Contig-U13433-1
Contig ID Contig-U13433-1
Contig update 2002.12.18
Contig sequence
>Contig-U13433-1 (Contig-U13433-1Q) /CSM_Contig/Contig-U13433-1Q.Seq.d
AACAATAATAATAATAATAATAATAACAATAGTTTAAATGCAAGTTCAAG
TGCAAGTGGTAGTAGTAATGGTAGTAGTCCTGGTCATAGTATGAATAGTA
GTTGTAATGGTTTAAGTTTTAGTGGTTTCGCTAGTAGTTTTGGTTTCATT
AGTGGTGGTGGTAATGGTGGTAATAATAGAAAAGATAAAGTAATTTCAAT
GATAAATGAAACCGTTGCAAGAATTAATGGTGAATATGGTAAAGTTGGTA
CAATACCAATTCAATATATCAATCGTTTTGTAGATTATGAAGAGATTTGT
TCATTCTTTCAGGTTGCCGATATTTTATTATCTGCACCATTAAGAGAGGG
TATGAATTTAGATACTCATGATTTTGTTGCTTCACATAGAATTAAGAATT
CCAATGGTTATGATAACAATGATAAACCTGGAATTTTAATATTAAGTGAA
TTTGATGGAGCTTCAAGATGCTTTAGTGGTGCAATTTTAGTTAATCCTTA
TAGCGTCAACCAAATTAGTCAAGGTATTGAAACTGCATTTCATTTAAAGA
ATGAAGAAGCAGTCATTAAACATAATCAAAATTTAGAATATGTAATGACC
AATACAAGTTATCTATGGGGTGAAGCATTCCTTTATGATATCCTATCACT
TCAAGATCAATTGC

Gap no gap
Contig length 664
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 4001303
End point 4001939
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U13433
List of clone(s)

est1=SSJ661F,1,665
Translated Amino Acid sequence
NNNNNNNNNNSLNASSSASGSSNGSSPGHSMNSSCNGLSFSGFASSFGFISGGGNGGNNR
KDKVISMINETVARINGEYGKVGTIPIQYINRFVDYEEICSFFQVADILLSAPLREGMNL
DTHDFVASHRIKNSNGYDNNDKPGILILSEFDGASRCFSGAILVNPYSVNQISQGIETAF
HLKNEEAVIKHNQNLEYVMTNTSYLWGEAFLYDILSLQDQL


Translated Amino Acid sequence (All Frames)
Frame A:
NNNNNNNNNNSLNASSSASGSSNGSSPGHSMNSSCNGLSFSGFASSFGFISGGGNGGNNR
KDKVISMINETVARINGEYGKVGTIPIQYINRFVDYEEICSFFQVADILLSAPLREGMNL
DTHDFVASHRIKNSNGYDNNDKPGILILSEFDGASRCFSGAILVNPYSVNQISQGIETAF
HLKNEEAVIKHNQNLEYVMTNTSYLWGEAFLYDILSLQDQL


Frame B:
tiiiiiiitiv*mqvqvqvvvvmvvvlviv*ivvvmv*vlvvslvvlvslvvvvmvviie
kik*fq**mkplqelmvnmvklvqyqfnisivl*imkrfvhsfrlpifyylhh*erv*i*
ilmilllhielripmvmitminlef*y*vnlmelqdalvvqf*liliastklvkvlklhf
i*rmkkqslniiki*nm**piqviygvkhsfmisyhfkinc


Frame C:
q*******q*fkckfkckw***w**sws*ye**l*wfkf*wfr**fwfh*www*ww***k
r*snfndk*nrckn*w*iw*swyntnsiyqsfcrl*rdlfilsgcryfiictikrgyefr
ys*fccft*n*efqwl**q**twnfnik*i*wsfkml*wcnfs*sl*rqpn*sry*ncis
fke*rssh*t*skfricndqyklsmg*sipl*ypitsrsi


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U13433-1 (Contig-U13433-1Q)
/CSM_Contig/Contig-U13433-1Q.Seq.d
(664 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U13433-1 (Contig-U13433-1Q) /CSM_Contig/Conti... 1265 0.0
Contig-U04975-1 (Contig-U04975-1Q) /CSM_Contig/Conti... 50 3e-06
Contig-U10875-1 (Contig-U10875-1Q) /CSM_Contig/Conti... 44 2e-04
Contig-U11862-1 (Contig-U11862-1Q) /CSM_Contig/Conti... 42 8e-04
Contig-U08910-1 (Contig-U08910-1Q) /CSM_Contig/Conti... 42 8e-04
Contig-U14519-1 (Contig-U14519-1Q) /CSM_Contig/Conti... 40 0.003
Contig-U12838-1 (Contig-U12838-1Q) /CSM_Contig/Conti... 40 0.003
Contig-U11866-1 (Contig-U11866-1Q) /CSM_Contig/Conti... 40 0.003
Contig-U11253-1 (Contig-U11253-1Q) /CSM_Contig/Conti... 40 0.003
Contig-U03259-1 (Contig-U03259-1Q) /CSM_Contig/Conti... 38 0.012

>Contig-U13433-1 (Contig-U13433-1Q) /CSM_Contig/Contig-U13433-1Q.Seq.d
Length = 664

Score = 1265 bits (638), Expect = 0.0
Identities = 638/638 (100%)
Strand = Plus / Plus


Query: 27 caatagtttaaatgcaagttcaagtgcaagtggtagtagtaatggtagtagtcctggtca 86
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27 caatagtttaaatgcaagttcaagtgcaagtggtagtagtaatggtagtagtcctggtca 86


Query: 87 tagtatgaatagtagttgtaatggtttaagttttagtggtttcgctagtagttttggttt 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 tagtatgaatagtagttgtaatggtttaagttttagtggtttcgctagtagttttggttt 146


Query: 147 cattagtggtggtggtaatggtggtaataatagaaaagataaagtaatttcaatgataaa 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 cattagtggtggtggtaatggtggtaataatagaaaagataaagtaatttcaatgataaa 206


Query: 207 tgaaaccgttgcaagaattaatggtgaatatggtaaagttggtacaataccaattcaata 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tgaaaccgttgcaagaattaatggtgaatatggtaaagttggtacaataccaattcaata 266


Query: 267 tatcaatcgttttgtagattatgaagagatttgttcattctttcaggttgccgatatttt 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tatcaatcgttttgtagattatgaagagatttgttcattctttcaggttgccgatatttt 326


Query: 327 attatctgcaccattaagagagggtatgaatttagatactcatgattttgttgcttcaca 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 attatctgcaccattaagagagggtatgaatttagatactcatgattttgttgcttcaca 386


Query: 387 tagaattaagaattccaatggttatgataacaatgataaacctggaattttaatattaag 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tagaattaagaattccaatggttatgataacaatgataaacctggaattttaatattaag 446


Query: 447 tgaatttgatggagcttcaagatgctttagtggtgcaattttagttaatccttatagcgt 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tgaatttgatggagcttcaagatgctttagtggtgcaattttagttaatccttatagcgt 506


Query: 507 caaccaaattagtcaaggtattgaaactgcatttcatttaaagaatgaagaagcagtcat 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 caaccaaattagtcaaggtattgaaactgcatttcatttaaagaatgaagaagcagtcat 566


Query: 567 taaacataatcaaaatttagaatatgtaatgaccaatacaagttatctatggggtgaagc 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 taaacataatcaaaatttagaatatgtaatgaccaatacaagttatctatggggtgaagc 626


Query: 627 attcctttatgatatcctatcacttcaagatcaattgc 664
||||||||||||||||||||||||||||||||||||||
Sbjct: 627 attcctttatgatatcctatcacttcaagatcaattgc 664


>Contig-U04975-1 (Contig-U04975-1Q) /CSM_Contig/Contig-U04975-1Q.Seq.d
Length = 531

Score = 50.1 bits (25), Expect = 3e-06
Identities = 25/25 (100%)
Strand = Plus / Plus


Query: 152 gtggtggtggtaatggtggtaataa 176
|||||||||||||||||||||||||
Sbjct: 310 gtggtggtggtaatggtggtaataa 334


>Contig-U10875-1 (Contig-U10875-1Q) /CSM_Contig/Contig-U10875-1Q.Seq.d
Length = 2671

Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 153 tggtggtggtaatggtggtaat 174
||||||||||||||||||||||
Sbjct: 2475 tggtggtggtaatggtggtaat 2496


Score = 36.2 bits (18), Expect = 0.046
Identities = 24/26 (92%)
Strand = Plus / Plus


Query: 153 tggtggtggtaatggtggtaataata 178
|||||||||| ||||||||||||||
Sbjct: 2580 tggtggtggtggtggtggtaataata 2605


Score = 36.2 bits (18), Expect = 0.046
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 151 agtggtggtggtaatggtggta 172
||||||||||||||||| ||||
Sbjct: 2521 agtggtggtggtaatggaggta 2542


Score = 34.2 bits (17), Expect = 0.18
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 156 tggtggtaatggtggta 172
|||||||||||||||||
Sbjct: 2487 tggtggtaatggtggta 2503


Score = 30.2 bits (15), Expect = 2.9
Identities = 18/19 (94%)
Strand = Plus / Minus


Query: 290 aagagatttgttcattctt 308
|||||||||||| ||||||
Sbjct: 714 aagagatttgttaattctt 696


Score = 30.2 bits (15), Expect = 2.9
Identities = 18/19 (94%)
Strand = Plus / Minus


Query: 290 aagagatttgttcattctt 308
|||||||||||| ||||||
Sbjct: 1793 aagagatttgttaattctt 1775


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,367
Number of Sequences: 6905
Number of extensions: 10367
Number of successful extensions: 1422
Number of sequences better than 10.0: 209
length of query: 664
length of database: 5,674,871
effective HSP length: 16
effective length of query: 648
effective length of database: 5,564,391
effective search space: 3605725368
effective search space used: 3605725368
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.12. 9
Homology vs DNA
Query= Contig-U13433-1 (Contig-U13433-1Q) /CSM_Contig/Contig-U13433-1Q.Seq.d
(664 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU074158) Dictyostelium discoideum slug cDNA, clone SSJ661. 424 e-114 1
(DH462889) Monosiga ovata DNA, fosmid clone: MOF-002I14, gen... 38 0.009 2
(DH464450) Monosiga ovata DNA, fosmid clone: MOF-005B22, gen... 38 0.010 2
(DH477507) Monosiga ovata DNA, fosmid clone: MOF-028B05, gen... 38 0.011 2
(DH480527) Monosiga ovata DNA, fosmid clone: MOF-033G07, gen... 38 0.016 2
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 48 0.073 9
(AU037761) Dictyostelium discoideum slug cDNA, clone SSE261. 50 0.11 1
(BJ395641) Dictyostelium discoideum cDNA clone:dds39j16, 5' ... 36 0.17 3
(BJ419865) Dictyostelium discoideum cDNA clone:ddv37p10, 5' ... 36 0.19 3
(BJ330193) Dictyostelium discoideum cDNA clone:dda27n14, 5' ... 36 0.21 3
(AC179087) Strongylocentrotus purpuratus clone R3-4009K06, W... 36 0.26 5
(BJ341308) Dictyostelium discoideum cDNA clone:dda6i01, 3' e... 38 0.31 2
(BJ341912) Dictyostelium discoideum cDNA clone:dda8o15, 3' e... 38 0.31 2
(AC179120) Strongylocentrotus purpuratus clone R3-4011I7, WO... 40 0.32 4
(AY302998) HIV-1 isolate 1997USMM97109Fsaps from USA envelop... 48 0.42 1
(AY302997) HIV-1 isolate 1997USMM97109Fszps from USA envelop... 48 0.42 1
(AY302994) HIV-1 isolate 1997USMM97109px from USA envelope g... 48 0.42 1
(AY302990) HIV-1 isolate 1997USMM97109ps from USA envelope g... 48 0.42 1
(AY302978) HIV-1 isolate 1997USMM970109p1 from USA envelope ... 48 0.42 1
(AY302967) HIV-1 isolate 1997USMM97109Fsy from USA envelope ... 48 0.42 1
(AY302966) HIV-1 isolate 1997USMM97109Fsx from USA envelope ... 48 0.42 1
(AY302965) HIV-1 isolate 1997USMM97109Fsw from USA envelope ... 48 0.42 1
(AY302964) HIV-1 isolate 1997USMM97109Fsv from USA envelope ... 48 0.42 1
(AY302963) HIV-1 isolate 1997USMM97109Fsu from USA envelope ... 48 0.42 1
(AY302962) HIV-1 isolate 1997USMM97109Fst from USA envelope ... 48 0.42 1
(AY302956) HIV-1 isolate 1997USMM97109Fs8 from USA envelope ... 48 0.42 1
(AY302955) HIV-1 isolate 1997USMM97109Fs7 from USA envelope ... 48 0.42 1
(AY302954) HIV-1 isolate 1997USMM97109Fs6 from USA envelope ... 48 0.42 1
(AY302953) HIV-1 isolate 1997USMM97109Fs5 from USA envelope ... 48 0.42 1
(AY302951) HIV-1 isolate 1997USMM97109Fs3 from USA envelope ... 48 0.42 1
(AY302949) HIV-1 isolate 1997USMM97109Fs1 from USA envelope ... 48 0.42 1
(AY302945) HIV-1 isolate 97USMM97109Fc9 from USA envelope gl... 48 0.42 1
(AY302942) HIV-1 isolate 97USMM97109Fc5 from USA envelope gl... 48 0.42 1
(AY302941) HIV-1 isolate 97USMM97109Fc4 from USA envelope gl... 48 0.42 1
(AY302938) HIV-1 isolate 97USMM97109Fc1 from USA envelope gl... 48 0.42 1
(AC201176) Strongylocentrotus purpuratus clone R3-14M22, WOR... 48 0.42 1
(AC193047) Macaca mulatta clone CH250-181G4, WORKING DRAFT S... 48 0.42 1
(AC179741) Strongylocentrotus purpuratus clone R3-1018H01, W... 48 0.42 1
(AC175904) Strongylocentrotus purpuratus clone R3-3043G20, W... 48 0.42 1
(AC175899) Strongylocentrotus purpuratus clone R3-14L21, WOR... 48 0.42 1
(EY332774) CAWY5146.fwd CAWY Helobdella robusta Subtracted E... 48 0.42 1
(AC025977) Homo sapiens chromosome 4 clone RP11-565I1 map 4,... 44 0.56 3
(AC102974) Rattus norvegicus clone CH230-75I13, WORKING DRAF... 46 0.67 4
(EG601606) BRAINF100763F11 POSSUM_01-POSSUM-C-BRAIN-2KB Tric... 36 0.72 2
(EU094835) Humulus lupulus clone ACC2-E14-4 microsatellite s... 40 0.75 2
(AY736811) HIV-1 isolate 99KE_KNH1088 from Kenya envelope gl... 42 0.75 2
(AC115246) Rattus norvegicus clone CH230-257M15, WORKING DRA... 46 0.77 2
(EU577974) HIV-1 isolate 5734.14 from USA vpu protein (vpu) ... 44 0.85 2
(AC178909) Strongylocentrotus purpuratus clone R3-3114P4, WO... 40 0.89 5
(AC174095) Strongylocentrotus purpuratus clone R3-43G5, WORK... 32 0.90 2
(CZ975508) 177179 Tomato MboI BAC Library Solanum lycopersic... 32 1.2 2
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 38 1.3 8
(CU210928) Mouse DNA sequence from clone CH29-567F20 on chro... 46 1.7 1
(CT573084) Mouse DNA sequence from clone RP23-226G14 on chro... 46 1.7 1
(AL714006) Mouse DNA sequence from clone RP23-173E15 on chro... 46 1.7 1
(AC154800) Mus musculus BAC clone RP24-496O9 from 14, comple... 46 1.7 1
(AC154235) Mus musculus BAC clone RP24-347C11 from 17, compl... 46 1.7 1
(AC127322) Mus musculus BAC clone RP23-238A8 from chromosome... 46 1.7 1
(AC116892) Mus musculus chromosome 8, clone RP24-529J16, com... 46 1.7 1
(BD460615) Diagnosis of Diseases Associated with Cell Cycle. 46 1.7 1
(BD452537) Diagnosis of Diseases Associated with Cell Cycle. 46 1.7 1
(AX348922) Sequence 380 from Patent WO0202807. 46 1.7 1
(AX344519) Sequence 366 from Patent WO0200926. 46 1.7 1
(AX252151) Sequence 412 from Patent WO0168911. 46 1.7 1
(AC157239) Bos taurus clone CH240-56L12, WORKING DRAFT SEQUE... 46 1.7 1
(AC094737) Rattus norvegicus clone CH230-5F11, WORKING DRAFT... 46 1.7 1
(AC220659) Bos taurus clone CH240-351C22, WORKING DRAFT SEQU... 46 1.7 1
(AC200960) Strongylocentrotus purpuratus clone R3-1111M12, W... 46 1.7 1
(AC199997) Atelerix albiventris clone LB4-291F16, WORKING DR... 46 1.7 1
(AC198663) Pan troglodytes chromosome 10 clone CH251-693M2, ... 46 1.7 1
(AC191201) Atelerix albiventris clone LB4-376L11, WORKING DR... 46 1.7 1
(AC180241) Strongylocentrotus purpuratus clone R3-3008G11, W... 46 1.7 1
(AC176606) Strongylocentrotus purpuratus clone R3-3079F5, WO... 46 1.7 1
(AC175935) Strongylocentrotus purpuratus clone R3-17A14, WOR... 46 1.7 1
(AC165818) Bos taurus clone CH240-158M13, WORKING DRAFT SEQU... 46 1.7 1
(ER328849) 1092344239198 Global-Ocean-Sampling_GS-34-01-01-1... 46 1.7 1
(AM765048) Sycon raphanus EST, 5' end sequence, clone IL0ADA... 46 1.7 1
(CV586025) zcn10e04.y2 F_HC7CDNA Ajellomyces capsulatus cDNA... 46 1.7 1
(CK136815) MM2_2_4_C09 Sugar beet 10-week GH root cDNA Beta ... 46 1.7 1
(CF886656) tric084xc11.b1 T.reesei mycelial culture, Version... 46 1.7 1
(CB907997) tric084xc11 T.reesei mycelial culture, Version 3 ... 46 1.7 1
(CA525353) KS12053G05 KS12 Capsicum annuum cDNA, mRNA sequence. 46 1.7 1
(CA516474) KS09058H12 KS09 Capsicum annuum cDNA, mRNA sequence. 46 1.7 1
(CA516340) KS09056F06 KS09 Capsicum annuum cDNA, mRNA sequence. 46 1.7 1
(CA514740) KS09030E01 KS09 Capsicum annuum cDNA, mRNA sequence. 46 1.7 1
(CA514681) KS09029D03 KS09 Capsicum annuum cDNA, mRNA sequence. 46 1.7 1
(EU094832) Humulus lupulus clone ACC4-C22-9 microsatellite s... 40 1.7 2
(AC112874) Rattus norvegicus clone CH230-228J8, *** SEQUENCI... 42 1.8 4
(AC178115) Strongylocentrotus purpuratus clone R3-3073N20, W... 36 1.8 3
(AC011670) Homo sapiens chromosome 5 clone RP11-138H1 map 5,... 40 1.8 3
(DH473627) Monosiga ovata DNA, fosmid clone: MOF-021F05, gen... 38 1.9 2
(AC130154) Rattus norvegicus clone CH230-30P20, *** SEQUENCI... 44 2.0 4
(EB828083) 1152900 KZ03 Plodia interpunctella cDNA clone 584... 36 2.2 2
(AC120107) Rattus norvegicus chromosome 1 clone RP32-274G9 m... 38 2.2 2
(AP005527) Oryza sativa Japonica Group genomic DNA, chromoso... 42 2.3 3
(AY588382) Humulus lupulus clone HlCAG8 microsatellite seque... 40 2.3 2
(AC011371) Homo sapiens chromosome 5 clone CTB-107C20, WORKI... 38 2.5 2
(FK076129) XABT133566.g1 Gateway compatible cien cDNA librar... 36 2.5 2
(DH464233) Monosiga ovata DNA, fosmid clone: MOF-004L21, gen... 36 2.5 2
(CR854987) Zebrafish DNA sequence from clone CH211-185J22 in... 38 2.5 4

>(AU074158) Dictyostelium discoideum slug cDNA, clone SSJ661.
Length = 240

Score = 424 bits (214), Expect = e-114
Identities = 214/214 (100%)
Strand = Plus / Plus


Query: 27 caatagtttaaatgcaagttcaagtgcaagtggtagtagtaatggtagtagtcctggtca 86
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27 caatagtttaaatgcaagttcaagtgcaagtggtagtagtaatggtagtagtcctggtca 86


Query: 87 tagtatgaatagtagttgtaatggtttaagttttagtggtttcgctagtagttttggttt 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 tagtatgaatagtagttgtaatggtttaagttttagtggtttcgctagtagttttggttt 146


Query: 147 cattagtggtggtggtaatggtggtaataatagaaaagataaagtaatttcaatgataaa 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 cattagtggtggtggtaatggtggtaataatagaaaagataaagtaatttcaatgataaa 206


Query: 207 tgaaaccgttgcaagaattaatggtgaatatggt 240
||||||||||||||||||||||||||||||||||
Sbjct: 207 tgaaaccgttgcaagaattaatggtgaatatggt 240

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 730,134,558
Number of extensions: 43695697
Number of successful extensions: 3533257
Number of sequences better than 10.0: 245
Length of query: 664
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 640
Effective length of database: 97,308,875,965
Effective search space: 62277680617600
Effective search space used: 62277680617600
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7. 7
Homology vs Protein
Query= Contig-U13433-1 (Contig-U13433-1Q) /CSM_Contig/Contig-U13433-1Q.Seq.d
(664 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54NU9) RecName: Full=Alpha,alpha-trehalose-phosphate synthase ... 134 2e-30
EF151131_1(EF151131|pid:none) Solanum lycopersicum trehalose-pho... 112 7e-24
(Q9SYM4) RecName: Full=Alpha,alpha-trehalose-phosphate synthase ... 112 1e-23
AF370287_1(AF370287|pid:none) Arabidopsis thaliana putative treh... 112 1e-23
A93399_1(A93399|pid:none) Sequence 3 from Patent WO9742327. 112 1e-23
(Q9FZ57) RecName: Full=Probable alpha,alpha-trehalose-phosphate ... 112 1e-23
AC007651_30(AC007651|pid:none) Arabidopsis thaliana chromosome I... 111 2e-23
(Q9SHG0) RecName: Full=Probable alpha,alpha-trehalose-phosphate ... 111 2e-23
FJ167677_1(FJ167677|pid:none) Triticum aestivum trehalose-6-P sy... 110 3e-23
AP008211_1686(AP008211|pid:none) Oryza sativa (japonica cultivar... 110 4e-23
CP000496_558(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 110 5e-23
FM992695_507(FM992695|pid:none) Candida dubliniensis CD36 chromo... 109 8e-23
(Q92410) RecName: Full=Alpha,alpha-trehalose-phosphate synthase ... 108 1e-22
CP000581_241(CP000581|pid:none) Ostreococcus lucimarinus CCE9901... 108 1e-22
X68214_1(X68214|pid:none) S.cerevisiae TPS1 mRNA for alpha,alpha... 108 1e-22
X61275_1(X61275|pid:none) S.cerevisiae cif1 gene, a mutation whi... 108 1e-22
CP001574_202(CP001574|pid:none) Micromonas sp. RCC299 chromosome... 105 9e-22
EF110520_1(EF110520|pid:none) Saccharomyces cerevisiae trehalose... 105 9e-22
A67867_1(A67867|pid:none) Sequence 39 from Patent WO9742326. &Y... 105 1e-21
CR380956_419(CR380956|pid:none) Candida glabrata strain CBS138 c... 105 2e-21
AE016817_23(AE016817|pid:none) Ashbya gossypii (= Eremothecium g... 105 2e-21
CU928175_707(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 104 2e-21
(Q96WK6) RecName: Full=Alpha,alpha-trehalose-phosphate synthase ... 103 6e-21
(A7MEE9) RecName: Full=Alpha,alpha-trehalose-phosphate synthase ... 102 1e-20
AY148093_1(AY148093|pid:none) Magnaporthe grisea trehalose-6-pho... 101 2e-20
(O74932) RecName: Full=Alpha,alpha-trehalose-phosphate synthase ... 101 2e-20
(Q54K57) RecName: Full=Alpha,alpha-trehalose-phosphate synthase ... 100 4e-20
EF444931_1(EF444931|pid:none) Rhizobium leguminosarum bv. trifol... 100 4e-20
CP000151_2530(CP000151|pid:none) Burkholderia sp. 383 chromosome... 100 7e-20
(Q00075) RecName: Full=Alpha,alpha-trehalose-phosphate synthase ... 99 9e-20
AM270183_12(AM270183|pid:none) Aspergillus niger contig An08c028... 99 9e-20
BX571965_1057(BX571965|pid:none) Burkholderia pseudomallei strai... 99 9e-20
CP000086_896(CP000086|pid:none) Burkholderia thailandensis E264 ... 99 9e-20
AM747720_2468(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 99 1e-19
AP009385_2308(AP009385|pid:none) Burkholderia multivorans ATCC 1... 99 1e-19
AE017348_50(AE017348|pid:none) Cryptococcus neoformans var. neof... 98 2e-19
CP001025_2278(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 98 2e-19
FP236842_1530(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/9... 97 3e-19
CP001127_1955(CP001127|pid:none) Salmonella enterica subsp. ente... 97 4e-19
(Q9LMI0) RecName: Full=Probable alpha,alpha-trehalose-phosphate ... 97 4e-19
CP001120_2014(CP001120|pid:none) Salmonella enterica subsp. ente... 97 4e-19
(A9MU86) RecName: Full=Alpha,alpha-trehalose-phosphate synthase ... 97 4e-19
(Q57N70) RecName: Full=Alpha,alpha-trehalose-phosphate synthase ... 97 4e-19
AE014075_2245(AE014075|pid:none) Escherichia coli CFT073, comple... 97 6e-19
CP001113_1967(CP001113|pid:none) Salmonella enterica subsp. ente... 97 6e-19
(Q6JTB2) RecName: Full=Alpha,alpha-trehalose-phosphate synthase ... 97 6e-19
(Q0TGU0) RecName: Full=Alpha,alpha-trehalose-phosphate synthase ... 97 6e-19
CU928162_2116(CU928162|pid:none) Escherichia coli ED1a chromosom... 97 6e-19
(A1AC53) RecName: Full=Alpha,alpha-trehalose-phosphate synthase ... 97 6e-19
CP000243_2063(CP000243|pid:none) Escherichia coli UTI89, complet... 97 6e-19
FM180568_2017(FM180568|pid:none) Escherichia coli 0127:H6 E2348/... 97 6e-19
CU928163_2157(CU928163|pid:none) Escherichia coli UMN026 chromos... 97 6e-19
CP000680_3098(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 97 6e-19
CP000880_967(CP000880|pid:none) Salmonella enterica subsp. arizo... 97 6e-19
(A7ZN22) RecName: Full=Alpha,alpha-trehalose-phosphate synthase ... 97 6e-19
(A8A1A0) RecName: Full=Alpha,alpha-trehalose-phosphate synthase ... 97 6e-19
(A9MMQ2) RecName: Full=Alpha,alpha-trehalose-phosphate synthase ... 97 6e-19
(Q8XCE7) RecName: Full=Alpha,alpha-trehalose-phosphate synthase ... 96 7e-19
AM920437_202(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 96 9e-19
(O94213) RecName: Full=Alpha,alpha-trehalose-phosphate synthase ... 96 9e-19
CP000113_1165(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 96 1e-18
CP000964_1846(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 96 1e-18
AM931067_1(AM931067|pid:none) Brevibacterium lactofermentum otsA... 95 2e-18
CP001191_135(CP001191|pid:none) Rhizobium leguminosarum bv. trif... 95 2e-18
AY954915_1(AY954915|pid:none) Metarhizium anisopliae var. acridu... 95 2e-18
T46564(T46564) alpha,alpha-trehalose-phosphate synthase (UDP-for... 95 2e-18
CP000822_1018(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 94 4e-18
(A8AFD4) RecName: Full=Alpha,alpha-trehalose-phosphate synthase ... 94 4e-18
AC135160_19(AC135160|pid:none) Medicago truncatula clone mth2-20... 94 5e-18
(A4WBR1) RecName: Full=Alpha,alpha-trehalose-phosphate synthase ... 93 6e-18
AX353377_1(AX353377|pid:none) Sequence 29 from Patent EP1174508. 93 6e-18
AF483209_1(AF483209|pid:none) Solanum tuberosum putative trehalo... 93 6e-18
CU468135_1457(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 93 8e-18
AJ621287_1(AJ621287|pid:none) Thermoproteus tenax tpsp gene for ... 92 1e-17
AM433362_1(AM433362|pid:none) Vitis vinifera contig VV78X144094.... 91 2e-17
AM746676_489(AM746676|pid:none) Sorangium cellulosum 'So ce 56' ... 91 3e-17
CP000090_416(CP000090|pid:none) Ralstonia eutropha JMP134 chromo... 91 4e-17
CP000383_396(CP000383|pid:none) Cytophaga hutchinsonii ATCC 3340... 90 5e-17
CP000435_1368(CP000435|pid:none) Synechococcus sp. CC9311, compl... 90 5e-17
AM476587_2(AM476587|pid:none) Vitis vinifera contig VV78X118228.... 90 5e-17
AY884150_1(AY884150|pid:none) Ginkgo biloba trehalose-6-phosphat... 90 7e-17
AM411662_1(AM411662|pid:none) Plasmodiophora brassicae OtsA gene... 90 7e-17
AM746676_3271(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 90 7e-17
AY714857_41(AY714857|pid:none) Uncultured archaeon GZfos33E1 clo... 89 9e-17
AE006469_129(AE006469|pid:none) Sinorhizobium meliloti 1021 plas... 89 1e-16
CP000633_283(CP000633|pid:none) Agrobacterium vitis S4 chromosom... 89 2e-16
AP008957_1284(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 89 2e-16
(Q0WUI9) RecName: Full=Probable alpha,alpha-trehalose-phosphate ... 89 2e-16
AY714868_32(AY714868|pid:none) Uncultured archaeon GZfos37D1 clo... 89 2e-16
AC003671_18(AC003671|pid:none) Arabidopsis thaliana chromosome 1... 89 2e-16
AP002899_24(AP002899|pid:none) Oryza sativa Japonica Group genom... 88 2e-16
AP011115_4806(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 88 2e-16
CP000252_2817(CP000252|pid:none) Syntrophus aciditrophicus SB, c... 88 2e-16
CP000562_2204(CP000562|pid:none) Methanoculleus marisnigri JR1, ... 88 2e-16
CP000157_938(CP000157|pid:none) Erythrobacter litoralis HTCC2594... 88 3e-16
AP003017_74(AP003017|pid:none) Mesorhizobium loti MAFF303099 pla... 87 4e-16
CU207366_1024(CU207366|pid:none) Gramella forsetii KT0803 comple... 87 4e-16
CP000359_57(CP000359|pid:none) Deinococcus geothermalis DSM 1130... 87 4e-16
AY714859_12(AY714859|pid:none) Uncultured archaeon GZfos34A6 clo... 87 6e-16
CP000660_573(CP000660|pid:none) Pyrobaculum arsenaticum DSM 1351... 87 6e-16
AY714862_42(AY714862|pid:none) Uncultured archaeon GZfos34H9 clo... 87 6e-16
(Q50167) RecName: Full=Trehalose-phosphate synthase; Sh... 87 6e-16
CP000270_2175(CP000270|pid:none) Burkholderia xenovorans LB400 c... 87 6e-16
CT978603_1373(CT978603|pid:none) Synechococcus sp. RCC307 genomi... 87 6e-16
CP000828_1615(CP000828|pid:none) Acaryochloris marina MBIC11017,... 86 8e-16
CP000270_1073(CP000270|pid:none) Burkholderia xenovorans LB400 c... 86 8e-16
AM889285_916(AM889285|pid:none) Gluconacetobacter diazotrophicus... 86 8e-16
(A1KPH5) RecName: Full=Trehalose-phosphate synthase; Sh... 86 1e-15
AP009384_482(AP009384|pid:none) Azorhizobium caulinodans ORS 571... 86 1e-15
AP011115_214(AP011115|pid:none) Rhodococcus opacus B4 DNA, compl... 86 1e-15
CP000628_429(CP000628|pid:none) Agrobacterium radiobacter K84 ch... 86 1e-15
DQ469313_1(DQ469313|pid:none) Rhodococcus opacus trehalose-phosp... 86 1e-15
AM260479_428(AM260479|pid:none) Ralstonia eutropha H16 chromosom... 86 1e-15
(Q743L8) RecName: Full=Trehalose-phosphate synthase; Sh... 85 2e-15
(A0QAK7) RecName: Full=Trehalose-phosphate synthase; Sh... 85 2e-15
AY690425_1(AY690425|pid:none) Dunaliella viridis strain SHU treh... 85 2e-15
CP000431_90(CP000431|pid:none) Rhodococcus jostii RHA1, complete... 85 2e-15
CP000378_673(CP000378|pid:none) Burkholderia cenocepacia AU 1054... 85 2e-15
AM920436_137(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 85 2e-15
BT061172_1(BT061172|pid:none) Zea mays full-length cDNA clone ZM... 85 2e-15
AP008957_968(AP008957|pid:none) Rhodococcus erythropolis PR4 DNA... 84 3e-15
AP008209_786(AP008209|pid:none) Oryza sativa (japonica cultivar-... 84 3e-15
CU633749_368(CU633749|pid:none) Cupriavidus taiwanensis str. LMG... 84 4e-15
CP000577_2590(CP000577|pid:none) Rhodobacter sphaeroides ATCC 17... 84 4e-15
(A0PUT6) RecName: Full=Trehalose-phosphate synthase; Sh... 84 4e-15
CP001614_3169(CP001614|pid:none) Teredinibacter turnerae T7901, ... 84 4e-15
CP000143_2563(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 c... 84 4e-15
(P55612) RecName: Full=Probable alpha,alpha-trehalose-phosphate ... 84 4e-15
AM477810_1(AM477810|pid:none) Vitis vinifera contig VV78X188344.... 84 4e-15
(A4T7Q6) RecName: Full=Trehalose-phosphate synthase; Sh... 84 4e-15
CP000477_785(CP000477|pid:none) Methanosaeta thermophila PT, com... 84 5e-15
CP000850_3367(CP000850|pid:none) Salinispora arenicola CNS-205, ... 84 5e-15
(B2HHY2) RecName: Full=Trehalose-phosphate synthase; Sh... 84 5e-15
AM902716_277(AM902716|pid:none) Bordetella petrii strain DSM 128... 83 6e-15
CP000458_1156(CP000458|pid:none) Burkholderia cenocepacia HI2424... 83 6e-15
CP000140_3812(CP000140|pid:none) Parabacteroides distasonis ATCC... 83 6e-15
CU695240_616(CU695240|pid:none) Ralstonia solanacearum strain Mo... 83 6e-15
(A3Q6H9) RecName: Full=Trehalose-phosphate synthase; Sh... 83 6e-15
AM747720_1034(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 83 8e-15
(A1UM30) RecName: Full=Trehalose-phosphate synthase; Sh... 83 8e-15
CP001025_1028(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 83 8e-15
CP000440_1032(CP000440|pid:none) Burkholderia ambifaria AMMD chr... 83 8e-15
AL646053_1106(AL646053|pid:none) Ralstonia solanacearum GMI1000 ... 83 8e-15
CU914166_1073(CU914166|pid:none) Ralstonia solanacearum strain I... 83 8e-15
CP001052_1901(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 83 8e-15
CP000614_1059(CP000614|pid:none) Burkholderia vietnamiensis G4 c... 83 8e-15
CP000884_5851(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 82 1e-14
AP005577_11(AP005577|pid:none) Oryza sativa Japonica Group genom... 82 1e-14
A67852_1(A67852|pid:none) Sequence 24 from Patent WO9742326. 82 1e-14
AC183498_50(AC183498|pid:none) Brassica oleracea, *** SEQUENCING... 82 1e-14
A67854_1(A67854|pid:none) Sequence 26 from Patent WO9742326. 82 1e-14
CP000667_3220(CP000667|pid:none) Salinispora tropica CNB-440, co... 82 1e-14
(A1TFL3) RecName: Full=Trehalose-phosphate synthase; Sh... 82 1e-14
J04450_4(J04450|pid:none) Yeast (S.cerevisiae) vacuolar H+-ATPas... 82 2e-14
DQ469314_1(DQ469314|pid:none) Rhodococcus opacus trehalose-phosp... 82 2e-14
CR931997_332(CR931997|pid:none) Corynebacterium jeikeium K411 co... 82 2e-14
CU633870_115(CU633870|pid:none) Podospora anserina genomic DNA c... 82 2e-14
CP000667_3489(CP000667|pid:none) Salinispora tropica CNB-440, co... 82 2e-14
AE014134_764(AE014134|pid:none) Drosophila melanogaster chromoso... 82 2e-14
CP000539_495(CP000539|pid:none) Acidovorax sp. JS42, complete ge... 82 2e-14
CP000615_1648(CP000615|pid:none) Burkholderia vietnamiensis G4 c... 82 2e-14
AM849034_1390(AM849034|pid:none) Clavibacter michiganensis subsp... 81 2e-14
EU878265_1(EU878265|pid:none) Helicoverpa armigera trehalose 6-p... 81 2e-14
CP000758_2692(CP000758|pid:none) Ochrobactrum anthropi ATCC 4918... 81 2e-14
DQ086235_1(DQ086235|pid:none) Helicoverpa armigera trehalose 6-p... 81 2e-14
AL161547_9(AL161547|pid:none) Arabidopsis thaliana DNA chromosom... 81 2e-14
CP000264_2063(CP000264|pid:none) Jannaschia sp. CCS1, complete g... 81 2e-14
AP009152_1853(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, ... 81 2e-14
DQ864008_1(DQ864008|pid:none) Drosophila simulans isolate GA6S t... 81 3e-14
AM270256_10(AM270256|pid:none) Aspergillus niger contig An11c039... 81 3e-14
AP009385_1075(AP009385|pid:none) Burkholderia multivorans ATCC 1... 81 3e-14
BA000035_2504(BA000035|pid:none) Corynebacterium efficiens YS-31... 81 3e-14
CP000441_653(CP000441|pid:none) Burkholderia ambifaria AMMD chro... 81 3e-14
AM711867_1102(AM711867|pid:none) Clavibacter michiganensis subsp... 81 3e-14
AE016822_1051(AE016822|pid:none) Leifsonia xyli subsp. xyli str.... 80 4e-14
CP000943_6479(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 80 4e-14
CP001016_2916(CP001016|pid:none) Beijerinckia indica subsp. indi... 80 4e-14
CP001069_451(CP001069|pid:none) Ralstonia pickettii 12J chromoso... 80 5e-14
CP000860_1587(CP000860|pid:none) Candidatus Desulforudis audaxvi... 80 5e-14
CP000232_1339(CP000232|pid:none) Moorella thermoacetica ATCC 390... 80 5e-14
CP001472_2829(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 80 7e-14
CP001114_2366(CP001114|pid:none) Deinococcus deserti VCD115, com... 80 7e-14
CP000561_1344(CP000561|pid:none) Pyrobaculum calidifontis JCM 11... 80 7e-14
BT068852_1(BT068852|pid:none) Zea mays full-length cDNA clone ZM... 80 7e-14
BX248359_264(BX248359|pid:none) Corynebacterium diphtheriae grav... 80 7e-14
DQ666330_1(DQ666330|pid:none) Ulva prolifera trehalose-6-phosoha... 80 7e-14
CP001503_953(CP001503|pid:none) Burkholderia glumae BGR1 chromos... 80 7e-14
EU626442_4(EU626442|pid:none) Gossypium raimondii clone BAC 031J... 80 7e-14
DQ666328_1(DQ666328|pid:none) Chondrus ocellatus trehalose-6-pho... 80 7e-14
DQ666327_1(DQ666327|pid:none) Gracilaria lemaneiformis trehalose... 80 7e-14
CP000112_2056(CP000112|pid:none) Desulfovibrio desulfuricans G20... 80 7e-14
CP000463_1269(CP000463|pid:none) Rhodopseudomonas palustris BisA... 79 9e-14
AY787169_1(AY787169|pid:none) Propionibacterium freudenreichii s... 79 9e-14
AE017342_262(AE017342|pid:none) Cryptococcus neoformans var. neo... 79 9e-14
CP000139_3158(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 79 9e-14
CP000504_1318(CP000504|pid:none) Pyrobaculum islandicum DSM 4184... 79 9e-14
AE008922_2987(AE008922|pid:none) Xanthomonas campestris pv. camp... 79 9e-14
CP001052_2821(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 79 1e-13
(O65979) RecName: Full=Glucosylglycerol-phosphate synthase; ... 79 1e-13
EU098096_5(EU098096|pid:none) Blumeria graminis f. sp. hordei Av... 79 1e-13
EU626443_2(EU626443|pid:none) Gossypioides kirkii clone BAC 096G... 79 1e-13
CP000512_4134(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 79 1e-13
EU399552_1(EU399552|pid:none) Cryptococcus gattii isolate R265TP... 79 1e-13
CP000959_2644(CP000959|pid:none) Burkholderia cenocepacia MC0-3 ... 79 2e-13
CP000379_933(CP000379|pid:none) Burkholderia cenocepacia AU 1054... 79 2e-13
AB490331_2(AB490331|pid:none) Polypedilum vanderplanki PvTpp, Pv... 78 2e-13
AB490331_3(AB490331|pid:none) Polypedilum vanderplanki PvTpp, Pv... 78 2e-13
AP009386_1125(AP009386|pid:none) Burkholderia multivorans ATCC 1... 78 3e-13
CR382130_585(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 77 3e-13
CP001601_2194(CP001601|pid:none) Corynebacterium aurimucosum ATC... 77 5e-13
AJ006298_1(AJ006298|pid:none) Synechococcus PCC7002 otsA gene. 77 5e-13
CP000750_916(CP000750|pid:none) Kineococcus radiotolerans SRS302... 77 5e-13
CP000270_3173(CP000270|pid:none) Burkholderia xenovorans LB400 c... 77 5e-13
CP000570_2723(CP000570|pid:none) Burkholderia pseudomallei 668 c... 77 6e-13
AP007159_719(AP007159|pid:none) Aspergillus oryzae RIB40 genomic... 77 6e-13
CP000592_242(CP000592|pid:none) Ostreococcus lucimarinus CCE9901... 76 8e-13
CP001408_2894(CP001408|pid:none) Burkholderia pseudomallei MSHR3... 76 1e-12
CP000967_1476(CP000967|pid:none) Xanthomonas oryzae pv. oryzae P... 76 1e-12
CP000124_2833(CP000124|pid:none) Burkholderia pseudomallei 1710b... 76 1e-12
CP000526_2392(CP000526|pid:none) Burkholderia mallei SAVP1 chrom... 76 1e-12
CP001157_4095(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 76 1e-12
BX571965_2430(BX571965|pid:none) Burkholderia pseudomallei strai... 76 1e-12
CP001280_3816(CP001280|pid:none) Methylocella silvestris BL2, co... 76 1e-12
DQ666329_1(DQ666329|pid:none) Ulva pertusa trehalose-6-phosohate... 76 1e-12
AM450692_1(AM450692|pid:none) Vitis vinifera contig VV78X091767.... 76 1e-12
AE013598_1577(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K... 76 1e-12
CP000248_1497(CP000248|pid:none) Novosphingobium aromaticivorans... 75 1e-12
CP000086_1725(CP000086|pid:none) Burkholderia thailandensis E264... 75 2e-12
CP000544_1101(CP000544|pid:none) Halorhodospira halophila SL1, c... 75 2e-12
CP000252_134(CP000252|pid:none) Syntrophus aciditrophicus SB, co... 75 2e-12
AY190523_1(AY190523|pid:none) Emericella nidulans trehalose-6-ph... 75 2e-12
(O80738) RecName: Full=Probable alpha,alpha-trehalose-phosphate ... 75 2e-12
DQ407629_1(DQ407629|pid:none) Hartmannella vermiformis trehalose... 75 2e-12
DQ407630_1(DQ407630|pid:none) Hartmannella vermiformis trehalose... 75 2e-12
EU679406_1(EU679406|pid:none) Callinectes sapidus trehalose 6-ph... 75 2e-12
CP000304_3162(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 74 3e-12
CP000319_3441(CP000319|pid:none) Nitrobacter hamburgensis X14, c... 74 3e-12
AM270317_14(AM270317|pid:none) Aspergillus niger contig An14c010... 74 4e-12
CP000927_1763(CP000927|pid:none) Caulobacter sp. K31, complete g... 74 4e-12
CP001359_474(CP001359|pid:none) Anaeromyxobacter dehalogenans 2C... 74 5e-12
CP001131_480(CP001131|pid:none) Anaeromyxobacter sp. K, complete... 74 5e-12
CP000134_87(CP000134|pid:none) Rhizobium etli CFN 42 plasmid p42... 74 5e-12
FJ501960_1(FJ501960|pid:none) Harmonia axyridis trehalose 6-phos... 74 5e-12
CP000230_2480(CP000230|pid:none) Rhodospirillum rubrum ATCC 1117... 74 5e-12
AP007151_1316(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 73 7e-12
(Q9UUI7) RecName: Full=Putative alpha,alpha-trehalose-phosphate ... 73 7e-12
BA000012_551(BA000012|pid:none) Mesorhizobium loti MAFF303099 DN... 73 9e-12
CR382139_531(CR382139|pid:none) Debaryomyces hansenii strain CBS... 72 1e-11
CP000115_3006(CP000115|pid:none) Nitrobacter winogradskyi Nb-255... 72 1e-11
CP000283_1026(CP000283|pid:none) Rhodopseudomonas palustris BisB... 72 1e-11
CP000250_1019(CP000250|pid:none) Rhodopseudomonas palustris HaA2... 72 1e-11
CP000251_1436(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 72 1e-11
AY628139_1(AY628139|pid:none) Gossypium hirsutum cultivar Siokra... 72 2e-11
AY628140_1(AY628140|pid:none) Gossypium hirsutum cultivar Acala ... 72 2e-11
CP000781_1707(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 72 2e-11
FN392320_789(FN392320|pid:none) Pichia pastoris GS115 chromosome... 72 2e-11
CP000832_41(CP000832|pid:none) Dinoroseobacter shibae DFL 12 pla... 71 2e-11
AM920435_625(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 71 3e-11
(Q9ZV48) RecName: Full=Probable alpha,alpha-trehalose-phosphate ... 70 4e-11
AE017261_1209(AE017261|pid:none) Picrophilus torridus DSM 9790, ... 70 4e-11
AE008922_3034(AE008922|pid:none) Xanthomonas campestris pv. camp... 70 4e-11
AY275558_1(AY275558|pid:none) Thermus thermophilus RQ-1 trehalos... 70 4e-11
CP000777_2476(CP000777|pid:none) Leptospira biflexa serovar Pato... 70 6e-11
CR543861_1626(CR543861|pid:none) Acinetobacter sp. ADP1 complete... 70 6e-11
DQ121375_3(DQ121375|pid:none) Uncultured bacterium clone YC01A01... 70 7e-11
CP000251_448(CP000251|pid:none) Anaeromyxobacter dehalogenans 2C... 70 7e-11
CP000116_2626(CP000116|pid:none) Thiobacillus denitrificans ATCC... 70 7e-11
(P74258) RecName: Full=Glucosylglycerol-phosphate synthase; ... 70 7e-11
CP001131_2403(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 69 9e-11
CU928167_183(CU928167|pid:none) Kluyveromyces thermotolerans str... 69 9e-11
CP000474_889(CP000474|pid:none) Arthrobacter aurescens TC1, comp... 69 9e-11
CP000141_653(CP000141|pid:none) Carboxydothermus hydrogenoforman... 69 1e-10
AC186754_2(AC186754|pid:none) Musa balbisiana clone MBP_81C12, c... 69 2e-10
BT085404_1(BT085404|pid:none) Zea mays full-length cDNA clone ZM... 69 2e-10
EF187285_1(EF187285|pid:none) Brassica juncea putative trehalose... 69 2e-10
CP000473_1134(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 68 2e-10
CR380954_95(CR380954|pid:none) Candida glabrata strain CBS138 ch... 68 2e-10
CP000769_2372(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 68 2e-10
AM743169_3536(AM743169|pid:none) Stenotrophomonas maltophilia K2... 68 2e-10
BX572608_14(BX572608|pid:none) Rhodopseudomonas palustris CGA009... 68 2e-10
EU952082_1(EU952082|pid:none) Zea mays clone 1158867 trehalose 6... 68 3e-10
FM992689_969(FM992689|pid:none) Candida dubliniensis CD36 chromo... 68 3e-10
CP000454_749(CP000454|pid:none) Arthrobacter sp. FB24, complete ... 68 3e-10
CP000774_308(CP000774|pid:none) Parvibaculum lavamentivorans DS-... 67 4e-10
CR380953_221(CR380953|pid:none) Candida glabrata strain CBS138 c... 67 4e-10
AM920436_493(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 67 4e-10
CP000463_4512(CP000463|pid:none) Rhodopseudomonas palustris BisA... 67 4e-10
AF148854_1(AF148854|pid:none) Pichia angusta trehalose phosphate... 67 5e-10
AM118080_61(AM118080|pid:none) Ustilago hordei mating type regio... 67 5e-10
CP000453_7(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-1, ... 67 6e-10
(P31688) RecName: Full=Trehalose-phosphatase; EC=3.1.3.... 67 6e-10
M88172_4(M88172|pid:none) Saccharomyces cerevisiae homolog of th... 65 1e-09
(P38426) RecName: Full=Trehalose synthase complex regulatory sub... 65 1e-09
AY596297_209(AY596297|pid:none) Haloarcula marismortui ATCC 4304... 65 2e-09
FN392319_48(FN392319|pid:none) Pichia pastoris GS115 chromosome ... 65 2e-09
AP009389_560(AP009389|pid:none) Pelotomaculum thermopropionicum ... 65 2e-09
FJ360766_1(FJ360766|pid:none) Meiothermus ruber trehalose-phosph... 65 2e-09
CP000500_340(CP000500|pid:none) Pichia stipitis CBS 6054 chromos... 64 4e-09
CP000394_746(CP000394|pid:none) Granulibacter bethesdensis CGDNI... 64 5e-09
AE016818_617(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 64 5e-09
AE016820_501(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 63 7e-09
CP001328_525(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 63 7e-09
AM920433_633(AM920433|pid:none) Penicillium chrysogenum Wisconsi... 63 9e-09
(O14081) RecName: Full=Putative alpha,alpha-trehalose-phosphate ... 63 9e-09
CU928179_556(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 63 9e-09
AC132491_2(AC132491|pid:none) Oryza sativa (japonica cultivar-gr... 63 9e-09
AE017180_2324(AE017180|pid:none) Geobacter sulfurreducens PCA, c... 61 3e-08
DQ407643_1(DQ407643|pid:none) Physarum polycephalum trehalose ph... 61 3e-08
(O14145) RecName: Full=Trehalose-phosphatase; EC=3.1.3.... 60 4e-08
CR382131_1273(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 60 6e-08
CU928180_321(CU928180|pid:none) Kluyveromyces thermotolerans str... 60 8e-08
CP000521_837(CP000521|pid:none) Acinetobacter baumannii ATCC 179... 59 1e-07
DQ364059_1(DQ364059|pid:none) Saccharomycopsis fibuligera trehal... 59 1e-07
CU928179_606(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 59 2e-07
CR382125_492(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 58 2e-07
CR380956_271(CR380956|pid:none) Candida glabrata strain CBS138 c... 58 2e-07
AM920439_74(AM920439|pid:none) Penicillium chrysogenum Wisconsin... 57 4e-07
CP001230_18(CP001230|pid:none) Persephonella marina EX-H1, compl... 57 4e-07
AF054514_1(AF054514|pid:none) Synechococcus PCC7002 alpha,alpha-... 57 6e-07
AP008215_498(AP008215|pid:none) Oryza sativa (japonica cultivar-... 55 1e-06
(P78875) RecName: Full=Trehalose-phosphatase; EC=3.1.3.... 55 2e-06
CP001089_1788(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 54 5e-06
AY787135_1(AY787135|pid:none) Glomus mosseae trehalose 6P phosph... 53 9e-06
L40359_1(L40359|pid:none) Schizosaccharomyces pombe phosphatidat... 52 2e-05
AE000666_1714(AE000666|pid:none) Methanothermobacter thermautotr... 49 1e-04
S08523(S08523) hypothetical protein 3 (5S rRNA 3' region) - Meth... 49 1e-04
CT573213_2218(CT573213|pid:none) Frankia alni str. ACN14A chromo... 49 1e-04
CP000249_1460(CP000249|pid:none) Frankia sp. CcI3, complete geno... 48 3e-04
AJ505946_1(AJ505946|pid:none) Carica papaya partial mRNA for put... 46 9e-04
AM453224_2(AM453224|pid:none) Vitis vinifera contig VV78X154701.... 44 0.004
CP000820_176(CP000820|pid:none) Frankia sp. EAN1pec, complete ge... 43 0.010
A67838_1(A67838|pid:none) Sequence 10 from Patent WO9742326. 42 0.016
EU881704_2(EU881704|pid:none) Rubrobacter xylanophilus trehalose... 42 0.016
CP000386_2901(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 41 0.028
CP001275_362(CP001275|pid:none) Thermomicrobium roseum DSM 5159,... 40 0.081
BA000030_3943(BA000030|pid:none) Streptomyces avermitilis MA-468... 39 0.18
AE015928_356(AE015928|pid:none) Bacteroides thetaiotaomicron VPI... 38 0.31
CP000249_4346(CP000249|pid:none) Frankia sp. CcI3, complete geno... 35 2.0
CP001279_992(CP001279|pid:none) Nautilia profundicola AmH, compl... 34 3.4
AY458647_93(AY458647|pid:none) Uncultured marine bacterium 580 c... 33 5.8
X77933_1(X77933|pid:none) R.norvegicus mRNA for sodium channel, ... 33 9.8
EU627517_1(EU627517|pid:none) Rattus norvegicus amiloride sensit... 33 9.8

>(Q54NU9) RecName: Full=Alpha,alpha-trehalose-phosphate synthase
[UDP-forming] B; EC=2.4.1.15; AltName:
Full=Trehalose-6-phosphate synthase B; AltName:
Full=UDP-glucose-glucosephosphate glucosyltransferase B;
Length = 790

Score = 134 bits (337), Expect = 2e-30
Identities = 63/147 (42%), Positives = 95/147 (64%)
Frame = +1

Query: 202 INETVARINGEYGKVGTIPIQYINRFVDYEEICSFFQVADILLSAPLREGMNLDTHDFVA 381
+NE V RING++GK+ PI+YIN+ + YEE+ + +++ADI L P+R+GMNL +H++V
Sbjct: 384 VNEMVGRINGKFGKLSFNPIEYINKKISYEELSALYKLADIALITPIRDGMNLTSHEYVV 443

Query: 382 SHRIKNSNGYDNNDKPGILILSEFDGASRCFSGAILVNPYSVNQISQGIETAFHLKNEEA 561
+ D G+LILSEF GA+RC G+I+VNP+S +I + I A ++ +
Sbjct: 444 CQK----------DNFGVLILSEFAGAARCLGGSIIVNPFSKKEIMEAIIEALNMSMHDR 493

Query: 562 VIKHNQNLEYVMTNTSYLWGEAFLYDI 642
+KH N YV+ NTS WG+ FL D+
Sbjct: 494 KLKHQINYNYVLANTSSFWGKRFLCDL 520

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 778,658,830
Number of extensions: 14306619
Number of successful extensions: 32419
Number of sequences better than 10.0: 342
Number of HSP's gapped: 32031
Number of HSP's successfully gapped: 342
Length of query: 221
Length of database: 1,051,180,864
Length adjustment: 124
Effective length of query: 97
Effective length of database: 649,847,548
Effective search space: 63035212156
Effective search space used: 63035212156
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)

PSORT

psg: 0.83 gvh: 0.54 alm: 0.39 top: 0.53 tms: 0.00 mit: 0.27 mip: 0.11
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

48.0 %: nuclear
28.0 %: cytoplasmic
16.0 %: mitochondrial
8.0 %: cytoskeletal

>> prediction for Contig-U13433-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0