Contig-U13391-1
Contig ID Contig-U13391-1
Contig update 2002.12.18
Contig sequence
>Contig-U13391-1 (Contig-U13391-1Q) /CSM_Contig/Contig-U13391-1Q.Seq.d
CAATAAGTAATAATGATTTCTATGAAAAAGCTGTTGATATAGCAGAATCC
CTTCAATATAATAAATCCATTACAAGTTTTAATCTCTCTCATACAAAATG
TTCAAATCTTATTGGTCGTGTATTGGCAAAATCATTATGCATAAATCATA
CCCTAAAGAAATTAATATTATCTCATACAAAAATGTCATGTGCTGGTATT
GTTGAGTTTGCTCAAGGTTTAAAAGAAAATAAAATTCAATTGGAAAGTTT
AAATTTAGATGATACTGATTTACAAGATAAAGGTGCCACTGAAATTGGTG
AAGCAATTCGTTCAAATACTCATTTAACTCATTTATATTTAAATTCAAAT
TCAATTCTATCAAGTGGTGCCAAATCAATTGGTAAAGCT

Gap no gap
Contig length 389
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 2461479
End point 2461868
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U13391
List of clone(s)

est1=SSC102F,1,390
Translated Amino Acid sequence
ISNNDFYEKAVDIAESLQYNKSITSFNLSHTKCSNLIGRVLAKSLCINHTLKKLILSHTK
MSCAGIVEFAQGLKENKIQLESLNLDDTDLQDKGATEIGEAIRSNTHLTHLYLNSNSILS
SGAKSIGKA


Translated Amino Acid sequence (All Frames)
Frame A:
q*vimismkklli*qnpfniinplqvlisliqnvqillvvywqnhya*iip*rn*yyliq
kchvlvllsllkv*kkikfnwkv*i*miliykikvplklvkqfvqili*liyi*iqiqfy
qvvpnqlvk


Frame B:
nk***fl*ksc*ysripsi**ihykf*slsykmfksywscigkiimhksypkeiniisyk
nvmcwyc*vcsrfkrk*nsigkfkfr*y*ftr*rch*nw*snsfkysfnsfifkfkfnsi
kwcqinw*s


Frame C:
ISNNDFYEKAVDIAESLQYNKSITSFNLSHTKCSNLIGRVLAKSLCINHTLKKLILSHTK
MSCAGIVEFAQGLKENKIQLESLNLDDTDLQDKGATEIGEAIRSNTHLTHLYLNSNSILS
SGAKSIGKA


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U13391-1 (Contig-U13391-1Q)
/CSM_Contig/Contig-U13391-1Q.Seq.d
(389 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U13391-1 (Contig-U13391-1Q) /CSM_Contig/Conti... 771 0.0
Contig-U14297-1 (Contig-U14297-1Q) /CSM_Contig/Conti... 40 0.002
Contig-U13737-1 (Contig-U13737-1Q) /CSM_Contig/Conti... 38 0.007
Contig-U10981-1 (Contig-U10981-1Q) /CSM_Contig/Conti... 38 0.007
Contig-U06163-1 (Contig-U06163-1Q) /CSM_Contig/Conti... 38 0.007
Contig-U14676-1 (Contig-U14676-1Q) /CSM_Contig/Conti... 36 0.027
Contig-U13781-1 (Contig-U13781-1Q) /CSM_Contig/Conti... 36 0.027
Contig-U12606-1 (Contig-U12606-1Q) /CSM_Contig/Conti... 36 0.027
Contig-U10057-1 (Contig-U10057-1Q) /CSM_Contig/Conti... 36 0.027
Contig-U09259-1 (Contig-U09259-1Q) /CSM_Contig/Conti... 36 0.027

>Contig-U13391-1 (Contig-U13391-1Q) /CSM_Contig/Contig-U13391-1Q.Seq.d
Length = 389

Score = 771 bits (389), Expect = 0.0
Identities = 389/389 (100%)
Strand = Plus / Plus


Query: 1 caataagtaataatgatttctatgaaaaagctgttgatatagcagaatcccttcaatata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caataagtaataatgatttctatgaaaaagctgttgatatagcagaatcccttcaatata 60


Query: 61 ataaatccattacaagttttaatctctctcatacaaaatgttcaaatcttattggtcgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ataaatccattacaagttttaatctctctcatacaaaatgttcaaatcttattggtcgtg 120


Query: 121 tattggcaaaatcattatgcataaatcataccctaaagaaattaatattatctcatacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tattggcaaaatcattatgcataaatcataccctaaagaaattaatattatctcatacaa 180


Query: 181 aaatgtcatgtgctggtattgttgagtttgctcaaggtttaaaagaaaataaaattcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaatgtcatgtgctggtattgttgagtttgctcaaggtttaaaagaaaataaaattcaat 240


Query: 241 tggaaagtttaaatttagatgatactgatttacaagataaaggtgccactgaaattggtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggaaagtttaaatttagatgatactgatttacaagataaaggtgccactgaaattggtg 300


Query: 301 aagcaattcgttcaaatactcatttaactcatttatatttaaattcaaattcaattctat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagcaattcgttcaaatactcatttaactcatttatatttaaattcaaattcaattctat 360


Query: 361 caagtggtgccaaatcaattggtaaagct 389
|||||||||||||||||||||||||||||
Sbjct: 361 caagtggtgccaaatcaattggtaaagct 389


>Contig-U14297-1 (Contig-U14297-1Q) /CSM_Contig/Contig-U14297-1Q.Seq.d
Length = 668

Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 55 aatataataaatccattaca 74
||||||||||||||||||||
Sbjct: 198 aatataataaatccattaca 217


>Contig-U13737-1 (Contig-U13737-1Q) /CSM_Contig/Contig-U13737-1Q.Seq.d
Length = 672

Score = 38.2 bits (19), Expect = 0.007
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 234 attcaattggaaagtttaa 252
|||||||||||||||||||
Sbjct: 231 attcaattggaaagtttaa 249


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8583
Number of Sequences: 6905
Number of extensions: 8583
Number of successful extensions: 1098
Number of sequences better than 10.0: 370
length of query: 389
length of database: 5,674,871
effective HSP length: 16
effective length of query: 373
effective length of database: 5,564,391
effective search space: 2075517843
effective search space used: 2075517843
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2008.12. 9
Homology vs DNA
Query= Contig-U13391-1 (Contig-U13391-1Q) /CSM_Contig/Contig-U13391-1Q.Seq.d
(389 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU071615) Dictyostelium discoideum slug cDNA, clone SSC102. 476 e-130 1
(AM456206) Vitis vinifera contig VV78X257399.13, whole genom... 42 0.002 2
(AM427475) Vitis vinifera contig VV78X163885.14, whole genom... 40 0.018 2
(AC188370) Glycine max clone gmp1-120k16, complete sequence. 50 0.058 1
(ER548246) 1093016198016 Global-Ocean-Sampling_GS-35-01-01-1... 50 0.058 1
(CW483911) fsbb001f245m13f0 Sorghum methylation filtered lib... 50 0.058 1
(DN295124) PL03019A1B08 cDNA from sexually mature hermaphodi... 50 0.058 1
(AP008971) Finegoldia magna ATCC 29328 DNA, complete genome. 40 0.096 11
(AC221343) Bos taurus clone CH240-404A5, WORKING DRAFT SEQUE... 38 0.13 2
(AC219952) Bos taurus clone CH240-317N9, WORKING DRAFT SEQUE... 38 0.14 2
(BV092599) RPAMMSEQ0004515 Roche Palo Alto Mus musculus STS ... 48 0.23 1
(AC120003) Mus musculus chromosome 8, clone RP24-148H22, com... 48 0.23 1
(AC160215) Atelerix albiventris clone LB4-204M24, WORKING DR... 48 0.23 1
(AC157852) Atelerix albiventris clone LB4-260B7, WORKING DRA... 48 0.23 1
(AC157851) Atelerix albiventris clone LB4-16J17, WORKING DRA... 48 0.23 1
(AG939001) Drosophila ananassae DNA, clone: DNB1-009L18.R.fa... 48 0.23 1
(DC215128) Plasmodium berghei strain ANKA cDNA clone:MG01732... 48 0.23 1
(AC170220) Bos taurus clone CH240-236L17, WORKING DRAFT SEQU... 38 0.30 4
(CP000721) Clostridium beijerinckii NCIMB 8052, complete gen... 38 0.34 15
(AM438175) Vitis vinifera, whole genome shotgun sequence, co... 42 0.37 3
(AL844507) Plasmodium falciparum chromosome 8. 34 0.40 10
(CT553222) A BAC library has been constructed from cultivar ... 34 0.81 2
(AC168683) Strongylocentrotus purpuratus clone R3-3014O11, W... 34 0.82 4
(AL591978) Listeria monocytogenes strain EGD, complete genom... 34 0.87 4
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 36 0.91 6
(BX908756) Zebrafish DNA sequence from clone CH211-190D13 in... 46 0.91 1
(AM461821) Vitis vinifera contig VV78X076849.15, whole genom... 46 0.91 1
(AM443489) Vitis vinifera contig VV78X100420.11, whole genom... 46 0.91 1
(AM427618) Vitis vinifera contig VV78X181764.13, whole genom... 46 0.91 1
(AM426766) Vitis vinifera contig VV78X004841.6, whole genome... 46 0.91 1
(EA266462) Sequence 683 from patent US 7241867. 46 0.91 1
(EA266166) Sequence 356 from patent US 7241867. 46 0.91 1
(DD419614) GENES OF AN OTITIS MEDIA ISOLATE OF NONTYPEABLE H... 46 0.91 1
(DD419318) GENES OF AN OTITIS MEDIA ISOLATE OF NONTYPEABLE H... 46 0.91 1
(CS219618) Sequence 1633 from Patent WO2005111066. 46 0.91 1
(CQ873070) Sequence 683 from Patent WO2004078949. 46 0.91 1
(CQ872743) Sequence 356 from Patent WO2004078949. 46 0.91 1
(BD426631) The Nucleotide Sequence of the Haemophilus influe... 46 0.91 1
(BD425770) The Nucleotide Sequence of the Haemophilus influe... 46 0.91 1
(AR632719) Sequence 1 from patent US 6846651. 46 0.91 1
(AR274513) Sequence 1 from patent US 6506581. 46 0.91 1
(AR139597) Sequence 16 from patent US 6207384. 46 0.91 1
(FH280176) CHO_OF4177xl12f1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 0.91 1
(ET969043) CHO_OF640xf24r1.ab1 CHO_OF Nicotiana tabacum geno... 46 0.91 1
(ER515126) 1093015498109 Global-Ocean-Sampling_GS-35-01-01-1... 46 0.91 1
(DU327579) 1098473610927 CHORI-243 Ovis aries genomic clone ... 46 0.91 1
(DU072894) 60612 Tomato HindIII BAC Library Solanum lycopers... 46 0.91 1
(CT519397) A BAC library has been constructed from cultivar ... 46 0.91 1
(FF637463) G825P587FA9.T0 Acorn worm normalized gastrula pEx... 46 0.91 1
(FF634024) G825P563FB7.T0 Acorn worm normalized gastrula pEx... 46 0.91 1
(FF626515) G825P5321FG9.T0 Acorn worm normalized gastrula pE... 46 0.91 1
(FF620566) G825P5237FF10.T0 Acorn worm normalized gastrula p... 46 0.91 1
(FF615152) G825P5184FG3.T0 Acorn worm normalized gastrula pE... 46 0.91 1
(L42023) Haemophilus influenzae Rd KW20, complete genome. 46 0.91 1
(CP000672) Haemophilus influenzae PittGG, complete genome. 46 0.91 1
(CP000671) Haemophilus influenzae PittEE, complete genome. 46 0.91 1
(CP000057) Haemophilus influenzae 86-028NP, complete genome. 46 0.91 1
(BX511089) Zebrafish DNA sequence from clone DKEY-258P11 in ... 38 0.97 3
(EJ508572) 1095407031867 Global-Ocean-Sampling_GS-28-01-01-1... 40 1.0 2
(ER418890) 1092963689437 Global-Ocean-Sampling_GS-35-01-01-1... 36 1.1 3
(CR450742) Zebrafish DNA sequence from clone CH211-232A5 in ... 40 1.1 4
(ET697498) CHO_OF389xp09r1.ab1 CHO_OF Nicotiana tabacum geno... 38 1.2 2
(AC130249) Rattus norvegicus clone CH230-226C23, *** SEQUENC... 42 1.2 2
(CR385068) Zebrafish DNA sequence from clone CH211-245H7 in ... 40 1.2 4
(BX664749) Zebrafish DNA sequence from clone DKEY-53M7 in li... 42 1.3 4
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 30 1.4 9
(AM481556) Vitis vinifera contig VV78X019239.11, whole genom... 40 1.4 3
(AC022024) Homo sapiens chromosome 10 clone RP11-432B10, com... 36 1.6 5
(AX641668) Sequence 2858 from Patent WO0101118. 34 1.7 5
(AM453119) Vitis vinifera contig VV78X136888.4, whole genome... 42 1.8 2
(AM484402) Vitis vinifera contig VV78X171170.4, whole genome... 40 1.8 2
(AC223899) Bos taurus clone CH240-455E17, WORKING DRAFT SEQU... 38 1.8 3
(AC141787) Apis mellifera clone CH224-59E7, WORKING DRAFT SE... 32 1.8 2
(AC126051) Mus musculus chromosome UNK clone RP23-259K18, WO... 40 2.0 4
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 34 2.0 12
(AM444201) Vitis vinifera contig VV78X075740.4, whole genome... 36 2.3 3
(AQ445850) nbxb0056P15r CUGI Rice BAC Library Oryza sativa J... 34 2.5 2
(AC155009) Bos taurus clone CH240-35H20, WORKING DRAFT SEQUE... 40 2.5 6
(AC156015) Mus musculus BAC clone RP24-345H1 from chromosome... 42 2.8 4
(BX548174) Prochlorococcus marinus MED4 complete genome. 38 2.9 11
(ED105425) AUAC-aat40c04.g1 Ascaris suum whole genome shotgu... 34 3.1 3
(EA692788) Sequence 71667 from patent US 7365185. 44 3.4 2
(DX437203) BE1084_F02_R IASMA L1 HindIII BAC library Vitis v... 40 3.4 2
(ER624381) 1093017544209 Global-Ocean-Sampling_GS-36-01-01-2... 34 3.4 3
(BX511188) Zebrafish DNA sequence from clone DKEY-184A17 in ... 44 3.6 1
(BX470195) Mouse DNA sequence from clone RP23-4K22 on chromo... 44 3.6 1
(AC191883) Rhesus Macaque BAC CH250-265I3 () complete seque... 44 3.6 1
(CU012043) M.truncatula DNA sequence from clone MTH2-63O12 o... 44 3.6 1
(AP008213) Oryza sativa (japonica cultivar-group) genomic DN... 44 3.6 1
(AP008212) Oryza sativa (japonica cultivar-group) genomic DN... 44 3.6 1
(AP008210) Oryza sativa (japonica cultivar-group) genomic DN... 44 3.6 1
(AP005774) Oryza sativa Japonica Group genomic DNA, chromoso... 44 3.6 1
(AP004733) Oryza sativa Japonica Group genomic DNA, chromoso... 44 3.6 1
(AP003541) Oryza sativa Japonica Group genomic DNA, chromoso... 44 3.6 1
(AM482625) Vitis vinifera contig VV78X106304.5, whole genome... 44 3.6 1
(AM447405) Vitis vinifera contig VV78X150543.5, whole genome... 44 3.6 1
(AM438808) Vitis vinifera contig VV78X149025.6, whole genome... 44 3.6 1
(AL731630) Oryza sativa genomic DNA, chromosome 4, BAC clone... 44 3.6 1
(AL606659) Oryza sativa genomic DNA, chromosome 4, BAC clone... 44 3.6 1
(AC216688) Populus trichocarpa clone POP098-A10, complete se... 44 3.6 1

>(AU071615) Dictyostelium discoideum slug cDNA, clone SSC102.
Length = 240

Score = 476 bits (240), Expect = e-130
Identities = 240/240 (100%)
Strand = Plus / Plus


Query: 1 caataagtaataatgatttctatgaaaaagctgttgatatagcagaatcccttcaatata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caataagtaataatgatttctatgaaaaagctgttgatatagcagaatcccttcaatata 60


Query: 61 ataaatccattacaagttttaatctctctcatacaaaatgttcaaatcttattggtcgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ataaatccattacaagttttaatctctctcatacaaaatgttcaaatcttattggtcgtg 120


Query: 121 tattggcaaaatcattatgcataaatcataccctaaagaaattaatattatctcatacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tattggcaaaatcattatgcataaatcataccctaaagaaattaatattatctcatacaa 180


Query: 181 aaatgtcatgtgctggtattgttgagtttgctcaaggtttaaaagaaaataaaattcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaatgtcatgtgctggtattgttgagtttgctcaaggtttaaaagaaaataaaattcaat 240

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 551,652,490
Number of extensions: 36172884
Number of successful extensions: 3412840
Number of sequences better than 10.0: 211
Length of query: 389
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 366
Effective length of database: 93,106,754,628
Effective search space: 34077072193848
Effective search space used: 34077072193848
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)

protein update 2009. 7. 7
Homology vs Protein
Query= Contig-U13391-1 (Contig-U13391-1Q) /CSM_Contig/Contig-U13391-1Q.Seq.d
(389 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

BX908798_1341(BX908798|pid:none) Parachlamydia-related symbiont ... 71 1e-11
BX908798_1455(BX908798|pid:none) Parachlamydia-related symbiont ... 69 4e-11
CP000080_288(CP000080|pid:none) Leishmania major strain Friedlin... 67 1e-10
BX908798_264(BX908798|pid:none) Parachlamydia-related symbiont U... 65 6e-10
AM502247_310(AM502247|pid:none) Leishmania infantum chromosome 29. 65 1e-09
BC166378_1(BC166378|pid:none) Xenopus tropicalis hypothetical pr... 65 1e-09
(Q6ZQY2) RecName: Full=Leucine-rich repeat-containing protein LO... 64 2e-09
(Q14BP6) RecName: Full=Leucine-rich repeat-containing protein LO... 63 3e-09
FJ004846_1(FJ004846|pid:none) Ictalurus punctatus NLRC3 receptor... 62 5e-09
AY266455_1(AY266455|pid:none) Synthetic construct leucine-rich r... 60 2e-08
AF501291_1(AF501291|pid:none) Homo sapiens CARD15-like protein m... 60 2e-08
AY266456_1(AY266456|pid:none) Synthetic construct leucine-rich r... 57 2e-07
AY266453_1(AY266453|pid:none) Synthetic construct leucine-rich r... 57 2e-07
EU348832_1(EU348832|pid:none) Sus scrofa nucleotide-binding olig... 57 3e-07
AF501292_1(AF501292|pid:none) Homo sapiens CARD15-like protein m... 55 6e-07
(Q5DU56) RecName: Full=Protein NLRC3; 54 1e-06
AK079766_1(AK079766|pid:none) Mus musculus 0 day neonate thymus ... 54 1e-06
BC160196_1(BC160196|pid:none) Synthetic construct Mus musculus c... 54 1e-06
EU643474_20(EU643474|pid:none) Adineta vaga clone Av240_B G-prot... 54 2e-06
AC104642_21(AC104642|pid:none) Trypanosoma brucei chromosome 3 c... 54 2e-06
CP000087_895(CP000087|pid:none) Rickettsia bellii RML369-C, comp... 53 3e-06
A45841(A45841) T-complex-associated-testes-expressed-1 protein -... 52 5e-06
(A6H639) RecName: Full=T-complex-associated testis-expressed pro... 52 5e-06
EU643483_23(EU643483|pid:none) Adineta vaga clone Av180_A AIG1-l... 52 5e-06
EU432548_11(EU432548|pid:none) Philodina roseola guanylyl cyclas... 52 8e-06
AY056236_1(AY056236|pid:none) Arabidopsis thaliana unknown prote... 52 8e-06
CP000684_3(CP000684|pid:none) Rickettsia massiliae MTU5 plasmid ... 51 1e-05
CR954203_353(CR954203|pid:none) Ostreococcus tauri strain OTTH05... 51 1e-05
BC070501_1(BC070501|pid:none) Rattus norvegicus ribonuclease/ang... 50 2e-05
S20597(S20597) ribonuclease inhibitor - rat &X62528_1(X62528|pi... 50 2e-05
CR954203_68(CR954203|pid:none) Ostreococcus tauri strain OTTH059... 50 2e-05
(P29315) RecName: Full=Ribonuclease inhibitor; AltName: Full=Rib... 50 2e-05
AC116986_64(AC116986|pid:none) Dictyostelium discoideum chromoso... 49 4e-05
AL929041_1(AL929041|pid:none) Zebrafish DNA sequence from clone ... 49 6e-05
AC007067_12(AC007067|pid:none) Genomic sequence for Arabidopsis ... 49 7e-05
(Q53B88) RecName: Full=Nucleotide-binding oligomerization domain... 48 9e-05
DQ060248_1(DQ060248|pid:none) Danio rerio CARD15 mRNA, partial c... 48 1e-04
(Q91VI7) RecName: Full=Ribonuclease inhibitor; AltName: Full=Rib... 47 2e-04
AF071546_1(AF071546|pid:none) Mus musculus ribonuclease/angiogen... 47 2e-04
AM502230_65(AM502230|pid:none) Leishmania infantum chromosome 12. 47 2e-04
(Q4R642) RecName: Full=T-complex-associated testis-expressed pro... 47 3e-04
BC124387_1(BC124387|pid:none) Danio rerio si:ch211-234g24.1, mRN... 47 3e-04
AM494972_448(AM494972|pid:none) Leishmania braziliensis chromoso... 47 3e-04
EF396237_1(EF396237|pid:none) Nicotiana benthamiana RAN GTPase-a... 47 3e-04
BC141792_1(BC141792|pid:none) Danio rerio si:ch211-234g24.1, mRN... 47 3e-04
CU914168_1488(CU914168|pid:none) Ralstonia solanacearum strain I... 46 4e-04
AY154460_1(AY154460|pid:none) Homo sapiens NALP5 (NALP5) mRNA, c... 46 4e-04
(P59047) RecName: Full=NACHT, LRR and PYD domains-containing pro... 46 4e-04
CP000849_1055(CP000849|pid:none) Rickettsia bellii OSU 85-389, c... 46 4e-04
AM423109_1(AM423109|pid:none) Nicotiana benthamiana partial mRNA... 46 4e-04
(A0JPI9) RecName: Full=Uncharacterized protein C14orf166B homolo... 46 5e-04
FJ004845_1(FJ004845|pid:none) Ictalurus punctatus NOD2 receptor ... 45 6e-04
AM411448_1(AM411448|pid:none) Solanum tuberosum subsp. tuberosum... 45 6e-04
(Q5JU00) RecName: Full=T-complex-associated testis-expressed pro... 45 8e-04
CT005251_71(CT005251|pid:none) Leishmania major strain Friedlin,... 45 8e-04
(Q1ZXD6) RecName: Full=Probable serine/threonine-protein kinase ... 45 8e-04
BC147936_1(BC147936|pid:none) Bos taurus NLR family, pyrin domai... 45 0.001
EU340329_1(EU340329|pid:none) Macaca mulatta NLR family pyrin do... 45 0.001
AM502246_206(AM502246|pid:none) Leishmania infantum chromosome 28. 45 0.001
AF028243_1(AF028243|pid:none) Strongylocentrotus purpuratus GTPa... 45 0.001
AL646053_915(AL646053|pid:none) Ralstonia solanacearum GMI1000 m... 44 0.001
(Q8TEU9) RecName: Full=NACHT, LRR and PYD domains-containing pro... 44 0.002
AY154463_1(AY154463|pid:none) Homo sapiens NALP8 (NALP8) mRNA, c... 44 0.002
AY329487_1(AY329487|pid:none) Mus musculus strain CBA/J MATER pr... 44 0.002
AM453162_2(AM453162|pid:none) Vitis vinifera contig VV78X048857.... 44 0.002
AF468522_1(AF468522|pid:none) Homo sapiens NALP3 long isoform (N... 44 0.002
AY329484_1(AY329484|pid:none) Mus musculus strain SWR/J MATER pr... 44 0.002
BC053384_1(BC053384|pid:none) Mus musculus NLR family, pyrin dom... 44 0.002
AL606804_3(AL606804|pid:none) Human DNA sequence from clone RP11... 44 0.002
AY329490_1(AY329490|pid:none) Mus musculus strain A/J MATER prot... 44 0.002
(Q6VSG4) RecName: Full=NACHT, LRR and PYD domains-containing pro... 44 0.002
AK314998_1(AK314998|pid:none) Homo sapiens cDNA, FLJ95925, highl... 44 0.002
AY196362_1(AY196362|pid:none) Mus musculus strain CBA/J MATER pr... 44 0.002
(Q8BKR5) RecName: Full=Leucine-rich repeat-containing protein 68... 43 0.003
BT054229_1(BT054229|pid:none) Zea mays full-length cDNA clone ZM... 43 0.003
EU960259_1(EU960259|pid:none) Zea mays clone 222959 ran GTPase a... 43 0.003
BC163735_1(BC163735|pid:none) Danio rerio zgc:194906, mRNA (cDNA... 43 0.004
AL606804_2(AL606804|pid:none) Human DNA sequence from clone RP11... 43 0.004
CP000587_82(CP000587|pid:none) Ostreococcus lucimarinus CCE9901 ... 43 0.004
AY092033_1(AY092033|pid:none) Homo sapiens NALP3 intermediate is... 43 0.004
AM502254_692(AM502254|pid:none) Leishmania infantum chromosome 36. 42 0.005
DQ060247_1(DQ060247|pid:none) Takifugu rubripes CARD15 mRNA, com... 42 0.005
AY594149_1(AY594149|pid:none) Saguinus oedipus caspase activatio... 42 0.007
AX417214_1(AX417214|pid:none) Sequence 23 from Patent WO0226780. 42 0.007
CT005272_438(CT005272|pid:none) Leishmania major strain Friedlin... 42 0.007
EU344966_1(EU344966|pid:none) Macaca mulatta NLR family pyrin do... 42 0.007
(P59046) RecName: Full=NACHT, LRR and PYD domains-containing pro... 42 0.007
AY116204_1(AY116204|pid:none) Homo sapiens monarch-1 mRNA, compl... 42 0.007
EU340330_1(EU340330|pid:none) Macaca mulatta NLR family pyrin do... 42 0.009
AJ303140_1(AJ303140|pid:none) Homo sapiens NOD2 gene for LRR-con... 42 0.009
(Q53B87) RecName: Full=Nucleotide-binding oligomerization domain... 42 0.009
(Q9HC29) RecName: Full=Nucleotide-binding oligomerization domain... 42 0.009
BX927313_1(BX927313|pid:none) Zebrafish DNA sequence from clone ... 42 0.009
AK298099_1(AK298099|pid:none) Homo sapiens cDNA FLJ59824 complet... 42 0.009
AK084463_1(AK084463|pid:none) Mus musculus 13 days embryo heart ... 41 0.011
AF298548_1(AF298548|pid:none) Homo sapiens caspase recruitment d... 41 0.011
AF111169_4(AF111169|pid:none) Homo sapiens chromosome 14 BAC con... 41 0.011
CP000087_616(CP000087|pid:none) Rickettsia bellii RML369-C, comp... 41 0.011
CP001160_398(CP001160|pid:none) Thalassiosira pseudonana CCMP133... 41 0.011
FN359286_9(FN359286|pid:none) Schistosoma mansoni genome sequenc... 41 0.011
CR954207_82(CR954207|pid:none) Ostreococcus tauri strain OTTH059... 41 0.011
AK147017_1(AK147017|pid:none) Mus musculus 16 days embryo kidney... 41 0.011
AF177170_1(AF177170|pid:none) Mus musculus tropomodulin 2 (Tmod2... 41 0.015
(Q9JKK7) RecName: Full=Tropomodulin-2; AltName: Full=Neuronal tr... 41 0.015
BC102768_1(BC102768|pid:none) Bos taurus ribonuclease/angiogenin... 41 0.015
AF237629_1(AF237629|pid:none) Mus musculus neural tropomodulin N... 41 0.015
AF052427_4(AF052427|pid:none) Trypanosoma cruzi cosmid 2i15 NPK-... 41 0.015
BC154719_1(BC154719|pid:none) Xenopus tropicalis hypothetical pr... 41 0.015
AY116206_1(AY116206|pid:none) Homo sapiens monarch-1 splice form... 40 0.020
AK095460_1(AK095460|pid:none) Homo sapiens cDNA FLJ38141 fis, cl... 40 0.020
AY116207_1(AY116207|pid:none) Homo sapiens monarch-1 splice form... 40 0.020
(O13066) RecName: Full=Ran GTPase-activating protein 1; ... 40 0.020
AY116205_1(AY116205|pid:none) Homo sapiens monarch-1 splice form... 40 0.020
AC005757_1(AC005757|pid:none) Homo sapiens chromosome 19, cosmid... 40 0.020
(O75864) RecName: Full=Leucine-rich repeat-containing protein 68; 40 0.020
BC051787_1(BC051787|pid:none) Homo sapiens NLR family, pyrin dom... 40 0.026
AB023143_1(AB023143|pid:none) Homo sapiens mRNA for KIAA0926 pro... 40 0.026
AF229061_1(AF229061|pid:none) Homo sapiens NAC-gamma splice vari... 40 0.026
AX089765_1(AX089765|pid:none) Sequence 5 from Patent WO0116170. 40 0.026
AB385404_1(AB385404|pid:none) Synthetic construct DNA, clone: pF... 40 0.026
AX089769_1(AX089769|pid:none) Sequence 9 from Patent WO0116170. 40 0.026
AX089771_1(AX089771|pid:none) Sequence 11 from Patent WO0116170. 40 0.026
(Q9C000) RecName: Full=NACHT, LRR and PYD domains-containing pro... 40 0.026
AF229062_1(AF229062|pid:none) Homo sapiens NAC-delta splice vari... 40 0.026
AM438596_2(AM438596|pid:none) Vitis vinifera contig VV78X049162.... 40 0.033
BC134854_1(BC134854|pid:none) Danio rerio si:ch211-81a5.5, mRNA ... 40 0.033
AJ720502_1(AJ720502|pid:none) Gallus gallus mRNA for hypothetica... 40 0.033
FJ687851_1(FJ687851|pid:none) Drosophila melanogaster strain GN0... 40 0.033
FJ687798_1(FJ687798|pid:none) Drosophila melanogaster strain m63... 40 0.033
AF143860_1(AF143860|pid:none) Drosophila melanogaster RanGAP (Sd... 40 0.033
DQ407912_1(DQ407912|pid:none) Ictalurus punctatus clone SCCH11 r... 40 0.033
CP000849_1020(CP000849|pid:none) Rickettsia bellii OSU 85-389, c... 39 0.044
BC043982_1(BC043982|pid:none) Xenopus laevis RAN GTPase activati... 39 0.044
CP000087_439(CP000087|pid:none) Rickettsia bellii RML369-C, comp... 39 0.044
(P10775) RecName: Full=Ribonuclease inhibitor; AltName: Full=Rib... 39 0.044
BC054654_1(BC054654|pid:none) Danio rerio Ran GTPase activating ... 39 0.044
BC047163_1(BC047163|pid:none) Xenopus laevis tropomodulin 3, mRN... 39 0.044
M36717_1(M36717|pid:none) Human ribonuclease/angiogenin inhibito... 39 0.044
M58700_1(M58700|pid:none) Pig ribonuclease inhibitor (RI) mRNA, ... 39 0.044
(P13489) RecName: Full=Ribonuclease inhibitor; AltName: Full=Rib... 39 0.044
BC134204_1(BC134204|pid:none) Danio rerio similar to LOC496076 p... 39 0.044
BC126016_1(BC126016|pid:none) Xenopus laevis cDNA clone MGC:1547... 39 0.044
AE014134_1176(AE014134|pid:none) Drosophila melanogaster chromos... 39 0.057
CP001324_560(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 39 0.057
AE014134_1175(AE014134|pid:none) Drosophila melanogaster chromos... 39 0.057
AB384760_1(AB384760|pid:none) Synthetic construct DNA, clone: pF... 39 0.057
(Q9LE82) RecName: Full=RAN GTPase-activating protein 1; ... 39 0.074
AY364009_1(AY364009|pid:none) Mus musculus NALP9A mRNA, complete... 39 0.074
(Q647I9) RecName: Full=NACHT, LRR and PYD domains-containing pro... 38 0.097
(Q86W25) RecName: Full=NACHT, LRR and PYD domains-containing pro... 38 0.097
CR954204_218(CR954204|pid:none) Ostreococcus tauri strain OTTH05... 38 0.097
AC098833_9(AC098833|pid:none) Oryza sativa (japonica cultivar-gr... 38 0.13
CP000117_1490(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 38 0.13
(Q8CIM1) RecName: Full=Leucine-rich repeat-containing protein 45... 38 0.13
AF214560_1(AF214560|pid:none) Arabidopsis thaliana RAN GTPase ac... 38 0.13
AK125722_1(AK125722|pid:none) Homo sapiens cDNA FLJ43734 fis, cl... 38 0.13
AF231021_1(AF231021|pid:none) Homo sapiens leucine-rich-repeat p... 38 0.13
AF111710_4(AF111710|pid:none) Oryza sativa subsp. indica putativ... 38 0.13
Z75539_5(Z75539|pid:none) Caenorhabditis elegans Cosmid F28C1, c... 37 0.17
AB178009_1(AB178009|pid:none) Ralstonia solanacearum lrpA, lrpB ... 37 0.17
CT005244_15(CT005244|pid:none) Leishmania major strain Friedlin,... 37 0.17
BX927329_2(BX927329|pid:none) Zebrafish DNA sequence from clone ... 37 0.17
AE017342_11(AE017342|pid:none) Cryptococcus neoformans var. neof... 37 0.17
C89243(C89243) protein F28C1.3 [imported] - Caenorhabditis elega... 37 0.17
CU694407_5(CU694407|pid:none) Ralstonia solanacearum strain MolK... 37 0.17
CP000025_1567(CP000025|pid:none) Campylobacter jejuni RM1221, co... 37 0.28
AC092556_19(AC092556|pid:none) Oryza sativa chromosome 3 BAC OSJ... 37 0.28
AB178024_1(AB178024|pid:none) Ralstonia solanacearum lrpG gene f... 37 0.28
CU695238_398(CU695238|pid:none) Ralstonia solanacearum strain Mo... 37 0.28
CU914168_1295(CU914168|pid:none) Ralstonia solanacearum strain I... 37 0.28
AY596199_1(AY596199|pid:none) Mus musculus NALP-iota (Nalp-iota)... 36 0.37
AM494967_16(AM494967|pid:none) Leishmania braziliensis chromosom... 36 0.37
AM910995_453(AM910995|pid:none) Plasmodium knowlesi strain H chr... 36 0.37
AB016874_3(AB016874|pid:none) Arabidopsis thaliana genomic DNA, ... 36 0.37
AK314533_1(AK314533|pid:none) Homo sapiens cDNA, FLJ95355, highl... 36 0.37
DQ151357_1(DQ151357|pid:none) Petromyzon marinus clone T.E6 vari... 36 0.48
(Q9M651) RecName: Full=RAN GTPase-activating protein 2; ... 36 0.48
AK136247_1(AK136247|pid:none) Mus musculus in vitro fertilized e... 36 0.48
(Q8N4P6) RecName: Full=Leucine-rich repeat-containing protein C1... 36 0.48
BC153283_1(BC153283|pid:none) Bos taurus chromosome 1 open readi... 36 0.48
CP001037_1134(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 36 0.48
AY596195_1(AY596195|pid:none) Mus musculus NALP-beta (Nalp-beta)... 36 0.48
AK057446_1(AK057446|pid:none) Homo sapiens cDNA FLJ32884 fis, cl... 36 0.48
CP000962_1769(CP000962|pid:none) Clostridium botulinum A3 str. L... 35 0.63
AM494942_15(AM494942|pid:none) Leishmania braziliensis chromosom... 35 0.63
AB178025_1(AB178025|pid:none) Ralstonia solanacearum lrpH gene f... 35 0.63
AC114263_20(AC114263|pid:none) Dictyostelium discoideum chromoso... 35 0.63
AL035681_7(AL035681|pid:none) Human DNA sequence from clone RP4-... 35 0.63
CP000728_1668(CP000728|pid:none) Clostridium botulinum F str. La... 35 0.63
AM412317_1767(AM412317|pid:none) Clostridium botulinum A str. AT... 35 0.63
FN392322_748(FN392322|pid:none) Pichia pastoris GS115 chromosome... 35 0.63
AM502250_373(AM502250|pid:none) Leishmania infantum chromosome 32. 35 0.63
(Q96CN5) RecName: Full=Leucine-rich repeat-containing protein 45... 35 0.63
AC091701_41(AC091701|pid:none) Trypanosoma brucei chromosome 8 c... 35 0.63
AK029938_1(AK029938|pid:none) Mus musculus adult male testis cDN... 35 0.63
AP002522_21(AP002522|pid:none) Oryza sativa Japonica Group genom... 35 0.63
AM485540_1(AM485540|pid:none) Vitis vinifera contig VV78X111537.... 35 0.63
EF613347_1(EF613347|pid:none) Danio rerio NOD-like receptor C mR... 35 0.82
AK088768_1(AK088768|pid:none) Mus musculus 2 days neonate thymus... 35 0.82
CP000939_1706(CP000939|pid:none) Clostridium botulinum B1 str. O... 35 0.82
CR860703_1(CR860703|pid:none) Pongo abelii mRNA; cDNA DKFZp459P1... 35 0.82
BC082056_1(BC082056|pid:none) Rattus norvegicus RAN GTPase activ... 35 0.82
AK095748_1(AK095748|pid:none) Homo sapiens cDNA FLJ38429 fis, cl... 35 0.82
(P28289) RecName: Full=Tropomodulin-1; AltName: Full=Erythrocyte... 35 0.82
CP000087_1029(CP000087|pid:none) Rickettsia bellii RML369-C, com... 35 0.82
(P46061) RecName: Full=Ran GTPase-activating protein 1; ... 35 0.82
AM494969_345(AM494969|pid:none) Leishmania braziliensis chromoso... 35 0.82
CP000849_411(CP000849|pid:none) Rickettsia bellii OSU 85-389, co... 35 0.82
AB072759_1(AB072759|pid:none) Macaca fascicularis testis cDNA cl... 35 1.1
AX663294_1(AX663294|pid:none) Sequence 1 from Patent WO02061086. 35 1.1
AX088208_1(AX088208|pid:none) Sequence 3 from Patent WO0114564. 35 1.1
CP001634_404(CP001634|pid:none) Kosmotoga olearia TBF 19.5.1, co... 35 1.1
AB052132_1(AB052132|pid:none) Gallus gallus E-Tmod mRNA for trop... 34 1.4
FJ009082_1(FJ009082|pid:none) Homo sapiens CARMIL1a (LRRC16A) mR... 34 1.4
BX927173_1(BX927173|pid:none) Zebrafish DNA sequence from clone ... 34 1.4
BC098927_1(BC098927|pid:none) Rattus norvegicus similar to chrom... 34 1.4
AY360472_1(AY360472|pid:none) Mus musculus NALP9c mRNA, complete... 34 1.4
CT009716_2(CT009716|pid:none) Zebrafish DNA sequence from clone ... 34 1.4
BC169296_1(BC169296|pid:none) Synthetic construct Homo sapiens c... 34 1.8
DQ631800_1(DQ631800|pid:none) Rattus norvegicus dual angiotensin... 34 1.8
BC081475_1(BC081475|pid:none) Danio rerio zgc:103424, mRNA (cDNA... 34 1.8
AK090431_1(AK090431|pid:none) Homo sapiens mRNA for FLJ00348 pro... 34 1.8
M85183_1(M85183|pid:none) Rattus norvegicus angiotensin/vasopres... 34 1.8
FJ004844_1(FJ004844|pid:none) Ictalurus punctatus NOD1 receptor ... 34 1.8
AM999887_227(AM999887|pid:none) Wolbachia endosymbiont of Culex ... 34 1.8
AD1822(AD1822) leucine-rich-repeat protein [imported] - Nostoc s... 34 1.8
CR861203_1(CR861203|pid:none) Pongo abelii mRNA; cDNA DKFZp459F0... 34 1.8
(P46060) RecName: Full=Ran GTPase-activating protein 1; ... 34 1.8
AB058738_1(AB058738|pid:none) Homo sapiens mRNA for KIAA1835 pro... 34 1.8
AM494963_52(AM494963|pid:none) Leishmania braziliensis chromosom... 33 2.4
CT005265_51(CT005265|pid:none) Leishmania major strain Friedlin,... 33 2.4
CT005269_332(CT005269|pid:none) Leishmania major strain Friedlin... 33 2.4
CP001083_1873(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 33 2.4
AC159408_54(AC159408|pid:none) Trypanosoma brucei chromosome 7 c... 33 2.4
AJ720646_1(AJ720646|pid:none) Gallus gallus mRNA for hypothetica... 33 2.4
AC116668_42(AC116668|pid:none) Trypanosoma brucei chromosome 5 c... 33 2.4
CP000087_408(CP000087|pid:none) Rickettsia bellii RML369-C, comp... 33 2.4
CR628336_1010(CR628336|pid:none) Legionella pneumophila str. Par... 33 2.4
AL845526_3(AL845526|pid:none) Zebrafish DNA sequence from clone ... 33 3.1
EU117219_1(EU117219|pid:none) Halocynthia roretzi tropomodulin m... 33 3.1
BC166169_1(BC166169|pid:none) Xenopus tropicalis hypothetical pr... 33 3.1
CR760007_1(CR760007|pid:none) Xenopus tropicalis finished cDNA, ... 33 3.1
BC161940_1(BC161940|pid:none) Rattus norvegicus similar to leuci... 33 3.1
AK043591_1(AK043591|pid:none) Mus musculus 10 days neonate corte... 33 3.1
AY355343_1(AY355343|pid:none) Mus musculus NALP6 mRNA, complete ... 33 3.1
AY437876_1(AY437876|pid:none) Mus musculus CARMIL mRNA, complete... 33 3.1
AB026654_9(AB026654|pid:none) Arabidopsis thaliana genomic DNA, ... 33 3.1
(Q6EDY6) RecName: Full=Leucine-rich repeat-containing protein 16... 33 3.1
CP000849_250(CP000849|pid:none) Rickettsia bellii OSU 85-389, co... 33 3.1
AJ579629_1(AJ579629|pid:none) Arabidopsis thaliana partial mRNA,... 33 3.1
(Q6Q4D0) RecName: Full=Protein BRUSHY 1; AltName: Full=Protein T... 33 3.1
CP000087_1186(CP000087|pid:none) Rickettsia bellii RML369-C, com... 33 3.1
BC013519_1(BC013519|pid:none) Mus musculus NLR family, pyrin dom... 33 3.1
AL513217_2(AL513217|pid:none) Human DNA sequence from clone RP11... 33 4.1
(P29536) RecName: Full=Leiomodin-1; AltName: Full=Leiomodin, mus... 33 4.1
BT059375_1(BT059375|pid:none) Salmo salar clone ssal-rgf-529-208... 33 4.1
AF246990_1(AF246990|pid:none) Chlamydomonas reinhardtii flagella... 33 4.1
AK303524_1(AK303524|pid:none) Homo sapiens cDNA FLJ61018 complet... 33 4.1
AK304700_1(AK304700|pid:none) Homo sapiens cDNA FLJ54257 complet... 33 4.1
CP000675_1037(CP000675|pid:none) Legionella pneumophila str. Cor... 33 4.1
AK295824_1(AK295824|pid:none) Homo sapiens cDNA FLJ55689 complet... 33 4.1
AM502244_50(AM502244|pid:none) Leishmania infantum chromosome 26. 33 4.1
AB071044_1(AB071044|pid:none) Macaca fascicularis testis cDNA cl... 33 4.1
AF321233_1(AF321233|pid:none) Mus musculus strain 129/SvJ chromo... 33 4.1
AY160388_1(AY160388|pid:none) Mus musculus SM/J NOD2 (Nod2) gene... 32 5.3
BC052862_1(BC052862|pid:none) Mus musculus RAN GTPase activating... 32 5.3
AY160258_1(AY160258|pid:none) Mus musculus domesticus WSB/Ei NOD... 32 5.3
T02764(T02764) myosin-I binding protein 125 - Acanthamoeba caste... 32 5.3
AK089843_1(AK089843|pid:none) Mus musculus activated spleen cDNA... 32 5.3
AY160238_1(AY160238|pid:none) Mus musculus musculus PWK/Ph NOD2 ... 32 5.3
AY160308_1(AY160308|pid:none) Mus musculus FL/1Re NOD2 (Nod2) ge... 32 5.3
BC044774_1(BC044774|pid:none) Mus musculus nucleotide-binding ol... 32 5.3
AY160288_1(AY160288|pid:none) Mus musculus SOD1/Ei NOD2 (Nod2) g... 32 5.3
CT005252_91(CT005252|pid:none) Leishmania major strain Friedlin,... 32 5.3
S18732(S18732;S26815)autoantigen, 64K - human 32 5.3
AM502239_8(AM502239|pid:none) Leishmania infantum chromosome 21. 32 5.3
AY160338_1(AY160338|pid:none) Mus musculus SWR/J NOD2 (Nod2) gen... 32 5.3
(Q8K3Z0) RecName: Full=Nucleotide-binding oligomerization domain... 32 5.3
CP001393_651(CP001393|pid:none) Anaerocellum thermophilum DSM 67... 32 5.3
FN357311_46(FN357311|pid:none) Schistosoma mansoni genome sequen... 32 5.3
CP001102_418(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 32 7.0
BT044817_1(BT044817|pid:none) Salmo salar clone ssal-rgf-504-229... 32 7.0
CP001615_2535(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 32 7.0
AY394934_1(AY394934|pid:none) Danio rerio clone RK044A2H10 hypot... 32 9.1
CP000361_516(CP000361|pid:none) Arcobacter butzleri RM4018, comp... 32 9.1
AL845526_4(AL845526|pid:none) Zebrafish DNA sequence from clone ... 32 9.1
EU344970_1(EU344970|pid:none) Macaca mulatta NLR family pyrin do... 32 9.1
CR628337_1020(CR628337|pid:none) Legionella pneumophila str. Len... 32 9.1
EU340327_1(EU340327|pid:none) Macaca mulatta NLR family pyrin do... 32 9.1

>BX908798_1341(BX908798|pid:none) Parachlamydia-related symbiont
UWE25, complete genome.
Length = 1764

Score = 71.2 bits (173), Expect = 1e-11
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
Frame = +3

Query: 3 ISNNDFYEKAVD-IAESLQYNKSITSFNLSHTKCSNLIGRVLAKSLCINHTLKKLILSHT 179
+ NN +K + IA++L N ++ + L + + S + L +SL N TLK + L+
Sbjct: 1421 LGNNQISDKGTEAIAQALASNTTLETLWLDNNQISFKGVKALVQSLAFNTTLKVIHLNSN 1480

Query: 180 KMSCAGIVEFAQGLKENKIQLESLNLDDTDLQDKGATEIGEAIRSNTHLTHLYLNSNSIL 359
K+S G AQ L N L+ L+L + + DKG EIG+A+ NT L LYL +N I
Sbjct: 1481 KISDEGAEAIAQALASNTT-LKILDLGNNQISDKGGKEIGKALAFNTVLRRLYLRNNQIS 1539

Query: 360 SSGAKSIGKA 389
GA++I +A
Sbjct: 1540 DEGAEAIAQA 1549

Score = 67.0 bits (162), Expect = 2e-10
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
Frame = +3

Query: 3 ISNNDFYEKAVD-IAESLQYNKSITSFNLSHTKCSNLIGRVLAKSLCINHTLKKLILSHT 179
+ NN K V + +SL N + + +L+ + SN LA++L N L+++ L+
Sbjct: 1561 LDNNQISFKGVKALVQSLASNTVLENLSLNGNQISNKGMEALAQALASNRKLREISLNGN 1620

Query: 180 KMSCAGIVEFAQGLKENKIQLESLNLDDTDLQDKGATEIGEAIRSNTHLTHLYLNSNSIL 359
++S G+ FA+ L N L+ L+L + DKGA + +A+ SNT L LYL N I
Sbjct: 1621 QISDEGMEAFARALTSNTA-LKVLHLGSNQISDKGAGALAQALASNTALRELYLGDNQIN 1679

Query: 360 SSGAKSIGKA 389
GA++I +A
Sbjct: 1680 DKGAETIAQA 1689

Score = 64.3 bits (155), Expect = 1e-09
Identities = 41/128 (32%), Positives = 70/128 (54%)
Frame = +3

Query: 6 SNNDFYEKAVDIAESLQYNKSITSFNLSHTKCSNLIGRVLAKSLCINHTLKKLILSHTKM 185
SN E A IA++L N ++ +L + + S+ G+ + K+L N L++L L + ++
Sbjct: 1479 SNKISDEGAEAIAQALASNTTLKILDLGNNQISDKGGKEIGKALAFNTVLRRLYLRNNQI 1538

Query: 186 SCAGIVEFAQGLKENKIQLESLNLDDTDLQDKGATEIGEAIRSNTHLTHLYLNSNSILSS 365
S G AQ L N LE+L LD+ + KG + +++ SNT L +L LN N I +
Sbjct: 1539 SDEGAEAIAQALASNTT-LETLWLDNNQISFKGVKALVQSLASNTVLENLSLNGNQISNK 1597

Query: 366 GAKSIGKA 389
G +++ +A
Sbjct: 1598 GMEALAQA 1605

Score = 62.8 bits (151), Expect = 4e-09
Identities = 40/119 (33%), Positives = 62/119 (52%)
Frame = +3

Query: 24 EKAVDIAESLQYNKSITSFNLSHTKCSNLIGRVLAKSLCINHTLKKLILSHTKMSCAGIV 203
++A IA +L N ++ S L + + S+ A++L N TLK L L + ++S G
Sbjct: 1345 KEAEIIANALALNTALRSLRLQNNQISDRGAEAFARALASNATLKALWLDNNQISNEGAE 1404

Query: 204 EFAQGLKENKIQLESLNLDDTDLQDKGATEIGEAIRSNTHLTHLYLNSNSILSSGAKSI 380
AQ L N L L L + + DKG I +A+ SNT L L+L++N I G K++
Sbjct: 1405 AIAQALASNTA-LRELYLGNNQISDKGTEAIAQALASNTTLETLWLDNNQISFKGVKAL 1462

Score = 62.4 bits (150), Expect = 5e-09
Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Frame = +3

Query: 3 ISNNDFYEKAVD-IAESLQYNKSITSFNLSHTKCSNLIGRVLAKSLCINHTLKKLILSHT 179
++ N K ++ +A++L N+ + +L+ + S+ A++L N LK L L
Sbjct: 1589 LNGNQISNKGMEALAQALASNRKLREISLNGNQISDEGMEAFARALTSNTALKVLHLGSN 1648

Query: 180 KMSCAGIVEFAQGLKENKIQLESLNLDDTDLQDKGATEIGEAIRSNTHLTHLYLNSNSIL 359
++S G AQ L N L L L D + DKGA I +A SNT L L L N I
Sbjct: 1649 QISDKGAGALAQALASNTA-LRELYLGDNQINDKGAETIAQAFASNTKLETLSLKGNQIS 1707

Query: 360 SSGAKSIGKA 389
GAK+I +A
Sbjct: 1708 DEGAKAIAQA 1717

Score = 58.5 bits (140), Expect = 7e-08
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
Frame = +3

Query: 3 ISNNDFYEKAVD-IAESLQYNKSITSFNLSHTKCSNLIGRVLAKSLCINHTLKKLILSHT 179
++ N ++ ++ A +L N ++ +L + S+ LA++L N L++L L
Sbjct: 1617 LNGNQISDEGMEAFARALTSNTALKVLHLGSNQISDKGAGALAQALASNTALRELYLGDN 1676

Query: 180 KMSCAGIVEFAQGLKENKIQLESLNLDDTDLQDKGATEIGEAIRSNTHLTHLYLNSNSIL 359
+++ G AQ N +LE+L+L + D+GA I +A SNT L L L N I
Sbjct: 1677 QINDKGAETIAQAFASNT-KLETLSLKGNQISDEGAKAIAQAFASNTKLETLSLRGNLIS 1735

Query: 360 SSGAKSIGKA 389
GAK+I +A
Sbjct: 1736 DEGAKAIAQA 1745

Score = 58.2 bits (139), Expect = 9e-08
Identities = 32/90 (35%), Positives = 53/90 (58%)
Frame = +3

Query: 120 VLAKSLCINHTLKKLILSHTKMSCAGIVEFAQGLKENKIQLESLNLDDTDLQDKGATEIG 299
++A +L +N L+ L L + ++S G FA+ L N L++L LD+ + ++GA I
Sbjct: 1349 IIANALALNTALRSLRLQNNQISDRGAEAFARALASNAT-LKALWLDNNQISNEGAEAIA 1407

Query: 300 EAIRSNTHLTHLYLNSNSILSSGAKSIGKA 389
+A+ SNT L LYL +N I G ++I +A
Sbjct: 1408 QALASNTALRELYLGNNQISDKGTEAIAQA 1437

Score = 48.9 bits (115), Expect = 6e-05
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Frame = +3

Query: 3 ISNNDFYEKAVD-IAESLQYNKSITSFNLSHTKCSNLIGRVLAKSLCINHTLKKLILSHT 179
+ +N +K +A++L N ++ L + ++ +A++ N L+ L L
Sbjct: 1645 LGSNQISDKGAGALAQALASNTALRELYLGDNQINDKGAETIAQAFASNTKLETLSLKGN 1704

Query: 180 KMSCAGIVEFAQGLKENKIQLESLNLDDTDLQDKGATEIGEAIRSNTHLTHLYLNSN 350
++S G AQ N +LE+L+L + D+GA I +A SNT+L +Y N+N
Sbjct: 1705 QISDEGAKAIAQAFASNT-KLETLSLRGNLISDEGAKAIAQAFASNTNLKTIYFNNN 1760

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 552,427,821
Number of extensions: 10324304
Number of successful extensions: 26091
Number of sequences better than 10.0: 289
Number of HSP's gapped: 25995
Number of HSP's successfully gapped: 497
Length of query: 129
Length of database: 1,051,180,864
Length adjustment: 94
Effective length of query: 35
Effective length of database: 746,944,318
Effective search space: 26143051130
Effective search space used: 26143051130
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 29 (15.8 bits)

PSORT

psg: 0.75 gvh: 0.44 alm: 0.43 top: 0.53 tms: 0.00 mit: 0.24 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.30 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

52.0 %: cytoplasmic
32.0 %: nuclear
8.0 %: cytoskeletal
8.0 %: mitochondrial

>> prediction for Contig-U13391-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0