATCGTAGAGGTGGTATGAGAGAAGATGATGAA
GAAGATGATGATGACGATGATGAATGGTCAGCATTATTAAATTATTCTTT
AACAAAATTCAAATTCAAAAAAATCATTAAATAAAGATTTCTTTATTTCT
TTCACCAAAAA

est1=SFK712F,1,108
est2=VFE551F,2,146
est3=CFG253F,6,112
est4=AFC562F,8,132
est5=SFJ169F,8,111
est6=SFJ736F,8,110
est7=SSL103F,10,598
est8=AFD686F,19,127
est9=VSJ735Z,54,582
est10=AFG687F,84,659
est11=CFG349F,165,606
est12=SFG565F,324,942
est13=VSC304Z,549,1133
est14=VFN644Z,722,1387
est15=SHE721E,737,1393
est16=AFG687Z,749,1389
est17=SLH341Z,758,1405
est18=SFC807Z,784,1386
est19=VFA863Z,821,1390
est20=CFG349Z,951,1387
est21=SSG705E,958,1411
est22=SLH135Z,963,1409
est23=CFG253Z,967,1391
est24=SFK712Z,1011,1385
est25=AFF743Z,1014,1373
est26=SFC789Z,1015,1237
est27=AFC232Z,1016,1384
est28=SFJ736Z,1020,1314
est29=SFF823Z,1021,1388
est30=VFD730Z,1021,1391
est31=SFG565Z,1022,1391
est32=CFC194Z,1028,1296
est33=AFC562Z,1080,1389
est34=AFE360Z,1083,1390
est35=AFD686Z,1096,1310
est36=VFE551Z,1123,1307

nfyiffnthffihii*flvfiicffffiiik*skkkkyiyi*ilfkwvvqllvikknpkl
pl*qvvvlifiqlllqdcmkvdkedgnlwpsvlfllfqiv*ikqiiskfsi*RPTTESFL
NKKFMTLLNFKNKEISFFAFEGDSCVYGLSFADVTEAAEFYGQLLNCKQGNIGKTAAINP
NTSSTKITASTPAPKVEKKKEKKGFMSKFFSSEEKDLEISAPTNFKHESHIGWDPENGFD
IKNIPPDWRKLFQSAGIKKSELKNAETAQFIVNIIGEQMVGGSAPPPTQPGRSAPPAPPS
SNQPGRSAPPPPPSVGKSAPPPPPPSHKTPAAPPSGGGAPPTTTTSTTTF*wsttstttn
gqcssiirrwwcqrrwkk*sfgfhs*wcks*gc**nqstprysksw**rftffs*yfscs
yg*s*rwyerr**rr***r**mvsiiklffnkiqiqknh*ikislflspk

Frame A:
nfyiffnthffihii*flvfiicffffiiik*skkkkyiyi*ilfkwvvqllvikknpkl
pl*qvvvlifiqlllqdcmkvdkedgnlwpsvlfllfqiv*ikqiiskfsi*RPTTESFL
NKKFMTLLNFKNKEISFFAFEGDSCVYGLSFADVTEAAEFYGQLLNCKQGNIGKTAAINP
NTSSTKITASTPAPKVEKKKEKKGFMSKFFSSEEKDLEISAPTNFKHESHIGWDPENGFD
IKNIPPDWRKLFQSAGIKKSELKNAETAQFIVNIIGEQMVGGSAPPPTQPGRSAPPAPPS
SNQPGRSAPPPPPSVGKSAPPPPPPSHKTPAAPPSGGGAPPTTTTSTTTF*wsttstttn
gqcssiirrwwcqrrwkk*sfgfhs*wcks*gc**nqstprysksw**rftffs*yfscs
yg*s*rwyerr**rr***r**mvsiiklffnkiqiqknh*ikislflspk


Frame B:
ififflthtflyi*ysf*fl*fvfffl**lnrvkkksiyifkfylng*sny**srkipsc
lysr**f*ysfnycckiv*r*trkmgiygrrycfccfkscr*nklyqsfrfkgqlqnhf*
trnl*hf*isktkrflflhlkvipvfmayhllm*lkqlnsmanf*ivnkeilvkllqliq
illqpkllhqhqhqklkrkkkrkvlclnsfhrkrkiwkfqlqptlnmkvilvgiqrmvli
lrishqigenfsnllvlrrvn*rmqkllnslsislvnkwlvvqlhhqlnqvdqlhqlhhl
qtnqvdqlhhhhhllvkvlhhhhhhpirhlqlhhqaevlhpppppppppssgpppppppm
asappssggggasgggrndllasirsgaslkavdktnplpdiqslgnegsrsladtlaaa
manrrggmreddeeddddddewsallnysltkfkfkkiik*rflyffhqk


Frame C:
flyff*htlfytynivfsfynlffffynn*ie*kkkvyiylnfi*mgsptisdqeksqva
fiagsssdihsttvarlyegrqgrwefmavgivsvvsnrvdktnyikvfdlkanyriife
qeiydtfefqkqrdfffci*r*flclwliic*cn*ss*ilwptfkl*trkyw*nccn*sk
yffnqnycintstks*kekrkerfyv*ilfigrerfgnfssnql*t*ksywlgsrewf*y
*eyptrlektfpicwy*ee*ikecrncsihcqyhw*tngwwfssttnstr*isstsstif
kptr*isstttticw*kcstttttip*dtcsstirrrcsthhhhlhhhllvvhhlhhhqw
pvllhhqevvvpaaveemifwlpfvvvqvlrllikpihsqifkvlvmkvhvl*lil*lql
wlivevv*ekmmkkmmmtmmngqhy*iil*qnsnskkslnkdffisftk

Query= Contig-U13443-1 (Contig-U13443-1Q)
/CSM_Contig/Contig-U13443-1Q.Seq.d
         (1411 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U13443-1 (Contig-U13443-1Q) /CSM_Contig/Conti...   892  0.0
Contig-U10485-1 (Contig-U10485-1Q) /CSM_Contig/Conti...    38  0.025
Contig-U05179-1 (Contig-U05179-1Q) /CSM_Contig/Conti...    38  0.025
Contig-U04927-1 (Contig-U04927-1Q) /CSM_Contig/Conti...    38  0.025
Contig-U14355-1 (Contig-U14355-1Q) /CSM_Contig/Conti...    36  0.10
Contig-U13264-1 (Contig-U13264-1Q) /CSM_Contig/Conti...    36  0.10
Contig-U12378-1 (Contig-U12378-1Q) /CSM_Contig/Conti...    36  0.10
Contig-U12257-1 (Contig-U12257-1Q) /CSM_Contig/Conti...    36  0.10
Contig-U11482-1 (Contig-U11482-1Q) /CSM_Contig/Conti...    36  0.10
Contig-U11181-1 (Contig-U11181-1Q) /CSM_Contig/Conti...    36  0.10

>Contig-U13443-1 (Contig-U13443-1Q) /CSM_Contig/Contig-U13443-1Q.Seq.d
          Length = 1411

 Score =  892 bits (450), Expect = 0.0
 Identities = 464/471 (98%)
 Strand = Plus / Plus

                                                                       
Query: 111 gtatatatatatttaaattttatttaaatgggtagtccaactattagtgatcaagaaaaa 170
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 gtatatatatatttaaattttatttaaatgggtagtccaactattagtgatcaagaaaaa 170

                                                                       
Query: 171 tcccaagttgcctttatagcaggtagtagttctgatattcattcaactactgttgcaaga 230
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 tcccaagttgcctttatagcaggtagtagttctgatattcattcaactactgttgcaaga 230

                                                                       
Query: 231 ttgtatgaaggtagacaaggaagatgggaatttatggccgtcggtattgtttctgttgtt 290
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ttgtatgaaggtagacaaggaagatgggaatttatggccgtcggtattgtttctgttgtt 290

                                                                       
Query: 291 tcaaatcgtgtagataaaacaaattatatcaaagttttcgatttaaaggccaactacaga 350
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tcaaatcgtgtagataaaacaaattatatcaaagttttcgatttaaaggccaactacaga 350

                                                                       
Query: 351 atcatttttgaacaagaaatttatgacacttttgaatttcaaaaacaaagagatttcnnn 410
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct: 351 atcatttttgaacaagaaatttatgacacttttgaatttcaaaaacaaagagatttcttt 410

                                                                       
Query: 411 nnnngcatttgaaggtgattcctgtgtttatggcttatcatttgctgatgtaactgaagc 470
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ttttgcatttgaaggtgattcctgtgtttatggcttatcatttgctgatgtaactgaagc 470

                                                                       
Query: 471 agctgaattctatggccaacttttaaattgtaaacaaggaaatattggtaaaactgctgc 530
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 agctgaattctatggccaacttttaaattgtaaacaaggaaatattggtaaaactgctgc 530

                                                              
Query: 531 aattaatccaaatacttcttcaaccaaaattactgcatcaacaccagcacc 581
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 aattaatccaaatacttcttcaaccaaaattactgcatcaacaccagcacc 581


 Score =  626 bits (316), Expect = e-179
 Identities = 316/316 (100%)
 Strand = Plus / Plus

                                                                       
Query: 610 ggttttatgtctaaattcttttcatcggaagagaaagatttggaaatttcagctccaacc 669
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ggttttatgtctaaattcttttcatcggaagagaaagatttggaaatttcagctccaacc 669

                                                                       
Query: 670 aactttaaacatgaaagtcatattggttgggatccagagaatggttttgatattaagaat 729
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 aactttaaacatgaaagtcatattggttgggatccagagaatggttttgatattaagaat 729

                                                                       
Query: 730 atcccaccagattggagaaaacttttccaatctgctggtattaagaagagtgaattaaag 789
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 atcccaccagattggagaaaacttttccaatctgctggtattaagaagagtgaattaaag 789

                                                                       
Query: 790 aatgcagaaactgctcaattcattgtcaatatcattggtgaacaaatggttggtggttca 849
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 aatgcagaaactgctcaattcattgtcaatatcattggtgaacaaatggttggtggttca 849

                                                                       
Query: 850 gctccaccaccaactcaaccaggtagatcagctccaccagctccaccatcttcaaaccaa 909
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 gctccaccaccaactcaaccaggtagatcagctccaccagctccaccatcttcaaaccaa 909

                           
Query: 910 ccaggtagatcagctc 925
           ||||||||||||||||
Sbjct: 910 ccaggtagatcagctc 925


 Score =  402 bits (203), Expect = e-112
 Identities = 203/203 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1079 atggccagtgctcctccatcatcaggaggtggtggtgccagcggcggtggaagaaatgat 1138
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1079 atggccagtgctcctccatcatcaggaggtggtggtgccagcggcggtggaagaaatgat 1138

                                                                        
Query: 1139 cttttggcttccattcgtagtggtgcaagtcttaaggctgttgataaaaccaatccactc 1198
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1139 cttttggcttccattcgtagtggtgcaagtcttaaggctgttgataaaaccaatccactc 1198

                                                                        
Query: 1199 ccagatattcaaagtcttggtaatgaaggttcacgttctttagctgatactttagctgca 1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1199 ccagatattcaaagtcttggtaatgaaggttcacgttctttagctgatactttagctgca 1258

                                   
Query: 1259 gctatggctaatcgtagaggtgg 1281
            |||||||||||||||||||||||
Sbjct: 1259 gctatggctaatcgtagaggtgg 1281


 Score =  127 bits (64), Expect = 4e-29
 Identities = 78/85 (91%)
 Strand = Plus / Plus

                                                                        
Query: 1327 gtcagcattattaaattattctttaacaaaattcaaattcnnnnnnntcattaaataaag 1386
            ||||||||||||||||||||||||||||||||||||||||       |||||||||||||
Sbjct: 1327 gtcagcattattaaattattctttaacaaaattcaaattcaaaaaaatcattaaataaag 1386

                                     
Query: 1387 atttctttatttctttcaccaaaaa 1411
            |||||||||||||||||||||||||
Sbjct: 1387 atttctttatttctttcaccaaaaa 1411


 Score = 79.8 bits (40), Expect = 7e-15
 Identities = 40/40 (100%)
 Strand = Plus / Plus

                                                    
Query: 976  tcccataagacacctgcagctccaccatcaggcggaggtg 1015
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 976  tcccataagacacctgcagctccaccatcaggcggaggtg 1015


 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                               
Query: 865 caaccaggtagatcagctccaccagctccaccatct 900
           |||||||||||||||||||||||| | |||||||||
Sbjct: 907 caaccaggtagatcagctccaccaccaccaccatct 942


 Score = 30.2 bits (15), Expect = 6.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 847 tcagctccaccacca 861
           |||||||||||||||
Sbjct: 919 tcagctccaccacca 933


>Contig-U10485-1 (Contig-U10485-1Q) /CSM_Contig/Contig-U10485-1Q.Seq.d
          Length = 1124

 Score = 38.2 bits (19), Expect = 0.025
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 781 gaattaaagaatgcagaaa 799
           |||||||||||||||||||
Sbjct: 230 gaattaaagaatgcagaaa 248


>Contig-U05179-1 (Contig-U05179-1Q) /CSM_Contig/Contig-U05179-1Q.Seq.d
          Length = 1122

 Score = 38.2 bits (19), Expect = 0.025
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 120 tatttaaattttatttaaa 138
           |||||||||||||||||||
Sbjct: 111 tatttaaattttatttaaa 129


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,636
Number of Sequences: 6905
Number of extensions: 16636
Number of successful extensions: 1912
Number of sequences better than 10.0: 231
length of query: 1411
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1395
effective length of database: 5,564,391
effective search space: 7762325445
effective search space used: 7762325445
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

Query= Contig-U13443-1 (Contig-U13443-1Q) /CSM_Contig/Contig-U13443-1Q.Seq.d
         (1411 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AF305060) Dictyostelium discoideum Wiscott-Aldrich syndrome...   529   0.0    10
(BJ390978) Dictyostelium discoideum cDNA clone:dds14a17, 5' ...   529   0.0    3
(BJ325511) Dictyostelium discoideum cDNA clone:dda14m22, 5' ...   577   0.0    4
(BJ435781) Dictyostelium discoideum cDNA clone:ddv28g12, 3' ...   404   0.0    5
(AU270389) Dictyostelium discoideum vegetative cDNA clone:VS...   529   0.0    2
(AU039281) Dictyostelium discoideum slug cDNA, clone SLH341.      404   0.0    5
(BJ393918) Dictyostelium discoideum cDNA clone:dds33j05, 5' ...   404   0.0    5
(BJ405823) Dictyostelium discoideum cDNA clone:dds33j05, 3' ...   404   0.0    5
(BJ359233) Dictyostelium discoideum cDNA clone:ddc13b13, 5' ...   420   0.0    2
(AU262462) Dictyostelium discoideum vegetative cDNA clone:VS...   529   0.0    4
(BJ342636) Dictyostelium discoideum cDNA clone:dda14m22, 3' ...   404   0.0    5
(BJ399481) Dictyostelium discoideum cDNA clone:dds6n02, 3' e...   404   e-158  5
(C89964) Dictyostelium discoideum slug cDNA, clone SSG705.        404   e-151  4
(AU039202) Dictyostelium discoideum slug cDNA, clone SLH135.      404   e-150  4
(BJ372664) Dictyostelium discoideum cDNA clone:ddc13i14, 3' ...   404   e-126  5
(BJ372637) Dictyostelium discoideum cDNA clone:ddc13b13, 3' ...   404   e-125  3
(BJ401083) Dictyostelium discoideum cDNA clone:dds22h03, 3' ...   404   e-124  3
(BJ347276) Dictyostelium discoideum cDNA clone:dda26j18, 3' ...   404   e-124  3
(BJ341152) Dictyostelium discoideum cDNA clone:dda5o08, 3' e...   404   e-124  2
(BJ430702) Dictyostelium discoideum cDNA clone:ddv8l07, 3' e...   404   e-123  3
(BJ398370) Dictyostelium discoideum cDNA clone:dds12n06, 3' ...   404   e-123  3
(BJ400723) Dictyostelium discoideum cDNA clone:dds14a17, 3' ...   396   e-122  3
(BJ342117) Dictyostelium discoideum cDNA clone:dda9h15, 3' e...   394   e-121  3
(BJ429201) Dictyostelium discoideum cDNA clone:ddv2n16, 3' e...   404   e-120  4
(BJ341434) Dictyostelium discoideum cDNA clone:dda6k15, 3' e...   371   e-110  3
(BJ340255) Dictyostelium discoideum cDNA clone:dda12f11, 3' ...   404   e-108  2
(BJ402063) Dictyostelium discoideum cDNA clone:dds20h09, 3' ...   404   e-108  1
(BJ374019) Dictyostelium discoideum cDNA clone:ddc5k23, 3' e...   404   e-108  1
(BJ341950) Dictyostelium discoideum cDNA clone:dda8k22, 3' e...   329   2e-85  1
(BJ428036) Dictyostelium discoideum cDNA clone:ddv10e13, 3' ...   303   1e-77  1
(AU074492) Dictyostelium discoideum slug cDNA, clone SSL103.      276   5e-74  2
(BJ399625) Dictyostelium discoideum cDNA clone:dds6b23, 3' e...   202   4e-63  3
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568...    70   2e-08  6
(BJ409918) Dictyostelium discoideum cDNA clone:ddv10e13, 5' ...    48   4e-06  2
(CN563418) taf88c11.x2 Hydra EST -Kiel 1 Hydra magnipapillat...    52   0.059  1
(CN563408) taf88b02.x2 Hydra EST -Kiel 1 Hydra magnipapillat...    52   0.059  1
(CN563059) taf82f04.x2 Hydra EST -Kiel 1 Hydra magnipapillat...    52   0.059  1
(BX908387) Zebrafish DNA sequence from clone DKEY-45B6 in li...    50   0.23   1
(BX569789) Zebrafish DNA sequence from clone DKEY-68O6 in li...    50   0.23   1
(AC006250) Arabidopsis thaliana chromosome 2 clone T6A13 map...    50   0.23   1
(AR670188) Sequence 11 from patent US 6900306.                     50   0.23   1
(AL035476) Plasmodium falciparum MAL4P3.                           50   0.23   1
(AL136293) Human chromosome 14 DNA sequence BAC C-2555C10 of...    50   0.23   1
(AC217786) Homo sapiens FOSMID clone ABC13-48591800F23 from ...    50   0.23   1
(AC156177) Bos taurus clone CH240-52B22, WORKING DRAFT SEQUE...    50   0.23   1
(CU856173) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    50   0.23   1
(CU462849) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    50   0.23   1
(CR790370) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    50   0.23   1
(AC222110) Bos taurus clone CH240-371H19, WORKING DRAFT SEQU...    50   0.23   1
(AC220684) Bos taurus clone CH240-349L14, WORKING DRAFT SEQU...    50   0.23   1
(AC185862) Bos taurus clone RP42-93G12, WORKING DRAFT SEQUEN...    50   0.23   1
(AC185824) Bos taurus clone RP42-178I10, WORKING DRAFT SEQUE...    50   0.23   1
(AC173164) Bos taurus clone CH240-164L20, WORKING DRAFT SEQU...    50   0.23   1
(AC166000) Callithrix jacchus clone CH259-210B18, WORKING DR...    50   0.23   1
(BZ504492) BONFQ63TF BO_1.6_2_KB_tot Brassica oleracea genom...    50   0.23   1
(BH587033) BOHPB95TR BOHP Brassica oleracea genomic clone BO...    50   0.23   1
(BQ258443) fz79g06.y1 Sugano SJD adult male Danio rerio cDNA...    50   0.23   1
(AC104134) Homo sapiens BAC clone RP11-525L16 from 2, comple...    46   0.37   5
(AP004625) Lotus japonicus genomic DNA, chromosome 5, clone:...    38   0.51   2
(DE261308) Oryzias latipes DNA, clone: ola1-148I01.F, genomi...    38   0.66   2
(DH199974) Oryzias latipes Fosmid clone:GOLWFno491_c09, reve...    38   0.67   2
(AC157149) Bos taurus clone CH240-67G13, WORKING DRAFT SEQUE...    48   0.91   2
(CR385035) Zebrafish DNA sequence from clone DKEY-182I1 in l...    48   0.91   1
(BC122929) Xenopus tropicalis cDNA clone IMAGE:7685974.            48   0.91   1
(AM459740) Vitis vinifera contig VV78X120395.27, whole genom...    48   0.91   1
(AL929359) Plasmodium falciparum strain 3D7, chromosome 9; s...    48   0.91   1
(AE001391) Plasmodium falciparum 3D7 chromosome 2 section 28...    48   0.91   1
(AC119035) Homo sapiens 3 BAC RP11-445E17 (Roswell Park Canc...    48   0.91   1
(AC117461) Homo sapiens 3 BAC RP11-346H19 (Roswell Park Canc...    48   0.91   1
(AC092718) Homo sapiens chromosome 16 clone RP11-303E16, com...    48   0.91   1
(AC009079) Homo sapiens chromosome 16 clone RP11-340B7, comp...    48   0.91   1
(AC161893) Bos taurus clone CH240-114F21, WORKING DRAFT SEQU...    48   0.91   1
(AC160092) Bos taurus clone CH240-81H21, WORKING DRAFT SEQUE...    48   0.91   1
(AC156154) Bos taurus clone CH240-46P3, WORKING DRAFT SEQUEN...    48   0.91   1
(CU861543) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    48   0.91   1
(AC084362) Homo sapiens chromosome 12q clone RP11-406C14, WO...    48   0.91   1
(CU407334) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    48   0.91   1
(CR855129) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    48   0.91   1
(AC231683) Mustela putorius furo clone CH237-524M18, WORKING...    48   0.91   1
(AC229612) Mustela putorius furo clone CH237-505N19, WORKING...    48   0.91   1
(AC226240) Zea mays chromosome 4 clone CH201-175I9; ZMMBBc01...    48   0.91   1
(AC224476) Bos taurus clone CH240-483M1, WORKING DRAFT SEQUE...    48   0.91   1
(AC216193) Zea mays chromosome 4 clone ZMMBBb-629P6; ZMMBBb0...    48   0.91   1
(AC182314) Bos taurus clone CH240-515F10, WORKING DRAFT SEQU...    48   0.91   1
(FH330002) CHO_OF4569xg12r1.ab1 CHO_OF4 Nicotiana tabacum ge...    48   0.91   1
(FH329922) CHO_OF4569xg12f1.ab1 CHO_OF4 Nicotiana tabacum ge...    48   0.91   1
(EJ637157) 1093005301071 Global-Ocean-Sampling_GS-29-01-01-1...    48   0.91   1
(EJ636217) 1092995301516 Global-Ocean-Sampling_GS-29-01-01-1...    48   0.91   1
(EJ608816) 1092962028187 Global-Ocean-Sampling_GS-29-01-01-1...    48   0.91   1
(EI368773) POTBR84TR Solanum tuberosum RHPOTKEY BAC ends Sol...    48   0.91   1
(DU808867) OG_ABa0093C08.r OG_ABa Oryza granulata genomic cl...    48   0.91   1
(CC400957) PUHOA23TD ZM_0.6_1.0_KB Zea mays genomic clone ZM...    48   0.91   1
(BZ698223) PUCDB83TD ZM_0.6_1.0_KB Zea mays genomic clone ZM...    48   0.91   1
(BH972106) odj33g03.b1 B.oleracea002 Brassica oleracea genom...    48   0.91   1
(ES684276) CCAX7717.g1 NICHD_XGC_tropEye1 Xenopus (Silurana)...    48   0.91   1
(EL714636) CBSU9900.rev NICHD_XGC_tropLimb_m Xenopus (Silura...    48   0.91   1
(DR861678) JGI_CABG6438.rev NIH_XGC_tropSto1 Xenopus (Silura...    48   0.91   1
(DR836046) JGI_CABC6042.rev NIH_XGC_tropFat1 Xenopus (Silura...    48   0.91   1
(CX983425) JGI_CAAP13532.rev NIH_XGC_tropInt1 Xenopus (Silur...    48   0.91   1
(CX941293) JGI_CAAO7602.rev NIH_XGC_tropTe5 Xenopus (Siluran...    48   0.91   1

>(AF305060) Dictyostelium discoideum Wiscott-Aldrich syndrome protein
            (wasA) gene, complete cds.
          Length = 1741

 Score =  529 bits (267), Expect(10) = 0.0
 Identities = 267/267 (100%)
 Strand = Plus / Plus


Query: 611  gttttatgtctaaattcttttcatcggaagagaaagatttggaaatttcagctccaacca 670
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933  gttttatgtctaaattcttttcatcggaagagaaagatttggaaatttcagctccaacca 992


Query: 671  actttaaacatgaaagtcatattggttgggatccagagaatggttttgatattaagaata 730
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993  actttaaacatgaaagtcatattggttgggatccagagaatggttttgatattaagaata 1052


Query: 731  tcccaccagattggagaaaacttttccaatctgctggtattaagaagagtgaattaaaga 790
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 tcccaccagattggagaaaacttttccaatctgctggtattaagaagagtgaattaaaga 1112


Query: 791  atgcagaaactgctcaattcattgtcaatatcattggtgaacaaatggttggtggttcag 850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1113 atgcagaaactgctcaattcattgtcaatatcattggtgaacaaatggttggtggttcag 1172


Query: 851  ctccaccaccaactcaaccaggtagat 877
            |||||||||||||||||||||||||||
Sbjct: 1173 ctccaccaccaactcaaccaggtagat 1199

 Score =  454 bits (229), Expect(10) = 0.0
 Identities = 229/229 (100%)
 Strand = Plus / Plus


Query: 111 gtatatatatatttaaattttatttaaatgggtagtccaactattagtgatcaagaaaaa 170
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gtatatatatatttaaattttatttaaatgggtagtccaactattagtgatcaagaaaaa 285


Query: 171 tcccaagttgcctttatagcaggtagtagttctgatattcattcaactactgttgcaaga 230
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 tcccaagttgcctttatagcaggtagtagttctgatattcattcaactactgttgcaaga 345


Query: 231 ttgtatgaaggtagacaaggaagatgggaatttatggccgtcggtattgtttctgttgtt 290
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ttgtatgaaggtagacaaggaagatgggaatttatggccgtcggtattgtttctgttgtt 405


Query: 291 tcaaatcgtgtagataaaacaaattatatcaaagttttcgatttaaagg 339
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tcaaatcgtgtagataaaacaaattatatcaaagttttcgatttaaagg 454

 Score =  404 bits (204), Expect(10) = 0.0
 Identities = 204/204 (100%)
 Strand = Plus / Plus


Query: 1079 atggccagtgctcctccatcatcaggaggtggtggtgccagcggcggtggaagaaatgat 1138
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1400 atggccagtgctcctccatcatcaggaggtggtggtgccagcggcggtggaagaaatgat 1459


Query: 1139 cttttggcttccattcgtagtggtgcaagtcttaaggctgttgataaaaccaatccactc 1198
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1460 cttttggcttccattcgtagtggtgcaagtcttaaggctgttgataaaaccaatccactc 1519


Query: 1199 ccagatattcaaagtcttggtaatgaaggttcacgttctttagctgatactttagctgca 1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1520 ccagatattcaaagtcttggtaatgaaggttcacgttctttagctgatactttagctgca 1579


Query: 1259 gctatggctaatcgtagaggtggt 1282
            ||||||||||||||||||||||||
Sbjct: 1580 gctatggctaatcgtagaggtggt 1603

 Score =  281 bits (142), Expect(10) = 0.0
 Identities = 142/142 (100%)
 Strand = Plus / Plus


Query: 415 gcatttgaaggtgattcctgtgtttatggcttatcatttgctgatgtaactgaagcagct 474
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gcatttgaaggtgattcctgtgtttatggcttatcatttgctgatgtaactgaagcagct 710


Query: 475 gaattctatggccaacttttaaattgtaaacaaggaaatattggtaaaactgctgcaatt 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 gaattctatggccaacttttaaattgtaaacaaggaaatattggtaaaactgctgcaatt 770


Query: 535 aatccaaatacttcttcaacca 556
           ||||||||||||||||||||||
Sbjct: 771 aatccaaatacttcttcaacca 792

 Score =  145 bits (73), Expect(10) = 0.0
 Identities = 73/73 (100%)
 Strand = Plus / Plus


Query: 335 aaaggccaactacagaatcatttttgaacaagaaatttatgacacttttgaatttcaaaa 394
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aaaggccaactacagaatcatttttgaacaagaaatttatgacacttttgaatttcaaaa 631


Query: 395 acaaagagatttc 407
           |||||||||||||
Sbjct: 632 acaaagagatttc 644

 Score = 75.8 bits (38), Expect(10) = 0.0
 Identities = 38/38 (100%)
 Strand = Plus / Plus


Query: 1374 tcattaaataaagatttctttatttctttcaccaaaaa 1411
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 1694 tcattaaataaagatttctttatttctttcaccaaaaa 1731

 Score = 73.8 bits (37), Expect(10) = 0.0
 Identities = 37/37 (100%)
 Strand = Plus / Plus


Query: 981  taagacacctgcagctccaccatcaggcggaggtgct 1017
            |||||||||||||||||||||||||||||||||||||
Sbjct: 1303 taagacacctgcagctccaccatcaggcggaggtgct 1339

 Score = 67.9 bits (34), Expect(10) = 0.0
 Identities = 34/34 (100%)
 Strand = Plus / Plus


Query: 1333 attattaaattattctttaacaaaattcaaattc 1366
            ||||||||||||||||||||||||||||||||||
Sbjct: 1653 attattaaattattctttaacaaaattcaaattc 1686

 Score = 50.1 bits (25), Expect(10) = 0.0
 Identities = 25/25 (100%)
 Strand = Plus / Plus


Query: 557 aaattactgcatcaacaccagcacc 581
           |||||||||||||||||||||||||
Sbjct: 879 aaattactgcatcaacaccagcacc 903

 Score = 36.2 bits (18), Expect(10) = 0.0
 Identities = 18/18 (100%)
 Strand = Plus / Plus


Query: 82  ataataattaaatagagt 99
           ||||||||||||||||||
Sbjct: 197 ataataattaaatagagt 214

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,404,228,644
Number of extensions: 117932911
Number of successful extensions: 8226604
Number of sequences better than 10.0: 199
Length of query: 1411
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1387
Effective length of database: 97,308,875,965
Effective search space: 134967410963455
Effective search space used: 134967410963455
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

Query= Contig-U13443-1 (Contig-U13443-1Q) /CSM_Contig/Contig-U13443-1Q.Seq.d
         (1411 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF305060_1(AF305060|pid:none) Dictyostelium discoideum Wiscott-A...   254   e-113
AC117076_18(AC117076|pid:none) Dictyostelium discoideum chromoso...   107   8e-22
DQ985464_1(DQ985464|pid:none) Suberites domuncula Wiskott-Aldric...    70   1e-18
BC066424_1(BC066424|pid:none) Danio rerio Wiskott-Aldrich syndro...    78   2e-18
BC070812_1(BC070812|pid:none) Xenopus laevis hypothetical protei...    71   9e-16
BT059346_1(BT059346|pid:none) Salmo salar clone ssal-rgf-509-129...    65   3e-14
(P42768) RecName: Full=Wiskott-Aldrich syndrome protein;        ...    79   5e-13
AX167535_1(AX167535|pid:none) Sequence 35 from Patent WO0144292....    79   5e-13
AF115549_1(AF115549|pid:none) Homo sapiens Wiskott-Aldrich Syndr...    79   5e-13
BC158677_1(BC158677|pid:none) Rattus norvegicus Wiskott-Aldrich ...    79   5e-13
(P70315) RecName: Full=Wiskott-Aldrich syndrome protein homolog;...    79   5e-13
BC087802_1(BC087802|pid:none) Xenopus tropicalis Wiskott-Aldrich...    75   8e-12
BC129739_1(BC129739|pid:none) Xenopus laevis hypothetical protei...    75   8e-12
BC158507_1(BC158507|pid:none) Xenopus tropicalis Wiskott-Aldrich...    75   8e-12
AK147881_1(AK147881|pid:none) Mus musculus melanocyte cDNA, RIKE...    70   1e-10
(Q91YD9) RecName: Full=Neural Wiskott-Aldrich syndrome protein; ...    70   1e-10
(O08816) RecName: Full=Neural Wiskott-Aldrich syndrome protein; ...    70   1e-10
AK142642_1(AK142642|pid:none) Mus musculus 10 days lactation, ad...    70   1e-10
BX248384_2(BX248384|pid:none) Zebrafish DNA sequence from clone ...    69   3e-10
BC053291_1(BC053291|pid:none) Danio rerio Wiskott-Aldrich syndro...    69   3e-10
AK289795_1(AK289795|pid:none) Homo sapiens cDNA FLJ76749 complet...    68   9e-10
AM295156_1(AM295156|pid:none) Homo sapiens mRNA for WASL protein.      68   9e-10
(Q95107) RecName: Full=Neural Wiskott-Aldrich syndrome protein; ...    68   9e-10
(O00401) RecName: Full=Neural Wiskott-Aldrich syndrome protein; ...    68   9e-10
BC151607_1(BC151607|pid:none) Bos taurus Wiskott-Aldrich syndrom...    68   9e-10
BT019541_1(BT019541|pid:none) Synthetic construct Homo sapiens W...    68   9e-10
AX888223_1(AX888223|pid:none) Sequence 4086 from Patent EP1033401.     66   3e-09
AE017345_510(AE017345|pid:none) Cryptococcus neoformans var. neo...    44   1e-06
CR380953_413(CR380953|pid:none) Candida glabrata strain CBS138 c...    44   2e-06
AE014297_4441(AE014297|pid:none) Drosophila melanogaster chromos...    54   1e-05
BX248384_3(BX248384|pid:none) Zebrafish DNA sequence from clone ...    54   1e-05
AE014297_4439(AE014297|pid:none) Drosophila melanogaster chromos...    54   1e-05
AE016820_654(AE016820|pid:none) Ashbya gossypii (= Eremothecium ...    44   4e-05
AE017344_570(AE017344|pid:none) Cryptococcus neoformans var. neo...    52   5e-05
FN392319_1421(FN392319|pid:none) Pichia pastoris GS115 chromosom...    50   3e-04
AF542530_25(AF542530|pid:none) Cryptococcus neoformans var. neof...    49   6e-04
AP007150_565(AP007150|pid:none) Aspergillus oryzae RIB40 genomic...    48   0.001
AY035877_1(AY035877|pid:none) Filobasidiella neoformans var. neo...    48   0.001
AM774591_1(AM774591|pid:none) Claviceps purpurea cla4 gene for P...    47   0.002
AY710430_19(AY710430|pid:none) Cryptococcus gattii strain WM276 ...    47   0.002
CU928171_633(CU928171|pid:none) Kluyveromyces thermotolerans str...    45   0.006
AF104910_1(AF104910|pid:none) Acanthamoeba castellanii myosin I ...    45   0.006
AM920437_2392(AM920437|pid:none) Penicillium chrysogenum Wiscons...    37   0.008
DQ863327_1(DQ863327|pid:none) Penicillium marneffei STE20-like p...    45   0.008
AY710429_19(AY710429|pid:none) Cryptococcus gattii strain E566 M...    45   0.008
CP000497_454(CP000497|pid:none) Pichia stipitis CBS 6054 chromos...    44   0.011
(Q12446) RecName: Full=Proline-rich protein LAS17;  &AX167565_1(...    44   0.014
(Q2ULU3) RecName: Full=Serine/threonine-protein kinase ste20;   ...    44   0.014
CU928175_86(CU928175|pid:none) Zygosaccharomyces rouxii strain C...    44   0.014
(P48562) RecName: Full=Serine/threonine-protein kinase CLA4;    ...    44   0.014
CR380959_160(CR380959|pid:none) Candida glabrata strain CBS138 c...    44   0.014
EU386160_1(EU386160|pid:none) Rhodosporidium toruloides p21-acti...    43   0.024
EU386161_1(EU386161|pid:none) Rhodosporidium toruloides p21-acti...    43   0.024
EU401862_1(EU401862|pid:none) Rhodosporidium toruloides p21-acti...    43   0.024
AF309805_7(AF309805|pid:none) Pneumocystis carinii f. sp. carini...    43   0.032
AB074145_1(AB074145|pid:none) Synthetic construct gene for Raich...    43   0.032
(P35465) RecName: Full=Serine/threonine-protein kinase PAK 1;   ...    43   0.032
AM270233_19(AM270233|pid:none) Aspergillus niger contig An11c016...    43   0.032
(Q08E52) RecName: Full=Serine/threonine-protein kinase PAK 1;   ...    43   0.032
EU541371_1(EU541371|pid:none) Synthetic construct EGFP-Pak1-Rac1...    43   0.032
EU541372_1(EU541372|pid:none) Synthetic construct EGFP-Pak1-Cdc4...    43   0.032
EU438751_1(EU438751|pid:none) Synthetic construct dsRed1/Pak1/Cd...    43   0.032
EU832767_1(EU832767|pid:none) Synthetic construct Homo sapiens c...    43   0.032
EU438750_1(EU438750|pid:none) Synthetic construct dsRed1/Pak1/Ra...    43   0.032
BC095627_1(BC095627|pid:none) Danio rerio p21 (CDKN1A)-activated...    43   0.032
BC145698_1(BC145698|pid:none) Mus musculus cDNA clone MGC:175585...    43   0.032
(Q13153) RecName: Full=Serine/threonine-protein kinase PAK 1;   ...    43   0.032
(Q4WHP3) RecName: Full=Serine/threonine-protein kinase ste20;   ...    43   0.032
AX885111_1(AX885111|pid:none) Sequence 974 from Patent EP1033401.      43   0.032
CT027565_2(CT027565|pid:none) Zebrafish DNA sequence from clone ...    43   0.032
AK055228_1(AK055228|pid:none) Homo sapiens cDNA FLJ30666 fis, cl...    43   0.032
EF191887_1(EF191887|pid:none) Taeniopygia guttata clone 0063P001...    43   0.032
U51120_1(U51120|pid:none) Human protein kinase PAK1 mRNA, comple...    43   0.032
AY144920_1(AY144920|pid:none) Saccharomyces castellii clone Cont...    42   0.054
X69322_1(X69322|pid:none) S.cerevisiae gene for protein-kinase.        42   0.054
AF233061_1(AF233061|pid:none) Yarrowia lipolytica protein kinase...    42   0.054
FM992688_943(FM992688|pid:none) Candida dubliniensis CD36 chromo...    42   0.054
CR857841_1(CR857841|pid:none) Pongo abelii mRNA; cDNA DKFZp459P0...    42   0.071
AF082297_1(AF082297|pid:none) Mus musculus Cdc42/Rac effector ki...    42   0.071
AK315284_1(AK315284|pid:none) Homo sapiens cDNA, FLJ96299, highl...    42   0.071
AF092132_1(AF092132|pid:none) Homo sapiens PAK2 mRNA, complete c...    42   0.071
U58751_5(U58751|pid:none) Caenorhabditis elegans cosmid C07G1, c...    42   0.071
AB171759_1(AB171759|pid:none) Macaca fascicularis brain cDNA clo...    42   0.071
AM943855_1(AM943855|pid:none) Xenopus laevis mRNA for PAK3a prot...    42   0.071
AJ496262_1(AJ496262|pid:none) Mus musculus mRNA for p21-activate...    42   0.071
CR382137_196(CR382137|pid:none) Debaryomyces hansenii strain CBS...    41   0.092
AY332225_1(AY332225|pid:none) Magnaporthe grisea PAK kinase (MST...    41   0.093
(Q7Z8E9) RecName: Full=Serine/threonine-protein kinase MST20;   ...    41   0.093
BC097887_1(BC097887|pid:none) Xenopus laevis hypothetical protei...    41   0.12
CR380959_443(CR380959|pid:none) Candida glabrata strain CBS138 c...    41   0.12
CR382134_535(CR382134|pid:none) Debaryomyces hansenii strain CBS...    41   0.12
U63744_1(U63744|pid:none) Caenorhabditis elegans p21-activated k...    41   0.12
T15467(T15467)hypothetical protein C09B8.7 - Caenorhabditis eleg...    41   0.12
(Q17850) RecName: Full=Serine/threonine-protein kinase pak-1;   ...    41   0.12
BC123290_1(BC123290|pid:none) Xenopus laevis cDNA clone IMAGE:83...    41   0.12
AY616187_1(AY616187|pid:none) Ustilago maydis p21-activated kina...    40   0.16
(Q13177) RecName: Full=Serine/threonine-protein kinase PAK 2;   ...    40   0.16
BC081113_1(BC081113|pid:none) Xenopus laevis p21 GTPase-associat...    40   0.16
AF169794_1(AF169794|pid:none) Xenopus laevis p21 GTPase-associat...    40   0.16
CR760405_1(CR760405|pid:none) Xenopus tropicalis finished cDNA, ...    40   0.16
BT059115_1(BT059115|pid:none) Salmo salar clone ssal-rgf-526-128...    40   0.16
U25975_1(U25975|pid:none) Human serine kinase (hPAK65) mRNA, par...    40   0.16
(Q29502) RecName: Full=Serine/threonine-protein kinase PAK 2;   ...    40   0.16
BC065603_1(BC065603|pid:none) Danio rerio p21/Cdc42/Rac1-activat...    40   0.16
BC044138_1(BC044138|pid:none) Danio rerio p21/Cdc42/Rac1-activat...    40   0.16
EF450108_1(EF450108|pid:none) Fusarium oxysporum f. sp. phaseoli...    40   0.21
U56080_1(U56080|pid:none) Drosophila melanogaster p21-activated ...    40   0.21
AE014297_446(AE014297|pid:none) Drosophila melanogaster chromoso...    40   0.21
AK291339_1(AK291339|pid:none) Homo sapiens cDNA FLJ75088 complet...    40   0.21
(Q7RZD3) RecName: Full=Serine/threonine-protein kinase ste-20;  ...    39   0.46
AL772143_1(AL772143|pid:none) Zebrafish DNA sequence from clone ...    39   0.46
BT001523_1(BT001523|pid:none) Drosophila melanogaster RE01659 fu...    39   0.60
Y10158_1(Y10158|pid:none) D.discoideum mRNA for STE20/pak kinase...    39   0.60
(Q869N2) RecName: Full=Serine/threonine-protein kinase pakB;    ...    38   0.78
U67716_1(U67716|pid:none) Dictyostelium discoideum myosin I heav...    38   0.78
U19967_1(U19967|pid:none) Rattus norvegicus serine/threonine pro...    38   0.78
AF000239_1(AF000239|pid:none) Xenopus laevis p21-activated kinas...    38   1.0
(Q9NQU5) RecName: Full=Serine/threonine-protein kinase PAK 6;   ...    38   1.0
AY891344_1(AY891344|pid:none) Synthetic construct Homo sapiens c...    38   1.0
(Q3ULB5) RecName: Full=Serine/threonine-protein kinase PAK 6;   ...    38   1.0
AK131522_1(AK131522|pid:none) Homo sapiens cDNA FLJ42691 fis, cl...    38   1.0
EF043734_1(EF043734|pid:none) Synthetic construct clone ATCC 106...    38   1.0
(Q5R8Z4) RecName: Full=Serine/threonine-protein kinase PAK 6;   ...    38   1.0
DQ895303_1(DQ895303|pid:none) Synthetic construct Homo sapiens c...    38   1.0
(Q4P5N0) RecName: Full=Serine/threonine-protein kinase SMU1;    ...    37   1.3
AK099317_1(AK099317|pid:none) Oryza sativa Japonica Group cDNA c...    37   1.3
AF155651_1(AF155651|pid:none) Human P21 activated kinase-3 mRNA.       37   2.3
(P50527) RecName: Full=Serine/threonine-protein kinase shk1/pak1...    37   2.3
AF277804_1(AF277804|pid:none) Dictyostelium discoideum PakC mRNA...    37   2.3
BC059992_1(BC059992|pid:none) Xenopus laevis hypothetical protei...    37   2.3
(Q55GV3) RecName: Full=Serine/threonine-protein kinase pakC;    ...    37   2.3
EF144425_1(EF144425|pid:none) Populus trichocarpa clone PX0019_G...    36   3.0
AC117076_46(AC117076|pid:none) Dictyostelium discoideum chromoso...    36   3.9
BC127316_1(BC127316|pid:none) Xenopus tropicalis hypothetical pr...    36   3.9
AJ277826_1(AJ277826|pid:none) Xenopus laevis mRNA for p21 activa...    35   5.1
BC087332_1(BC087332|pid:none) Xenopus laevis PAK5 protein, mRNA ...    35   5.1
AP008210_1967(AP008210|pid:none) Oryza sativa (japonica cultivar...    35   6.6
(O36027) RecName: Full=Wiskott-Aldrich syndrome protein homolog ...    35   6.6
DQ653006_1(DQ653006|pid:none) Arabidopsis thaliana clone 0000009...    35   6.6
AC006569_1(AC006569|pid:none) Arabidopsis thaliana chromosome 2 ...    35   6.6
BC068016_1(BC068016|pid:none) Danio rerio p21(CDKN1A)-activated ...    35   8.7
AK079080_1(AK079080|pid:none) Mus musculus adult male diencephal...    35   8.7
AB033090_1(AB033090|pid:none) Homo sapiens mRNA for KIAA1264 pro...    35   8.7
(Q8C015) RecName: Full=Serine/threonine-protein kinase PAK 7;   ...    35   8.7
AK315820_1(AK315820|pid:none) Homo sapiens cDNA, FLJ79469 comple...    35   8.7
(Q9P286) RecName: Full=Serine/threonine-protein kinase PAK 7;   ...    35   8.7
AY487425_1(AY487425|pid:none) Mus musculus p21-activated kinase ...    35   8.7

>AF305060_1(AF305060|pid:none) Dictyostelium discoideum
           Wiscott-Aldrich syndrome protein (wasA) gene, complete
           cds.
          Length = 399

 Score =  254 bits (648), Expect(2) = e-113
 Identities = 127/154 (82%), Positives = 129/154 (83%)
 Frame = +1

Query: 388 FKNKEISFFAFEGDSCVYGLSFADVTEAAEFYGQLLNCKQGNIGKTAAINPNTSSTKITA 567
           F+ +   FFAFEGDSCVYGLSFADVTEAAEFYGQLLNCKQGNIGKTAAINPNTSSTKITA
Sbjct: 84  FQKQRDFFFAFEGDSCVYGLSFADVTEAAEFYGQLLNCKQGNIGKTAAINPNTSSTKITA 143

Query: 568 STPAPXXXXXXXXXXXXXXXXXXXXXDLEISAPTNFKHESHIGWDPENGFDIKNIPPDWR 747
           STPAP                     DLEISAPTNFKHESHIGWDPENGFDIKNIPPDWR
Sbjct: 144 STPAPKVEKKKEKKGFMSKFFSSEEKDLEISAPTNFKHESHIGWDPENGFDIKNIPPDWR 203

Query: 748 KLFQSAGIKKSELKNAETAQFIVNIIGEQMVGGS 849
           KLFQSAGIKKSELKNAETAQFIVNIIGEQMVGGS
Sbjct: 204 KLFQSAGIKKSELKNAETAQFIVNIIGEQMVGGS 237

 Score =  178 bits (452), Expect(2) = e-113
 Identities = 89/89 (100%), Positives = 89/89 (100%)
 Frame = +3

Query: 138 MGSPTISDQEKSQVAFIAGSSSDIHSTTVARLYEGRQGRWEFMAVGIVSVVSNRVDKTNY 317
           MGSPTISDQEKSQVAFIAGSSSDIHSTTVARLYEGRQGRWEFMAVGIVSVVSNRVDKTNY
Sbjct: 1   MGSPTISDQEKSQVAFIAGSSSDIHSTTVARLYEGRQGRWEFMAVGIVSVVSNRVDKTNY 60

Query: 318 IKVFDLKANYRIIFEQEIYDTFEFQKQRD 404
           IKVFDLKANYRIIFEQEIYDTFEFQKQRD
Sbjct: 61  IKVFDLKANYRIIFEQEIYDTFEFQKQRD 89

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/41 (100%), Positives = 41/41 (100%)
 Frame = +2

Query: 1130 RNDLLASIRSGASLKAVDKTNPLPDIQSLGNEGSRSLADTL 1252
            RNDLLASIRSGASLKAVDKTNPLPDIQSLGNEGSRSLADTL
Sbjct: 331  RNDLLASIRSGASLKAVDKTNPLPDIQSLGNEGSRSLADTL 371

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,590,056,060
Number of extensions: 25749848
Number of successful extensions: 60743
Number of sequences better than 10.0: 147
Number of HSP's gapped: 60698
Number of HSP's successfully gapped: 171
Length of query: 470
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 338
Effective length of database: 623,955,076
Effective search space: 210896815688
Effective search space used: 210896815688
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

 psg: 0.80  gvh: 0.61  alm: 0.45  top: 0.53  tms: 0.00  mit: 0.35  mip: 0.00
 nuc: 0.03  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: nuclear
	 36.0 %: cytoplasmic
	 16.0 %: mitochondrial
	  8.0 %: cytoskeletal

>> prediction for Contig-U13443-1 is nuc