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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U02167-1
Contig ID Contig-U02167-1
Contig update 2001. 8.29
Contig sequence 
>Contig-U02167-1 (Contig-U02167-1Q) /CSM_Contig/Contig-U02167-1Q.Seq.d
ATGAAATCATGCAGATGAAAGAGAAATGGATTCAGAGACTGGTGTTAGTA
TTAGTGATGAGATTTCAAAATTAATTGAAGAACATAAACAAAATGAAGAA
GAGTCATTACCAGATTTACTTGATGTTAATTATGGTGTATTATCTATTAT
TCCAGAAGCTGTTAAATCTGCTGAAGAAACAGTTGAAAATGCATTAAAGA
AATTCACTCATAGCAATGATGATGATGATGATACAACAACTACTTCAATC
ATTATTAATACATCAGATGAATTAAAGAATCATAATATTAATATTGAAAA
TGGAAATGAAGAATCTTTAGTCGATTCATTAGATGTTAATTATAATGTAT
TATCAATTATTCCAGAGAAAGTTAAATCAGCTGAAGAAAAAGTTGAAAAT
GTATTAAAGAAATTTGAAGAACAATATTTGGAGAAAGTTGAAAAATTAAT
TTCTGAAAATATGAAGTTAAAAGTTGATTTTGATAAACTTATCAATGGAA
AAGATGATGAGTTAAAGAGAGTAGAGGAAGAGATTAGAGAAAAGTATAGA
TCATCATTAGATGCAGCTATTGAAGAGTTGAATAAGGATTTGGATGAAAA
GTTAAAGGATATGGATCA----------ATTAAACAATCTGAATTGGAGA
AGAGGGCAATCACTCAATTGACTCAATGCATTGTGGATCTTCAAAAACTT
TTACATGATAAATCAGCTATCGACGGTGCTAATGGTAAGGGATTGCTCGT
TAGATCGTTCAAGAATTTGACAGATCTTTCAAACTATGATCAGTTGATTA
AGGAATTACTCTCGACTTTACCAGAAGGATTTGAAAAGAAGCCAGTCATT
CCTCTCGATACATTGAATAATCAATTCCAAGATATTGCAAAGAAATTGAG
AAAGTCTCAATTAATCGATCCAAATGATAATTCTTTGCTTGGTAAAGCAG
TCTCAGAGTTGGCTTCTTTATTTATCATTCCAGAGAAAGGTATGGTTCAA
GGTAATGATTATGATGCTATCTTGGCTCGTGCTGAAGATCACTTAAGAAA
AAATAATCTCTCCTCTGCTATCAAAGAAATGGAATCCATTCAACAACAAT
CCTCAAAATCATCAACAAACATCGATAATCATCACCTTTCAAAATTAACT
TCCAATTGGATTAAACAAGCAAAAGAAAGAGATCAATTAGAAAATATTTC
AAAATTATTAGAGTTAAAATTGGAATTAATTCATAAACAACAACAACAAA
TTAAAGAGGAACAACAAAAATAAATAAATAAATAAATAAATAAATAAAAA
AAAATAAAAAAAAAATAA
Gap gap included
Contig length 1308
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 4815715
End point 4817025
Strand (PLUS/MINUS) PLUS
Number of clones 4
Number of EST 5
Link to clone list U02167
List of clone(s) 

est1=VFG322F,1,619
est2=VFG322Z,620,1295
est3=AFE731Z,630,1284
est4=VSC108E,908,1296
est5=VSA678E,1023,1310
Translated Amino Acid sequence 
*NHADEREMDSETGVSISDEISKLIEEHKQNEEESLPDLLDVNYGVLSIIPEAVKSAEET
VENALKKFTHSNDDDDDTTTTSIIINTSDELKNHNINIENGNEESLVDSLDVNYNVLSII
PEKVKSAEEKVENVLKKFEEQYLEKVEKLISENMKLKVDFDKLINGKDDELKRVEEEIRE
KYRSSLDAAIEELNKDLDEKLKDMD---

---IKQSELEKRAITQLTQCIVDLQKLLHDKSAIDGANGKGLLVRSFKNLTDLSNYDQLI
KELLSTLPEGFEKKPVIPLDTLNNQFQDIAKKLRKSQLIDPNDNSLLGKAVSELASLFII
PEKGMVQGNDYDAILARAEDHLRKNNLSSAIKEMESIQQQSSKSSTNIDNHHLSKLTSNW
IKQAKERDQLENISKLLELKLELIHKQQQQIKEEQQK*ink*ink*kkikkk*
Translated Amino Acid sequence (All Frames) 
Frame A:
mkscr*krngfrdwc*y***dfkin*rt*tk*rrvitrft*c*lwciiyysrsc*ic*rn
s*kcikeihs*q*****ynnyfnhy*yir*ikes*y*y*kwk*rifsrfirc*l*ciiny
sres*is*rks*kcikei*rtifges*kinf*kyevks*f**tyqwkr**vkesrgrd*r
kv*iiircsy*rve*gfg*kvkgygs---

---IKQSELEKRAITQLTQCIVDLQKLLHDKSAIDGANGKGLLVRSFKNLTDLSNYDQLI
KELLSTLPEGFEKKPVIPLDTLNNQFQDIAKKLRKSQLIDPNDNSLLGKAVSELASLFII
PEKGMVQGNDYDAILARAEDHLRKNNLSSAIKEMESIQQQSSKSSTNIDNHHLSKLTSNW
IKQAKERDQLENISKLLELKLELIHKQQQQIKEEQQK*ink*ink*kkikkk*

Frame B:
*NHADEREMDSETGVSISDEISKLIEEHKQNEEESLPDLLDVNYGVLSIIPEAVKSAEET
VENALKKFTHSNDDDDDTTTTSIIINTSDELKNHNINIENGNEESLVDSLDVNYNVLSII
PEKVKSAEEKVENVLKKFEEQYLEKVEKLISENMKLKVDFDKLINGKDDELKRVEEEIRE
KYRSSLDAAIEELNKDLDEKLKDMD---

---lnnlnwrrgqsln*lnalwifknfyminqlstvlmvrdcsldrsri*qifqtmis*l
rnysrlyqkdlkrsqsflsih*iinskilqrn*esln*siqmiilclvkqsqswllylsf
qrkvwfkvmimmlswlvlkit*ekiispllskkwnpfnnnpqnhqqtsiiitfqn*lpig
lnkqkkein*kifqny*s*nwn*finnnnklkrnnknk*ink*inkkk*kkn

Frame C:
eimqmkekwiqrlvlvlvmrfqn*lkninkmkkshyqiylmlimvyyllfqkllnllkkq
lkmh*rnsliammmmmiqqllqsllihqmn*riiililkmemknl*sih*mliimyyqlf
qrklnqlkkklkmy*rnlknniwrklkn*flki*s*klilinlsmekmms*re*rkrlek
sidhh*mqllks*iriwmks*riwi---

---*ti*igeegnhsidsmhcgssktft**isyrrc*w*giar*ivqefdrsfkl*svd*
gitldftrri*keashssryie*sipryckeiekvsinrsk**ffaw*sslrvgffiyhs
rerygsr**l*cylgsc*rslkkk*sllcyqrngihsttilkiinkhr*sspfkinfqld
*tskrkrsirkyfkiirvkigins*ttttn*rgttkink*ink*ikknkkki
own update 2004. 6. 9
Homology vs CSM-cDNA 
Query= Contig-U02167-1 (Contig-U02167-1Q)
/CSM_Contig/Contig-U02167-1Q.Seq.d
         (1318 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U02167-1 (Contig-U02167-1Q) /CSM_Contig/Conti...  1988  0.0
Contig-U12206-1 (Contig-U12206-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U07718-1 (Contig-U07718-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U13453-1 (Contig-U13453-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U12327-1 (Contig-U12327-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U04549-1 (Contig-U04549-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U12458-1 (Contig-U12458-1Q) /CSM_Contig/Conti...    38  0.024
Contig-U12095-1 (Contig-U12095-1Q) /CSM_Contig/Conti...    38  0.024
Contig-U11546-1 (Contig-U11546-1Q) /CSM_Contig/Conti...    38  0.024
Contig-U08981-1 (Contig-U08981-1Q) /CSM_Contig/Conti...    38  0.024

>Contig-U02167-1 (Contig-U02167-1Q) /CSM_Contig/Contig-U02167-1Q.Seq.d
          Length = 1318

 Score = 1988 bits (1003), Expect = 0.0
 Identities = 1033/1033 (100%)
 Strand = Plus / Plus

                                                                        
Query: 233  acaacaactacttcaatcattattaatacatcagatgaattaaagaatcataatattaat 292
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233  acaacaactacttcaatcattattaatacatcagatgaattaaagaatcataatattaat 292

                                                                        
Query: 293  attgaaaatggaaatgaagaatctttagtcgattcattagatgttaattataatgtatta 352
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293  attgaaaatggaaatgaagaatctttagtcgattcattagatgttaattataatgtatta 352

                                                                        
Query: 353  tcaattattccagagaaagttaaatcagctgaagaaaaagttgaaaatgtattaaagaaa 412
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353  tcaattattccagagaaagttaaatcagctgaagaaaaagttgaaaatgtattaaagaaa 412

                                                                        
Query: 413  tttgaagaacaatatttggagaaagttgaaaaattaatttctgaaaatatgaagttaaaa 472
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413  tttgaagaacaatatttggagaaagttgaaaaattaatttctgaaaatatgaagttaaaa 472

                                                                        
Query: 473  gttgattttgataaacttatcaatggaaaagatgatgagttaaagagagtagaggaagag 532
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473  gttgattttgataaacttatcaatggaaaagatgatgagttaaagagagtagaggaagag 532

                                                                        
Query: 533  attagagaaaagtatagatcatcattagatgcagctattgaagagttgaataaggatttg 592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533  attagagaaaagtatagatcatcattagatgcagctattgaagagttgaataaggatttg 592

                                                                        
Query: 593  gatgaaaagttaaaggatatggatcannnnnnnnnnattaaacaatctgaattggagaag 652
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593  gatgaaaagttaaaggatatggatcannnnnnnnnnattaaacaatctgaattggagaag 652

                                                                        
Query: 653  agggcaatcactcaattgactcaatgcattgtggatcttcaaaaacttttacatgataaa 712
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653  agggcaatcactcaattgactcaatgcattgtggatcttcaaaaacttttacatgataaa 712

                                                                        
Query: 713  tcagctatcgacggtgctaatggtaagggattgctcgttagatcgttcaagaatttgaca 772
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713  tcagctatcgacggtgctaatggtaagggattgctcgttagatcgttcaagaatttgaca 772

                                                                        
Query: 773  gatctttcaaactatgatcagttgattaaggaattactctcgactttaccagaaggattt 832
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773  gatctttcaaactatgatcagttgattaaggaattactctcgactttaccagaaggattt 832

                                                                        
Query: 833  gaaaagaagccagtcattcctctcgatacattgaataatcaattccaagatattgcaaag 892
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833  gaaaagaagccagtcattcctctcgatacattgaataatcaattccaagatattgcaaag 892

                                                                        
Query: 893  aaattgagaaagtctcaattaatcgatccaaatgataattctttgcttggtaaagcagtc 952
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893  aaattgagaaagtctcaattaatcgatccaaatgataattctttgcttggtaaagcagtc 952

                                                                        
Query: 953  tcagagttggcttctttatttatcattccagagaaaggtatggttcaaggtaatgattat 1012
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 953  tcagagttggcttctttatttatcattccagagaaaggtatggttcaaggtaatgattat 1012

                                                                        
Query: 1013 gatgctatcttggctcgtgctgaagatcacttaagaaaaaataatctctcctctgctatc 1072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 gatgctatcttggctcgtgctgaagatcacttaagaaaaaataatctctcctctgctatc 1072

                                                                        
Query: 1073 aaagaaatggaatccattcaacaacaatcctcaaaatcatcaacaaacatcgataatcat 1132
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1073 aaagaaatggaatccattcaacaacaatcctcaaaatcatcaacaaacatcgataatcat 1132

                                                                        
Query: 1133 cacctttcaaaattaacttccaattggattaaacaagcaaaagaaagagatcaattagaa 1192
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1133 cacctttcaaaattaacttccaattggattaaacaagcaaaagaaagagatcaattagaa 1192

                                                                        
Query: 1193 aatatttcaaaattattagagttaaaattggaattaattcataaacaacaacaacaaatt 1252
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1193 aatatttcaaaattattagagttaaaattggaattaattcataaacaacaacaacaaatt 1252

                         
Query: 1253 aaagaggaacaac 1265
            |||||||||||||
Sbjct: 1253 aaagaggaacaac 1265


 Score =  426 bits (215), Expect = e-119
 Identities = 215/215 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaatcatgcagatgaaagagaaatggattcagagactggtgttagtattagtgatga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgaaatcatgcagatgaaagagaaatggattcagagactggtgttagtattagtgatga 60

                                                                       
Query: 61  gatttcaaaattaattgaagaacataaacaaaatgaagaagagtcattaccagatttact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gatttcaaaattaattgaagaacataaacaaaatgaagaagagtcattaccagatttact 120

                                                                       
Query: 121 tgatgttaattatggtgtattatctattattccagaagctgttaaatctgctgaagaaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgatgttaattatggtgtattatctattattccagaagctgttaaatctgctgaagaaac 180

                                              
Query: 181 agttgaaaatgcattaaagaaattcactcatagca 215
           |||||||||||||||||||||||||||||||||||
Sbjct: 181 agttgaaaatgcattaaagaaattcactcatagca 215


 Score = 85.7 bits (43), Expect = 1e-16
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                       
Query: 122 gatgttaattatggtgtattatctattattccagaagctgttaaatctgctgaagaaaca 181
           ||||||||||||  ||||||||| |||||||||||    |||||||| |||||||||| |
Sbjct: 332 gatgttaattataatgtattatcaattattccagagaaagttaaatcagctgaagaaaaa 391

                                  
Query: 182 gttgaaaatgcattaaagaaatt 204
           |||||||||| ||||||||||||
Sbjct: 392 gttgaaaatgtattaaagaaatt 414


 Score = 85.7 bits (43), Expect = 1e-16
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                       
Query: 332 gatgttaattataatgtattatcaattattccagagaaagttaaatcagctgaagaaaaa 391
           ||||||||||||  ||||||||| |||||||||||    |||||||| |||||||||| |
Sbjct: 122 gatgttaattatggtgtattatctattattccagaagctgttaaatctgctgaagaaaca 181

                                  
Query: 392 gttgaaaatgtattaaagaaatt 414
           |||||||||| ||||||||||||
Sbjct: 182 gttgaaaatgcattaaagaaatt 204


>Contig-U12206-1 (Contig-U12206-1Q) /CSM_Contig/Contig-U12206-1Q.Seq.d
          Length = 993

 Score = 42.1 bits (21), Expect = 0.002
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 1236 aacaacaacaacaaattaaagaggaacaa 1264
            ||||||||||||||||| || ||||||||
Sbjct: 509  aacaacaacaacaaattcaacaggaacaa 537


 Score = 30.2 bits (15), Expect = 5.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 1238 caacaacaacaaatt 1252
            |||||||||||||||
Sbjct: 403  caacaacaacaaatt 417


>Contig-U07718-1 (Contig-U07718-1Q) /CSM_Contig/Contig-U07718-1Q.Seq.d
          Length = 1404

 Score = 42.1 bits (21), Expect = 0.002
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 273 taaagaatcataatattaatattgaaaat 301
           |||||||| |||||||||||| |||||||
Sbjct: 75  taaagaataataatattaataatgaaaat 103


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 28,951
Number of Sequences: 6905
Number of extensions: 28951
Number of successful extensions: 7113
Number of sequences better than 10.0: 669
length of query: 1318
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1302
effective length of database: 5,564,391
effective search space: 7244837082
effective search space used: 7244837082
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 5.15
Homology vs DNA 
Query= Contig-U02167-1 (Contig-U02167-1Q) /CSM_Contig/Contig-U02167-1Q.Seq.d
         (1318 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ431187) Dictyostelium discoideum cDNA clone:ddv13l05, 3' ...  1162   0.0    1
(BJ339798) Dictyostelium discoideum cDNA clone:dda10n07, 3' ...  1142   0.0    1
(BJ412866) Dictyostelium discoideum cDNA clone:ddv13l05, 5' ...   765   0.0    2
(AU262334) Dictyostelium discoideum vegetative cDNA clone:VS...   591   e-164  1
(AU261654) Dictyostelium discoideum vegetative cDNA clone:VS...   218   4e-52  1
(AB031194) Ophiocordyceps konnoana mitochondrial gene for sm...    58   0.001  1
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g...    38   0.001  11
(EK199261) 1095460050540 Global-Ocean-Sampling_GS-31-01-01-1...    56   0.004  1
(AC137832) Medicago truncatula chromosome 6 clone mth2-22i17...    32   0.022  11
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp...    34   0.048  17
(AF222894) Ureaplasma parvum serovar 3 str. ATCC 700970, com...    34   0.048  17
(AL035476) Plasmodium falciparum MAL4P3.                           40   0.12   10
(AY653733) Acanthamoeba polyphaga mimivirus, complete genome.      40   0.13   24
(AC150957) Bos taurus clone CH240-268D6, WORKING DRAFT SEQUE...    40   0.14   6
(CP000678) Methanobrevibacter smithii ATCC 35061, complete g...    40   0.21   22
(CR384587) Arabidopsis thaliana transposon insertion STS GT_...    50   0.22   1
(AC009325) Arabidopsis thaliana chromosome III BAC F4P13 gen...    50   0.22   1
(EJ692117) 1092956006465 Global-Ocean-Sampling_GS-30-02-01-1...    50   0.22   1
(EJ665228) 1092955038791 Global-Ocean-Sampling_GS-30-02-01-1...    50   0.22   1
(DX532386) GH_MBb0048E20f GH_MBb Gossypium hirsutum genomic ...    50   0.22   1
(EJ305168) 1095390072942 Global-Ocean-Sampling_GS-27-01-01-1...    46   0.25   2
(EK393509) 1095469510293 Global-Ocean-Sampling_GS-31-01-01-1...    44   0.29   2
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...    34   0.44   15
(CU639407) Zebrafish DNA sequence from clone CH1073-45B16 in...    42   0.67   4
(CN623929) tae57d06.y1 Hydra EST Darmstadt I Hydra magnipapi...    38   0.73   2
(CU638711) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    42   0.78   4
(CU914402) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   0.82   5
(AM460108) Vitis vinifera contig VV78X236333.11, whole genom...    48   0.87   1
(AC189616) Brassica rapa subsp. pekinensis clone KBrH099I08,...    48   0.87   1
(CR548612) Paramecium tetraurelia macronuclear largest chrom...    48   0.87   1
(AC111677) Rattus norvegicus clone CH230-46L15, *** SEQUENCI...    48   0.87   1
(AC166412) Bos taurus clone CH240-185K4, WORKING DRAFT SEQUE...    48   0.87   1
(DX455047) MAMAD79TR MA4 Musa acuminata genomic clone MA4-4M...    48   0.87   1
(CD254581) AGENCOURT_14216854 NICHD_XGC_Eye1 Xenopus laevis ...    48   0.87   1
(CP000783) Enterobacter sakazakii ATCC BAA-894, complete gen...    48   0.87   1
(AC202361) Medicago truncatula clone mth2-57i21, WORKING DRA...    38   1.1    6
(AC118803) Rattus norvegicus clone CH230-106N12, *** SEQUENC...    44   1.2    4
(AL161898) Human DNA sequence from clone RP11-270H22 on chro...    42   1.2    4
(AC202368) Medicago truncatula clone mth2-73h18, complete se...    36   1.3    7
(AE014832) Plasmodium falciparum 3D7 chromosome 10 section 4...    34   1.3    12
(Z84483) Human DNA sequence from clone RP1-46H23 on chromoso...    42   1.3    4
(AE017243) Mycoplasma hyopneumoniae J, complete genome.            36   1.5    16
(FM992689) Candida dubliniensis CD36 chromosome 2, complete ...    36   1.5    2
(AC182564) Mimulus guttatus clone MGBa-44P14, complete seque...    38   1.8    8
(DQ134525) Plasmodium falciparum isolate BAK1 EMP1 (var-895)...    44   2.0    2
(DQ134883) Plasmodium falciparum isolate BAK15 EMP1 (var-128...    44   2.0    2
(Z84464) Human DNA sequence *** SEQUENCING IN PROGRESS *** f...    42   2.2    5
(DD010062) Immunogenic compositions comprising Liver Stage M...    36   2.4    3
(AX536319) Sequence 3 from Patent WO0238176.                       36   2.4    3
(AX428968) Sequence 3 from Patent EP1201250.                       36   2.4    3
(AJ007011) Plasmodium falciparum LSA-3, strain T9/96, partia...    36   2.5    3
(AC190260) Gossypium hirsutum chromosome UNKNOWN clone ZMMBB...    34   2.8    6
(CU914734) H.numata DNA sequence from clone AEHN-41G24.            38   2.8    5
(CS255975) Sequence 3 from Patent EP1621547.                       36   2.9    3
(A58934) Sequence 3 from Patent WO9641877.                         36   2.9    3
(AR916607) Sequence 4 from patent US 7056518.                      36   2.9    3
(AR131273) Sequence 3 from patent US 6191270.                      36   2.9    3
(CW909538) RPCI42_150I4.TV RPCI-42 Bos taurus genomic clone ...    36   2.9    2
(DU200419) 1098553681440 CHORI-243 Ovis aries genomic clone ...    36   3.1    2
(AE014842) Plasmodium falciparum 3D7 chromosome 11 section 7...    38   3.2    8
(BZ075126) lkf69f04.b1 B.oleracea002 Brassica oleracea genom...    38   3.2    2
(AY689437) Deerpox virus W-1170-84, complete genome.               34   3.4    8
(AC192104) Gallus gallus BAC clone CH261-58G10 from chromoso...    46   3.4    1
(AC131586) Mus musculus chromosome 14, clone RP24-226L18, co...    46   3.4    1
(CT836639) Oryza sativa (indica cultivar-group) cDNA clone:O...    46   3.4    1
(AC135231) Medicago truncatula clone mth2-28m10, complete se...    46   3.4    1
(DL251187) Organ-specific Genes, Method for Identifying Same...    46   3.4    1
(CQ779397) Sequence 3 from Patent EP1396544.                       46   3.4    1
(BD084122) Polymorphisms and new genes in the region of the ...    46   3.4    1
(BD084121) Polymorphisms and new genes in the region of the ...    46   3.4    1
(AR882951) Sequence 2 from patent US 7052845.                      46   3.4    1
(AR882950) Sequence 1 from patent US 7052845.                      46   3.4    1
(AR821305) Sequence 2 from patent US 7026116.                      46   3.4    1
(AR821304) Sequence 1 from patent US 7026116.                      46   3.4    1
(AR036574) Sequence 22 from patent US 5872237.                     46   3.4    1
(AR036573) Sequence 21 from patent US 5872237.                     46   3.4    1
(AR036572) Sequence 20 from patent US 5872237.                     46   3.4    1
(EU787849) Plasmodium falciparum isolate a38D233f130.1 eryth...    46   3.4    1
(EU787611) Plasmodium falciparum isolate A38C130.4 erythrocy...    46   3.4    1
(DQ135827) Plasmodium falciparum isolate AME6 EMP1 (var-1610...    46   3.4    1
(DQ135118) Plasmodium falciparum isolate BAK26 EMP1 (var-153...    46   3.4    1
(AY054799) Plasmodium falciparum isolate AN20 isolate AN143 ...    46   3.4    1
(U91328) Human hereditary haemochromatosis region, histone 2...    46   3.4    1
(CR974482) Human DNA sequence from clone CHORI-516-BCA274P22...    46   3.4    1
(CR956432) Human DNA sequence from clone CHORI-516-BCA399M2 ...    46   3.4    1
(AL365214) Human DNA sequence from clone RP11-506B6 on chrom...    46   3.4    1
(AL359915) Human DNA sequence from clone RP11-418J17 on chro...    46   3.4    1
(AL161787) Human DNA sequence from clone RP11-40C6 on chromo...    46   3.4    1
(AL031010) Human DNA sequence from clone RP3-422F24 on chrom...    46   3.4    1
(AC010872) Homo sapiens BAC clone RP11-83B6 from 2, complete...    46   3.4    1
(AC114314) Homo sapiens chromosome 5 clone RP11-322G2, WORKI...    46   3.4    1
(CU633318) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   3.4    1
(CU041250) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   3.4    1
(AC210740) Zea mays chromosome 2 clone CH201-183G21; ZMMBBc0...    46   3.4    1
(AC178716) Strongylocentrotus purpuratus clone R3-3005M5, WO...    46   3.4    1
(AC012145) Homo sapiens clone RP11-11K15, WORKING DRAFT SEQU...    46   3.4    1
(AK030403) Mus musculus adult male pituitary gland cDNA, RIK...    46   3.4    1
(AK007402) Mus musculus 10 day old male pancreas cDNA, RIKEN...    46   3.4    1
(BH158662) ENTSO86TR Entamoeba histolytica Sheared DNA Entam...    46   3.4    1
(FH398738) CHO_OF4813xc17f1.ab1 CHO_OF4 Nicotiana tabacum ge...    46   3.4    1
(FH316958) CHO_OF4490xj13r1.ab1 CHO_OF4 Nicotiana tabacum ge...    46   3.4    1
(ER765119) SB_BBc212-O23.F SB_BBc Sorghum bicolor genomic 5'...    46   3.4    1
(ER695201) SB_BBc162-P20.F SB_BBc Sorghum bicolor genomic 5'...    46   3.4    1
(ER645403) SB_BBc86-K05.R SB_BBc Sorghum bicolor genomic 3',...    46   3.4    1
(AM641198) Entamoeba dispar GSS, clone dispar80g09.p1k.            46   3.4    1
(AM637858) Entamoeba dispar GSS, clone dispar48d05.q1k.            46   3.4    1
(AM634978) Entamoeba dispar GSS, clone dispar130h04.p1k.           46   3.4    1
(AM627148) Entamoeba dispar GSS, clone dispar1d02.p1k.             46   3.4    1
(EI703066) IGBR013G24TF BAC library from the recurrent gliob...    46   3.4    1
(DU585747) OO__Ba0077J06.r OO__Ba Oryza officinalis genomic ...    46   3.4    1
(CR898186) Sus scrofa BES.                                         46   3.4    1
(EE627277) CHWS712.b1_P10.ab1 CHW(LMS) silverleaf sunflower ...    46   3.4    1
(EE588908) rCO32nFBr68 Ugandan isolate UAM32 Pf var gene cDN...    46   3.4    1
(EE588414) fCO32nFBr68 Ugandan isolate UAM32 Pf var gene cDN...    46   3.4    1
(EE580555) rCO28nDBL19 Ugandan isolate UAM28 Pf var gene cDN...    46   3.4    1
(EE580466) fCO28nDBL19 Ugandan isolate UAM28 Pf var gene cDN...    46   3.4    1
(AV049290) Mus musculus adult male pancreas cDNA, partial se...    46   3.4    1
(CA922805) EST640523 MTUS Medicago truncatula cDNA clone MTU...    46   3.4    1
(BI519450) 603062279R1 NIH_MGC_118 Homo sapiens cDNA clone I...    46   3.4    1
(BE941900) EST421551 MGHG Medicago truncatula cDNA clone pMG...    46   3.4    1
(FC804869) CBGC6753.fwd CBGC Lottia gigantea 15h 18h embryos...    46   3.4    1
(FC799407) CBGC2911.fwd CBGC Lottia gigantea 15h 18h embryos...    46   3.4    1
(FC799406) CBGC2911.rev CBGC Lottia gigantea 15h 18h embryos...    46   3.4    1
(FC721089) CBBG1382.fwd CBBG Lottia gigantea 12,15,18h embry...    46   3.4    1
(FC721088) CBBG1382.rev CBBG Lottia gigantea 12,15,18h embry...    46   3.4    1
(FC690688) CAXX21481.rev CAXX Lottia gigantea from male gona...    46   3.4    1
(FC680195) CAXX1401.rev CAXX Lottia gigantea from male gonad...    46   3.4    1
(BH547154) BOHMF21TR BOHM Brassica oleracea genomic clone BO...    36   3.6    2
(EK392782) 1095469508238 Global-Ocean-Sampling_GS-31-01-01-1...    38   3.7    2
(EE578613) fSE41nFBr21 Ugandan isolate UAS41 Pf var gene cDN...    40   4.0    2
(AU071833) Dictyostelium discoideum slug cDNA, clone SSC607.       40   4.3    2
(AC181513) Strongylocentrotus purpuratus clone R3-61D22, WOR...    42   4.5    5
(CU915337) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   4.6    7
(CT571255) Mouse DNA sequence *** SEQUENCING CANCELLED *** f...    40   4.7    5
(GC697222) Sequence 12467 from patent US 6812339.                  42   4.7    2
(GC701030) Sequence 16275 from patent US 6812339.                  42   4.7    2
(ER355257) 1092351046761 Global-Ocean-Sampling_GS-34-01-01-1...    36   4.8    3
(EE582203) fCO40AF35 Ugandan isolate UAM40 Pf var gene cDNA ...    42   4.8    2
(AP008971) Finegoldia magna ATCC 29328 DNA, complete genome.       32   4.9    20
(AC092098) Homo sapiens BAC clone RP11-533K11 from 7, comple...    40   4.9    3
(AL445565) Mycoplasma pulmonis (strain UAB CTIP) complete ge...    36   5.5    14
(BB220063) Mus musculus adult male aorta and vein cDNA, RIKE...    36   5.8    2
(AC156706) Bos taurus clone CH240-56P12, WORKING DRAFT SEQUE...    34   6.3    2
(CU606894) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    32   6.4    2
(CU606999) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    32   6.4    2
(AC213863) Solanum tuberosum chromosome 6 clone RHPOTKEY139E...    36   6.5    5
(AC204909) Macaca mulatta clone CH250-550M22, WORKING DRAFT ...    42   6.5    4
(DQ265529) Plasmodium falciparum isolate Pf1544_58 EMP1 (var...    40   6.7    2
(AE017244) Mycoplasma hyopneumoniae 7448, complete genome.         36   6.8    17
(AM422018) Candidatus Phytoplasma australiense complete genome.    32   6.8    22
(AL713980) Human DNA sequence from clone XXbac-81I18 on chro...    42   6.9    2
(AC095383) Rattus norvegicus clone CH230-6N16, *** SEQUENCIN...    36   7.0    8
(AC214284) Populus trichocarpa clone POP076-F15, complete se...    32   7.0    9
(EE582239) rCO40AF35 Ugandan isolate UAM40 Pf var gene cDNA ...    42   7.3    2
(C84247) Dictyostelium discoideum slug cDNA, clone SSB383.         40   7.4    2
(FE231289) CAPG10346.fwd CAPG Naegleria gruberi amoeba stage...    32   7.7    3
(CP000033) Lactobacillus acidophilus NCFM, complete genome.        32   8.1    26
(CT070707) Sus scrofa genomic clone PigE-245O19, genomic sur...    34   8.7    3
(EJ232104) 1092404026591 Global-Ocean-Sampling_GS-27-01-01-1...    32   8.8    3
(AL766846) Streptococcus agalactiae NEM316 complete genome, ...    34   8.9    10
(AC151744) Medicago truncatula chromosome 8 clone mth2-32k10...    34   8.9    5
(AE017332) Mycoplasma hyopneumoniae 232, complete genome.          36   9.0    16
(AC011794) Homo sapiens clone RP11-17L14, WORKING DRAFT SEQU...    36   9.3    9
(BE578673) rk16g12.y1 Meloidogyne javanica Egg SL1 Topo1 Klo...    34   9.7    2
(CU694638) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    40   9.7    4
(AC217337) Solanum lycopersicum chromosome 7 clone C07SLe004...    44   10.0   2

>(BJ431187) Dictyostelium discoideum cDNA clone:ddv13l05, 3' end,
            single read.
          Length = 676

 Score = 1162 bits (586), Expect = 0.0
 Identities = 586/586 (100%)
 Strand = Plus / Minus


Query: 629  attaaacaatctgaattggagaagagggcaatcactcaattgactcaatgcattgtggat 688
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676  attaaacaatctgaattggagaagagggcaatcactcaattgactcaatgcattgtggat 617


Query: 689  cttcaaaaacttttacatgataaatcagctatcgacggtgctaatggtaagggattgctc 748
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616  cttcaaaaacttttacatgataaatcagctatcgacggtgctaatggtaagggattgctc 557


Query: 749  gttagatcgttcaagaatttgacagatctttcaaactatgatcagttgattaaggaatta 808
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556  gttagatcgttcaagaatttgacagatctttcaaactatgatcagttgattaaggaatta 497


Query: 809  ctctcgactttaccagaaggatttgaaaagaagccagtcattcctctcgatacattgaat 868
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496  ctctcgactttaccagaaggatttgaaaagaagccagtcattcctctcgatacattgaat 437


Query: 869  aatcaattccaagatattgcaaagaaattgagaaagtctcaattaatcgatccaaatgat 928
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436  aatcaattccaagatattgcaaagaaattgagaaagtctcaattaatcgatccaaatgat 377


Query: 929  aattctttgcttggtaaagcagtctcagagttggcttctttatttatcattccagagaaa 988
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376  aattctttgcttggtaaagcagtctcagagttggcttctttatttatcattccagagaaa 317


Query: 989  ggtatggttcaaggtaatgattatgatgctatcttggctcgtgctgaagatcacttaaga 1048
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316  ggtatggttcaaggtaatgattatgatgctatcttggctcgtgctgaagatcacttaaga 257


Query: 1049 aaaaataatctctcctctgctatcaaagaaatggaatccattcaacaacaatcctcaaaa 1108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256  aaaaataatctctcctctgctatcaaagaaatggaatccattcaacaacaatcctcaaaa 197


Query: 1109 tcatcaacaaacatcgataatcatcacctttcaaaattaacttccaattggattaaacaa 1168
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196  tcatcaacaaacatcgataatcatcacctttcaaaattaacttccaattggattaaacaa 137


Query: 1169 gcaaaagaaagagatcaattagaaaatatttcaaaattattagagt 1214
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136  gcaaaagaaagagatcaattagaaaatatttcaaaattattagagt 91

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,737,066,025
Number of extensions: 108227566
Number of successful extensions: 9255419
Number of sequences better than 10.0: 166
Length of query: 1318
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 1294
Effective length of database: 99,340,224,878
Effective search space: 128546250992132
Effective search space used: 128546250992132
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.19
Homology vs Protein 
Query= Contig-U02167-1 (Contig-U02167-1Q) /CSM_Contig/Contig-U02167-1Q.Seq.d
         (1318 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014185_74(AE014185|pid:none) Plasmodium falciparum 3D7 chromos...    54   1e-05
GN103254_1(GN103254|pid:none) Sequence 8035 from Patent WO200903...    52   5e-05
EF146959_1(EF146959|pid:none) Populus trichocarpa clone WS01225_...    50   2e-04
AL606657_6(AL606657|pid:none) Oryza sativa genomic DNA, chromoso...    49   3e-04
CR380953_327(CR380953|pid:none) Candida glabrata strain CBS138 c...    49   4e-04
BX842682_20(BX842682|pid:none) Neurospora crassa DNA linkage gro...    48   7e-04
GN103252_1(GN103252|pid:none) Sequence 8033 from Patent WO200903...    46   0.003
AE014187_59(AE014187|pid:none) Plasmodium falciparum 3D7 chromos...    44   0.010
BC112337_1(BC112337|pid:none) Homo sapiens kinectin 1 (kinesin r...    43   0.029
AE014187_515(AE014187|pid:none) Plasmodium falciparum 3D7 chromo...    42   0.038
BA000023_2271(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,...    41   0.11
(Q8IIG7) RecName: Full=Uncharacterized protein PF11_0207;  &AE01...    41   0.11
(Q9UZC8) RecName: Full=DNA double-strand break repair rad50 ATPa...    40   0.14
A60234(A60234;S14595;A60230) IgA Fc receptor precursor - Strepto...    40   0.19
AB121739_1(AB121739|pid:none) Streptococcus agalactiae cba gene ...    40   0.19
CP000587_319(CP000587|pid:none) Ostreococcus lucimarinus CCE9901...    40   0.19
(P27951) RecName: Full=IgA FC receptor; AltName: Full=Beta antig...    40   0.19
FCSOAG(S15330;S20240;S17038)IgA Fc receptor precursor - Streptoc...    40   0.19
AB221536_3(AB221536|pid:none) Streptococcus agalactiae IS1381-li...    40   0.19
CP000114_132(CP000114|pid:none) Streptococcus agalactiae A909, c...    40   0.19
CP001230_1568(CP001230|pid:none) Persephonella marina EX-H1, com...    40   0.19
AY812574_1(AY812574|pid:none) Schistosoma japonicum SJCHGC05759 ...    40   0.24
T18372(T18372) repeat organellar protein - Plasmodium chabaudi  ...    39   0.42
AY598359_3(AY598359|pid:none) Streptococcus agalactiae strain 98...    39   0.42
AP008972_138(AP008972|pid:none) Finegoldia magna ATCC 29328 plas...    39   0.42
S44641(S44641;T16291)hypothetical protein F37A4.4 - Caenorhabdit...    39   0.55
AM412317_2872(AM412317|pid:none) Clostridium botulinum A str. AT...    39   0.55
AE014188_63(AE014188|pid:none) Plasmodium falciparum 3D7 chromos...    39   0.55
(P41882) RecName: Full=Ankyrin repeat-containing protein F37A4.4...    39   0.55
AF092908_1(AF092908|pid:none) Candida albicans cytoskeleton asse...    38   0.71
AJ009556_1(AJ009556|pid:none) Candida albicans sla2 gene.  &T182...    38   0.71
AE014187_616(AE014187|pid:none) Plasmodium falciparum 3D7 chromo...    38   0.71
CP001047_455(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ...    38   0.71
AM910991_358(AM910991|pid:none) Plasmodium knowlesi strain H chr...    38   0.93
(Q98R67) RecName: Full=Protein grpE; AltName: Full=HSP-70 cofact...    38   0.93
AK152588_1(AK152588|pid:none) Mus musculus bone marrow macrophag...    38   0.93
AK159909_1(AK159909|pid:none) Mus musculus osteoclast-like cell ...    37   1.2
CP000312_806(CP000312|pid:none) Clostridium perfringens SM101, c...    37   1.2
(Q8CAQ8) RecName: Full=Mitochondrial inner membrane protein; Alt...    37   1.2
AK049189_1(AK049189|pid:none) Mus musculus ES cells cDNA, RIKEN ...    37   1.2
BC061010_1(BC061010|pid:none) Mus musculus inner membrane protei...    37   1.2
(Q9ZL57) RecName: Full=Protein translocase subunit secA;  &AE001...    37   1.2
AK033126_1(AK033126|pid:none) Mus musculus 15 days embryo male t...    37   1.2
CP001047_113(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ...    37   1.2
CP000879_1305(CP000879|pid:none) Petrotoga mobilis SJ95, complet...    37   1.6
(B2A157) RecName: Full=Trigger factor;          Short=TF;  &CP00...    37   1.6
CP001047_351(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ...    37   1.6
AE000657_451(AE000657|pid:none) Aquifex aeolicus VF5, complete g...    37   1.6
CP000728_2772(CP000728|pid:none) Clostridium botulinum F str. La...    37   1.6
CU928171_576(CU928171|pid:none) Kluyveromyces thermotolerans str...    37   1.6
CP000436_1451(CP000436|pid:none) Haemophilus somnus 129PT, compl...    37   1.6
AL844506_143(AL844506|pid:none) Plasmodium falciparum 3D7 chromo...    37   2.1
(Q54GP1) RecName: Full=DCN1-like protein 1; AltName: Full=Defect...    37   2.1
(Q5BEN5) RecName: Full=Protein stu1;                                   37   2.1
Y10912_1(Y10912|pid:none) D.melanogaster mRNA for putative mitoc...    37   2.1
CP000963_116(CP000963|pid:none) Clostridium botulinum A3 str. Lo...    37   2.1
FM992694_344(FM992694|pid:none) Candida dubliniensis CD36 chromo...    37   2.1
(P91927) RecName: Full=LETM1 and EF-hand domain-containing prote...    37   2.1
AB429345_1(AB429345|pid:none) Bruguiera gymnorhiza mRNA for hypo...    37   2.1
AK220405_1(AK220405|pid:none) Mus musculus mRNA for mKIAA1598 pr...    37   2.1
EZ000145_1(EZ000145|pid:none) TSA: Schistosoma japonicum SJCHGC0...    36   2.7
D30788_1(D30788|pid:none) Schizosaccharomyces pombe gene for cut...    36   2.7
(Q54G05) RecName: Full=Putative leucine-rich repeat-containing p...    36   2.7
CP000679_1519(CP000679|pid:none) Caldicellulosiruptor saccharoly...    36   2.7
AM910986_171(AM910986|pid:none) Plasmodium knowlesi strain H chr...    36   2.7
CP001072_557(CP001072|pid:none) Helicobacter pylori Shi470, comp...    36   2.7
(B5Z7E8) RecName: Full=Protein translocase subunit secA;  &CP001...    36   2.7
DQ321780_1(DQ321780|pid:none) Trichomonas vaginalis strain NIH-C...    36   2.7
CP000698_3828(CP000698|pid:none) Geobacter uraniireducens Rf4, c...    36   2.7
(Q26519) Tropomyosin.  &L76203_1(L76203|pid:none)                      36   2.7
(P41004) RecName: Full=Structural maintenance of chromosomes pro...    36   2.7
AY915779_1(AY915779|pid:none) Schistosoma japonicum SJCHGC09702 ...    36   2.7
CP001078_1122(CP001078|pid:none) Clostridium botulinum E3 str. A...    36   2.7
AC146681_1(AC146681|pid:none) Medicago truncatula clone mth2-77o...    36   3.5
CP000143_82(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 chr...    36   3.5
EF568108_62(EF568108|pid:none) Glossina pallidipes salivary glan...    36   3.5
CP000947_573(CP000947|pid:none) Haemophilus somnus 2336, complet...    36   3.5
AC133341_26(AC133341|pid:none) Medicago truncatula clone mth2-28...    36   3.5
AP008209_2418(AP008209|pid:none) Oryza sativa (japonica cultivar...    36   3.5
AJ248284_61(AJ248284|pid:none) Pyrococcus abyssi complete genome...    36   3.5
AF335500_1(AF335500|pid:none) Physarum polycephalum major plasmo...    36   3.5
AE017333_4047(AE017333|pid:none) Bacillus licheniformis DSM 13, ...    36   3.5
AP007155_376(AP007155|pid:none) Aspergillus oryzae RIB40 genomic...    36   3.5
AX887961_1(AX887961|pid:none) Sequence 3824 from Patent EP1033401.     36   3.5
(P13830) RecName: Full=Ring-infected erythrocyte surface antigen...    36   3.5
CP001291_1331(CP001291|pid:none) Cyanothece sp. PCC 7424, comple...    36   3.5
AM910996_691(AM910996|pid:none) Plasmodium knowlesi strain H chr...    36   3.5
CP001150_2900(CP001150|pid:none) Rhodobacter sphaeroides KD131 c...    36   3.5
BC055840_1(BC055840|pid:none) Mus musculus inner membrane protei...    36   3.5
AJ493427_1(AJ493427|pid:none) Plasmodium falciparum partial mRNA...    35   4.6
(A0MZ67) RecName: Full=Shootin-1;  &EF055488_1(EF055488|pid:none)      35   4.6
(Q6PIM5) RecName: Full=Shootin-1;  &AB384620_1(AB384620|pid:none)      35   4.6
(A8MZA4) RecName: Full=Putative golgin subfamily A member 6-like...    35   4.6
CR749417_1(CR749417|pid:none) Homo sapiens mRNA; cDNA DKFZp686A0...    35   4.6
AE014186_475(AE014186|pid:none) Plasmodium falciparum 3D7 chromo...    35   4.6
CP000825_818(CP000825|pid:none) Prochlorococcus marinus str. MIT...    35   4.6
AY042084_3(AY042084|pid:none) Plasmodium falciparum erythrocyte ...    35   4.6
(Q5RA03) RecName: Full=Shootin-1;                                      35   4.6
(O29107) RecName: Full=Uncharacterized protein AF_1158;  &AE0007...    35   4.6
AM483892_1(AM483892|pid:none) Vitis vinifera contig VV78X197160....    35   4.6
AK095703_1(AK095703|pid:none) Homo sapiens cDNA FLJ38384 fis, cl...    35   4.6
EU624449_1(EU624449|pid:none) Streptococcus pyogenes strain Sp3 ...    35   6.0
AF222860_1(AF222860|pid:none) Streptococcus pyogenes M protein p...    35   6.0
AJ242745_1(AJ242745|pid:none) Trypanosoma brucei ML gene for ML ...    35   6.0
S03166(S03166;A27066;A26045;A36604;A43298) myosin heavy chain, g...    35   6.0
AM260522_815(AM260522|pid:none) Helicobacter acinonychis str. Sh...    35   6.0
BT067264_1(BT067264|pid:none) Zea mays full-length cDNA clone ZM...    35   6.0
EU953572_1(EU953572|pid:none) Zea mays clone 1436272 unknown mRNA.     35   6.0
(Q17XE2) RecName: Full=Protein translocase subunit secA;               35   6.0
AF499596_28(AF499596|pid:none) Phthorimaea operculella granulovi...    35   6.0
CP000939_2421(CP000939|pid:none) Clostridium botulinum B1 str. O...    35   6.0
AJ871361_1(AJ871361|pid:none) Nyctotherus ovalis partial gene fo...    35   6.0
(O36023) RecName: Full=Septin homolog spn1;  &CU329670_2005(CU32...    35   7.9
CP001108_206(CP001108|pid:none) Prosthecochloris aestuarii DSM 2...    35   7.9
AP006841_3506(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,...    35   7.9
T26569(T26569)hypothetical protein Y26D4A.9 - Caenorhabditis ele...    35   7.9
AM910991_454(AM910991|pid:none) Plasmodium knowlesi strain H chr...    35   7.9
CP001638_2727(CP001638|pid:none) Geobacillus sp. WCH70, complete...    35   7.9
CP001291_1983(CP001291|pid:none) Cyanothece sp. PCC 7424, comple...    35   7.9
T38815(T38815)septin homolog spn1 - fission yeast (Schizosacchar...    35   7.9
AL031745_13(AL031745|pid:none) Plasmodium falciparum DNA from MA...    35   7.9
AC159405_42(AC159405|pid:none) Trypanosoma brucei chromosome 8 c...    35   7.9
EU016592_31(EU016592|pid:none) Uncultured Group I marine crenarc...    35   7.9
(Q09725) RecName: Full=Sister chromatid cohesion protein mis4; A...    35   7.9
CP000348_1495(CP000348|pid:none) Leptospira borgpetersenii serov...    35   7.9
AM910996_220(AM910996|pid:none) Plasmodium knowlesi strain H chr...    35   7.9
CP000937_312(CP000937|pid:none) Francisella philomiragia subsp. ...    35   7.9
(Q91ZU6) RecName: Full=Bullous pemphigoid antigen 1, isoforms 1/...    35   7.9
CP000053_269(CP000053|pid:none) Rickettsia felis URRWXCal2, comp...    35   7.9
AF206632_1(AF206632|pid:none) Plasmodium falciparum isolate FCC1...    35   7.9
AF023665_1(AF023665|pid:none) Plasmodium falciparum protein phos...    35   7.9

>AE014185_74(AE014185|pid:none) Plasmodium falciparum 3D7 chromosome
            10, complete sequence.  &AE014830_18(AE014830|pid:none)
          Length = 1073

 Score = 53.9 bits (128), Expect = 1e-05
 Identities = 57/247 (23%), Positives = 119/247 (48%), Gaps = 9/247 (3%)
 Frame = +2

Query: 383  EEKVENVLKKFEEQYLEKVEKLISENM-KLKVDFDK-LINGKDDELKRVEEEIREKYRSS 556
            ++K +  +K+F  + L+K EK++ EN  K K  F K L+N K++EL++ + +I+++Y+
Sbjct: 755  QKKYQKYIKRFLLKKLKKDEKILKENYEKEKEKFQKYLMNIKNEELEKEKNKIQQQYKLL 814

Query: 557  LDAAIXXXXXXXXXXXXXMDXXXXIKQSELEKRAITQLTQCIVDLQK-LLHDKSAIDGAN 733
             +                 D      +++     I+ +   +V+LQ  ++HD S
Sbjct: 815  QENYFKKMNIYISHINNIKDIFTNEIKNKFNLENISNIQNKLVNLQNCIIHDISI----- 869

Query: 734  GKGLLVRSFKNLTDLSNYDQLIKELLSTLPEGFEK---KPVIPLDTLNNQFQDIAKKLRK 904
             + +L+   K+L      D  + +L   LP+ F     KP    + L  +F  + ++  +
Sbjct: 870  -EHILIELKKDL----QKDIYLNKLFQILPKNFFSHIFKPTNNNEKLKKEFYSLYEECVQ 924

Query: 905  SQLIDPNDN---SLLGKAVSELASLFIIPEKGMVQGNDYDAILARAEDHLRKNNLSSAIK 1075
               ++ +DN    +LGK +S   S++I  E  +     ++ ++  +++++ KNNL +
Sbjct: 925  QAFLNKDDNYFKQILGKMMS---SIYIKYESTL-----HNILIRSSKNNILKNNLLNLSY 976

Query: 1076 EMESIQQ 1096
             + SIQQ
Sbjct: 977  ALSSIQQ 983

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,478,687,498
Number of extensions: 24162684
Number of successful extensions: 80980
Number of sequences better than 10.0: 131
Number of HSP's gapped: 80626
Number of HSP's successfully gapped: 142
Length of query: 439
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 307
Effective length of database: 623,955,076
Effective search space: 191554208332
Effective search space used: 191554208332
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.75  gvh: 0.40  alm: 0.39  top: 0.53  tms: 0.00  mit: 0.21  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 64.0 %: cytoplasmic
	 28.0 %: nuclear
	  4.0 %: cytoskeletal
	  4.0 %: vesicles of secretory system

>> prediction for Contig-U02167-1 is cyt
VS (DIR, S) 2
VH (FL, L) 0
VF (FL, S) 1
AH (FL, L) 0
AF (FL, S) 1
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0