Contig-U13346-1
Contig ID Contig-U13346-1
Contig update 2002.12.18
Contig sequence
>Contig-U13346-1 (Contig-U13346-1Q) /CSM_Contig/Contig-U13346-1Q.Seq.d
CCTACTGGAAATTAAAATATTTGTATTGCATTATTTATATAATAGAGAAA
ATAAACTACGTACGTTCAATGGATTCATGTAACCCAAATAACCCAGCAGT
AAAAAGAATCCTAAGGGAGATACAAGAACTTAGAAATGATACAAATCCAG
ATTACAAAGCATTTCCTTTAGAGGACAATATATTTGAGTGGCATTTTACA
ATAAGAGGACCACAAGATTCAGATTTTAATGGTGGTATTTACCATGGTAG
AATTATTTTACCATCTGAATATCCATTCAAACCACCAAATATTGTATTAT
TGACACCAAATGGTAGATTTGAAACCAATGTAAAGATTTGTTTAACTGTA
TCAGCACACCATCCAGAACATTGGCAACCATCTTGGAGTATTAGAACAGT
TTTAGTTGCATTAATTGGATTTATGCCAACAGAAGGAAAAGGTGCAATTG
GTGCTATTGATTTACCAACAAAAGATAGAAAGGAATTAGCATTAAAATCA
TTAGATTGGAAATGTACAAGATGTGGTTCACATAATCGTTTTGCTTTGGG
TCAACCAGTTAATAGTAATAATAATAATAATAATACAACCACCACTACAA
CAACAACTACAACAACAACAGCAGCAACAGAAACCACAGTTACAGCTATT
ACTAATACCTCAACAAATACTAATAATAATAATAATAATAATAATAATAA
TAATAATAATAATAATAATAATAATAATAGTGGTGATATTAAAAATGAAG
ATCAAGATTACAATGAAAAACTACAAGAGGAAGAAACTAAACAAAATACA
GAAACTTATTATGAAGAGGAAGAAATAGTCAATAACAACAATGAACAAGA
TAATGAAGATAATGAACCAATAGAAGATATGGTAATGAAATCACTTGATA
ATTTACCAACACAAAATATTTCAATTGGTGCTTCTGGTGGCAGTGGAGCA
TCAATACAATTAAATACACCAACAATTGGTGTTATCACTGAAAATAATAA
AAATAGTAACAACAACAACAACAACAACAACAACAACAGCAATAATAACA
ATAAAAATGACAATATAGCGCAAAATAATTCTCAAACACCCTCCGCCACA
CAAAAACCAACAACTACTTTACAAAACCCACAACAACCACCACAACTACA
ACAACAACCAATAATTCAACAACAAAGAACAATTTTAAACCCATCCACCA
TTCAAATTGATAGAATGATTGTAATTTTATTTACCCTTCTTGTGGCACTT
GCCATAAAGAGATTATTTTCCTAAGAAAAATAATAATAAAAATAAAAATA
AAAATTTTACATAAAATAGAGAAATATCCCCAATACATATGTGATCATTT
CAAAAGTATTTTCA

Gap no gap
Contig length 1364
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 4360724
End point 4359359
Strand (PLUS/MINUS) MINUS
Number of clones 17
Number of EST 27
Link to clone list U13346
List of clone(s)

est1=CFF551F,1,557
est2=CFJ341F,3,632
est3=CFC822F,4,606
est4=CFI411F,9,633
est5=AFO755E,13,1300
est6=AFF859F,14,636
est7=CFA272F,23,647
est8=SLH156F,41,565
est9=SFB293F,43,724
est10=SLG576F,47,375
est11=SLH830F,47,702
est12=VSD479E,565,1094
est13=VSD528F,567,958
est14=VSD528Z,567,940
est15=SLF791Z,601,914
est16=CFC822Z,602,1282
est17=CHN542Z,636,820
est18=SFB293Z,647,1317
est19=SFJ830Z,652,750
est20=CFI411Z,677,1365
est21=CFA272Z,680,1302
est22=CFF551Z,682,1294
est23=CFJ341Z,683,1280
est24=SSC309Z,712,921
est25=SLH830Z,787,1320
est26=SLH156Z,907,1324
est27=AFF859Z,944,1287
Translated Amino Acid sequence
YWKLKYLYCIIYIIEKINYVRSMDSCNPNNPAVKRILREIQELRNDTNPDYKAFPLEDNI
FEWHFTIRGPQDSDFNGGIYHGRIILPSEYPFKPPNIVLLTPNGRFETNVKICLTVSAHH
PEHWQPSWSIRTVLVALIGFMPTEGKGAIGAIDLPTKDRKELALKSLDWKCTRCGSHNRF
ALGQPVNSNNNNNNTTTTTTTTTTTTAATETTVTAITNTSTNTNNNNNNNNNNNNNNNNN
NNSGDIKNEDQDYNEKLQEEETKQNTETYYEEEEIVNNNNEQDNEDNEPIEDMVMKSLDN
LPTQNISIGASGGSGASIQLNTPTIGVITENNKNSNNNNNNNNNNSNNNNKNDNIAQNNS
QTPSATQKPTTTLQNPQQPPQLQQQPIIQQQRTILNPSTIQIDRMIVILFTLLVALAIKR
LFS*ek***k*k*kfyik*rnipntyviiskvfs


Translated Amino Acid sequence (All Frames)
Frame A:
ptgn*nicialfi**rk*ttyvqwihvtqitqq*kes*gryknlemiqiqitkhfl*rti
ylsgilq*edhkiqilmvvftmvelfyhlnihsnhqilyy*hqmvdlkpm*rfv*lyqht
iqnignhlgvleqf*lh*ldlcqqkekvqlvlliyqqkiern*h*nh*ignvqdvvhiiv
llwvnqliviiiiiiqpplqqqlqqqqqqqkpqlqlllipqqiliiiiiiiiiiiiiiii
iiivvilkmkikitmknykrkklnkiqklimkrkk*sittmnkimkimnq*kiw**nhli
iyqhkifqlvllvavehqyn*ihqqlvlslkiikivttttttttttaiitikmti*rkii
lkhppphknqqllykthnnhhnynnnq*fnnkeqf*thppfklie*l*fylpflwhlp*r
dyfpkknnnknknknft*nreispihm*sfqkyf


Frame B:
lleikifvlhylynrenklrtfngfm*pk*psskknpkgdtrt*k*yksrlqsisfrgqy
i*vafynkrttrfrf*wwylpw*nyfti*isiqttkyciidtkw*i*nqckdlfncistp
srtlatiley*nsfscinwiyanrrkrcnwcy*ftnkr*kgisikiirlemykmwft*sf
cfgsts********ynhhynnnynnnssnrnhsysyy*ylnky*****************
***w*y*k*rsrlq*kttrgrn*tkyrnll*rgrnsq*qq*tr**r**tnrrygneit**
ftntkyfnwcfwwqwsintikytnnwcyh*k**k**qqqqqqqqqqq**q*k*qysak*f
sntlrhtktnnyftkpttttttttttnnsttknnfkpihhsn**ndcnfiypscgtchke
iiflrkiiikikikilhkiekypqyicdhfksif


Frame C:
YWKLKYLYCIIYIIEKINYVRSMDSCNPNNPAVKRILREIQELRNDTNPDYKAFPLEDNI
FEWHFTIRGPQDSDFNGGIYHGRIILPSEYPFKPPNIVLLTPNGRFETNVKICLTVSAHH
PEHWQPSWSIRTVLVALIGFMPTEGKGAIGAIDLPTKDRKELALKSLDWKCTRCGSHNRF
ALGQPVNSNNNNNNTTTTTTTTTTTTAATETTVTAITNTSTNTNNNNNNNNNNNNNNNNN
NNSGDIKNEDQDYNEKLQEEETKQNTETYYEEEEIVNNNNEQDNEDNEPIEDMVMKSLDN
LPTQNISIGASGGSGASIQLNTPTIGVITENNKNSNNNNNNNNNNSNNNNKNDNIAQNNS
QTPSATQKPTTTLQNPQQPPQLQQQPIIQQQRTILNPSTIQIDRMIVILFTLLVALAIKR
LFS*ek***k*k*kfyik*rnipntyviiskvfs


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U13346-1 (Contig-U13346-1Q)
/CSM_Contig/Contig-U13346-1Q.Seq.d
(1364 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U13346-1 (Contig-U13346-1Q) /CSM_Contig/Conti... 1108 0.0
Contig-U05046-1 (Contig-U05046-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U14235-1 (Contig-U14235-1Q) /CSM_Contig/Conti... 38 0.024
Contig-U09270-1 (Contig-U09270-1Q) /CSM_Contig/Conti... 38 0.024
Contig-U03509-1 (Contig-U03509-1Q) /CSM_Contig/Conti... 38 0.024
Contig-U14670-1 (Contig-U14670-1Q) /CSM_Contig/Conti... 36 0.097
Contig-U12238-1 (Contig-U12238-1Q) /CSM_Contig/Conti... 36 0.097
Contig-U11806-1 (Contig-U11806-1Q) /CSM_Contig/Conti... 36 0.097
Contig-U11288-1 (Contig-U11288-1Q) /CSM_Contig/Conti... 36 0.097
Contig-U08738-1 (Contig-U08738-1Q) /CSM_Contig/Conti... 34 0.38

>Contig-U13346-1 (Contig-U13346-1Q) /CSM_Contig/Contig-U13346-1Q.Seq.d
Length = 1364

Score = 1108 bits (559), Expect = 0.0
Identities = 559/559 (100%)
Strand = Plus / Plus


Query: 1 cctactggaaattaaaatatttgtattgcattatttatataatagagaaaataaactacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctactggaaattaaaatatttgtattgcattatttatataatagagaaaataaactacg 60


Query: 61 tacgttcaatggattcatgtaacccaaataacccagcagtaaaaagaatcctaagggaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacgttcaatggattcatgtaacccaaataacccagcagtaaaaagaatcctaagggaga 120


Query: 121 tacaagaacttagaaatgatacaaatccagattacaaagcatttcctttagaggacaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tacaagaacttagaaatgatacaaatccagattacaaagcatttcctttagaggacaata 180


Query: 181 tatttgagtggcattttacaataagaggaccacaagattcagattttaatggtggtattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatttgagtggcattttacaataagaggaccacaagattcagattttaatggtggtattt 240


Query: 241 accatggtagaattattttaccatctgaatatccattcaaaccaccaaatattgtattat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 accatggtagaattattttaccatctgaatatccattcaaaccaccaaatattgtattat 300


Query: 301 tgacaccaaatggtagatttgaaaccaatgtaaagatttgtttaactgtatcagcacacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgacaccaaatggtagatttgaaaccaatgtaaagatttgtttaactgtatcagcacacc 360


Query: 361 atccagaacattggcaaccatcttggagtattagaacagttttagttgcattaattggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atccagaacattggcaaccatcttggagtattagaacagttttagttgcattaattggat 420


Query: 421 ttatgccaacagaaggaaaaggtgcaattggtgctattgatttaccaacaaaagatagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttatgccaacagaaggaaaaggtgcaattggtgctattgatttaccaacaaaagatagaa 480


Query: 481 aggaattagcattaaaatcattagattggaaatgtacaagatgtggttcacataatcgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aggaattagcattaaaatcattagattggaaatgtacaagatgtggttcacataatcgtt 540


Query: 541 ttgctttgggtcaaccagt 559
|||||||||||||||||||
Sbjct: 541 ttgctttgggtcaaccagt 559


Score = 551 bits (278), Expect = e-157
Identities = 278/278 (100%)
Strand = Plus / Plus


Query: 730 gtggtgatattaaaaatgaagatcaagattacaatgaaaaactacaagaggaagaaacta 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 gtggtgatattaaaaatgaagatcaagattacaatgaaaaactacaagaggaagaaacta 789


Query: 790 aacaaaatacagaaacttattatgaagaggaagaaatagtcaataacaacaatgaacaag 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 aacaaaatacagaaacttattatgaagaggaagaaatagtcaataacaacaatgaacaag 849


Query: 850 ataatgaagataatgaaccaatagaagatatggtaatgaaatcacttgataatttaccaa 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 ataatgaagataatgaaccaatagaagatatggtaatgaaatcacttgataatttaccaa 909


Query: 910 cacaaaatatttcaattggtgcttctggtggcagtggagcatcaatacaattaaatacac 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 cacaaaatatttcaattggtgcttctggtggcagtggagcatcaatacaattaaatacac 969


Query: 970 caacaattggtgttatcactgaaaataataaaaatagt 1007
||||||||||||||||||||||||||||||||||||||
Sbjct: 970 caacaattggtgttatcactgaaaataataaaaatagt 1007


Score = 184 bits (93), Expect = 2e-46
Identities = 93/93 (100%)
Strand = Plus / Plus


Query: 1183 ttttaaacccatccaccattcaaattgatagaatgattgtaattttatttacccttcttg 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1183 ttttaaacccatccaccattcaaattgatagaatgattgtaattttatttacccttcttg 1242


Query: 1243 tggcacttgccataaagagattattttcctaag 1275
|||||||||||||||||||||||||||||||||
Sbjct: 1243 tggcacttgccataaagagattattttcctaag 1275


Score = 125 bits (63), Expect = 1e-28
Identities = 63/63 (100%)
Strand = Plus / Plus


Query: 1039 gcaataataacaataaaaatgacaatatagcgcaaaataattctcaaacaccctccgcca 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 gcaataataacaataaaaatgacaatatagcgcaaaataattctcaaacaccctccgcca 1098


Query: 1099 cac 1101
|||
Sbjct: 1099 cac 1101


Score = 117 bits (59), Expect = 3e-26
Identities = 59/59 (100%)
Strand = Plus / Plus


Query: 1306 tttacataaaatagagaaatatccccaatacatatgtgatcatttcaaaagtattttca 1364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1306 tttacataaaatagagaaatatccccaatacatatgtgatcatttcaaaagtattttca 1364


Score = 63.9 bits (32), Expect = 4e-10
Identities = 32/32 (100%)
Strand = Plus / Plus


Query: 639 gttacagctattactaatacctcaacaaatac 670
||||||||||||||||||||||||||||||||
Sbjct: 639 gttacagctattactaatacctcaacaaatac 670


>Contig-U05046-1 (Contig-U05046-1Q) /CSM_Contig/Contig-U05046-1Q.Seq.d
Length = 1142

Score = 40.1 bits (20), Expect = 0.006
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 847 aagataatgaagataatgaa 866
||||||||||||||||||||
Sbjct: 123 aagataatgaagataatgaa 142


Score = 34.2 bits (17), Expect = 0.38
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 850 ataatgaagataatgaa 866
|||||||||||||||||
Sbjct: 117 ataatgaagataatgaa 133


>Contig-U14235-1 (Contig-U14235-1Q) /CSM_Contig/Contig-U14235-1Q.Seq.d
Length = 517

Score = 38.2 bits (19), Expect = 0.024
Identities = 25/27 (92%)
Strand = Plus / Plus


Query: 1039 gcaataataacaataaaaatgacaata 1065
|||||||||||||||| ||| ||||||
Sbjct: 278 gcaataataacaataacaataacaata 304


Score = 30.2 bits (15), Expect = 6.0
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 1040 caataataacaataa 1054
|||||||||||||||
Sbjct: 411 caataataacaataa 425


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 19,516
Number of Sequences: 6905
Number of extensions: 19516
Number of successful extensions: 3103
Number of sequences better than 10.0: 400
length of query: 1364
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1348
effective length of database: 5,564,391
effective search space: 7500799068
effective search space used: 7500799068
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.12. 8
Homology vs DNA
Query= Contig-U13346-1 (Contig-U13346-1Q) /CSM_Contig/Contig-U13346-1Q.Seq.d
(1364 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ359041) Dictyostelium discoideum cDNA clone:ddc12e13, 5' ... 1096 0.0 1
(BJ360451) Dictyostelium discoideum cDNA clone:ddc6l06, 5' e... 1092 0.0 1
(BJ361416) Dictyostelium discoideum cDNA clone:ddc17f04, 5' ... 1086 0.0 1
(BJ361896) Dictyostelium discoideum cDNA clone:ddc19b11, 5' ... 1084 0.0 1
(BJ329078) Dictyostelium discoideum cDNA clone:dda30n13, 5' ... 1082 0.0 1
(BJ323850) Dictyostelium discoideum cDNA clone:dda12f16, 5' ... 1082 0.0 1
(BJ358475) Dictyostelium discoideum cDNA clone:ddc1o18, 5' e... 1065 0.0 1
(AU062004) Dictyostelium discoideum slug cDNA, clone SLH156. 1029 0.0 1
(BJ387630) Dictyostelium discoideum cDNA clone:dds3i24, 5' e... 1025 0.0 1
(AU062153) Dictyostelium discoideum slug cDNA, clone SLH830. 664 0.0 3
(BJ374252) Dictyostelium discoideum cDNA clone:ddc6l06, 3' e... 551 0.0 3
(BJ346363) Dictyostelium discoideum cDNA clone:dda30n13, 3' ... 543 0.0 4
(BJ372415) Dictyostelium discoideum cDNA clone:ddc12e13, 3' ... 551 0.0 2
(BJ374999) Dictyostelium discoideum cDNA clone:ddc17f04, 3' ... 472 0.0 3
(BJ399055) Dictyostelium discoideum cDNA clone:dds3i24, 3' e... 551 0.0 4
(AU061911) Dictyostelium discoideum slug cDNA, clone SLG576. 652 0.0 1
(BJ375591) Dictyostelium discoideum cDNA clone:ddc19b11, 3' ... 537 e-176 3
(BJ371841) Dictyostelium discoideum cDNA clone:ddc1o18, 3' e... 287 e-166 5
(AU039462) Dictyostelium discoideum slug cDNA, clone SLH830. 440 e-166 2
(AU039211) Dictyostelium discoideum slug cDNA, clone SLH156. 194 2e-92 2
(BJ340314) Dictyostelium discoideum cDNA clone:dda12f16, 3' ... 127 1e-54 4
(FC603876) CAXS15011.fwd CAXS Lottia gigantea from head, foo... 100 1e-25 3
(FC648650) CAXW10229.fwd CAXW Lottia gigantea from female go... 92 3e-23 3
(BQ103759) ESTBB170018B10E01.3 Bee Brain Normalized/Subtract... 82 8e-18 2
(DB745662) Apis mellifera head cDNA, RIKEN full-length enric... 82 8e-18 2
(DB733316) Apis mellifera head cDNA, RIKEN full-length enric... 82 8e-18 2
(CF675483) tad02c03.y1 Hydra EST -IV Hydra magnipapillata cD... 56 1e-17 3
(CF655363) tac88e02.y1 Hydra EST -IV Hydra magnipapillata cD... 56 1e-17 3
(BP516463) Hydra magnipapillata cDNA, clone:hmp_12896. 56 1e-17 3
(DT609194) ACAG-aab05a05.g1 Hydra_EST_UCI-9 Hydra magnipapil... 56 2e-17 3
(DT606344) ACAG-aaa31c06.g1 Hydra_EST_UCI-9 Hydra magnipapil... 56 2e-17 3
(DB754470) Apis mellifera head cDNA, RIKEN full-length enric... 76 5e-16 2
(BP520832) Hydra magnipapillata cDNA, clone:hmp_18312. 56 2e-15 3
(AM854198) Crassostrea gigas EST, 5' end sequence, clone cDN... 62 4e-11 3
(CF675203) tad02c03.x1 Hydra EST -IV Hydra magnipapillata cD... 50 1e-09 2
(CD680876) tab60g10.x1 Hydra EST -III Hydra magnipapillata c... 50 1e-09 2
(CN626679) tae98d04.y1 Hydra EST Darmstadt I Hydra magnipapi... 50 1e-09 2
(CJ376336) Molgula tectiformis cDNA, gastrula/neurula clone:... 76 4e-09 1
(CJ372430) Molgula tectiformis cDNA, gastrula/neurula clone:... 76 4e-09 1
(CJ371225) Molgula tectiformis cDNA, gastrula/neurula clone:... 76 4e-09 1
(CJ368312) Molgula tectiformis cDNA, gastrula/neurula clone:... 76 4e-09 1
(CJ367467) Molgula tectiformis cDNA, gastrula/neurula clone:... 76 4e-09 1
(CJ367128) Molgula tectiformis cDNA, gastrula/neurula clone:... 76 4e-09 1
(FE263763) CAZO3451.fwd CAZO Naegleria gruberi Flagellate St... 76 4e-09 1
(FE263091) CAZO3030.fwd CAZO Naegleria gruberi Flagellate St... 76 4e-09 1
(EL404524) CFFS2458.b1_D15.ab1 CFF(LMS) safflower Carthamus ... 44 3e-08 3
(DW118617) CLRY7247.b1_N12.ab1 CLR(XYZ) lettuce serriola Lac... 44 4e-08 3
(DW119280) CLRY7887.b1_M04.ab1 CLR(XYZ) lettuce serriola Lac... 44 4e-08 3
(AL961528) Xenopus tropicalis EST, clone TGas128n16 5'. 52 8e-08 2
(CU075853) Xenopus tropicalis finished cDNA, clone TTpA033f19. 52 8e-08 3
(BU791087) 420DHGy3/Hgy3 female flower bud cucumber cDNA DH ... 50 9e-08 4
(BJ622214) Xenopus laevis cDNA clone:XL200d06, 5' end. 52 1e-07 2
(CX365329) JGI_XZT25770.fwd NIH_XGC_tropTad5 Xenopus (Silura... 52 1e-07 2
(DC047682) Xenopus laevis NBRP cDNA clone:xlk137i14ex, 5' end. 52 1e-07 2
(DY545889) AGENCOURT_69877173 NICHD_XGC_Emb10 Xenopus laevis... 52 1e-07 2
(CX932802) JGI_CAAO2534.fwd NIH_XGC_tropTe5 Xenopus (Siluran... 52 1e-07 2
(CB983919) AGENCOURT_13942945 NICHD_XGC_Tad1 Xenopus laevis ... 52 1e-07 2
(DC050116) Xenopus laevis NBRP cDNA clone:xlk144p11ex, 5' end. 52 1e-07 2
(EB468157) AGENCOURT_74307850 NICHD_XGC_limb_m Xenopus laevi... 52 1e-07 2
(CX881922) JGI_CAAL21019.fwd NIH_XGC_tropBrn4 Xenopus (Silur... 52 1e-07 2
(EB482797) AGENCOURT_73776577 NICHD_XGC_int_m Xenopus laevis... 52 1e-07 2
(BX716107) Xenopus tropicalis EST, clone TTpA033f19 5'. 52 1e-07 2
(FF390355) MOODA40TF MOO Vigna unguiculata cDNA 5', mRNA seq... 42 2e-07 5
(ES882814) CsB10dhB2_1 male flower bud cucumber cDNA DH B10/... 50 5e-07 4
(BC133182) Xenopus laevis hypothetical protein LOC100049091,... 52 5e-07 2
(EX304545) PvEST1790 Bean pod tissue cDNA Entry Library Phas... 38 1e-06 5
(FE692519) Pv032D_M13F_G10.ab1 Phaseolus vulgaris cv Early g... 38 1e-06 5
(BQ294492) 7 Melon seedling hypocotyl cDNA library Cucumis m... 50 3e-06 3
(AM741337) Cucumis melo subsp. melo EST, clone 46d_01-E04-M13R. 50 7e-06 3
(AM728091) Cucumis melo subsp. agrestis EST, clone A_13-D03-... 50 8e-06 3
(BF519664) EST457128 DSIL Medicago truncatula cDNA clone pDS... 40 1e-05 3
(BU668741) MC01034H01 MC01 Sesamum indicum cDNA, mRNA sequence. 48 1e-05 3
(CA917130) EST641277 GPOD Medicago truncatula cDNA clone GPO... 40 1e-05 3
(AW775219) EST331941 GVN Medicago truncatula cDNA clone pGVN... 40 1e-05 3
(CR563678) Xenopus tropicalis EST, clone THdA011d08 5'. 44 1e-05 2
(AW684918) NF023A09NR1F1000 Nodulated root Medicago truncatu... 40 2e-05 3
(AW690227) NF030F02ST1F1000 Developing stem Medicago truncat... 40 2e-05 3
(BC084992) Xenopus tropicalis ubiquitin-conjugating enzyme E... 44 2e-05 3
(BF649127) NF056A05EC1F1035 Elicited cell culture Medicago t... 40 2e-05 3
(AW692488) NF052A10ST1F1000 Developing stem Medicago truncat... 40 2e-05 3
(CR561388) Xenopus tropicalis EST, clone THdA011d15 5'. 44 2e-05 2
(BI266589) NF101E09IN1F1071 Insect herbivory Medicago trunca... 40 2e-05 3
(BF638332) NF054F07PL1F1061 Phosphate starved leaf Medicago ... 40 2e-05 3
(BG585192) EST486955 MHAM Medicago truncatula/Glomus versifo... 40 2e-05 3
(CX428727) JGI_XZG18925.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 2e-05 2
(BQ165052) EST610921 KVKC Medicago truncatula cDNA clone pKV... 40 2e-05 3
(DW016850) EST1225811 MTY Medicago truncatula cDNA clone MTY... 40 2e-05 3
(AL632817) Xenopus tropicalis EST, clone TGas021p15 5'. 44 2e-05 2
(DW016180) EST1225141 MTY Medicago truncatula cDNA clone MTY... 40 2e-05 3
(DW015619) EST1224580 MTY Medicago truncatula cDNA clone MTY... 40 2e-05 3
(AL967698) Xenopus tropicalis EST, clone TGas139k17 5'. 44 2e-05 2
(EY474106) META181TF JCVI-MT3 Medicago truncatula cDNA 5', m... 40 2e-05 3
(CX490426) JGI_XZG33242.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 2e-05 2
(CA917131) EST641278 GPOD Medicago truncatula cDNA clone GPO... 40 2e-05 3
(CX332665) JGI_XZT68698.fwd NIH_XGC_tropTad5 Xenopus (Silura... 44 2e-05 2
(ES675016) CCAX2099.b1 NICHD_XGC_tropEye1 Xenopus (Silurana)... 44 2e-05 2
(CX828204) JGI_CAAK6103.fwd NIH_XGC_tropBrn3 Xenopus (Silura... 44 2e-05 2
(CX317440) JGI_XZT67010.fwd NIH_XGC_tropTad5 Xenopus (Silura... 44 3e-05 2
(CX331530) JGI_XZT17111.fwd NIH_XGC_tropTad5 Xenopus (Silura... 44 3e-05 2
(CF219286) AGENCOURT_14970946 NICHD_XGC_Emb5 Xenopus (Silura... 44 3e-05 2

>(BJ359041) Dictyostelium discoideum cDNA clone:ddc12e13, 5' end,
single read.
Length = 557

Score = 1096 bits (553), Expect = 0.0
Identities = 556/557 (99%)
Strand = Plus / Plus


Query: 1 cctactggaaattaaaatatttgtattgcattatttatataatagagaaaataaactacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctactggaaattaaaatatttgtattgcattatttatataatagagaaaataaactacg 60


Query: 61 tacgttcaatggattcatgtaacccaaataacccagcagtaaaaagaatcctaagggaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacgttcaatggattcatgtaacccaaataacccagcagtaaaaagaatcctaagggaga 120


Query: 121 tacaagaacttagaaatgatacaaatccagattacaaagcatttcctttagaggacaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tacaagaacttagaaatgatacaaatccagattacaaagcatttcctttagaggacaata 180


Query: 181 tatttgagtggcattttacaataagaggaccacaagattcagattttaatggtggtattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatttgagtggcattttacaataagaggaccacaagattcagattttaatggtggtattt 240


Query: 241 accatggtagaattattttaccatctgaatatccattcaaaccaccaaatattgtattat 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 accatggtagaattatttcaccatctgaatatccattcaaaccaccaaatattgtattat 300


Query: 301 tgacaccaaatggtagatttgaaaccaatgtaaagatttgtttaactgtatcagcacacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgacaccaaatggtagatttgaaaccaatgtaaagatttgtttaactgtatcagcacacc 360


Query: 361 atccagaacattggcaaccatcttggagtattagaacagttttagttgcattaattggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atccagaacattggcaaccatcttggagtattagaacagttttagttgcattaattggat 420


Query: 421 ttatgccaacagaaggaaaaggtgcaattggtgctattgatttaccaacaaaagatagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttatgccaacagaaggaaaaggtgcaattggtgctattgatttaccaacaaaagatagaa 480


Query: 481 aggaattagcattaaaatcattagattggaaatgtacaagatgtggttcacataatcgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aggaattagcattaaaatcattagattggaaatgtacaagatgtggttcacataatcgtt 540


Query: 541 ttgctttgggtcaacca 557
|||||||||||||||||
Sbjct: 541 ttgctttgggtcaacca 557

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,321,089,816
Number of extensions: 83298991
Number of successful extensions: 7148865
Number of sequences better than 10.0: 395
Length of query: 1364
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1340
Effective length of database: 97,308,875,965
Effective search space: 130393893793100
Effective search space used: 130393893793100
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7. 6
Homology vs Protein
Query= Contig-U13346-1 (Contig-U13346-1Q) /CSM_Contig/Contig-U13346-1Q.Seq.d
(1364 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

FN318185_1(FN318185|pid:none) Schistosoma japonicum isolate Anhu... 221 6e-56
BT045033_1(BT045033|pid:none) Salmo salar clone ssal-rgf-510-139... 219 2e-55
AJ245897_1(AJ245897|pid:none) Gallus gallus mRNA for Non-Canonic... 216 2e-54
AK160428_1(AK160428|pid:none) Mus musculus adult male testis cDN... 214 4e-54
(Q9JJZ4) RecName: Full=Ubiquitin-conjugating enzyme E2 J1; ... 214 4e-54
AB464335_1(AB464335|pid:none) Synthetic construct DNA, clone: pF... 214 4e-54
(Q9UF10) RecName: Full=Ubiquitin-conjugating enzyme E2 J1; ... 214 4e-54
BC133182_1(BC133182|pid:none) Xenopus laevis hypothetical protei... 214 6e-54
AF151834_1(AF151834|pid:none) Homo sapiens CGI-76 protein mRNA, ... 212 2e-53
DQ027045_1(DQ027045|pid:none) Arabidopsis thaliana ubiquitinatin... 208 4e-52
U93243_1(U93243|pid:none) Homo sapiens Ubc6p homolog mRNA, compl... 207 7e-52
AK100355_1(AK100355|pid:none) Oryza sativa Japonica Group cDNA c... 206 2e-51
U23517_9(U23517|pid:none) Caenorhabditis elegans cosmid D1022, c... 203 1e-50
AK300629_1(AK300629|pid:none) Homo sapiens cDNA FLJ52165 complet... 202 2e-50
BT087586_1(BT087586|pid:none) Zea mays full-length cDNA clone ZM... 202 2e-50
EU960964_1(EU960964|pid:none) Zea mays clone 230028 unknown mRNA. 202 2e-50
T34195(T34195)hypothetical protein D1022.1 - Caenorhabditis eleg... 199 1e-49
U23517_10(U23517|pid:none) Caenorhabditis elegans cosmid D1022, ... 194 5e-48
BX842618_16(BX842618|pid:none) Neurospora crassa DNA linkage gro... 182 2e-44
CP001575_15(CP001575|pid:none) Micromonas sp. RCC299 chromosome ... 177 8e-43
AP007162_186(AP007162|pid:none) Aspergillus oryzae RIB40 genomic... 164 7e-39
AE017345_329(AE017345|pid:none) Cryptococcus neoformans var. neo... 152 2e-35
CP000586_196(CP000586|pid:none) Ostreococcus lucimarinus CCE9901... 144 7e-33
AM270350_1(AM270350|pid:none) Aspergillus niger contig An15c0230... 142 2e-32
AE014297_2449(AE014297|pid:none) Drosophila melanogaster chromos... 142 4e-32
FM992690_528(FM992690|pid:none) Candida dubliniensis CD36 chromo... 138 5e-31
BC079115_1(BC079115|pid:none) Rattus norvegicus ubiquitin-conjug... 137 9e-31
AL627204_1(AL627204|pid:none) Mouse DNA sequence from clone RP23... 137 9e-31
(Q6P073) RecName: Full=Ubiquitin-conjugating enzyme E2 J2; ... 137 9e-31
AF296656_1(AF296656|pid:none) Mus musculus ubiquitin conjugating... 137 9e-31
U93242_1(U93242|pid:none) Mus musculus Ubc6p homolog mRNA, compl... 137 9e-31
AK340236_1(AK340236|pid:none) Acyrthosiphon pisum ACYPI003183 mR... 137 9e-31
AF296658_1(AF296658|pid:none) Homo sapiens ubiquitin conjugating... 137 1e-30
AL162741_14(AL162741|pid:none) Human DNA sequence from clone RP5... 137 1e-30
AK291935_1(AK291935|pid:none) Homo sapiens cDNA FLJ77503 complet... 137 1e-30
FN357460_16(FN357460|pid:none) Schistosoma mansoni genome sequen... 136 2e-30
(Q2TA03) RecName: Full=Ubiquitin-conjugating enzyme E2 J2; ... 136 2e-30
BC155439_1(BC155439|pid:none) Xenopus tropicalis ubiquitin-conju... 135 3e-30
FN314952_1(FN314952|pid:none) Schistosoma japonicum isolate Anhu... 135 3e-30
BT080550_1(BT080550|pid:none) Caligus clemensi clone ccle-evs-50... 135 4e-30
BT056408_1(BT056408|pid:none) Salmo salar clone ssal-rgb2-575-31... 135 4e-30
FN314951_1(FN314951|pid:none) Schistosoma japonicum isolate Anhu... 134 6e-30
FN392319_753(FN392319|pid:none) Pichia pastoris GS115 chromosome... 134 8e-30
(Q74Z34) RecName: Full=Ubiquitin-conjugating enzyme E2 6; ... 134 1e-29
CP000496_763(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 132 2e-29
BT077786_1(BT077786|pid:none) Lepeophtheirus salmonis Pacific fo... 132 3e-29
AL627204_3(AL627204|pid:none) Mouse DNA sequence from clone RP23... 131 5e-29
(P33296) RecName: Full=Ubiquitin-conjugating enzyme E2 6; ... 131 5e-29
FN357460_17(FN357460|pid:none) Schistosoma mansoni genome sequen... 129 3e-28
CR382131_1235(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 128 5e-28
AM920428_581(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 126 2e-27
AP007172_23(AP007172|pid:none) Aspergillus oryzae RIB40 genomic ... 124 6e-27
D89248_1(D89248|pid:none) Schizosaccharomyces pombe mRNA, partia... 124 8e-27
(Q54LP7) RecName: Full=Ubiquitin-conjugating enzyme E2 J2; ... 123 1e-26
AY664416_8(AY664416|pid:none) Zea mays cultivar Mo17 locus bz, c... 121 5e-26
(Q9SHI7) RecName: Full=Ubiquitin carrier protein E2 34; ... 120 1e-25
AM502223_94(AM502223|pid:none) Leishmania infantum chromosome 5. 120 1e-25
AF391808_39(AF391808|pid:none) Zea mays cultivar McC bz locus re... 120 1e-25
AC080131_19(AC080131|pid:none) Trypanosoma brucei chromosome 4 c... 120 1e-25
EU338354_27(EU338354|pid:none) Zea mays cultivar W22 bz gene loc... 120 1e-25
DQ493646_8(DQ493646|pid:none) Zea mays cultivar CML258 bz locus ... 120 1e-25
BT035231_1(BT035231|pid:none) Zea mays full-length cDNA clone ZM... 119 2e-25
AK065085_1(AK065085|pid:none) Oryza sativa Japonica Group cDNA c... 119 2e-25
AE017346_222(AE017346|pid:none) Cryptococcus neoformans var. neo... 119 3e-25
CT005244_94(CT005244|pid:none) Leishmania major strain Friedlin,... 119 3e-25
AK056065_1(AK056065|pid:none) Homo sapiens cDNA FLJ31503 fis, cl... 116 2e-24
AM494957_89(AM494957|pid:none) Leishmania braziliensis chromosom... 113 1e-23
AM494957_87(AM494957|pid:none) Leishmania braziliensis chromosom... 113 1e-23
AM494957_90(AM494957|pid:none) Leishmania braziliensis chromosom... 113 1e-23
CT005271_94(CT005271|pid:none) Leishmania major strain Friedlin,... 112 2e-23
(Q5UQ57) RecName: Full=Probable ubiquitin-conjugating enzyme E2 ... 98 8e-19
CR382137_96(CR382137|pid:none) Debaryomyces hansenii strain CBS7... 95 7e-18
CP000600_58(CP000600|pid:none) Ostreococcus lucimarinus CCE9901 ... 92 3e-17
CR954214_68(CR954214|pid:none) Ostreococcus tauri strain OTTH059... 82 5e-14
DQ887084_1(DQ887084|pid:none) Arachis hypogaea ubiquitin-conjuga... 82 5e-14
BC109525_1(BC109525|pid:none) Bos taurus ubiquitin-conjugating e... 80 2e-13
AY813067_1(AY813067|pid:none) Schistosoma japonicum SJCHGC00720 ... 80 2e-13
AF424641_1(AF424641|pid:none) Phytophthora infestans clone MY-03... 79 4e-13
BT040054_1(BT040054|pid:none) Zea mays full-length cDNA clone ZM... 79 4e-13
AF325019_1(AF325019|pid:none) Arabidopsis thaliana AT4g27960 (AT... 79 5e-13
AE017346_284(AE017346|pid:none) Cryptococcus neoformans var. neo... 79 5e-13
AP008208_133(AP008208|pid:none) Oryza sativa (japonica cultivar-... 79 5e-13
BT070302_1(BT070302|pid:none) Picea sitchensis clone WS02719_E19... 79 5e-13
DQ027023_1(DQ027023|pid:none) Arabidopsis thaliana ubiquitinatin... 79 5e-13
(P35132) RecName: Full=SUMO-conjugating enzyme UBC9; EC... 79 5e-13
BC055599_1(BC055599|pid:none) Danio rerio zgc:66323, mRNA (cDNA ... 78 7e-13
(Q94F47) RecName: Full=Ubiquitin carrier protein E2 28; ... 78 7e-13
AB074412_1(AB074412|pid:none) Oryza sativa Japonica Group mRNA f... 78 7e-13
AY736121_1(AY736121|pid:none) Triticum aestivum ubiquitin-conjug... 78 7e-13
DQ222513_1(DQ222513|pid:none) Solanum tuberosum clone 117E03 ubi... 78 7e-13
CP000881_158(CP000881|pid:none) Hemiselmis andersenii chromosome... 78 9e-13
EF145004_1(EF145004|pid:none) Populus trichocarpa clone WS0111_H... 78 9e-13
(P25867) RecName: Full=Ubiquitin-conjugating enzyme E2-17 kDa; ... 78 9e-13
CR382130_616(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 78 9e-13
AY082004_1(AY082004|pid:none) Gossypium hirsutum ubiquitin-conju... 78 9e-13
BT082300_1(BT082300|pid:none) Anoplopoma fimbria clone afim-evh-... 78 9e-13
EU853458_1(EU853458|pid:none) Cucumis melo var. cantalupensis ub... 78 9e-13
EU586201_1(EU586201|pid:none) Malus x domestica cultivar Fuji ub... 78 9e-13
AY231898_1(AY231898|pid:none) Drosophila yakuba clone yak-em_eff... 78 9e-13
BT070503_1(BT070503|pid:none) Picea sitchensis clone WS02732_O01... 77 1e-12
AE014134_240(AE014134|pid:none) Drosophila melanogaster chromoso... 77 1e-12
AY082009_1(AY082009|pid:none) Gossypium thurberi ubiquitin-conju... 77 1e-12
AY082005_1(AY082005|pid:none) Gossypium hirsutum ubiquitin-conju... 77 1e-12
BT070291_1(BT070291|pid:none) Picea sitchensis clone WS02718_B23... 77 1e-12
BT053431_1(BT053431|pid:none) Medicago truncatula clone MTYFP_FQ... 77 1e-12
BC142569_1(BC142569|pid:none) Xenopus laevis ubiquitin conjugati... 77 1e-12
AM464235_1(AM464235|pid:none) Vitis vinifera contig VV78X153506.... 77 1e-12
EF147515_1(EF147515|pid:none) Populus trichocarpa clone WS0123_B... 77 1e-12
(Q9SLE4) RecName: Full=Ubiquitin carrier protein E2 29; ... 77 1e-12
EF146072_1(EF146072|pid:none) Populus trichocarpa clone WS0115_F... 77 1e-12
BT075389_1(BT075389|pid:none) Osmerus mordax clone omor-eva-513-... 77 1e-12
BC076728_1(BC076728|pid:none) Xenopus laevis ubiquitin-conjugati... 77 1e-12
EU593895_1(EU593895|pid:none) Brassica napus E2 ubiquitin-conjug... 77 1e-12
AY811864_1(AY811864|pid:none) Schistosoma japonicum SJCHGC02746 ... 77 1e-12
(P35135) RecName: Full=Ubiquitin-conjugating enzyme E2-17 kDa; ... 77 1e-12
EU586200_1(EU586200|pid:none) Malus x domestica cultivar Fuji ub... 77 1e-12
AY489135_1(AY489135|pid:none) Capsicum annuum ubiquitin-conjugat... 77 2e-12
(P35129) RecName: Full=Ubiquitin-conjugating enzyme E2 2; ... 77 2e-12
(P35131) RecName: Full=Ubiquitin-conjugating enzyme E2 8; ... 77 2e-12
AM181595_1(AM181595|pid:none) Oesophagostomum dentatum mRNA for ... 77 2e-12
EF085158_1(EF085158|pid:none) Picea sitchensis clone WS0285_M23 ... 77 2e-12
AM427228_1(AM427228|pid:none) Vitis vinifera contig VV78X183533.... 76 2e-12
GM966533_1(GM966533|pid:none) Sequence 1865 from Patent WO200814... 76 2e-12
(P51668) RecName: Full=Ubiquitin-conjugating enzyme E2 D1; ... 76 2e-12
EU244369_1(EU244369|pid:none) Haliotis diversicolor clone HDr4CJ... 76 2e-12
AJ843120_1(AJ843120|pid:none) Plantago major mRNA for Ubiquitin-... 76 2e-12
(Q06AA9) RecName: Full=Ubiquitin-conjugating enzyme E2 D2; ... 76 2e-12
AK152231_1(AK152231|pid:none) Mus musculus bone marrow macrophag... 76 2e-12
BT034602_1(BT034602|pid:none) Zea mays full-length cDNA clone ZM... 76 2e-12
I59365(I59365) ubiquitin conjugating enzyme - human &L40146_1(L... 76 2e-12
(P61077) RecName: Full=Ubiquitin-conjugating enzyme E2 D3; ... 76 2e-12
GM966541_1(GM966541|pid:none) Sequence 1873 from Patent WO200814... 76 2e-12
AK009276_1(AK009276|pid:none) Mus musculus adult male tongue cDN... 76 2e-12
AK095822_1(AK095822|pid:none) Homo sapiens cDNA FLJ38503 fis, cl... 76 2e-12
(Q3ZCF7) RecName: Full=Ubiquitin-conjugating enzyme E2 D3; ... 76 2e-12
BC066917_1(BC066917|pid:none) Homo sapiens ubiquitin-conjugating... 76 2e-12
AX406018_1(AX406018|pid:none) Sequence 433 from Patent WO0222660. 76 2e-12
EU960465_1(EU960465|pid:none) Zea mays clone 225114 ubiquitin-co... 76 3e-12
DQ207855_1(DQ207855|pid:none) Solanum tuberosum clone 078A09 ubi... 76 3e-12
(P46595) RecName: Full=Ubiquitin-conjugating enzyme E2 4; ... 76 3e-12
EU957802_1(EU957802|pid:none) Zea mays clone 1623065 ubiquitin-c... 76 3e-12
BT057031_1(BT057031|pid:none) Salmo salar clone ssal-evd-502-245... 76 3e-12
BC059548_1(BC059548|pid:none) Danio rerio ubiquitin-conjugating ... 76 3e-12
BC048896_1(BC048896|pid:none) Danio rerio zgc:55886, mRNA (cDNA ... 76 3e-12
(Q9FKT3) RecName: Full=Ubiquitin carrier protein E2 30; ... 76 3e-12
AY083611_1(AY083611|pid:none) Oryza sativa elicitor and UV light... 76 3e-12
DQ144988_1(DQ144988|pid:none) Symbiodinium sp. C3 ubiquitin conj... 76 3e-12
(P35133) RecName: Full=Ubiquitin-conjugating enzyme E2 10; ... 76 3e-12
BT057415_1(BT057415|pid:none) Salmo salar clone ssal-eve-568-290... 76 3e-12
AP003446_10(AP003446|pid:none) Oryza sativa Japonica Group genom... 75 4e-12
AY814691_1(AY814691|pid:none) Schistosoma japonicum SJCHGC02747 ... 75 4e-12
FN357441_2(FN357441|pid:none) Schistosoma mansoni genome sequenc... 75 4e-12
BT046784_1(BT046784|pid:none) Salmo salar clone ssal-eve-547-308... 75 4e-12
AF034946_1(AF034946|pid:none) Zea mays ubiquitin conjugating enz... 75 4e-12
BC047863_1(BC047863|pid:none) Danio rerio zgc:56340, mRNA (cDNA ... 75 4e-12
AF026506_1(AF026506|pid:none) Drosophila silvestris ubiquitin-co... 75 4e-12
BT034735_1(BT034735|pid:none) Zea mays full-length cDNA clone ZM... 75 4e-12
BC155782_1(BC155782|pid:none) Danio rerio zgc:56340, mRNA (cDNA ... 75 4e-12
BT056835_1(BT056835|pid:none) Salmo salar clone ssal-plnb-027-15... 75 4e-12
AF001948_1(AF001948|pid:none) Pinus resinosa putative ubiquitin ... 75 6e-12
AK059627_1(AK059627|pid:none) Oryza sativa Japonica Group cDNA c... 75 6e-12
BT079155_1(BT079155|pid:none) Esox lucius clone eluc-evq-525-194... 75 6e-12
AM920435_793(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 75 6e-12
(P35134) RecName: Full=Ubiquitin-conjugating enzyme E2 11; ... 75 6e-12
AB099076_1(AB099076|pid:none) Bos taurus mRNA for similar to pho... 75 7e-12
BT078441_1(BT078441|pid:none) Lepeophtheirus salmonis Pacific fo... 75 7e-12
BT077825_1(BT077825|pid:none) Lepeophtheirus salmonis Pacific fo... 75 7e-12
AM181594_1(AM181594|pid:none) Oesophagostomum dentatum mRNA for ... 75 7e-12
(Q9LJD7) RecName: Full=Constitutive photomorphogenesis protein 1... 74 9e-12
AK317108_1(AK317108|pid:none) Arabidopsis thaliana AT3G13550 mRN... 74 9e-12
AP007167_66(AP007167|pid:none) Aspergillus oryzae RIB40 genomic ... 74 1e-11
EF144962_1(EF144962|pid:none) Populus trichocarpa clone WS0111_C... 74 1e-11
EU976228_1(EU976228|pid:none) Zea mays clone 688590 ubiquitin-co... 74 2e-11
CR940352_416(CR940352|pid:none) Theileria annulata strain Ankara... 74 2e-11
AB074411_1(AB074411|pid:none) Oryza sativa Japonica Group mRNA f... 74 2e-11
AC148404_22(AC148404|pid:none) Medicago truncatula clone mth2-28... 74 2e-11
AF161722_1(AF161722|pid:none) Magnaporthe grisea ubiquitin-conju... 73 2e-11
EU972165_1(EU972165|pid:none) Zea mays clone 376667 ubiquitin-co... 73 2e-11
DQ228113_4(DQ228113|pid:none) Hanusia phi strain CCMP325 18S rib... 73 2e-11
AK316720_1(AK316720|pid:none) Arabidopsis thaliana AT5G41700 mRN... 73 2e-11
AL672098_4(AL672098|pid:none) Mouse DNA sequence from clone RP23... 73 2e-11
AL162741_15(AL162741|pid:none) Human DNA sequence from clone RP5... 73 2e-11
AE016820_490(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 73 3e-11
(O74196) RecName: Full=Ubiquitin-conjugating enzyme E2-16 kDa; ... 73 3e-11
AC007764_2(AC007764|pid:none) Genomic sequence for Arabidopsis t... 73 3e-11
CR382125_338(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 73 3e-11
AY220735_1(AY220735|pid:none) Hordeum vulgare ubiquitin-conjugat... 72 4e-11
CR382125_546(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 72 4e-11
BC048523_1(BC048523|pid:none) Mus musculus predicted gene, EG237... 72 4e-11
AB172309_1(AB172309|pid:none) Macaca fascicularis brain cDNA clo... 72 5e-11
AY891186_1(AY891186|pid:none) Synthetic construct Homo sapiens c... 72 5e-11
BT045559_1(BT045559|pid:none) Salmo salar clone ssal-rgf-524-350... 72 5e-11
BT043519_1(BT043519|pid:none) Salmo salar clone HM4_1156 ubiquit... 72 5e-11
AY281323_1(AY281323|pid:none) Xenopus laevis ubiquitin-conjugati... 72 5e-11
BC042331_1(BC042331|pid:none) Danio rerio ubiquitin-conjugating ... 72 5e-11
(P52483) RecName: Full=Ubiquitin-conjugating enzyme E2 E3; ... 72 5e-11
DQ228115_1(DQ228115|pid:none) Proteomonas sulcata strain CCMP704... 72 6e-11
(P43102) RecName: Full=Ubiquitin-conjugating enzyme E2 4; ... 72 6e-11
GM966539_1(GM966539|pid:none) Sequence 1871 from Patent WO200814... 72 6e-11
AM494971_122(AM494971|pid:none) Leishmania braziliensis chromoso... 72 6e-11
(P15731) RecName: Full=Ubiquitin-conjugating enzyme E2 4; ... 71 8e-11
GM966535_1(GM966535|pid:none) Sequence 1867 from Patent WO200814... 71 8e-11
BT046386_1(BT046386|pid:none) Salmo salar clone ssal-eve-564-281... 71 8e-11
AY632078_1(AY632078|pid:none) Clonorchis sinensis ubiquitin-conj... 71 1e-10
CU638744_764(CU638744|pid:none) Podospora anserina genomic DNA c... 71 1e-10
AK059694_1(AK059694|pid:none) Oryza sativa Japonica Group cDNA c... 71 1e-10
AB105548_1(AB105548|pid:none) Xenopus laevis Xubc15 mRNA for ubi... 71 1e-10
FM992695_868(FM992695|pid:none) Candida dubliniensis CD36 chromo... 70 1e-10
CR380951_194(CR380951|pid:none) Candida glabrata strain CBS138 c... 70 1e-10
(Q96LR5) RecName: Full=Ubiquitin-conjugating enzyme E2 E2; ... 70 2e-10
DQ972954_1(DQ972954|pid:none) Sus scrofa UB2E2 mRNA, complete cds. 70 2e-10
BC082838_1(BC082838|pid:none) Xenopus laevis hypothetical LOC494... 70 2e-10
BC077923_1(BC077923|pid:none) Xenopus laevis hypothetical LOC494... 70 2e-10
BC079134_1(BC079134|pid:none) Rattus norvegicus ubiquitin-conjug... 70 2e-10
BT074944_1(BT074944|pid:none) Osmerus mordax clone omor-rgc-511-... 70 2e-10
BT045620_1(BT045620|pid:none) Salmo salar clone ssal-rgf-526-297... 70 2e-10
AK295354_1(AK295354|pid:none) Homo sapiens cDNA FLJ52264 complet... 70 2e-10
BC099169_1(BC099169|pid:none) Rattus norvegicus ubiquitin-conjug... 70 2e-10
(Q91W82) RecName: Full=Ubiquitin-conjugating enzyme E2 E2; ... 70 2e-10
BC061394_1(BC061394|pid:none) Xenopus tropicalis ubiquitin-conju... 70 2e-10
BT069771_1(BT069771|pid:none) Zea mays full-length cDNA clone ZM... 70 2e-10
DQ217367_1(DQ217367|pid:none) Taeniopygia guttata clone 0058P004... 70 2e-10
(Q4R4I1) RecName: Full=Ubiquitin-conjugating enzyme E2 N; ... 70 2e-10
EF146699_1(EF146699|pid:none) Populus trichocarpa clone WS01212_... 70 2e-10
DQ480743_1(DQ480743|pid:none) Rattus norvegicus clone ZX34 unkno... 70 2e-10
EF677016_1(EF677016|pid:none) Picea sitchensis clone WS02760_C17... 69 3e-10
CU928174_488(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 69 3e-10
AC159432_15(AC159432|pid:none) Trypanosoma brucei chromosome 5 c... 69 3e-10
BT034037_1(BT034037|pid:none) Zea mays full-length cDNA clone ZM... 69 3e-10
AF136176_1(AF136176|pid:none) Homo sapiens ubiquitin-conjugating... 69 4e-10
AM270282_9(AM270282|pid:none) Aspergillus niger contig An12c0260... 69 4e-10
BT079919_1(BT079919|pid:none) Esox lucius clone eluc-evq-517-214... 69 4e-10
(Q8LGF7) RecName: Full=Probable ubiquitin carrier protein E2 21;... 69 4e-10
BT057192_1(BT057192|pid:none) Salmo salar clone ssal-eve-549-287... 69 4e-10
(Q9UTN8) RecName: Full=Ubiquitin-conjugating enzyme E2 14; ... 69 4e-10
BT057585_1(BT057585|pid:none) Salmo salar clone ssal-eve-534-384... 69 4e-10
CP000497_479(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 69 4e-10
BT056474_1(BT056474|pid:none) Salmo salar clone ssal-evd-521-050... 69 4e-10
BT074238_1(BT074238|pid:none) Oncorhynchus mykiss clone omyk-evo... 69 4e-10
CU928181_242(CU928181|pid:none) Zygosaccharomyces rouxii strain ... 69 4e-10
AE014296_727(AE014296|pid:none) Drosophila melanogaster chromoso... 69 5e-10
AP007166_113(AP007166|pid:none) Aspergillus oryzae RIB40 genomic... 69 5e-10
AK005788_1(AK005788|pid:none) Mus musculus adult male testis cDN... 69 5e-10
DQ321735_1(DQ321735|pid:none) Schistosoma mansoni RAD6 mRNA, com... 69 5e-10
CR382123_762(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 69 5e-10
FN357687_9(FN357687|pid:none) Schistosoma mansoni genome sequenc... 69 5e-10
CR380959_331(CR380959|pid:none) Candida glabrata strain CBS138 c... 69 5e-10
(P61088) RecName: Full=Ubiquitin-conjugating enzyme E2 N; ... 69 5e-10
(Q9EQX9) RecName: Full=Ubiquitin-conjugating enzyme E2 N; ... 69 5e-10
AY223038_1(AY223038|pid:none) Schistosoma japonicum SJCHGC01675 ... 69 5e-10
(P52485) RecName: Full=Ubiquitin-conjugating enzyme E2-24 kDa; ... 69 5e-10
(P15732) RecName: Full=Ubiquitin-conjugating enzyme E2-16 kDa; ... 69 5e-10
BC064184_1(BC064184|pid:none) Xenopus tropicalis ubiquitin-conju... 69 5e-10
FM992695_813(FM992695|pid:none) Candida dubliniensis CD36 chromo... 68 7e-10
BC053141_1(BC053141|pid:none) Danio rerio ubiquitin-conjugating ... 68 7e-10
AF461687_1(AF461687|pid:none) Pinus pinaster putative ubiquitin ... 68 7e-10
BC044461_1(BC044461|pid:none) Danio rerio ubiquitin-conjugating ... 68 7e-10
BT075359_1(BT075359|pid:none) Osmerus mordax clone omor-eva-519-... 68 7e-10
BC053797_1(BC053797|pid:none) Xenopus laevis ubiquitin-conjugati... 68 7e-10
CR940347_494(CR940347|pid:none) Theileria annulata strain Ankara... 68 9e-10
GM966557_1(GM966557|pid:none) Sequence 1889 from Patent WO200814... 68 9e-10
CU633899_608(CU633899|pid:none) Podospora anserina genomic DNA c... 68 9e-10
BT030506_1(BT030506|pid:none) Bos taurus ubiquitin-conjugating e... 68 9e-10
CP001326_415(CP001326|pid:none) Micromonas sp. RCC299 chromosome... 68 9e-10
(Q02159) RecName: Full=Ubiquitin-conjugating enzyme E2-18 kDa; ... 68 9e-10
CU928171_602(CU928171|pid:none) Kluyveromyces thermotolerans str... 68 9e-10
AM920437_2378(AM920437|pid:none) Penicillium chrysogenum Wiscons... 68 9e-10
FN392321_727(FN392321|pid:none) Pichia pastoris GS115 chromosome... 67 1e-09
EF146240_1(EF146240|pid:none) Populus trichocarpa clone WS0116_H... 67 1e-09
EU284925_1(EU284925|pid:none) TSA: Elaeis guineensis EgEfMPOB001... 67 1e-09
AJ277746_1(AJ277746|pid:none) Drosophila melanogaster mRNA for u... 67 1e-09
AJ298327_1(AJ298327|pid:none) Platichthys flesus partial mRNA fo... 67 1e-09
DQ443216_1(DQ443216|pid:none) Bombyx mori ubiquitin conjugating ... 67 1e-09
FN357441_5(FN357441|pid:none) Schistosoma mansoni genome sequenc... 67 2e-09
CU928175_205(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 67 2e-09
AE014134_2590(AE014134|pid:none) Drosophila melanogaster chromos... 67 2e-09
(Q9C9Y7) RecName: Full=Probable ubiquitin-conjugating enzyme E2 ... 67 2e-09
(Q9NTT1) Putative ubiquitin-conjugating enzyme E2 D3-like protei... 67 2e-09
EU595015_1(EU595015|pid:none) Myxobolus cerebralis clone 1J3 ubi... 67 2e-09
BT074069_1(BT074069|pid:none) Oncorhynchus mykiss clone omyk-evo... 67 2e-09
AF510491_1(AF510491|pid:none) Danio rerio ubiquitin conjugating ... 67 2e-09
AK343178_1(AK343178|pid:none) Acyrthosiphon pisum ACYPI006341 mR... 67 2e-09
AY148222_1(AY148222|pid:none) Sus scrofa E2 ubiquitin-conjugatin... 67 2e-09
EF145085_1(EF145085|pid:none) Populus trichocarpa clone WS01120_... 66 3e-09
AY826157_1(AY826157|pid:none) Aedes albopictus clone AL_336 ubiq... 66 3e-09
(Q6FR76) RecName: Full=Ubiquitin-conjugating enzyme E2 2; ... 66 3e-09
AK161968_1(AK161968|pid:none) Mus musculus adult male olfactory ... 66 3e-09
EU431335_1(EU431335|pid:none) Marsupenaeus japonicus ubiquitin-c... 66 3e-09
BT071782_1(BT071782|pid:none) Picea sitchensis clone WS0454_N05 ... 66 3e-09
AM494959_56(AM494959|pid:none) Leishmania braziliensis chromosom... 66 3e-09
BT074151_1(BT074151|pid:none) Oncorhynchus mykiss clone omyk-evo... 66 3e-09
AE014296_2694(AE014296|pid:none) Drosophila melanogaster chromos... 66 3e-09
AE014296_2692(AE014296|pid:none) Drosophila melanogaster chromos... 66 3e-09
BT076385_1(BT076385|pid:none) Caligus rogercresseyi clone crog-e... 66 3e-09
(P52490) RecName: Full=Ubiquitin-conjugating enzyme E2 13; ... 66 3e-09
BT081065_1(BT081065|pid:none) Caligus clemensi clone ccle-evs-51... 66 3e-09
EF082769_1(EF082769|pid:none) Picea sitchensis clone WS0277_E18 ... 65 4e-09
AK105320_1(AK105320|pid:none) Oryza sativa Japonica Group cDNA c... 65 4e-09
EU247218_1(EU247218|pid:none) Lycosa singoriensis clone LSsin186... 65 4e-09
EF145757_1(EF145757|pid:none) Populus trichocarpa clone WS0113_D... 65 4e-09
CR382129_20(CR382129|pid:none) Yarrowia lipolytica strain CLIB12... 65 6e-09
AL110500_18(AL110500|pid:none) Caenorhabditis elegans YAC Y87G2A... 65 6e-09
CP001330_132(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 65 7e-09
BT038939_1(BT038939|pid:none) Zea mays full-length cDNA clone ZM... 65 7e-09
AE017345_305(AE017345|pid:none) Cryptococcus neoformans var. neo... 65 7e-09
(P25869) RecName: Full=Ubiquitin-conjugating enzyme E2; ... 65 7e-09
FN317000_1(FN317000|pid:none) Schistosoma japonicum isolate Anhu... 65 7e-09
FN357392_23(FN357392|pid:none) Schistosoma mansoni genome sequen... 65 7e-09
EU952491_1(EU952491|pid:none) Zea mays clone 1282033 ubiquitin-c... 65 7e-09
BT061792_1(BT061792|pid:none) Zea mays full-length cDNA clone ZM... 65 7e-09
AY826156_1(AY826156|pid:none) Aedes albopictus clone AL_265 ubiq... 65 7e-09
CR380953_344(CR380953|pid:none) Candida glabrata strain CBS138 c... 65 7e-09
AK122067_1(AK122067|pid:none) Oryza sativa Japonica Group cDNA c... 65 7e-09
BT011473_1(BT011473|pid:none) Drosophila melanogaster RE15288 fu... 65 7e-09
CU633438_434(CU633438|pid:none) Podospora anserina genomic DNA c... 65 7e-09
AC150706_14(AC150706|pid:none) Medicago truncatula clone mth2-13... 65 7e-09
CP000500_524(CP000500|pid:none) Pichia stipitis CBS 6054 chromos... 64 1e-08
AY291287_1(AY291287|pid:none) Bos taurus E2 ubiquitin conjugatin... 64 1e-08
AY135219_1(AY135219|pid:none) Pavlova lutheri ubiquitin-conjugat... 64 1e-08
BT078288_1(BT078288|pid:none) Lepeophtheirus salmonis Pacific fo... 64 1e-08
T14451(T14451) ubiquitin conjugating enzyme, E2 - wild cabbage (... 64 1e-08
AP003804_13(AP003804|pid:none) Oryza sativa Japonica Group genom... 64 1e-08
EF146216_1(EF146216|pid:none) Populus trichocarpa clone WS0116_E... 64 1e-08
(Q8L7T3) RecName: Full=Ubiquitin carrier protein E2 20; ... 64 1e-08
AK342968_1(AK342968|pid:none) Acyrthosiphon pisum ACYPI001111 mR... 64 1e-08
DQ144986_1(DQ144986|pid:none) Symbiodinium sp. C3 ubiquitin conj... 64 1e-08
CR940352_300(CR940352|pid:none) Theileria annulata strain Ankara... 63 2e-08
EF585789_1(EF585789|pid:none) Sonneratia caseolaris isolate Sonn... 63 2e-08
FN357349_33(FN357349|pid:none) Schistosoma mansoni genome sequen... 63 2e-08
(Q9LJZ5) RecName: Full=Ubiquitin carrier protein E2 19; ... 63 2e-08
FN392321_948(FN392321|pid:none) Pichia pastoris GS115 chromosome... 63 2e-08
EU399687_1(EU399687|pid:none) Salvia officinalis uqibuitin-prote... 63 2e-08
EF585788_1(EF585788|pid:none) Sonneratia alba isolate Sonn199_1 ... 63 2e-08
AK343174_1(AK343174|pid:none) Acyrthosiphon pisum ACYPI001299 mR... 63 2e-08
EU975078_1(EU975078|pid:none) Zea mays clone 466704 unknown mRNA. 63 3e-08
EU333281_1(EU333281|pid:none) Bursaphelenchus xylophilus ubiquit... 63 3e-08
(Q6BU36) RecName: Full=Ubiquitin-conjugating enzyme E2 2; ... 63 3e-08
EF145179_1(EF145179|pid:none) Populus trichocarpa clone WS01121_... 63 3e-08
AE017345_391(AE017345|pid:none) Cryptococcus neoformans var. neo... 63 3e-08
AC159407_39(AC159407|pid:none) Trypanosoma brucei chromosome 8 c... 63 3e-08
(Q54XS6) RecName: Full=Probable ubiquitin-conjugating enzyme E2 ... 63 3e-08
AY221464_1(AY221464|pid:none) Ovis aries UbcH5B mRNA, partial cds. 62 4e-08
AL844509_547(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 62 4e-08
EU956203_1(EU956203|pid:none) Zea mays clone 1558972 hypothetica... 62 4e-08
AC079279_3(AC079279|pid:none) Arabidopsis thaliana chromosome 1 ... 62 4e-08
AY815595_1(AY815595|pid:none) Schistosoma japonicum SJCHGC08994 ... 62 4e-08
AC025726_13(AC025726|pid:none) Caenorhabditis elegans cosmid Y71... 62 5e-08
AL844502_188(AL844502|pid:none) Plasmodium falciparum 3D7 chromo... 62 5e-08
AM712240_140(AM712240|pid:none) African swine fever virus OURT 8... 62 5e-08
DQ848992_1(DQ848992|pid:none) Trachemys scripta ubiquitin-conjug... 62 5e-08
T18512(T18512)hypothetical protein C0855w - malaria parasite (Pl... 62 5e-08
CR940347_711(CR940347|pid:none) Theileria annulata strain Ankara... 62 5e-08
BT081008_1(BT081008|pid:none) Caligus clemensi clone ccle-evs-50... 62 5e-08
AY542992_1(AY542992|pid:none) Bigelowiella natans ubiquitin conj... 62 6e-08
BT001441_1(BT001441|pid:none) Drosophila melanogaster GH25305 fu... 62 6e-08
AL139794_13(AL139794|pid:none) Leishmania major Friedlin chromos... 62 6e-08
(P52478) RecName: Full=Ubiquitin-conjugating enzyme E2 1; ... 62 6e-08
AM494941_87(AM494941|pid:none) Leishmania braziliensis chromosom... 61 8e-08
AM479964_2(AM479964|pid:none) Vitis vinifera contig VV78X057791.... 61 8e-08
FN392321_367(FN392321|pid:none) Pichia pastoris GS115 chromosome... 61 8e-08
EU963040_1(EU963040|pid:none) Zea mays clone 256705 ubiquitin-co... 61 8e-08
AM920433_118(AM920433|pid:none) Penicillium chrysogenum Wisconsi... 61 1e-07
EF066642_1(EF066642|pid:none) Trichinella spiralis clone T3125 u... 61 1e-07
EU951840_1(EU951840|pid:none) Zea mays clone 1061423 unknown mRNA. 61 1e-07
BT077894_1(BT077894|pid:none) Lepeophtheirus salmonis Pacific fo... 61 1e-07
AP007164_336(AP007164|pid:none) Aspergillus oryzae RIB40 genomic... 61 1e-07
(Q9Y818) RecName: Full=Ubiquitin-conjugating enzyme E2 15; ... 61 1e-07
CR954214_340(CR954214|pid:none) Ostreococcus tauri strain OTTH05... 60 1e-07
S61417(S61417;S61418;S72311)ubiquitin-protein ligase (EC 6.3.2.1... 60 1e-07
(O00102) RecName: Full=Ubiquitin-conjugating enzyme E2-18 kDa; ... 60 1e-07
BT076184_1(BT076184|pid:none) Caligus rogercresseyi clone crog-e... 60 1e-07
AY891220_1(AY891220|pid:none) Synthetic construct Homo sapiens c... 60 1e-07
FN357618_8(FN357618|pid:none) Schistosoma mansoni genome sequenc... 60 1e-07
EU974824_1(EU974824|pid:none) Zea mays clone 459136 ubiquitin-co... 60 1e-07
(P63146) RecName: Full=Ubiquitin-conjugating enzyme E2 B; ... 60 1e-07
AK341528_1(AK341528|pid:none) Acyrthosiphon pisum ACYPI000705 mR... 60 2e-07
AL844518_5(AL844518|pid:none) Zebrafish DNA sequence from clone ... 60 2e-07
CR382131_195(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 60 2e-07
FN357349_34(FN357349|pid:none) Schistosoma mansoni genome sequen... 60 2e-07
CP001323_218(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 60 2e-07
EU170471_1(EU170471|pid:none) Eucommia ulmoides ubiquitin conjug... 60 2e-07
AC159413_39(AC159413|pid:none) Trypanosoma brucei chromosome 7 c... 60 2e-07
AF076597_1(AF076597|pid:none) Dictyostelium discoideum ubiquitin... 60 2e-07
FJ168552_19(FJ168552|pid:none) Bodo saltans clone fosmid 45A12, ... 60 2e-07
D78372_1(D78372|pid:none) Neurospora crassa DNA for mus-8, compl... 60 2e-07
FM992692_56(FM992692|pid:none) Candida dubliniensis CD36 chromos... 60 2e-07
CU638744_485(CU638744|pid:none) Podospora anserina genomic DNA c... 60 2e-07
AM910993_147(AM910993|pid:none) Plasmodium knowlesi strain H chr... 60 2e-07
AK062230_1(AK062230|pid:none) Oryza sativa Japonica Group cDNA c... 60 2e-07
(P52493) RecName: Full=Ubiquitin-conjugating enzyme E2 2; ... 60 2e-07
(O60015) RecName: Full=Ubiquitin-conjugating enzyme E2-21 kDa; ... 59 3e-07
AC159405_40(AC159405|pid:none) Trypanosoma brucei chromosome 8 c... 59 3e-07
AL844508_209(AL844508|pid:none) Plasmodium falciparum 3D7 chromo... 59 3e-07
(P0C8G5) RecName: Full=Ubiquitin-conjugating enzyme E2; ... 59 3e-07
AY892102_1(AY892102|pid:none) Synthetic construct Homo sapiens c... 59 3e-07
BT034799_1(BT034799|pid:none) Zea mays full-length cDNA clone ZM... 59 3e-07
AE017344_202(AE017344|pid:none) Cryptococcus neoformans var. neo... 59 4e-07
BC102100_1(BC102100|pid:none) Bos taurus ubiquitin-conjugating e... 59 4e-07
DQ284472_1(DQ284472|pid:none) Solanum tuberosum clone 116D11 ubi... 59 4e-07
AY232079_1(AY232079|pid:none) Drosophila yakuba clone yak-ad_crl... 59 4e-07
BT082432_1(BT082432|pid:none) Anoplopoma fimbria clone afim-evh-... 59 4e-07
DQ311425_1(DQ311425|pid:none) Bombyx mori ubiquitin conjugating ... 59 4e-07
EU963388_1(EU963388|pid:none) Zea mays clone 261750 ubiquitin-co... 59 4e-07
(P49459) RecName: Full=Ubiquitin-conjugating enzyme E2 A; ... 59 4e-07
BC045512_1(BC045512|pid:none) Danio rerio ubiquitin-conjugating ... 59 4e-07
(O00762) RecName: Full=Ubiquitin-conjugating enzyme E2 C; ... 59 4e-07
AL513444_21(AL513444|pid:none) Neurospora crassa DNA linkage gro... 59 4e-07
(P62253) RecName: Full=Ubiquitin-conjugating enzyme E2 G1; ... 59 4e-07
AY891303_1(AY891303|pid:none) Synthetic construct Homo sapiens c... 59 4e-07
D85544_1(D85544|pid:none) Schizosaccharomyces pombe mRNA for Ubc... 59 4e-07
(P52492) RecName: Full=Ubiquitin-conjugating enzyme E2-18 kDa; ... 59 4e-07
AC117072_66(AC117072|pid:none) Dictyostelium discoideum chromoso... 59 4e-07
BT063635_1(BT063635|pid:none) Zea mays full-length cDNA clone ZM... 59 4e-07
(Q58FS2) RecName: Full=Ubiquitin-conjugating enzyme E2 2; ... 59 5e-07
DQ311426_1(DQ311426|pid:none) Bombyx mori ubiquitin conjugating ... 59 5e-07
BT044917_1(BT044917|pid:none) Salmo salar clone ssal-rgf-507-097... 59 5e-07
BC047985_1(BC047985|pid:none) Xenopus laevis ubiquitin-conjugati... 59 5e-07
BT074286_1(BT074286|pid:none) Oncorhynchus mykiss clone omyk-evo... 59 5e-07
BT081476_1(BT081476|pid:none) Rana catesbeiana clone rcat-evr-51... 59 5e-07
AM920437_1408(AM920437|pid:none) Penicillium chrysogenum Wiscons... 59 5e-07
AC122726_25(AC122726|pid:none) Medicago truncatula clone mth2-23... 59 5e-07
BC076753_1(BC076753|pid:none) Xenopus laevis MGC82328 protein, m... 59 5e-07
BT071650_1(BT071650|pid:none) Picea sitchensis clone WS0294_N24 ... 59 5e-07
AJ843121_1(AJ843121|pid:none) Plantago major mRNA for Ubiquitin-... 58 7e-07
FN373925_1(FN373925|pid:none) Schistosoma mansoni genome sequenc... 58 7e-07
CP001574_322(CP001574|pid:none) Micromonas sp. RCC299 chromosome... 58 7e-07
BC044173_1(BC044173|pid:none) Danio rerio zgc:55452, mRNA (cDNA ... 58 7e-07
BT073899_1(BT073899|pid:none) Oncorhynchus mykiss clone omyk-evo... 58 7e-07
CP000584_457(CP000584|pid:none) Ostreococcus lucimarinus CCE9901... 58 7e-07
(O00103) RecName: Full=Ubiquitin-conjugating enzyme E2-20 kDa; ... 58 7e-07
AB026055_1(AB026055|pid:none) Nicotiana tabacum Ntubc1 mRNA for ... 58 7e-07
CU928180_286(CU928180|pid:none) Kluyveromyces thermotolerans str... 58 7e-07
AY814405_1(AY814405|pid:none) Schistosoma japonicum SJCHGC06418 ... 58 7e-07
AK223064_1(AK223064|pid:none) Homo sapiens mRNA for ubiquitin-co... 58 7e-07
BT043572_1(BT043572|pid:none) Salmo salar clone HM4_2469 ubiquit... 58 7e-07
CR954205_509(CR954205|pid:none) Ostreococcus tauri strain OTTH05... 58 7e-07
AK136186_1(AK136186|pid:none) Mus musculus in vitro fertilized e... 58 9e-07
(Q17QG5) RecName: Full=Ubiquitin-conjugating enzyme E2 G2; ... 58 9e-07
(Q4WLA7) RecName: Full=Ubiquitin-conjugating enzyme E2 2; ... 58 9e-07
BT081849_1(BT081849|pid:none) Rana catesbeiana clone rcat-evr-52... 58 9e-07
EU964992_1(EU964992|pid:none) Zea mays clone 283008 ubiquitin-co... 58 9e-07
AF262934_1(AF262934|pid:none) Avicennia marina ubiquitin conjuga... 58 9e-07
BC076537_1(BC076537|pid:none) Danio rerio zgc:91847, mRNA (cDNA ... 58 9e-07
BT083349_1(BT083349|pid:none) Anoplopoma fimbria clone afim-evh-... 58 9e-07
AY892462_1(AY892462|pid:none) Synthetic construct Homo sapiens c... 58 9e-07
AL591127_9(AL591127|pid:none) Mouse DNA sequence from clone RP23... 58 9e-07
EU964354_1(EU964354|pid:none) Zea mays clone 278181 ubiquitin-co... 58 9e-07
(Q96UP5) RecName: Full=Ubiquitin-conjugating enzyme E2 2; ... 58 9e-07
AE014296_2283(AE014296|pid:none) Drosophila melanogaster chromos... 58 9e-07
AK342573_1(AK342573|pid:none) Acyrthosiphon pisum ACYPI004996 mR... 58 9e-07
(Q9D1C1) RecName: Full=Ubiquitin-conjugating enzyme E2 C; ... 58 9e-07
EF576159_1(EF576159|pid:none) Oryza sativa (indica cultivar-grou... 58 9e-07
DQ067322_1(DQ067322|pid:none) Caenorhabditis remanei strain EM46... 57 1e-06
AK163966_1(AK163966|pid:none) Mus musculus ES cells cDNA, RIKEN ... 57 1e-06
EU284823_1(EU284823|pid:none) TSA: Elaeis guineensis EgEfMPOB000... 57 1e-06
NRL(1AAK) Ubiquitin conjugating enzyme (EC 6.3.2.19) - Arabidopsis 57 1e-06
(P25865) RecName: Full=Ubiquitin-conjugating enzyme E2 1; ... 57 1e-06
AM270182_7(AM270182|pid:none) Aspergillus niger contig An08c0270... 57 1e-06
(Q9C8X7) RecName: Full=Probable ubiquitin carrier protein E2 31;... 57 1e-06
BT034341_1(BT034341|pid:none) Zea mays full-length cDNA clone ZM... 57 1e-06
EF083334_1(EF083334|pid:none) Picea sitchensis clone WS02724_H13... 57 1e-06
EF144613_1(EF144613|pid:none) Populus trichocarpa clone WS01111_... 57 1e-06
DQ294271_1(DQ294271|pid:none) Solanum tuberosum clone 147C03 ubi... 57 1e-06
U15971_1(U15971|pid:none) Oryza sativa ubiquitin conjugating enz... 57 2e-06
BT063816_1(BT063816|pid:none) Zea mays full-length cDNA clone ZM... 57 2e-06
CP000585_249(CP000585|pid:none) Ostreococcus lucimarinus CCE9901... 57 2e-06
BT036396_1(BT036396|pid:none) Zea mays full-length cDNA clone ZM... 57 2e-06
CR954205_263(CR954205|pid:none) Ostreococcus tauri strain OTTH05... 57 2e-06
AK341282_1(AK341282|pid:none) Acyrthosiphon pisum ACYPI000069 mR... 57 2e-06
AK070524_1(AK070524|pid:none) Oryza sativa Japonica Group cDNA c... 57 2e-06
AM502242_152(AM502242|pid:none) Leishmania infantum chromosome 24. 57 2e-06
AF032456_1(AF032456|pid:none) Homo sapiens ubiquitin conjugating... 57 2e-06
EU244430_1(EU244430|pid:none) Capra hircus huntingtin interactin... 57 2e-06
(Q4PFA5) RecName: Full=Ubiquitin-conjugating enzyme E2 2; ... 57 2e-06
CU640366_966(CU640366|pid:none) Podospora anserina genomic DNA c... 57 2e-06
CR548612_215(CR548612|pid:none) Paramecium tetraurelia macronucl... 57 2e-06
BC124718_1(BC124718|pid:none) Danio rerio zgc:153687, mRNA (cDNA... 57 2e-06
(P0C8G4) RecName: Full=Ubiquitin-conjugating enzyme E2; ... 57 2e-06
AK112003_1(AK112003|pid:none) Oryza sativa Japonica Group cDNA c... 57 2e-06
AM494961_221(AM494961|pid:none) Leishmania braziliensis chromoso... 57 2e-06
AB079798_1(AB079798|pid:none) Oryza sativa Japonica Group OsRad6... 56 3e-06
BT076412_1(BT076412|pid:none) Caligus rogercresseyi clone crog-e... 56 3e-06
AK166647_1(AK166647|pid:none) Mus musculus 1 cell embryo 1 cell ... 56 3e-06
(Q4R5Y8) RecName: Full=Ubiquitin-conjugating enzyme E2 G1; ... 56 3e-06
AB011081_1(AB011081|pid:none) Mus musculus mRNA for huntingtin i... 56 3e-06
U67838_1(U67838|pid:none) Dictyostelium discoideum putative ubiq... 56 3e-06
(Q9NPD8) RecName: Full=Ubiquitin-conjugating enzyme E2 T; ... 56 3e-06
CU278516_1(CU278516|pid:none) Zebrafish DNA sequence from clone ... 56 3e-06
AJ720771_1(AJ720771|pid:none) Gallus gallus mRNA for hypothetica... 56 3e-06
BT048926_1(BT048926|pid:none) Salmo salar clone ssal-evd-504-092... 56 3e-06
BT073663_1(BT073663|pid:none) Oncorhynchus mykiss clone omyk-evn... 56 3e-06
L00641_1(L00641|pid:none) Arabidopsis thaliana ubiquitin conjuga... 56 3e-06
BC086816_1(BC086816|pid:none) Danio rerio ubiquitin-conjugating ... 56 3e-06
BT045267_1(BT045267|pid:none) Salmo salar clone ssal-rgf-517-009... 56 3e-06
BT081539_1(BT081539|pid:none) Rana catesbeiana clone rcat-evr-53... 56 3e-06
BT043711_1(BT043711|pid:none) Salmo salar clone HM5_2704 ubiquit... 56 3e-06
CP000587_13(CP000587|pid:none) Ostreococcus lucimarinus CCE9901 ... 56 3e-06
AY048267_1(AY048267|pid:none) Arabidopsis thaliana AT5g62540/K19... 55 5e-06
AK341491_1(AK341491|pid:none) Acyrthosiphon pisum ACYPI008318 mR... 55 5e-06
(P49427) RecName: Full=Ubiquitin-conjugating enzyme E2 R1; ... 55 5e-06

>FN318185_1(FN318185|pid:none) Schistosoma japonicum isolate Anhui
full length mRNA clone SJFCE2344.002|FSE_168_27_C04,
complete sequence.
Length = 562

Score = 221 bits (562), Expect = 6e-56
Identities = 102/156 (65%), Positives = 125/156 (80%)
Frame = +3

Query: 81 NPNNPAVKRILREIQELRNDTNPDYKAFPLEDNIFEWHFTIRGPQDSDFNGGIYHGRIIL 260
N NPAVKR+++E QEL T Y A PLEDN+FEWHFTIRGP+DSDF GG+YHGRI+L
Sbjct: 6 NSRNPAVKRLMKEAQELSAPTEL-YFAKPLEDNLFEWHFTIRGPEDSDFQGGVYHGRILL 64

Query: 261 PSEYPFKPPNIVLLTPNGRFETNVKICLTVSAHHPEHWQPSWSIRTVLVALIGFMPTEGK 440
PSEYP KPPNIVLLTPNGRFET+ KICL++S +HPE W+PSWSIRT L+ALIGFMPT G
Sbjct: 65 PSEYPMKPPNIVLLTPNGRFETHRKICLSISGYHPESWRPSWSIRTALLALIGFMPTHGV 124

Query: 441 GAIGAIDLPTKDRKELALKSLDWKCTRCGSHNRFAL 548
GAIG+++ P ++R+ LA KS + C+ CG ++ L
Sbjct: 125 GAIGSLNQPKEERQLLAFKSQSYVCSTCGPTSKLLL 160

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,582,383,481
Number of extensions: 28243393
Number of successful extensions: 66891
Number of sequences better than 10.0: 1007
Number of HSP's gapped: 66704
Number of HSP's successfully gapped: 1009
Length of query: 454
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 322
Effective length of database: 623,955,076
Effective search space: 200913534472
Effective search space used: 200913534472
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.92 gvh: 0.31 alm: 0.22 top: 0.60 tms: 0.07 mit: 0.21 mip: 0.00
nuc: 0.04 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.01 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 1.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

20.0 %: cytoplasmic
20.0 %: nuclear
16.0 %: vesicles of secretory system
8.0 %: mitochondrial
8.0 %: Golgi
8.0 %: plasma membrane
8.0 %: endoplasmic reticulum
4.0 %: extracellular, including cell wall
4.0 %: cytoskeletal
4.0 %: vacuolar

>> prediction for Contig-U13346-1 is cyt

VS (DIR, S) 2
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 2
SL (DIR, L) 4
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 2
CH (FL, L) 1
CF (FL, S) 5
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0