Contig-U13331-1
Contig ID Contig-U13331-1
Contig update 2002.12.18
Contig sequence
>Contig-U13331-1 (Contig-U13331-1Q) /CSM_Contig/Contig-U13331-1Q.Seq.d
TAAAAATTCATCAATAAATAACAAATAAAAAAAAAAAATAATGGAAATTT
TAATTGGAGCAACAATTTTAGGTGGTGTTACTTATGCCTATAATTCATTC
AAAAGATATATTCCAGAAGGAGTTCATGCCGTTAAACCATTTTATCCAGA
AAAGTATGTGGGTAAATGGTATGAAATTGCACGTTTATACACATATTTTG
AAAAGGATTTGGATAAAATTACAGCAGAATATTCAATTAATAAAGATGGT
TCAATAACAGTGGTTAATAGTGGATACAATTATAAAAAGAAAAAGAGAGA
AAATGCAAAAGGTATTGCTTATTTTGTAAATGGCTCGGACGAAGGAATGC
TAAAAGTCTCTTTCTTTGGTCCATTTTATTCTGGCTACAATGTAATTGCA
ATTGATCCTGACTATAAATATGCTTTAATTGCTGGTCAAAGTTTTGATTA
CATGTGGATCCTTTCAAAAGAACCAACAATTCCAGAGAAAATTAAAAATT
CTTATTTAGAATTAGCAAAATCAGTTGGTTATGATATTACAAAATTAATT
TGGTCAAAACAAAATGAAAATGAAAATTAAAAATTAAAAATTAAAAATTA
AAAAAATTTAAAATTTTATTTTTATTTTTATAAAATTAAATTTAAAGATT
TAATTTTTTCTTCAATTTCTAAAACCAAATTAATACCAATATCTAATAAA
TCTTGATTAGTTGATTCAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAA

Gap no gap
Contig length 775
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 4190142
End point 4189421
Strand (PLUS/MINUS) MINUS
Number of clones 9
Number of EST 9
Link to clone list U13331
List of clone(s)

est1=SSM110E,1,776
est2=SSA142F,3,583
est3=SLD807F,23,204
est4=SSL885Z,95,758
est5=SSA392Z,136,733
est6=SSI181Z,160,745
est7=SSG648Z,163,747
est8=SSH207Z,237,734
est9=SSH673Z,440,712
Translated Amino Acid sequence
knssinnk*KKKIMEILIGATILGGVTYAYNSFKRYIPEGVHAVKPFYPEKYVGKWYEIA
RLYTYFEKDLDKITAEYSINKDGSITVVNSGYNYKKKKRENAKGIAYFVNGSDEGMLKVS
FFGPFYSGYNVIAIDPDYKYALIAGQSFDYMWILSKEPTIPEKIKNSYLELAKSVGYDIT
KLIWSKQNENEN*klkikn*knlkfyfyfykikfkdlifssisktklipisnks*lvdsi
kkkkkkkkkkkkkkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
*kfink*qikkknngnfnwsnnfrwcylcl*fiqkiysrrsscr*tilsrkvcg*mv*nc
tfihif*kgfg*nysrifn**rwfnnsg**wiql*kekerkckryclfckwlgrrnaksl
flwsilfwlqcncn*s*l*icfncwskf*lhvdpfkrtnnsren*kflfriskiswl*yy
kinlvktk*k*klkikn*klkkfkilflfl*n*i*rfnfffnf*nqintni**ilis*fn
*kkkkkkkkkkkkkkkkk


Frame B:
knssinnk*KKKIMEILIGATILGGVTYAYNSFKRYIPEGVHAVKPFYPEKYVGKWYEIA
RLYTYFEKDLDKITAEYSINKDGSITVVNSGYNYKKKKRENAKGIAYFVNGSDEGMLKVS
FFGPFYSGYNVIAIDPDYKYALIAGQSFDYMWILSKEPTIPEKIKNSYLELAKSVGYDIT
KLIWSKQNENEN*klkikn*knlkfyfyfykikfkdlifssisktklipisnks*lvdsi
kkkkkkkkkkkkkkkkkk


Frame C:
kihq*itnkkkk*wkf*leqqf*vvllmpiihskdifqkefmplnhfiqksmwvngmklh
vythilkriwiklqqniqlikmvq*qwlivdtiikrkrekmqkvllil*martkec*ksl
slvhfilatm*lqliltinml*llvkvlitcgsfqknqqfqrklkili*n*qnqlvmilq
n*fgqnkmkmkikn*klkikki*nfififiklnlki*fflqflkpn*yqylinld*liql
kkkkkkkkkkkkkkkkk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U13331-1 (Contig-U13331-1Q)
/CSM_Contig/Contig-U13331-1Q.Seq.d
(775 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U13331-1 (Contig-U13331-1Q) /CSM_Contig/Conti... 490 e-138
Contig-U05424-1 (Contig-U05424-1Q) /CSM_Contig/Conti... 121 1e-27
Contig-U09509-1 (Contig-U09509-1Q) /CSM_Contig/Conti... 38 0.014
Contig-U00319-1 (Contig-U00319-1Q) /CSM_Contig/Conti... 38 0.014
Contig-U12007-1 (Contig-U12007-1Q) /CSM_Contig/Conti... 36 0.054
Contig-U14151-1 (Contig-U14151-1Q) /CSM_Contig/Conti... 34 0.22
Contig-U12146-1 (Contig-U12146-1Q) /CSM_Contig/Conti... 34 0.22
Contig-U10164-1 (Contig-U10164-1Q) /CSM_Contig/Conti... 34 0.22
Contig-U09928-1 (Contig-U09928-1Q) /CSM_Contig/Conti... 34 0.22
Contig-U06978-1 (Contig-U06978-1Q) /CSM_Contig/Conti... 34 0.22

>Contig-U13331-1 (Contig-U13331-1Q) /CSM_Contig/Contig-U13331-1Q.Seq.d
Length = 775

Score = 490 bits (247), Expect = e-138
Identities = 271/283 (95%)
Strand = Plus / Plus


Query: 1 taaaaattcatcaataaataacaaatnnnnnnnnnnnntaatggaaattttaattggagc 60
|||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 taaaaattcatcaataaataacaaataaaaaaaaaaaataatggaaattttaattggagc 60


Query: 61 aacaattttaggtggtgttacttatgcctataattcattcaaaagatatattccagaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aacaattttaggtggtgttacttatgcctataattcattcaaaagatatattccagaagg 120


Query: 121 agttcatgccgttaaaccattttatccagaaaagtatgtgggtaaatggtatgaaattgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agttcatgccgttaaaccattttatccagaaaagtatgtgggtaaatggtatgaaattgc 180


Query: 181 acgtttatacacatattttgaaaaggatttggataaaattacagcagaatattcaattaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acgtttatacacatattttgaaaaggatttggataaaattacagcagaatattcaattaa 240


Query: 241 taaagatggttcaataacagtggttaatagtggatacaattat 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taaagatggttcaataacagtggttaatagtggatacaattat 283


Score = 486 bits (245), Expect = e-137
Identities = 245/245 (100%)
Strand = Plus / Plus


Query: 311 ggtattgcttattttgtaaatggctcggacgaaggaatgctaaaagtctctttctttggt 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ggtattgcttattttgtaaatggctcggacgaaggaatgctaaaagtctctttctttggt 370


Query: 371 ccattttattctggctacaatgtaattgcaattgatcctgactataaatatgctttaatt 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ccattttattctggctacaatgtaattgcaattgatcctgactataaatatgctttaatt 430


Query: 431 gctggtcaaagttttgattacatgtggatcctttcaaaagaaccaacaattccagagaaa 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gctggtcaaagttttgattacatgtggatcctttcaaaagaaccaacaattccagagaaa 490


Query: 491 attaaaaattcttatttagaattagcaaaatcagttggttatgatattacaaaattaatt 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 attaaaaattcttatttagaattagcaaaatcagttggttatgatattacaaaattaatt 550


Query: 551 tggtc 555
|||||
Sbjct: 551 tggtc 555


Score = 123 bits (62), Expect = 3e-28
Identities = 62/62 (100%)
Strand = Plus / Plus


Query: 660 cttcaatttctaaaaccaaattaataccaatatctaataaatcttgattagttgattcaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 cttcaatttctaaaaccaaattaataccaatatctaataaatcttgattagttgattcaa 719


Query: 720 tt 721
||
Sbjct: 720 tt 721


>Contig-U05424-1 (Contig-U05424-1Q) /CSM_Contig/Contig-U05424-1Q.Seq.d
Length = 300

Score = 121 bits (61), Expect = 1e-27
Identities = 175/213 (82%)
Strand = Plus / Plus


Query: 341 gaaggaatgctaaaagtctctttctttggtccattttattctggctacaatgtaattgca 400
|||| |||| ||||||| || || ||||||||||||||| |||| |||||||| ||||||
Sbjct: 13 gaagcaatgttaaaagtttccttttttggtccattttatgctggttacaatgttattgca 72


Query: 401 attgatcctgactataaatatgctttaattgctggtcaaagttttgattacatgtggatc 460
||||||||||| ||||||||||| || |||| ||| |||||| ||||| | |||||
Sbjct: 73 attgatcctgattataaatatgcattggttgccggtagaagtttagattatttatggata 132


Query: 461 ctttcaaaagaaccaacaattccagagaaaattaaaaattcttatttagaattagcaaaa 520
|| |||| |||| | |||||||||| | |||||||| |||||||||||||| ||
Sbjct: 133 ctctcaagagaaacttcaattccagatcatattaaaaaacaatatttagaattagctgaa 192


Query: 521 tcagttggttatgatattacaaaattaatttgg 553
||| |||||||| ||| | ||||||||||||||
Sbjct: 193 tcaattggttataatacttcaaaattaatttgg 225


>Contig-U09509-1 (Contig-U09509-1Q) /CSM_Contig/Contig-U09509-1Q.Seq.d
Length = 906

Score = 38.2 bits (19), Expect = 0.014
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 231 attcaattaataaagatgg 249
|||||||||||||||||||
Sbjct: 316 attcaattaataaagatgg 334


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9955
Number of Sequences: 6905
Number of extensions: 9955
Number of successful extensions: 1052
Number of sequences better than 10.0: 97
length of query: 775
length of database: 5,674,871
effective HSP length: 16
effective length of query: 759
effective length of database: 5,564,391
effective search space: 4223372769
effective search space used: 4223372769
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.12. 7
Homology vs DNA
Query= Contig-U13331-1 (Contig-U13331-1Q) /CSM_Contig/Contig-U13331-1Q.Seq.d
(775 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(C24642) Dictyostelium discoideum slug cDNA, clone SL-X042. 486 0.0 3
(C89630) Dictyostelium discoideum slug cDNA, clone SSA392. 456 0.0 3
(AU038893) Dictyostelium discoideum slug cDNA, clone SSM110. 456 0.0 3
(C93939) Dictyostelium discoideum slug cDNA, clone SSL885. 432 0.0 4
(C89942) Dictyostelium discoideum slug cDNA, clone SSG648. 456 0.0 3
(C90174) Dictyostelium discoideum slug cDNA, clone SSI181. 456 0.0 3
(AU038052) Dictyostelium discoideum slug cDNA, clone SSH207. 456 e-153 3
(AU074801) Dictyostelium discoideum slug cDNA, clone SSM110. 400 e-116 2
(AU061348) Dictyostelium discoideum slug cDNA, clone SLD807. 329 9e-86 1
(AU038407) Dictyostelium discoideum slug cDNA, clone SSH673. 176 8e-40 1
(AU052706) Dictyostelium discoideum slug cDNA, clone SLD807. 157 7e-34 1
(AU073749) Dictyostelium discoideum slug cDNA, clone SSI267. 94 1e-18 2
(CP000685) Flavobacterium johnsoniae UW101, complete genome. 82 4e-11 1
(BH388415) AG-ND-144N13.TF ND-TAM Anopheles gambiae genomic ... 42 5e-04 2
(AC205928) Pongo abelii BAC clone CH276-262B5 from chromosom... 50 0.13 1
(DH417725) Oryzias latipes Fosmid clone:GOLWFno828_c14, reve... 48 0.49 1
(AC181571) Strongylocentrotus purpuratus clone R3-1109H4, WO... 40 0.69 2
(CU655894) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.0 1
(CU582777) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.0 1
(AC214102) Pongo abelii chromosome 1 clone CH276-16C1, WORKI... 46 2.0 1
(AC203527) Dasypus novemcinctus clone VMRC5-283G11, WORKING ... 46 2.0 1
(DU184985) 1098553704875 CHORI-243 Ovis aries genomic clone ... 46 2.0 1
(CZ933002) 250159 Tomato EcoRI BAC Library Solanum lycopersi... 46 2.0 1
(DN783588) 92317449 Sea Urchin primary mesenchyme cell cDNA ... 46 2.0 1
(BW686350) Solanum lycopersicum cDNA, clone: FC05DD02, 5' en... 46 2.0 1
(CP000033) Lactobacillus acidophilus NCFM, complete genome. 46 2.0 1
(AM286415) Yersinia enterocolitica subsp. enterocolitica 808... 46 2.0 1
(EL365018) CCEM9537.b1_B10.ab1 CCE(LMS) endive Cichorium end... 38 4.4 2
(EJ864892) 1093018268807 Global-Ocean-Sampling_GS-30-02-01-1... 36 5.0 2
(AY192161) Homo sapiens plasminogen (PLG) gene, complete cds. 34 5.2 3
(AY644518) Bos taurus T cell receptor gamma cluster 2 (TCRG2... 38 5.4 4
(CC281358) CH261-167E17_RM1.1 CH261 Gallus gallus genomic cl... 38 5.6 2
(EA333158) Sequence 5650 from patent US 7306913. 34 6.6 3
(AF114449) Tapinella panuoides ATP synthase subunit 6 (atp6)... 44 7.7 1
(CQ436567) Sequence 2327 from Patent WO0192523. 44 7.7 1
(AX145255) Sequence 3977 from Patent WO0134809. 44 7.7 1
(AX144817) Sequence 3539 from Patent WO0134809. 44 7.7 1
(AR921732) Sequence 2369 from patent US 7090973. 44 7.7 1
(AR485891) Sequence 3977 from patent US 6703492. 44 7.7 1
(AR485453) Sequence 3539 from patent US 6703492. 44 7.7 1
(AP006543) Homo sapiens genomic DNA, chromosome 8p12, clone:... 44 7.7 1
(AC145110) Homo sapiens chromosome 8, clone WI2-80720H9, com... 44 7.7 1
(AC024563) Homo sapiens chromosome 19 clone CTC-451A6, compl... 44 7.7 1
(AC008626) Homo sapiens chromosome 19 clone CTB-159G17, comp... 44 7.7 1
(AC145111) Homo sapiens chromosome 8 clone XXfos-801968A2 ma... 44 7.7 1
(AC103493) Rattus norvegicus clone CH230-31C2, WORKING DRAFT... 44 7.7 1
(AC231608) Homo sapiens chromosome 8 clone ABC8-5694649G24, ... 44 7.7 1
(AC010318) Homo sapiens chromosome 19 clone CTB-93M21, WORKI... 44 7.7 1
(BH178860) 012_L_08-rev SmBAC1 Schistosoma mansoni genomic c... 44 7.7 1
(ER363926) 1093018939267 Global-Ocean-Sampling_GS-34-01-01-1... 44 7.7 1
(EK390400) 1095469500173 Global-Ocean-Sampling_GS-31-01-01-1... 44 7.7 1
(EK062491) 1092960097275 Global-Ocean-Sampling_GS-31-01-01-1... 44 7.7 1
(AL615816) T3 end of clone 012DF04 of library SmBAC1 from st... 44 7.7 1
(EJ546252) 1092956091697 Global-Ocean-Sampling_GS-29-01-01-1... 44 7.7 1
(EJ056714) 1095456032575 Global-Ocean-Sampling_GS-26-01-01-1... 44 7.7 1
(EI732049) CHORI51415M14TR BAC library from the primary brea... 44 7.7 1
(DU997832) OG_ABa0129B10.r OG_ABa Oryza granulata genomic cl... 44 7.7 1
(DU894240) 396868 Tomato HindIII BAC Library Solanum lycoper... 44 7.7 1
(DH622939) Rattus norvegicus DNA, BAC clone: RNB1-156G05, 3'... 44 7.7 1
(CC149914) NDL.40P4.SP6 Notre Dame Liverpool Aedes aegypti g... 44 7.7 1
(CC127890) NDL.31O6.T7 Notre Dame Liverpool Aedes aegypti ge... 44 7.7 1
(CC126588) NDL.92P8.T7 Notre Dame Liverpool Aedes aegypti ge... 44 7.7 1
(CC113973) NDL.7I23.T7 Notre Dame Liverpool Aedes aegypti ge... 44 7.7 1
(CC101589) CSU-K34.114C2.T7 CSU-K34 Aedes aegypti genomic cl... 44 7.7 1
(BZ029698) oef79b11.b1 B.oleracea002 Brassica oleracea genom... 44 7.7 1
(BX245325) Danio rerio genomic clone DKEY-234B3, genomic sur... 44 7.7 1
(EY804842) CR05-C3-702-053-H01-CT.F Mandarin fruit, developm... 44 7.7 1
(AP006841) Bacteroides fragilis YCH46 DNA, complete genome. 44 7.7 1
(AF269937) Staphylococcus epidermidis strain SR1 clone step.... 44 7.7 1
(AF269497) Staphylococcus epidermidis strain SR1 clone step.... 44 7.7 1
(BC077799) Xenopus laevis MGC80409 protein, mRNA (cDNA clone... 42 9.9 2

>(C24642) Dictyostelium discoideum slug cDNA, clone SL-X042.
Length = 581

Score = 486 bits (245), Expect(3) = 0.0
Identities = 245/245 (100%)
Strand = Plus / Plus


Query: 39 taatggaaattttaattggagcaacaattttaggtggtgttacttatgcctataattcat 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 taatggaaattttaattggagcaacaattttaggtggtgttacttatgcctataattcat 96


Query: 99 tcaaaagatatattccagaaggagttcatgccgttaaaccattttatccagaaaagtatg 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 tcaaaagatatattccagaaggagttcatgccgttaaaccattttatccagaaaagtatg 156


Query: 159 tgggtaaatggtatgaaattgcacgtttatacacatattttgaaaaggatttggataaaa 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 tgggtaaatggtatgaaattgcacgtttatacacatattttgaaaaggatttggataaaa 216


Query: 219 ttacagcagaatattcaattaataaagatggttcaataacagtggttaatagtggataca 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 ttacagcagaatattcaattaataaagatggttcaataacagtggttaatagtggataca 276


Query: 279 attat 283
|||||
Sbjct: 277 attat 281

Score = 456 bits (230), Expect(3) = 0.0
Identities = 230/230 (100%)
Strand = Plus / Plus


Query: 311 ggtattgcttattttgtaaatggctcggacgaaggaatgctaaaagtctctttctttggt 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ggtattgcttattttgtaaatggctcggacgaaggaatgctaaaagtctctttctttggt 368


Query: 371 ccattttattctggctacaatgtaattgcaattgatcctgactataaatatgctttaatt 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ccattttattctggctacaatgtaattgcaattgatcctgactataaatatgctttaatt 428


Query: 431 gctggtcaaagttttgattacatgtggatcctttcaaaagaaccaacaattccagagaaa 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gctggtcaaagttttgattacatgtggatcctttcaaaagaaccaacaattccagagaaa 488


Query: 491 attaaaaattcttatttagaattagcaaaatcagttggttatgatattac 540
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 attaaaaattcttatttagaattagcaaaatcagttggttatgatattac 538

Score = 48.1 bits (24), Expect(3) = 0.0
Identities = 24/24 (100%)
Strand = Plus / Plus


Query: 3 aaaattcatcaataaataacaaat 26
||||||||||||||||||||||||
Sbjct: 1 aaaattcatcaataaataacaaat 24

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 694,522,930
Number of extensions: 42860046
Number of successful extensions: 3527310
Number of sequences better than 10.0: 72
Length of query: 775
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 751
Effective length of database: 97,308,875,965
Effective search space: 73078965849715
Effective search space used: 73078965849715
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7. 6
Homology vs Protein
Query= Contig-U13331-1 (Contig-U13331-1Q) /CSM_Contig/Contig-U13331-1Q.Seq.d
(775 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

CP000685_2124(CP000685|pid:none) Flavobacterium johnsoniae UW101... 192 1e-47
CP000964_4805(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 169 1e-40
AP006725_609(AP006725|pid:none) Klebsiella pneumoniae NTUH-K2044... 169 1e-40
CP000937_646(CP000937|pid:none) Francisella philomiragia subsp. ... 165 1e-39
CP000653_65(CP000653|pid:none) Enterobacter sp. 638, complete ge... 165 1e-39
AE014613_4097(AE014613|pid:none) Salmonella enterica subsp. ente... 164 2e-39
AE006468_4199(AE006468|pid:none) Salmonella enterica subsp. ente... 164 3e-39
CP000880_3173(CP000880|pid:none) Salmonella enterica subsp. ariz... 163 7e-39
AM933172_4078(AM933172|pid:none) Salmonella enterica subsp. ente... 163 7e-39
AB365867_2(AB365867|pid:none) Salmonella enterica subsp. enteric... 162 1e-38
(Q46036) RecName: Full=Outer membrane lipoprotein blc; Flags: Pr... 161 2e-38
CP000857_4346(CP000857|pid:none) Salmonella enterica subsp. ente... 160 3e-38
AM933173_4038(AM933173|pid:none) Salmonella enterica subsp. ente... 160 3e-38
DQ995355_3(DQ995355|pid:none) Escherichia coli plasmid pMG828-5,... 160 3e-38
FP236842_483(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/96... 160 3e-38
CP000653_336(CP000653|pid:none) Enterobacter sp. 638, complete g... 160 6e-38
CP000034_4045(CP000034|pid:none) Shigella dysenteriae Sd197, com... 159 7e-38
CP000247_4349(CP000247|pid:none) Escherichia coli 536, complete ... 159 9e-38
AE014075_5128(AE014075|pid:none) Escherichia coli CFT073, comple... 159 1e-37
AY339625_5(AY339625|pid:none) Escherichia coli plasmid p541, ins... 159 1e-37
CU468135_2978(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 158 2e-37
(P0A901) RecName: Full=Outer membrane lipoprotein blc; Flags: Pr... 157 3e-37
AE005674_4309(AE005674|pid:none) Shigella flexneri 2a str. 301, ... 157 3e-37
AM286415_345(AM286415|pid:none) Yersinia enterocolitica subsp. e... 156 6e-37
DQ017661_13(DQ017661|pid:none) Salmonella enterica plasmid pNF13... 155 1e-36
CP000915_1326(CP000915|pid:none) Francisella tularensis subsp. m... 155 2e-36
CP000891_1528(CP000891|pid:none) Shewanella baltica OS195, compl... 155 2e-36
CP000446_2574(CP000446|pid:none) Shewanella sp. MR-4, complete g... 154 2e-36
CP000681_1400(CP000681|pid:none) Shewanella putrefaciens CN-32, ... 154 4e-36
CP000563_1488(CP000563|pid:none) Shewanella baltica OS155, compl... 153 7e-36
AF025662_6(AF025662|pid:none) Vibrio cholerae lipoprotein (vlpA)... 153 7e-36
CP000783_156(CP000783|pid:none) Enterobacter sakazakii ATCC BAA-... 152 1e-35
AE003853_344(AE003853|pid:none) Vibrio cholerae O1 biovar eltor ... 152 1e-35
CR954247_44(CR954247|pid:none) Pseudoalteromonas haloplanktis st... 152 1e-35
(Q08790) RecName: Full=Outer membrane lipoprotein blc; AltName: ... 152 2e-35
AE003853_311(AE003853|pid:none) Vibrio cholerae O1 biovar eltor ... 152 2e-35
CP000626_863(CP000626|pid:none) Vibrio cholerae O395 chromosome ... 151 2e-35
CP000753_1478(CP000753|pid:none) Shewanella baltica OS185, compl... 151 3e-35
AE003853_435(AE003853|pid:none) Vibrio cholerae O1 biovar eltor ... 150 4e-35
BA000038_318(BA000038|pid:none) Vibrio vulnificus YJ016 DNA, chr... 149 1e-34
CP000647_4479(CP000647|pid:none) Klebsiella pneumoniae subsp. pn... 149 1e-34
CP001103_679(CP001103|pid:none) Alteromonas macleodii 'Deep ecot... 146 6e-34
FM954972_2002(FM954972|pid:none) Vibrio splendidus LGP32 chromos... 145 1e-33
CP000252_2075(CP000252|pid:none) Syntrophus aciditrophicus SB, c... 145 2e-33
CP000644_207(CP000644|pid:none) Aeromonas salmonicida subsp. sal... 144 2e-33
CP000759_80(CP000759|pid:none) Ochrobactrum anthropi ATCC 49188 ... 144 4e-33
CP000388_576(CP000388|pid:none) Pseudoalteromonas atlantica T6c,... 144 4e-33
CP001616_1064(CP001616|pid:none) Tolumonas auensis DSM 9187, com... 143 5e-33
CP000083_2116(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 143 5e-33
CP001133_964(CP001133|pid:none) Vibrio fischeri MJ11 chromosome ... 141 2e-32
CP000514_21(CP000514|pid:none) Marinobacter aquaeolei VT8, compl... 141 3e-32
BA000032_1018(BA000032|pid:none) Vibrio parahaemolyticus RIMD 22... 139 1e-31
AE006470_1798(AE006470|pid:none) Chlorobium tepidum TLS, complet... 139 1e-31
AE016825_3230(AE016825|pid:none) Chromobacterium violaceum ATCC ... 138 2e-31
CP000109_1988(CP000109|pid:none) Thiomicrospira crunogena XCL-2,... 137 3e-31
CP000472_3793(CP000472|pid:none) Shewanella piezotolerans WP3, c... 134 3e-30
AM167904_353(AM167904|pid:none) Bordetella avium 197N complete g... 134 4e-30
CP000510_3368(CP000510|pid:none) Psychromonas ingrahamii 37, com... 133 7e-30
CP001097_618(CP001097|pid:none) Chlorobium limicola DSM 245, com... 132 2e-29
CP000884_2968(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 132 2e-29
CP001099_1638(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,... 132 2e-29
CP000607_509(CP000607|pid:none) Chlorobium phaeovibrioides DSM 2... 131 2e-29
CR522870_2154(CR522870|pid:none) Desulfotalea psychrophila LSv54... 131 3e-29
CP001101_1717(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 130 4e-29
CP001392_2348(CP001392|pid:none) Diaphorobacter sp. TPSY, comple... 130 5e-29
CP001108_1619(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 128 2e-28
CP000492_672(CP000492|pid:none) Chlorobium phaeobacteroides DSM ... 127 5e-28
CP000096_465(CP000096|pid:none) Pelodictyon luteolum DSM 273, co... 126 9e-28
CR626927_2849(CR626927|pid:none) Bacteroides fragilis NCTC 9343,... 125 2e-27
AP006841_3093(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 124 3e-27
CP000103_1774(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 121 3e-26
CP000361_805(CP000361|pid:none) Arcobacter butzleri RM4018, comp... 117 4e-25
CP000482_2177(CP000482|pid:none) Pelobacter propionicus DSM 2379... 111 3e-23
CP000140_118(CP000140|pid:none) Parabacteroides distasonis ATCC ... 109 9e-23
CP001172_1212(CP001172|pid:none) Acinetobacter baumannii AB307-0... 108 2e-22
AE017340_1978(AE017340|pid:none) Idiomarina loihiensis L2TR, com... 107 3e-22
CR543861_1485(CR543861|pid:none) Acinetobacter sp. ADP1 complete... 107 3e-22
AE015928_4491(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 107 3e-22
CP001071_1155(CP001071|pid:none) Akkermansia muciniphila ATCC BA... 106 9e-22
CP000140_2109(CP000140|pid:none) Parabacteroides distasonis ATCC... 105 2e-21
AC151459_11(AC151459|pid:none) Medicago truncatula clone mth2-6e... 103 5e-21
CP000271_1640(CP000271|pid:none) Burkholderia xenovorans LB400 c... 101 2e-20
BT071419_1(BT071419|pid:none) Picea sitchensis clone WS0289_J21 ... 100 4e-20
EU284955_1(EU284955|pid:none) TSA: Elaeis guineensis EgEfMPOB001... 99 1e-19
AY568589_1(AY568589|pid:none) Capsicum annuum lipocalin protein ... 98 3e-19
BX640435_237(BX640435|pid:none) Bordetella parapertussis strain ... 97 4e-19
DQ222997_1(DQ222997|pid:none) Prunus persica temperature-induced... 96 1e-18
EF083095_1(EF083095|pid:none) Picea sitchensis clone WS02719_O07... 96 1e-18
DQ222986_1(DQ222986|pid:none) Gossypium arboreum temperature-ind... 95 2e-18
CP001089_148(CP001089|pid:none) Geobacter lovleyi SZ, complete g... 95 2e-18
CR382138_4(CR382138|pid:none) Debaryomyces hansenii strain CBS76... 95 2e-18
DQ222988_1(DQ222988|pid:none) Lycopersicon esculentum temperatur... 95 3e-18
DQ222990_1(DQ222990|pid:none) Glycine max temperature-induced li... 94 5e-18
DQ222992_1(DQ222992|pid:none) Pinus taeda temperature-induced li... 93 1e-17
EF148421_1(EF148421|pid:none) Populus trichocarpa x Populus delt... 92 1e-17
EF148398_1(EF148398|pid:none) Populus trichocarpa x Populus delt... 92 2e-17
AC151459_12(AC151459|pid:none) Medicago truncatula clone mth2-6e... 92 2e-17
DQ222987_1(DQ222987|pid:none) Populus balsamifera temperature-in... 92 2e-17
DQ222982_1(DQ222982|pid:none) Glycine max temperature-induced li... 91 3e-17
CP000116_1196(CP000116|pid:none) Thiobacillus denitrificans ATCC... 91 4e-17
CP000521_2756(CP000521|pid:none) Acinetobacter baumannii ATCC 17... 91 4e-17
BT040799_1(BT040799|pid:none) Zea mays full-length cDNA clone ZM... 91 4e-17
DQ223001_1(DQ223001|pid:none) Citrus sinensis temperature-induce... 91 5e-17
CP001340_3590(CP001340|pid:none) Caulobacter crescentus NA1000, ... 91 5e-17
AE005673_3452(AE005673|pid:none) Caulobacter crescentus CB15, co... 91 5e-17
AY085685_1(AY085685|pid:none) Arabidopsis thaliana clone 17098 m... 90 7e-17
AB024029_6(AB024029|pid:none) Arabidopsis thaliana genomic DNA, ... 90 7e-17
DQ222985_1(DQ222985|pid:none) Mesembryanthemum crystallinum temp... 89 2e-16
DQ223000_1(DQ223000|pid:none) Gossypium arboreum temperature-ind... 89 2e-16
CU468230_907(CU468230|pid:none) Acinetobacter baumannii str. SDF... 89 2e-16
DQ222999_1(DQ222999|pid:none) Mesembryanthemum crystallinum temp... 89 2e-16
CP000158_2360(CP000158|pid:none) Hyphomonas neptunium ATCC 15444... 88 3e-16
AK068551_1(AK068551|pid:none) Oryza sativa Japonica Group cDNA c... 87 5e-16
EU963959_1(EU963959|pid:none) Zea mays clone 274570 unknown mRNA. 87 6e-16
BT039468_1(BT039468|pid:none) Zea mays full-length cDNA clone ZM... 87 8e-16
CP000142_2174(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 86 1e-15
CP000616_443(CP000616|pid:none) Burkholderia vietnamiensis G4 ch... 86 1e-15
CP000712_1782(CP000712|pid:none) Pseudomonas putida F1, complete... 86 2e-15
AP009387_336(AP009387|pid:none) Burkholderia multivorans ATCC 17... 85 2e-15
BX842650_234(BX842650|pid:none) Bdellovibrio bacteriovorus compl... 85 3e-15
DQ222980_1(DQ222980|pid:none) Sorghum bicolor temperature-induce... 84 5e-15
AY077702_1(AY077702|pid:none) Triticum aestivum temperature stre... 84 7e-15
CP000094_356(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, c... 84 7e-15
AM459918_1(AM459918|pid:none) Vitis vinifera contig VV78X056834.... 84 7e-15
AK071108_1(AK071108|pid:none) Oryza sativa Japonica Group cDNA c... 82 1e-14
CP001111_2770(CP001111|pid:none) Stenotrophomonas maltophilia R5... 82 1e-14
CP000626_873(CP000626|pid:none) Vibrio cholerae O395 chromosome ... 82 2e-14
CP000269_3637(CP000269|pid:none) Janthinobacterium sp. Marseille... 82 2e-14
BA000012_3628(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 81 3e-14
EU219534_110(EU219534|pid:none) Salmonella enterica subsp. enter... 81 4e-14
BA000012_4460(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 80 6e-14
AM286690_869(AM286690|pid:none) Alcanivorax borkumensis SK2, com... 80 6e-14
AM039952_4048(AM039952|pid:none) Xanthomonas campestris pv. vesi... 80 7e-14
CU207211_3241(CU207211|pid:none) Herminiimonas arsenicoxydans ch... 80 9e-14
CP000438_5422(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 80 9e-14
AE008923_3901(AE008923|pid:none) Xanthomonas axonopodis pv. citr... 79 1e-13
CP000492_1267(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 79 2e-13
FM209186_5497(FM209186|pid:none) Pseudomonas aeruginosa LESB58 c... 78 4e-13
CP001281_2282(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 77 6e-13
AE008922_2388(AE008922|pid:none) Xanthomonas campestris pv. camp... 77 6e-13
CP001097_1197(CP001097|pid:none) Chlorobium limicola DSM 245, co... 76 1e-12
CP000744_5763(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 75 2e-12
DQ222991_1(DQ222991|pid:none) Physcomitrella patens temperature-... 75 2e-12
CP001101_1285(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 75 2e-12
AP008229_3003(AP008229|pid:none) Xanthomonas oryzae pv. oryzae M... 74 4e-12
AE008923_2519(AE008923|pid:none) Xanthomonas axonopodis pv. citr... 74 4e-12
AM039952_2760(AM039952|pid:none) Xanthomonas campestris pv. vesi... 74 5e-12
CP000580_1175(CP000580|pid:none) Mycobacterium sp. JLS, complete... 74 5e-12
CP001111_3754(CP001111|pid:none) Stenotrophomonas maltophilia R5... 74 7e-12
AE015451_4968(AE015451|pid:none) Pseudomonas putida KT2440 compl... 73 9e-12
CP000323_1678(CP000323|pid:none) Psychrobacter cryohalolentis K5... 73 9e-12
AM743169_4117(AM743169|pid:none) Stenotrophomonas maltophilia K2... 72 2e-11
CP000932_334(CP000932|pid:none) Campylobacter lari RM2100, compl... 72 2e-11
CP000384_1148(CP000384|pid:none) Mycobacterium sp. MCS, complete... 72 2e-11
CP001157_4406(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 71 3e-11
CP001053_2994(CP001053|pid:none) Burkholderia phytofirmans PsJN ... 71 4e-11
CP000949_426(CP000949|pid:none) Pseudomonas putida W619, complet... 69 1e-10
CP000511_1479(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 69 2e-10
DQ465391_1(DQ465391|pid:none) Oreochromis mossambicus clone SSH ... 67 5e-10
CP001013_41(CP001013|pid:none) Leptothrix cholodnii SP-6, comple... 67 5e-10
CP000271_2778(CP000271|pid:none) Burkholderia xenovorans LB400 c... 67 6e-10
CP000926_5055(CP000926|pid:none) Pseudomonas putida GB-1, comple... 67 8e-10
CP000870_497(CP000870|pid:none) Burkholderia multivorans ATCC 17... 65 2e-09
AP009387_333(AP009387|pid:none) Burkholderia multivorans ATCC 17... 65 2e-09
AE006470_1086(AE006470|pid:none) Chlorobium tepidum TLS, complet... 65 2e-09
DQ223011_1(DQ223011|pid:none) Tortula ruralis temperature-induce... 65 2e-09
CP001504_820(CP001504|pid:none) Burkholderia glumae BGR1 chromos... 65 2e-09
CT573326_4735(CT573326|pid:none) Pseudomonas entomophila str. L4... 65 3e-09
AM902716_395(AM902716|pid:none) Bordetella petrii strain DSM 128... 63 1e-08
CP000555_3776(CP000555|pid:none) Methylibium petroleiphilum PM1,... 63 1e-08
CP000814_1443(CP000814|pid:none) Campylobacter jejuni subsp. jej... 62 2e-08
CP000529_1444(CP000529|pid:none) Polaromonas naphthalenivorans C... 61 3e-08
CP000150_60(CP000150|pid:none) Burkholderia sp. 383 chromosome 3... 60 1e-07
S49581(S49581) apolipoprotein D - mouse &X82648_1(X82648|pid:no... 60 1e-07
CP000377_2186(CP000377|pid:none) Silicibacter sp. TM1040, comple... 59 1e-07
AM039952_4365(AM039952|pid:none) Xanthomonas campestris pv. vesi... 57 5e-07
CP000264_3826(CP000264|pid:none) Jannaschia sp. CCS1, complete g... 57 7e-07
CP000361_1182(CP000361|pid:none) Arcobacter butzleri RM4018, com... 56 1e-06
(P23593) RecName: Full=Apolipoprotein D; Short=Apo-D; ... 55 2e-06
NRL(2APD) apolipoprotein D (theoretical model) - human 55 3e-06
AY893842_1(AY893842|pid:none) Synthetic construct Homo sapiens c... 55 3e-06
CP000270_2533(CP000270|pid:none) Burkholderia xenovorans LB400 c... 54 4e-06
AP008229_248(AP008229|pid:none) Xanthomonas oryzae pv. oryzae MA... 54 6e-06
(Q32KY0) RecName: Full=Apolipoprotein D; Short=Apo-D; ... 54 6e-06
CP000967_4854(CP000967|pid:none) Xanthomonas oryzae pv. oryzae P... 54 6e-06
AE013598_266(AE013598|pid:none) Xanthomonas oryzae pv. oryzae KA... 54 6e-06
CU633870_111(CU633870|pid:none) Podospora anserina genomic DNA c... 54 6e-06
AE008922_4067(AE008922|pid:none) Xanthomonas campestris pv. camp... 53 1e-05
DQ239921_1(DQ239921|pid:none) Cervus elaphus apolipoprotein D (A... 53 1e-05
CP001053_1523(CP001053|pid:none) Burkholderia phytofirmans PsJN ... 52 2e-05
CP001504_1718(CP001504|pid:none) Burkholderia glumae BGR1 chromo... 52 2e-05
AY264809_1(AY264809|pid:none) Branchiostoma belcheri tsingtauens... 51 4e-05
AX742858_1(AX742858|pid:none) Sequence 12 from Patent WO03029471... 50 8e-05
(P37153) RecName: Full=Apolipoprotein D; Short=Apo-D; ... 48 3e-04
CP000927_140(CP000927|pid:none) Caulobacter sp. K31, complete ge... 48 3e-04
CP000532_127(CP000532|pid:none) Polaromonas naphthalenivorans CJ... 47 9e-04
CP000768_1567(CP000768|pid:none) Campylobacter jejuni subsp. doy... 46 0.001
BC122342_1(BC122342|pid:none) Danio rerio zgc:153593, mRNA (cDNA... 46 0.002
(P49291) RecName: Full=Lazarillo protein; Flags: Precursor; &U1... 45 0.003
BA000036_628(BA000036|pid:none) Corynebacterium glutamicum ATCC ... 45 0.003
CP000577_2231(CP000577|pid:none) Rhodobacter sphaeroides ATCC 17... 44 0.008
CP001150_1936(CP001150|pid:none) Rhodobacter sphaeroides KD131 c... 44 0.008
AE014134_251(AE014134|pid:none) Drosophila melanogaster chromoso... 44 0.008
AE008922_3459(AE008922|pid:none) Xanthomonas campestris pv. camp... 44 0.008
AM039952_683(AM039952|pid:none) Xanthomonas campestris pv. vesic... 42 0.017
AE008923_623(AE008923|pid:none) Xanthomonas axonopodis pv. citri... 42 0.022
AX742867_1(AX742867|pid:none) Sequence 21 from Patent WO03029471. 42 0.029
CP000697_52(CP000697|pid:none) Acidiphilium cryptum JF-5, comple... 41 0.049
CP000431_2523(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 40 0.11
BA000035_645(BA000035|pid:none) Corynebacterium efficiens YS-314... 39 0.14
AP008229_3775(AP008229|pid:none) Xanthomonas oryzae pv. oryzae M... 39 0.19
CP000685_4632(CP000685|pid:none) Flavobacterium johnsoniae UW101... 39 0.19
CP000967_851(CP000967|pid:none) Xanthomonas oryzae pv. oryzae PX... 39 0.19
AE013598_3913(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K... 39 0.19
AK294523_1(AK294523|pid:none) Homo sapiens cDNA FLJ57921 complet... 38 0.32
BT046944_1(BT046944|pid:none) Salmo salar clone ssal-eve-502-044... 38 0.41
BT050326_1(BT050326|pid:none) Salmo salar clone ssal-rgb2-562-20... 37 0.54
AP011115_2281(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 37 0.70
DQ126070_1(DQ126070|pid:none) Triatoma infestans triatin mRNA, c... 37 0.92
AY197704_1(AY197704|pid:none) Schistocerca americana Lazarillo g... 37 0.92
FJ411293_1(FJ411293|pid:none) Periplaneta americana Per a 4 alle... 37 0.92
AY766386_1(AY766386|pid:none) Protoceratium reticulatum lucifera... 36 1.2
CU207366_1941(CU207366|pid:none) Gramella forsetii KT0803 comple... 36 1.6
AM236086_568(AM236086|pid:none) Rhizobium leguminosarum bv. vici... 35 2.0
CS038855_1(CS038855|pid:none) Sequence 34 from Patent WO20050192... 35 2.7
BC152209_1(BC152209|pid:none) Danio rerio retinol binding protei... 35 2.7
AB111522_1(AB111522|pid:none) Carassius auratus mRNA for purpuri... 35 2.7
CS038840_1(CS038840|pid:none) Sequence 19 from Patent WO20050192... 35 3.5
EF134127_1(EF134127|pid:none) Karlodinium micrum strain CCMP1975... 35 3.5
EU325561_1(EU325561|pid:none) Helicoverpa armigera clone HaC5S00... 34 4.6
BT048970_1(BT048970|pid:none) Salmo salar clone ssal-eve-540-371... 34 4.6
AY766382_1(AY766382|pid:none) Alexandrium affine luciferase gene... 34 4.6
EU325855_1(EU325855|pid:none) Oncorhynchus masou formosanus reti... 34 4.6
BC068619_1(BC068619|pid:none) Xenopus laevis serum retinol bindi... 34 4.6
EF600047_1(EF600047|pid:none) Helicoverpa armigera multi-domain ... 34 6.0
CR931716_11(CR931716|pid:none) Streptococcus pneumoniae strain 2... 34 6.0
(P09464) RecName: Full=Bilin-binding protein; Short=BBP... 34 6.0
(P24775) RecName: Full=Plasma retinol-binding protein 2; AltName... 34 6.0
NRL(1BBPA) insecticyanin (bilin binding protein), chain A - cabb... 34 6.0
AY113374_1(AY113374|pid:none) Drosophila melanogaster LP06948 fu... 33 7.8
(Q9VGW1) RecName: Full=Cadherin-86C; Flags: Precursor; &AE01429... 33 7.8
AE001437_39(AE001437|pid:none) Clostridium acetobutylicum ATCC 8... 33 7.8
(P24774) RecName: Full=Plasma retinol-binding protein 1; ... 33 7.8
EU325566_1(EU325566|pid:none) Helicoverpa armigera clone CA707 p... 33 7.8

>CP000685_2124(CP000685|pid:none) Flavobacterium johnsoniae UW101,
complete genome.
Length = 180

Score = 192 bits (487), Expect = 1e-47
Identities = 98/174 (56%), Positives = 122/174 (70%)
Frame = +2

Query: 47 ILIGATILGGVTYAYNSFKRYIPEGVHAVKPFYPEKYVGKWYEIARLYTYFEKDLDKITA 226
+LIGA G+ A S IPE AV F KY+GKWYEIARL +E+DL+ +TA
Sbjct: 9 VLIGA----GIGLALYSCGGGIPEKAKAVTNFDSAKYLGKWYEIARLDYKWERDLNNVTA 64

Query: 227 EYSINKDGSITVVNSGYNYKKKKRENAKGIAYFVNGSDEGMLKVSFFGPFYSGYNVIAID 406
EYS+N+D +I V N GYN KK K E + G A FV + GMLKVSFFGPFYSGYNV+AID
Sbjct: 65 EYSLNEDKTIKVDNKGYNVKKDKWEQSVGKAKFVKKDNIGMLKVSFFGPFYSGYNVVAID 124

Query: 407 PDYKYALIAGQSFDYMWILSKEPTIPEKIKNSYLELAKSVGYDITKLIWSKQNE 568
PDYKYAL+AG+S YMWILS+E TIPE +K +L A+ +GY +T L+W K ++
Sbjct: 125 PDYKYALVAGESLKYMWILSREKTIPESVKADFLIKAQEIGYKVTDLVWVKHDK 178

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 941,791,412
Number of extensions: 17350857
Number of successful extensions: 61806
Number of sequences better than 10.0: 244
Number of HSP's gapped: 61614
Number of HSP's successfully gapped: 245
Length of query: 258
Length of database: 1,051,180,864
Length adjustment: 126
Effective length of query: 132
Effective length of database: 643,374,430
Effective search space: 84925424760
Effective search space used: 84925424760
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)

PSORT

psg: 0.95 gvh: 0.48 alm: 0.35 top: 0.50 tms: 0.00 mit: 0.27 mip: 0.05
nuc: 0.08 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

48.0 %: cytoplasmic
36.0 %: nuclear
4.0 %: extracellular, including cell wall
4.0 %: Golgi
4.0 %: vesicles of secretory system
4.0 %: endoplasmic reticulum

>> prediction for Contig-U13331-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 8
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0