Homology vs CSM-cDNA |
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Homology vs DNA |
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Homology vs Protein |
Query= Contig-U13432-1 (Contig-U13432-1Q) /CSM_Contig/Contig-U13432-1Q.Seq.d (1142 letters)
Database: nrp_B 3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
AM920436_1502(AM920436|pid:none) Penicillium chrysogenum Wiscons... 78 5e-13 (P28584) RecName: Full=Low-affinity potassium transport protein;... 72 3e-11 AL627362_58(AL627362|pid:none) DNA centromeric region sequence f... 72 5e-11 CP000500_442(CP000500|pid:none) Pichia stipitis CBS 6054 chromos... 69 2e-10 AM921700_1(AM921700|pid:none) Aspergillus flavus second gene clu... 68 7e-10 AP007171_620(AP007171|pid:none) Aspergillus oryzae RIB40 genomic... 67 9e-10 AF136181_1(AF136181|pid:none) Kluyveromyces lactis potassium tra... 67 9e-10 CR382125_665(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 67 9e-10 CR380958_243(CR380958|pid:none) Candida glabrata strain CBS138 c... 67 2e-09 (Q10065) RecName: Full=Potassium transport protein 2; &AF266750... 66 3e-09 AE016819_18(AE016819|pid:none) Ashbya gossypii (= Eremothecium g... 65 3e-09 (P12685) RecName: Full=High-affinity potassium transport protein... 65 6e-09 AM270374_9(AM270374|pid:none) Aspergillus niger contig An16c0220... 64 1e-08 AM270049_13(AM270049|pid:none) Aspergillus niger contig An03c008... 64 1e-08 FM992695_705(FM992695|pid:none) Candida dubliniensis CD36 chromo... 64 1e-08 AP007162_287(AP007162|pid:none) Aspergillus oryzae RIB40 genomic... 63 2e-08 FN392320_1182(FN392320|pid:none) Pichia pastoris GS115 chromosom... 62 3e-08 AF267125_1(AF267125|pid:none) Candida albicans potassium transpo... 62 5e-08 CU928176_135(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 61 6e-08 AM920436_2309(AM920436|pid:none) Penicillium chrysogenum Wiscons... 60 1e-07 AF176036_1(AF176036|pid:none) Eucalyptus camaldulensis potassium... 59 4e-07 AB234303_1(AB234303|pid:none) Phragmites australis PhaHKT1-u mRN... 58 5e-07 AB234304_1(AB234304|pid:none) Phragmites australis PhaHKT1-n mRN... 56 2e-06 CR382128_713(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 56 3e-06 AP007151_920(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 55 5e-06 L36563_1(L36563|pid:none) Schizosaccharomyces pombe K+ transport... 54 1e-05 AF367366_1(AF367366|pid:none) Mesembryanthemum crystallinum puta... 53 2e-05 AM396517_1(AM396517|pid:none) Hebeloma cylindrosporum trk gene f... 52 3e-05 AM478758_2(AM478758|pid:none) Vitis vinifera contig VV78X220671.... 51 7e-05 AM424979_1(AM424979|pid:none) Vitis vinifera contig VV78X191242.... 51 9e-05 DQ374749_1(DQ374749|pid:none) Oryza barthii clone HKT912 HKT1 pr... 50 1e-04 (A2YGP9) RecName: Full=Cation transporter HKT1; Short=O... 50 1e-04 AE017343_474(AE017343|pid:none) Cryptococcus neoformans var. neo... 50 1e-04 DQ374774_1(DQ374774|pid:none) Oryza rufipogon clone HKT910 HKT1 ... 50 1e-04 DQ374748_1(DQ374748|pid:none) Oryza barthii clone HKT911 HKT1 pr... 50 1e-04 AY885801_1(AY885801|pid:none) Oryza barthii isolate HKT01 HKT1 g... 50 2e-04 AY885828_1(AY885828|pid:none) Oryza rufipogon isolate HKT33 HKT1... 50 2e-04 DQ374757_1(DQ374757|pid:none) Oryza nivara clone HKT920 HKT1 pro... 50 2e-04 AY885802_1(AY885802|pid:none) Oryza longistaminata isolate HKT04... 50 2e-04 (Q93XI5) RecName: Full=Cation transporter HKT2; Short=O... 50 2e-04 DQ912169_1(DQ912169|pid:none) Hordeum vulgare subsp. vulgare sod... 49 4e-04 AM000056_1(AM000056|pid:none) Hordeum vulgare mRNA for high-affi... 48 6e-04 AP007150_474(AP007150|pid:none) Aspergillus oryzae RIB40 genomic... 48 6e-04 CP000806_389(CP000806|pid:none) Cyanothece sp. ATCC 51142 circul... 47 0.002 AM430592_1(AM430592|pid:none) Vitis vinifera contig VV78X013968.... 46 0.002 (Q0JNB6) RecName: Full=Cation transporter HKT8; Short=O... 46 0.002 DQ646338_1(DQ646338|pid:none) Triticum aestivum HKT8 (HKT8) mRNA... 46 0.002 DQ148410_1(DQ148410|pid:none) Oryza sativa (indica cultivar-grou... 46 0.002 DQ646334_1(DQ646334|pid:none) Triticum turgidum subsp. durum HKT... 45 0.004 EU643495_1(EU643495|pid:none) Adineta vaga clone 210B3 endo-xylo... 45 0.005 DQ646333_1(DQ646333|pid:none) Triticum turgidum subsp. durum HKT... 45 0.005 AF237672_1(AF237672|pid:none) Arabidopsis thaliana sodium transp... 45 0.006 AL049488_11(AL049488|pid:none) Arabidopsis thaliana DNA chromoso... 45 0.006 (Q84TI7) RecName: Full=Sodium transporter HKT1; Short=A... 45 0.006 AF096373_2(AF096373|pid:none) Arabidopsis thaliana BAC T9A4. &T... 45 0.006 CP000557_3159(CP000557|pid:none) Geobacillus thermodenitrificans... 44 0.008 CP000922_1288(CP000922|pid:none) Anoxybacillus flavithermus WK1,... 44 0.008 CP000454_3728(CP000454|pid:none) Arthrobacter sp. FB24, complete... 44 0.011 AJ938182_889(AJ938182|pid:none) Staphylococcus aureus RF122 comp... 44 0.014 CP000264_3549(CP000264|pid:none) Jannaschia sp. CCS1, complete g... 43 0.018 AE017333_3110(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 43 0.018 BA000022_1438(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,... 43 0.018 CR855143_13(CR855143|pid:none) Oryza sativa genomic DNA, chromos... 43 0.024 AE017262_1001(AE017262|pid:none) Listeria monocytogenes str. 4b ... 42 0.031 CP001175_1604(CP001175|pid:none) Listeria monocytogenes HCC23, c... 42 0.031 CP000158_1307(CP000158|pid:none) Hyphomonas neptunium ATCC 15444... 42 0.031 CT009752_15(CT009752|pid:none) Trypanosoma brucei chromosome 10,... 42 0.041 CP000724_1570(CP000724|pid:none) Alkaliphilus metalliredigens QY... 42 0.041 CP000227_1362(CP000227|pid:none) Bacillus cereus Q1, complete ge... 42 0.041 AP009552_1865(AP009552|pid:none) Microcystis aeruginosa NIES-843... 42 0.041 CP001341_2822(CP001341|pid:none) Arthrobacter chlorophenolicus A... 42 0.041 CP000393_3390(CP000393|pid:none) Trichodesmium erythraeum IMS101... 42 0.041 CP000789_1323(CP000789|pid:none) Vibrio harveyi ATCC BAA-1116 ch... 42 0.053 D89592_3(D89592|pid:none) Vibrio alginolyticus rhlE, KtrA and Kt... 42 0.053 AG1556(AG1556) Na+-transporting ATP synthase chain J homolog lin... 41 0.069 CP000081_9(CP000081|pid:none) Leishmania major chromosome 35, co... 41 0.069 BA000028_1388(BA000028|pid:none) Oceanobacillus iheyensis HTE831... 41 0.069 BA000039_303(BA000039|pid:none) Thermosynechococcus elongatus BP... 41 0.069 AP008231_469(AP008231|pid:none) Synechococcus elongatus PCC 6301... 41 0.069 CP000100_1078(CP000100|pid:none) Synechococcus elongatus PCC 794... 41 0.069 CP000117_4776(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 41 0.069 CP001037_5511(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 41 0.090 AP009324_1994(AP009324|pid:none) Staphylococcus aureus subsp. au... 41 0.090 AM502253_17(AM502253|pid:none) Leishmania infantum chromosome 35. 41 0.090 BX571856_2064(BX571856|pid:none) Staphylococcus aureus subsp. au... 41 0.090 AM292600_27(AM292600|pid:none) Staphylococcus aureus antibiotic ... 41 0.090 AD2031(AD2031) hypothetical protein all1802 [imported] - Nostoc ... 40 0.12 FM954973_384(FM954973|pid:none) Vibrio splendidus LGP32 chromoso... 40 0.12 CP001287_3883(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 40 0.15 AM263198_976(AM263198|pid:none) Listeria welshimeri serovar 6b s... 40 0.15 BA000004_598(BA000004|pid:none) Bacillus halodurans C-125 DNA, c... 40 0.15 CP000609_148(CP000609|pid:none) Methanococcus maripaludis C5, co... 40 0.15 AE017333_1414(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 40 0.15 CP000395_731(CP000395|pid:none) Borrelia afzelii PKo, complete g... 40 0.15 AP009484_1686(AP009484|pid:none) Macrococcus caseolyticus JCSC54... 40 0.20 CP000951_2228(CP000951|pid:none) Synechococcus sp. PCC 7002, com... 40 0.20 BA000043_212(BA000043|pid:none) Geobacillus kaustophilus HTA426 ... 40 0.20 (O32081) RecName: Full=Ktr system potassium uptake protein B; ... 40 0.20 BA000032_1430(BA000032|pid:none) Vibrio parahaemolyticus RIMD 22... 40 0.20 AE016830_273(AE016830|pid:none) Enterococcus faecalis V583, comp... 39 0.26 DQ646335_1(DQ646335|pid:none) Triticum turgidum subsp. durum tru... 39 0.26 CP001071_1111(CP001071|pid:none) Akkermansia muciniphila ATCC BA... 39 0.26 CP000867_1230(CP000867|pid:none) Methanococcus maripaludis C6, c... 39 0.26 CP001251_253(CP001251|pid:none) Dictyoglomus turgidum DSM 6724, ... 39 0.26 CP001276_345(CP001276|pid:none) Thermomicrobium roseum DSM 5159 ... 39 0.26 AP008934_2353(AP008934|pid:none) Staphylococcus saprophyticus su... 39 0.26 CP001102_968(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 39 0.26 CP000013_713(CP000013|pid:none) Borrelia garinii PBi, complete g... 39 0.34 CP000568_1639(CP000568|pid:none) Clostridium thermocellum ATCC 2... 39 0.45 AE014299_4164(AE014299|pid:none) Shewanella oneidensis MR-1, com... 39 0.45 CP000576_97(CP000576|pid:none) Prochlorococcus marinus str. MIT ... 39 0.45 CP000817_1250(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 39 0.45 CP001133_442(CP001133|pid:none) Vibrio fischeri MJ11 chromosome ... 39 0.45 CR378676_18(CR378676|pid:none) Photobacterium profundum SS9 chro... 39 0.45 CP000082_1607(CP000082|pid:none) Psychrobacter arcticus 273-4, c... 39 0.45 CP000159_2215(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 39 0.45 CP001146_1911(CP001146|pid:none) Dictyoglomus thermophilum H-6-1... 39 0.45 CP001098_1157(CP001098|pid:none) Halothermothrix orenii H 168, c... 38 0.59 CP000924_2013(CP000924|pid:none) Thermoanaerobacter pseudethanol... 38 0.59 CT971583_2178(CT971583|pid:none) Synechococcus WH7803 complete g... 38 0.59 CP000359_1570(CP000359|pid:none) Deinococcus geothermalis DSM 11... 38 0.59 CP000521_2114(CP000521|pid:none) Acinetobacter baumannii ATCC 17... 38 0.59 BT064033_1(BT064033|pid:none) Zea mays full-length cDNA clone ZM... 38 0.59 CR855143_11(CR855143|pid:none) Oryza sativa genomic DNA, chromos... 38 0.77 AE017355_1185(AE017355|pid:none) Bacillus thuringiensis serovar ... 38 0.77 CP000485_1114(CP000485|pid:none) Bacillus thuringiensis str. Al ... 38 0.77 CP001177_1318(CP001177|pid:none) Bacillus cereus AH187, complete... 38 0.77 AE016879_1226(AE016879|pid:none) Bacillus anthracis str. Ames, c... 38 0.77 CP000248_396(CP000248|pid:none) Novosphingobium aromaticivorans ... 38 0.77 CP000446_50(CP000446|pid:none) Shewanella sp. MR-4, complete gen... 38 0.77 AP006618_2111(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 38 0.77 AE017194_1425(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 38 0.77 CP001172_1494(CP001172|pid:none) Acinetobacter baumannii AB307-0... 38 0.77 CP000227_1291(CP000227|pid:none) Bacillus cereus Q1, complete ge... 38 0.77 CP000469_57(CP000469|pid:none) Shewanella sp. ANA-3, complete ge... 38 0.77 AE000520_139(AE000520|pid:none) Treponema pallidum subsp. pallid... 37 1.00 CP000252_1846(CP000252|pid:none) Syntrophus aciditrophicus SB, c... 37 1.00 AP006716_1935(AP006716|pid:none) Staphylococcus haemolyticus JCS... 37 1.00 CP000860_517(CP000860|pid:none) Candidatus Desulforudis audaxvia... 37 1.00 CP001176_1246(CP001176|pid:none) Bacillus cereus B4264, complete... 37 1.00 CP001034_103(CP001034|pid:none) Natranaerobius thermophilus JW/N... 37 1.00 CP000828_3479(CP000828|pid:none) Acaryochloris marina MBIC11017,... 37 1.00 CP000444_49(CP000444|pid:none) Shewanella sp. MR-7, complete gen... 37 1.00 AE014299_57(AE014299|pid:none) Shewanella oneidensis MR-1, compl... 37 1.00 AE016823_264(AE016823|pid:none) Leptospira interrogans serovar C... 37 1.00 CP000745_669(CP000745|pid:none) Methanococcus maripaludis C7, co... 37 1.00 BX548175_2112(BX548175|pid:none) Prochlorococcus marinus MIT9313... 37 1.3 AL935258_102(AL935258|pid:none) Lactobacillus plantarum strain W... 37 1.3 CP001022_2836(CP001022|pid:none) Exiguobacterium sibiricum 255-1... 37 1.3 CP001348_2037(CP001348|pid:none) Clostridium cellulolyticum H10,... 37 1.3 CP000680_3546(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 37 1.3 AE017226_309(AE017226|pid:none) Treponema denticola ATCC 35405, ... 37 1.3 BX569694_352(BX569694|pid:none) Synechococcus sp. WH8102 complet... 37 1.3 CP000111_90(CP000111|pid:none) Prochlorococcus marinus str. MIT ... 37 1.3 CP001615_2225(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 37 1.3 CP001098_1158(CP001098|pid:none) Halothermothrix orenii H 168, c... 37 1.3 CP000554_254(CP000554|pid:none) Prochlorococcus marinus str. MIT... 37 1.3 CP000909_203(CP000909|pid:none) Chloroflexus aurantiacus J-10-fl... 37 1.3 CP000049_695(CP000049|pid:none) Borrelia turicatae 91E135, compl... 37 1.7 CP000993_682(CP000993|pid:none) Borrelia recurrentis A1, complet... 37 1.7 CP000133_484(CP000133|pid:none) Rhizobium etli CFN 42, complete ... 37 1.7 AE016879_1217(AE016879|pid:none) Bacillus anthracis str. Ames, c... 37 1.7 AE017225_1202(AE017225|pid:none) Bacillus anthracis str. Sterne,... 37 1.7 AE016877_1183(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 37 1.7 EF062819_1(EF062819|pid:none) Triticum monococcum putative sodiu... 37 1.7 CP000503_3981(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 37 1.7 CP000815_620(CP000815|pid:none) Paulinella chromatophora chromat... 37 1.7 CP000962_3118(CP000962|pid:none) Clostridium botulinum A3 str. L... 37 1.7 CP000853_1943(CP000853|pid:none) Alkaliphilus oremlandii OhILAs,... 37 1.7 CP000563_4233(CP000563|pid:none) Shewanella baltica OS155, compl... 37 1.7 CP000001_1183(CP000001|pid:none) Bacillus cereus E33L, complete ... 37 1.7 CP001176_1237(CP001176|pid:none) Bacillus cereus B4264, complete... 37 1.7 AE017308_427(AE017308|pid:none) Mycoplasma mobile 163K complete ... 37 1.7 CP001638_408(CP001638|pid:none) Geobacillus sp. WCH70, complete ... 36 2.2 CP001087_1620(CP001087|pid:none) Desulfobacterium autotrophicum ... 36 2.2 AP009152_1510(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, ... 36 2.2 AM295250_440(AM295250|pid:none) Staphylococcus carnosus subsp. c... 36 2.2 CP000435_2469(CP000435|pid:none) Synechococcus sp. CC9311, compl... 36 2.2 CP001186_1200(CP001186|pid:none) Bacillus cereus G9842, complete... 36 2.2 AE017194_1416(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 36 2.2 CP000903_1203(CP000903|pid:none) Bacillus weihenstephanensis KBA... 36 2.2 CP001618_3246(CP001618|pid:none) Beutenbergia cavernae DSM 12333... 36 2.2 CP000140_755(CP000140|pid:none) Parabacteroides distasonis ATCC ... 36 2.2 CP000262_272(CP000262|pid:none) Streptococcus pyogenes MGAS10750... 36 2.9 CP000891_54(CP000891|pid:none) Shewanella baltica OS195, complet... 36 2.9 (O31658) RecName: Full=Ktr system potassium uptake protein D; ... 36 2.9 AP009389_457(AP009389|pid:none) Pelotomaculum thermopropionicum ... 36 2.9 CP000056_268(CP000056|pid:none) Streptococcus pyogenes MGAS6180,... 36 2.9 CP001078_1578(CP001078|pid:none) Clostridium botulinum E3 str. A... 36 2.9 AE009949_242(AE009949|pid:none) Streptococcus pyogenes MGAS8232,... 36 2.9 AE004092_239(AE004092|pid:none) Streptococcus pyogenes M1 GAS, c... 36 2.9 CP000110_2263(CP000110|pid:none) Synechococcus sp. CC9605, compl... 36 2.9 CP000764_995(CP000764|pid:none) Bacillus cereus subsp. cytotoxis... 36 2.9 CP001056_1773(CP001056|pid:none) Clostridium botulinum B str. Ek... 36 2.9 CT978603_1570(CT978603|pid:none) Synechococcus sp. RCC307 genomi... 35 3.8 G53610(G53610)ntpJ protein - Enterococcus hirae 35 3.8 CP000088_2295(CP000088|pid:none) Thermobifida fusca YX, complete... 35 3.8 (P43440) RecName: Full=V-type sodium ATP synthase subunit J; ... 35 3.8 CP000095_131(CP000095|pid:none) Prochlorococcus marinus str. NAT... 35 3.8 BX248359_232(BX248359|pid:none) Corynebacterium diphtheriae grav... 35 3.8 CP000025_1432(CP000025|pid:none) Campylobacter jejuni RM1221, co... 35 3.8 CP000768_356(CP000768|pid:none) Campylobacter jejuni subsp. doyl... 35 3.8 CR555306_1540(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 35 3.8 CP000817_3562(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 35 3.8 CP000878_94(CP000878|pid:none) Prochlorococcus marinus str. MIT ... 35 3.8 CP001281_434(CP001281|pid:none) Thauera sp. MZ1T, complete genome. 35 3.8 CP000560_1242(CP000560|pid:none) Bacillus amyloliquefaciens FZB4... 35 3.8 CP000553_151(CP000553|pid:none) Prochlorococcus marinus str. NAT... 35 3.8 CP001129_1615(CP001129|pid:none) Streptococcus equi subsp. zooep... 35 5.0 CP001581_3342(CP001581|pid:none) Clostridium botulinum A2 str. K... 35 5.0 FM204884_305(FM204884|pid:none) Streptococcus equi subsp. zooepi... 35 5.0 CP001358_618(CP001358|pid:none) Desulfovibrio desulfuricans subs... 35 5.0 AE017355_680(AE017355|pid:none) Bacillus thuringiensis serovar k... 35 5.0 CP000932_134(CP000932|pid:none) Campylobacter lari RM2100, compl... 35 5.0 CP000316_213(CP000316|pid:none) Polaromonas sp. JS666, complete ... 35 5.0 CP000850_437(CP000850|pid:none) Salinispora arenicola CNS-205, c... 35 5.0 AY849557_15(AY849557|pid:none) Lactococcus lactis plasmid pGdh44... 35 5.0 CP001601_143(CP001601|pid:none) Corynebacterium aurimucosum ATCC... 35 5.0 CP000939_3142(CP000939|pid:none) Clostridium botulinum B1 str. O... 35 5.0 AM412317_3142(AM412317|pid:none) Clostridium botulinum A str. AT... 35 5.0 CP000232_1715(CP000232|pid:none) Moorella thermoacetica ATCC 390... 35 5.0 CP001620_839(CP001620|pid:none) Corynebacterium kroppenstedtii D... 35 6.5 CP000885_1904(CP000885|pid:none) Clostridium phytofermentans ISD... 35 6.5 CP000414_45(CP000414|pid:none) Leuconostoc mesenteroides subsp. ... 35 6.5 AP007281_1464(AP007281|pid:none) Lactobacillus reuteri JCM 1112 ... 35 6.5 CP001108_1780(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 35 6.5 CP001117_63(CP001117|pid:none) Deinococcus deserti VCD115 plasmi... 35 6.5 CR931997_347(CR931997|pid:none) Corynebacterium jeikeium K411 co... 35 6.5 AP008971_871(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 35 6.5 CP000246_2096(CP000246|pid:none) Clostridium perfringens ATCC 13... 35 6.5 CP000947_682(CP000947|pid:none) Haemophilus somnus 2336, complet... 34 8.5 CP000471_3558(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 34 8.5 AM286690_272(AM286690|pid:none) Alcanivorax borkumensis SK2, com... 34 8.5 BA000001_1867(BA000001|pid:none) Pyrococcus horikoshii OT3 DNA, ... 34 8.5 AE015927_2046(AE015927|pid:none) Clostridium tetani E88, complet... 34 8.5 CP001337_3443(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 34 8.5 CP000749_4433(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 34 8.5
>AM920436_1502(AM920436|pid:none) Penicillium chrysogenum Wisconsin 54-1255 complete genome, contig Pc00c21. Length = 835
Score = 78.2 bits (191), Expect = 5e-13 Identities = 54/174 (31%), Positives = 82/174 (47%), Gaps = 7/174 (4%) Frame = +3
Query: 54 MEYRSLGKLLVXXXXXXXXXXXLGFISIGAYIAGSESARSIMKANGVNGWWWSLFHTFSA 233 +EYR+L L V +G +S+ +I + I++A+G+ WW +F + SA Sbjct: 393 IEYRALKTLAVVLITYYIGFHLIGMVSLVGWIMRANKWGDIVRADGIGRPWWGIFTSASA 452
Query: 234 FNNAGLALFSDSLIQINEKYXXXXXXXXXXXXGNTLFPVFLRIILLVVSKFTKDP----E 401 FN+ G L DS+ GNT FP LR+I+ ++SKFT+ E Sbjct: 453 FNDLGFTLTPDSMTSFQRAVFPLLMMSFLIIIGNTAFPCMLRLIIWILSKFTRQGTALWE 512
Query: 402 PYRNLLENPRSIFPLIFSPL*KKTVQLFGKSGVTFNVSPNCIK---WPLLDVND 554 + LL++PR F L+F T LF V+ NCI + +LD+ND Sbjct: 513 ELKFLLDHPRRCFTLLFPR--NATWWLF-----AILVALNCIDVIFFVILDLND 559
Score = 56.2 bits (134), Expect = 2e-06 Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 11/94 (11%) Frame = +3
Query: 804 RKFLIRDIFVPYIGILFNAIFESQLLESG--VITVFQILFEAISAFGNVGLSISIT---- 965 R+ L D++ ++G+ I E L+ VF +LFE +SA+G VGLS T Sbjct: 653 RRQLSFDLWYVFLGLFIITIAEGSKLQQNDNAFQVFNVLFEVVSAYGTVGLSFGYTNANT 712
Query: 966 -----LSTYSKLVFIALMLAGKHRQLPESVDESV 1052 + SKLV IA+ + G+HR LP ++D +V Sbjct: 713 SFSGQFNVISKLVIIAMQVRGRHRGLPYALDRAV 746
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3236559 Number of Hits to DB: 1,687,151,922 Number of extensions: 32963254 Number of successful extensions: 65515 Number of sequences better than 10.0: 237 Number of HSP's gapped: 65443 Number of HSP's successfully gapped: 305 Length of query: 380 Length of database: 1,051,180,864 Length adjustment: 130 Effective length of query: 250 Effective length of database: 630,428,194 Effective search space: 157607048500 Effective search space used: 157607048500 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 32 (16.9 bits)
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