Contig-U13304-1
Contig ID Contig-U13304-1
Contig update 2002.12.18
Contig sequence
>Contig-U13304-1 (Contig-U13304-1Q) /CSM_Contig/Contig-U13304-1Q.Seq.d
ATTTTATTATGCAGGAATTTTAAAGAAATCACCATCAATGGAAATTTTTA
AAGATGTTAAAATTGTTGATTTCTCATTATGTGAAATAAATGATACATTA
AAAGATGTTTTCTTACCAACAACTTATTCAACAAATAATTTATATTTTGA
AAACAATAAATTATATGGTTTAATTCCTCAATCATACTGTAATGTAATTA
CAGATTTTAGCGATAATACTTTAACTGGTGAAATTCCAAATTGTTTCACG
TGTTATTTTAATGATACTGATTCTTTAGTGAAAAATAAATTTGCAAATAA
TAAATTCACAAATTATGCGACCCAAGGTCCTTGTACAACAATGAAACCAA
ATTTATTAGTTAATGCTACAACTTTAATATTATATGGTGAATCTTTAGGT
TTTAATGGTAGACTTATAAAAACAAATGCAACAGGTTCAACAACTTTTAC
AATGATACAACCAAGTAGTTATTTTACATTAAATTTAAGAACAACAAATA
TATTTGCAAAAGGTGCAAGATCATTAATACTCACTTGGACAGTTGGTAGC
GAAATTAGAAAATTCACATTACCAATTGTTAAACAAGCACCTGTACCTGC
AAATATTACTTACAGTGGTATTGCATCGAATCAAGTCGAAATAAATGGTG
AATTCTTTACATACAACATTACAGATGTTTCGGTTTTAGTAAGTGGTAAT
GATTGTCTTGTAACTTATACAACATTCAACCAAATCAAATGTACATTAAC
AAAAGGTTTAAATGAAAGTATTGTATTACCAGTTGATTTTATTTTTGTTG
ACATTATTGTAGGTGGAAACAAAACAAGTGTTTATGTTAGATTACAAGAA
ACATCATATATAAACAATAAAAAGTGTAACCCTGAACTATGTACTTCCAA
TACATATTGTAATTTAAATGATGGAATTTGCTATCCACATTTAGATTGTA
TTTCAGATTGTACAATAAACAATGCAGTTTGTAATCATGTTAGTGGGTTG
TGTGATTGTAGGAATAATTGTAGTAATGCAGGTTTATGCAATGGTGTAGA
TGGTACTTGTTCGTGTAATTCTGGTAGATTATTCAACGATTGCAGTGGTA
TTCAATGTACAGGTACACCAATTTGTTCAAATCATGGTACTTGTGATACC
TCAAACGGAAAATGTAAATGTGAATCAATTATATGGGTTGGCAATGCATG
TCAAGATACTCAACATTATGTAAATGCAATTACACCATCAAATGAAAATG
GTGGTAAAGTTTTATTATTTGGTTGGTTTGGTTCAACTCATTCAAATGCA
TCAGTAATAATTGGCTCACAAGAATGTAATATAACTTCAATAAATCAAAC
TGTNATAGAATGNGATATTGGNNATGGAAA

Gap no gap
Contig length 1380
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 2584424
End point 2585803
Strand (PLUS/MINUS) PLUS
Number of clones 3
Number of EST 3
Link to clone list U13304
List of clone(s)

est1=VFI823Z,1,693
est2=SHL331Z,544,1069
est3=VFL282F,838,1380
Translated Amino Acid sequence
FYYAGILKKSPSMEIFKDVKIVDFSLCEINDTLKDVFLPTTYSTNNLYFENNKLYGLIPQ
SYCNVITDFSDNTLTGEIPNCFTCYFNDTDSLVKNKFANNKFTNYATQGPCTTMKPNLLV
NATTLILYGESLGFNGRLIKTNATGSTTFTMIQPSSYFTLNLRTTNIFAKGARSLILTWT
VGSEIRKFTLPIVKQAPVPANITYSGIASNQVEINGEFFTYNITDVSVLVSGNDCLVTYT
TFNQIKCTLTKGLNESIVLPVDFIFVDIIVGGNKTSVYVRLQETSYINNKKCNPELCTSN
TYCNLNDGICYPHLDCISDCTINNAVCNHVSGLCDCRNNCSNAGLCNGVDGTCSCNSGRL
FNDCSGIQCTGTPICSNHGTCDTSNGKCKCESIIWVGNACQDTQHYVNAITPSNENGGKV
LLFGWFGSTHSNASVIIGSQECNITSINQTVIEXDIGXG


Translated Amino Acid sequence (All Frames)
Frame A:
illcrnfkeitingnf*rc*nc*flim*nk*yikrcfltnnlfnk*fif*kq*iiwfnss
iil*cnyrf*r*yfnw*nsklfhvlf**y*ffsek*ick**ihklcdprslynnetkfis
*cynfniiw*ifrf*w*tyknkcnrfnnfyndttk*lfyikfknnkyickrckiinthld
sw*rn*kihitnc*tstctckyylqwyciessrnkw*ilyiqhyrcfgfskw**lscnly
niqpnqmyinkrfk*kycits*fyfc*hycrwkqnkclc*itrniiykq*kv*p*tmyfq
yil*fk*wnllstfrlyfrlynkqcsl*sc*wvv*l*e*l**crfmqwcrwylfv*fw*i
iqrlqwysmyrytnlfkswyl*ylkrkm*m*inymgwqcmsrystlckcnytik*kww*s
fiiwlvwfnsfkcisnnwltrm*ynfnksncxrmxywxwk


Frame B:
FYYAGILKKSPSMEIFKDVKIVDFSLCEINDTLKDVFLPTTYSTNNLYFENNKLYGLIPQ
SYCNVITDFSDNTLTGEIPNCFTCYFNDTDSLVKNKFANNKFTNYATQGPCTTMKPNLLV
NATTLILYGESLGFNGRLIKTNATGSTTFTMIQPSSYFTLNLRTTNIFAKGARSLILTWT
VGSEIRKFTLPIVKQAPVPANITYSGIASNQVEINGEFFTYNITDVSVLVSGNDCLVTYT
TFNQIKCTLTKGLNESIVLPVDFIFVDIIVGGNKTSVYVRLQETSYINNKKCNPELCTSN
TYCNLNDGICYPHLDCISDCTINNAVCNHVSGLCDCRNNCSNAGLCNGVDGTCSCNSGRL
FNDCSGIQCTGTPICSNHGTCDTSNGKCKCESIIWVGNACQDTQHYVNAITPSNENGGKV
LLFGWFGSTHSNASVIIGSQECNITSINQTVIEXDIGXG


Frame C:
fimqef*rnhhqwkflkmlkllishyvk*mih*kmfsyqqliqqiiyilktinymv*fln
htvm*lqilaiil*lvkfqivsrvilmilil**kinlqiinsqimrpkvlvqq*nqiy*l
mlql*yymvnl*vlmvdl*kqmqqvqqllq*ynqvvilh*i*eqqiylqkvqdh*yslgq
lvaklenshyqllnkhlylqilltvvlhriksk*mvnslhttlqmfrf**vvmivl*liq
hstksnvh*qkv*mkvlyyqlilflltll*vetkqvfmldykkhhi*tiksvtlnyvlpi
hivi*mmefaihi*ivfqivq*tmqfvimlvgcvivgiivvmqvyamv*mvlvrvilvdy
stiavvfnvqvhqfvqimvlvipqtenvnvnqlyglamhvkilnim*mqlhhqmkmvvkf
yylvglvqliqmhq**lahknvi*lq*iklx*nxilxme


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U13304-1 (Contig-U13304-1Q)
/CSM_Contig/Contig-U13304-1Q.Seq.d
(1380 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U13304-1 (Contig-U13304-1Q) /CSM_Contig/Conti... 2712 0.0
Contig-U03836-1 (Contig-U03836-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U12673-1 (Contig-U12673-1Q) /CSM_Contig/Conti... 38 0.025
Contig-U12381-1 (Contig-U12381-1Q) /CSM_Contig/Conti... 38 0.025
Contig-U14638-1 (Contig-U14638-1Q) /CSM_Contig/Conti... 36 0.098
Contig-U13176-1 (Contig-U13176-1Q) /CSM_Contig/Conti... 36 0.098

>Contig-U13304-1 (Contig-U13304-1Q) /CSM_Contig/Contig-U13304-1Q.Seq.d
Length = 1380

Score = 2712 bits (1368), Expect = 0.0
Identities = 1380/1380 (100%)
Strand = Plus / Plus


Query: 1 attttattatgcaggaattttaaagaaatcaccatcaatggaaatttttaaagatgttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attttattatgcaggaattttaaagaaatcaccatcaatggaaatttttaaagatgttaa 60


Query: 61 aattgttgatttctcattatgtgaaataaatgatacattaaaagatgttttcttaccaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aattgttgatttctcattatgtgaaataaatgatacattaaaagatgttttcttaccaac 120


Query: 121 aacttattcaacaaataatttatattttgaaaacaataaattatatggtttaattcctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aacttattcaacaaataatttatattttgaaaacaataaattatatggtttaattcctca 180


Query: 181 atcatactgtaatgtaattacagattttagcgataatactttaactggtgaaattccaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcatactgtaatgtaattacagattttagcgataatactttaactggtgaaattccaaa 240


Query: 241 ttgtttcacgtgttattttaatgatactgattctttagtgaaaaataaatttgcaaataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgtttcacgtgttattttaatgatactgattctttagtgaaaaataaatttgcaaataa 300


Query: 301 taaattcacaaattatgcgacccaaggtccttgtacaacaatgaaaccaaatttattagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taaattcacaaattatgcgacccaaggtccttgtacaacaatgaaaccaaatttattagt 360


Query: 361 taatgctacaactttaatattatatggtgaatctttaggttttaatggtagacttataaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taatgctacaactttaatattatatggtgaatctttaggttttaatggtagacttataaa 420


Query: 421 aacaaatgcaacaggttcaacaacttttacaatgatacaaccaagtagttattttacatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aacaaatgcaacaggttcaacaacttttacaatgatacaaccaagtagttattttacatt 480


Query: 481 aaatttaagaacaacaaatatatttgcaaaaggtgcaagatcattaatactcacttggac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaatttaagaacaacaaatatatttgcaaaaggtgcaagatcattaatactcacttggac 540


Query: 541 agttggtagcgaaattagaaaattcacattaccaattgttaaacaagcacctgtacctgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agttggtagcgaaattagaaaattcacattaccaattgttaaacaagcacctgtacctgc 600


Query: 601 aaatattacttacagtggtattgcatcgaatcaagtcgaaataaatggtgaattctttac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaatattacttacagtggtattgcatcgaatcaagtcgaaataaatggtgaattctttac 660


Query: 661 atacaacattacagatgtttcggttttagtaagtggtaatgattgtcttgtaacttatac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atacaacattacagatgtttcggttttagtaagtggtaatgattgtcttgtaacttatac 720


Query: 721 aacattcaaccaaatcaaatgtacattaacaaaaggtttaaatgaaagtattgtattacc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aacattcaaccaaatcaaatgtacattaacaaaaggtttaaatgaaagtattgtattacc 780


Query: 781 agttgattttatttttgttgacattattgtaggtggaaacaaaacaagtgtttatgttag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 agttgattttatttttgttgacattattgtaggtggaaacaaaacaagtgtttatgttag 840


Query: 841 attacaagaaacatcatatataaacaataaaaagtgtaaccctgaactatgtacttccaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 attacaagaaacatcatatataaacaataaaaagtgtaaccctgaactatgtacttccaa 900


Query: 901 tacatattgtaatttaaatgatggaatttgctatccacatttagattgtatttcagattg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 tacatattgtaatttaaatgatggaatttgctatccacatttagattgtatttcagattg 960


Query: 961 tacaataaacaatgcagtttgtaatcatgttagtgggttgtgtgattgtaggaataattg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 tacaataaacaatgcagtttgtaatcatgttagtgggttgtgtgattgtaggaataattg 1020


Query: 1021 tagtaatgcaggtttatgcaatggtgtagatggtacttgttcgtgtaattctggtagatt 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tagtaatgcaggtttatgcaatggtgtagatggtacttgttcgtgtaattctggtagatt 1080


Query: 1081 attcaacgattgcagtggtattcaatgtacaggtacaccaatttgttcaaatcatggtac 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 attcaacgattgcagtggtattcaatgtacaggtacaccaatttgttcaaatcatggtac 1140


Query: 1141 ttgtgatacctcaaacggaaaatgtaaatgtgaatcaattatatgggttggcaatgcatg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ttgtgatacctcaaacggaaaatgtaaatgtgaatcaattatatgggttggcaatgcatg 1200


Query: 1201 tcaagatactcaacattatgtaaatgcaattacaccatcaaatgaaaatggtggtaaagt 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 tcaagatactcaacattatgtaaatgcaattacaccatcaaatgaaaatggtggtaaagt 1260


Query: 1261 tttattatttggttggtttggttcaactcattcaaatgcatcagtaataattggctcaca 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 tttattatttggttggtttggttcaactcattcaaatgcatcagtaataattggctcaca 1320


Query: 1321 agaatgtaatataacttcaataaatcaaactgtnatagaatgngatattggnnatggaaa 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 agaatgtaatataacttcaataaatcaaactgtnatagaatgngatattggnnatggaaa 1380


>Contig-U03836-1 (Contig-U03836-1Q) /CSM_Contig/Contig-U03836-1Q.Seq.d
Length = 1177

Score = 40.1 bits (20), Expect = 0.006
Identities = 23/24 (95%)
Strand = Plus / Minus


Query: 1221 taaatgcaattacaccatcaaatg 1244
||||| ||||||||||||||||||
Sbjct: 367 taaatccaattacaccatcaaatg 344


>Contig-U12673-1 (Contig-U12673-1Q) /CSM_Contig/Contig-U12673-1Q.Seq.d
Length = 2561

Score = 38.2 bits (19), Expect = 0.025
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 124 ttattcaacaaataattta 142
|||||||||||||||||||
Sbjct: 241 ttattcaacaaataattta 259


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 24,523
Number of Sequences: 6905
Number of extensions: 24523
Number of successful extensions: 2450
Number of sequences better than 10.0: 280
length of query: 1380
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1364
effective length of database: 5,564,391
effective search space: 7589829324
effective search space used: 7589829324
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.12. 7
Homology vs DNA
Query= Contig-U13304-1 (Contig-U13304-1Q) /CSM_Contig/Contig-U13304-1Q.Seq.d
(1380 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ432267) Dictyostelium discoideum cDNA clone:ddv18n06, 3' ... 1374 0.0 1
(BJ415794) Dictyostelium discoideum cDNA clone:ddv23c22, 5' ... 1019 0.0 1
(BJ408623) Dictyostelium discoideum cDNA clone:dds46n07, 3' ... 918 0.0 2
(AF474339) Dictyostelium discoideum ABC transporter ABCC.7 (... 44 0.003 2
(EJ826340) 1093017562115 Global-Ocean-Sampling_GS-30-02-01-1... 42 0.013 3
(EJ883970) 1093018408159 Global-Ocean-Sampling_GS-30-02-01-1... 42 0.013 3
(CR391931) Zebrafish DNA sequence from clone DKEY-267P8 in l... 36 0.037 2
(EK353723) 1095468277788 Global-Ocean-Sampling_GS-31-01-01-1... 52 0.057 1
(BQ720435) AGENCOURT_8291328 Lupski_sympathetic_trunk Homo s... 50 0.093 2
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 44 0.12 13
(AL137072) Human DNA sequence from clone RP11-29B11 on chrom... 50 0.23 1
(AC074343) Homo sapiens chromosome 9 clone RP11-124M17, WORK... 50 0.23 1
(EJ688254) 1092955217495 Global-Ocean-Sampling_GS-30-02-01-1... 46 0.28 2
(AC211988) Macaca mulatta BAC CH250-151B18 (Children's Hosp... 42 0.30 9
(AC002422) Human Chromosome X, complete sequence. 34 0.34 6
(EJ725230) 1092959493530 Global-Ocean-Sampling_GS-30-02-01-1... 46 0.35 2
(AE001437) Clostridium acetobutylicum ATCC 824, complete gen... 36 0.48 24
(AC143029) Macaca mulatta clone CH250-267C6, WORKING DRAFT S... 42 0.55 5
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 34 0.62 19
(AL034558) Plasmodium falciparum MAL3P2. 32 0.62 13
(AC006527) Arabidopsis thaliana chromosome 2 clone F27C21 ma... 38 0.72 5
(AC113059) Mus musculus chromosome 10, clone RP23-255F14, co... 48 0.89 1
(AC021709) Mus musculus chromosome 10, clone RP23-194I3, com... 48 0.89 1
(AC185978) Pan troglodytes BAC clone CH251-508B17 from chrom... 48 0.89 1
(AC079749) Homo sapiens BAC clone RP11-16N13 from 4, complet... 48 0.89 1
(AC162388) Mus musculus clone RP24-213N18, WORKING DRAFT SEQ... 48 0.89 1
(AC148029) Homo sapiens chromosome UNK clone RP13-1010I18, *... 48 0.89 1
(AC147569) Homo sapiens chromosome UNK clone RP13-959D14, WO... 48 0.89 1
(AC147071) Homo sapiens chromosome UNK clone RP13-901L7, ***... 48 0.89 1
(AC109242) Mus musculus chromosome 10 clone RP23-140E15 map ... 48 0.89 1
(AC222533) Procavia capensis clone CH280-156F22, WORKING DRA... 48 0.89 1
(AC016087) Homo sapiens clone RP11-24K13, *** SEQUENCING IN ... 48 0.89 1
(AC009791) Homo sapiens chromosome 4 clone 165_D_10 map 4, *... 48 0.89 1
(AQ826666) HS_5300_A2_A05_T7A RPCI-11 Human Male BAC Library... 48 0.89 1
(ED236029) AUAC-aan67d01.b1 Ascaris suum whole genome shotgu... 48 0.89 1
(DE174196) Bombyx mori genomic DNA, Fosmid clone:RO0324-G18_F. 48 0.89 1
(BY930258) Bombyx mori cDNA, clone:E_EL_ovS0_07G04_R_0, 3' e... 48 0.89 1
(AL359922) Human DNA sequence from clone RP11-70L8 on chromo... 42 0.91 4
(CP000016) Candidatus Blochmannia pennsylvanicus str. BPEN, ... 38 0.94 17
(BH425580) BOHLQ93TF BOHL Brassica oleracea genomic clone BO... 38 0.95 2
(CU302332) Medicago truncatula chromosome 5 clone mth2-139e1... 40 1.00 9
(AM285307) Spiroplasma citri GII3-3X chromosome, contig Cont... 38 1.0 9
(AC119581) Rattus norvegicus clone CH230-371D11, *** SEQUENC... 34 1.1 8
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 40 1.2 17
(CP000770) Candidatus Sulcia muelleri GWSS, complete genome. 32 1.3 12
(AC011090) Homo sapiens chromosome 17, clone CTD-2005K23, co... 42 1.6 2
(AC146861) Medicago truncatula clone mth2-31p22, complete se... 38 1.6 5
(AC109911) Rattus norvegicus clone CH230-57A21, *** SEQUENCI... 34 1.8 2
(AC106423) Rattus norvegicus clone CH230-144H16, *** SEQUENC... 34 1.8 2
(CU576531) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 1.8 5
(CP000102) Methanosphaera stadtmanae DSM 3091, complete genome. 34 1.9 23
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 36 2.0 19
(CR382400) Plasmodium falciparum chromosome 6, complete sequ... 38 2.0 11
(AL512655) Human DNA sequence from clone RP11-536C2 on chrom... 42 2.0 8
(AC210370) Solanum lycopersicum chromosome 7 clone C07SLm004... 38 2.0 5
(AC112777) Homo sapiens 12 BAC RP11-424C20 (Roswell Park Can... 36 2.1 7
(DD000828) PLANT ARTIFICIAL CHROMOSOME COMPOSITIONS AND METH... 38 2.4 5
(AX059513) Sequence 246 from Patent WO0055325. 38 2.4 5
(CU326365) Zebrafish DNA sequence from clone DKEY-176K10 in ... 34 2.4 8
(AP001296) Arabidopsis thaliana genomic DNA, chromosome 3, B... 40 2.5 2
(CU468284) Zebrafish DNA sequence from clone CH73-111A8 in l... 36 2.8 5
(AM446849) Vitis vinifera contig VV78X000094.4, whole genome... 40 2.9 3
(AC150706) Medicago truncatula clone mth2-132l18, complete s... 34 3.1 8
(AL591771) Human chromosome 14 DNA sequence BAC R-727C22 of ... 42 3.2 9
(DC215800) Plasmodium berghei strain ANKA cDNA clone:MG01818... 38 3.4 2
(AC187645) Glycine max clone gmp1-49d18, complete sequence. 42 3.4 10
(AC117442) Homo sapiens chromosome 3 clone RP11-475K16, *** ... 34 3.4 7
(EF506945) Leptosira terrestris UTEX 333 chloroplast, comple... 34 3.5 13
(AC167190) Mus musculus chromosome 1, clone wi1-784K1, compl... 46 3.5 1
(AC154234) Mus musculus BAC clone RP24-345H5 from 16, comple... 46 3.5 1
(AC121303) Mus musculus chromosome 8, clone RP23-335A5, comp... 46 3.5 1
(AC119275) Mus musculus chromosome 8, clone RP24-459A4, comp... 46 3.5 1
(AC114400) Homo sapiens chromosome 3 clone CTD-2185K10, comp... 46 3.5 1
(AC104300) Homo sapiens chromosome 3 clone RP11-147N17, comp... 46 3.5 1
(AC162081) Bos taurus clone CH240-110F14, WORKING DRAFT SEQU... 46 3.5 1
(AC156656) Bos taurus clone CH240-63N2, WORKING DRAFT SEQUEN... 46 3.5 1
(AC151442) Atelerix albiventris clone LB4-211A8, WORKING DRA... 46 3.5 1
(AC119955) Mus musculus clone RP24-464G17, LOW-PASS SEQUENCE... 46 3.5 1
(CU928248) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.5 1
(CU655918) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.5 1
(CU618341) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.5 1
(CU469152) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.5 1
(CU468595) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.5 1
(AC016929) Homo sapiens chromosome 3 clone RP11-93F18, *** S... 46 3.5 1
(AZ337981) 1M0068D24R Mouse 10kb plasmid UUGC1M library Mus ... 46 3.5 1
(ER584044) 1093015857655 Global-Ocean-Sampling_GS-36-01-01-2... 46 3.5 1
(EK263047) 1095462190001 Global-Ocean-Sampling_GS-31-01-01-1... 46 3.5 1
(EK223424) 1095460149128 Global-Ocean-Sampling_GS-31-01-01-1... 46 3.5 1
(EJ869709) 1093018340468 Global-Ocean-Sampling_GS-30-02-01-1... 46 3.5 1
(EJ782980) 1093017289660 Global-Ocean-Sampling_GS-30-02-01-1... 46 3.5 1
(EJ494368) 1095403562807 Global-Ocean-Sampling_GS-28-01-01-1... 46 3.5 1
(EJ451470) 1093015427073 Global-Ocean-Sampling_GS-28-01-01-1... 46 3.5 1
(EJ038490) 1095454082623 Global-Ocean-Sampling_GS-26-01-01-1... 46 3.5 1
(ED114810) AUAC-aal61h11.g1 Ascaris suum whole genome shotgu... 46 3.5 1
(DE223256) Trifolium pratense DNA, clone:RCG14884. 46 3.5 1
(DE216148) Trifolium pratense DNA, clone:RCG05504. 46 3.5 1
(CC318074) TAM32-23M22_EC1.1 TAM32 Gallus gallus genomic clo... 46 3.5 1
(DB905949) Populus nigra mRNA, clone: PnFL2-074_H16, 3'end. 46 3.5 1
(DB901503) Populus nigra mRNA, clone: PnFL2-050_B15, 3'end. 46 3.5 1
(CX182523) G07_45-114_13.ab1 leaf inoculated with Marssonia ... 46 3.5 1

>(BJ432267) Dictyostelium discoideum cDNA clone:ddv18n06, 3' end,
single read.
Length = 693

Score = 1374 bits (693), Expect = 0.0
Identities = 693/693 (100%)
Strand = Plus / Minus


Query: 1 attttattatgcaggaattttaaagaaatcaccatcaatggaaatttttaaagatgttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 attttattatgcaggaattttaaagaaatcaccatcaatggaaatttttaaagatgttaa 634


Query: 61 aattgttgatttctcattatgtgaaataaatgatacattaaaagatgttttcttaccaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 aattgttgatttctcattatgtgaaataaatgatacattaaaagatgttttcttaccaac 574


Query: 121 aacttattcaacaaataatttatattttgaaaacaataaattatatggtttaattcctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 aacttattcaacaaataatttatattttgaaaacaataaattatatggtttaattcctca 514


Query: 181 atcatactgtaatgtaattacagattttagcgataatactttaactggtgaaattccaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 atcatactgtaatgtaattacagattttagcgataatactttaactggtgaaattccaaa 454


Query: 241 ttgtttcacgtgttattttaatgatactgattctttagtgaaaaataaatttgcaaataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ttgtttcacgtgttattttaatgatactgattctttagtgaaaaataaatttgcaaataa 394


Query: 301 taaattcacaaattatgcgacccaaggtccttgtacaacaatgaaaccaaatttattagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 taaattcacaaattatgcgacccaaggtccttgtacaacaatgaaaccaaatttattagt 334


Query: 361 taatgctacaactttaatattatatggtgaatctttaggttttaatggtagacttataaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 taatgctacaactttaatattatatggtgaatctttaggttttaatggtagacttataaa 274


Query: 421 aacaaatgcaacaggttcaacaacttttacaatgatacaaccaagtagttattttacatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aacaaatgcaacaggttcaacaacttttacaatgatacaaccaagtagttattttacatt 214


Query: 481 aaatttaagaacaacaaatatatttgcaaaaggtgcaagatcattaatactcacttggac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 aaatttaagaacaacaaatatatttgcaaaaggtgcaagatcattaatactcacttggac 154


Query: 541 agttggtagcgaaattagaaaattcacattaccaattgttaaacaagcacctgtacctgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 agttggtagcgaaattagaaaattcacattaccaattgttaaacaagcacctgtacctgc 94


Query: 601 aaatattacttacagtggtattgcatcgaatcaagtcgaaataaatggtgaattctttac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 aaatattacttacagtggtattgcatcgaatcaagtcgaaataaatggtgaattctttac 34


Query: 661 atacaacattacagatgtttcggttttagtaag 693
|||||||||||||||||||||||||||||||||
Sbjct: 33 atacaacattacagatgtttcggttttagtaag 1

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,814,423,177
Number of extensions: 117358705
Number of successful extensions: 9516261
Number of sequences better than 10.0: 159
Length of query: 1380
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1356
Effective length of database: 97,308,875,965
Effective search space: 131950835808540
Effective search space used: 131950835808540
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7. 6
Homology vs Protein
Query= Contig-U13304-1 (Contig-U13304-1Q) /CSM_Contig/Contig-U13304-1Q.Seq.d
(1380 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC116967_7(AC116967|pid:none) Dictyostelium discoideum chromosom... 176 1e-42
AC116920_25(AC116920|pid:none) Dictyostelium discoideum chromoso... 166 1e-39
AC116960_61(AC116960|pid:none) Dictyostelium discoideum chromoso... 161 6e-38
AC117081_43(AC117081|pid:none) Dictyostelium discoideum chromoso... 160 1e-37
AC117081_39(AC117081|pid:none) Dictyostelium discoideum chromoso... 154 9e-36
AC116963_42(AC116963|pid:none) Dictyostelium discoideum chromoso... 147 1e-33
AC116967_8(AC116967|pid:none) Dictyostelium discoideum chromosom... 132 3e-29
AC116920_24(AC116920|pid:none) Dictyostelium discoideum chromoso... 115 4e-24
AC116956_34(AC116956|pid:none) Dictyostelium discoideum chromoso... 115 5e-24
AC117075_41(AC117075|pid:none) Dictyostelium discoideum chromoso... 110 2e-22
AC116982_41(AC116982|pid:none) Dictyostelium discoideum chromoso... 100 1e-19
AC116920_20(AC116920|pid:none) Dictyostelium discoideum chromoso... 90 2e-16
AC115598_37(AC115598|pid:none) Dictyostelium discoideum chromoso... 72 4e-11
AK122555_1(AK122555|pid:none) Mus musculus mRNA for mKIAA1781 pr... 67 2e-09
(Q80T91) RecName: Full=Multiple epidermal growth factor-like dom... 67 2e-09
AK051642_1(AK051642|pid:none) Mus musculus 12 days embryo spinal... 67 2e-09
AC116100_9(AC116100|pid:none) Dictyostelium discoideum chromosom... 67 2e-09
BC020198_1(BC020198|pid:none) Homo sapiens multiple EGF-like-dom... 65 4e-09
(Q96KG7) RecName: Full=Multiple epidermal growth factor-like dom... 65 4e-09
CR749437_1(CR749437|pid:none) Homo sapiens mRNA; cDNA DKFZp781K1... 65 4e-09
AK148084_1(AK148084|pid:none) Mus musculus B16 F10Y cells cDNA, ... 64 2e-08
AC117075_64(AC117075|pid:none) Dictyostelium discoideum chromoso... 63 2e-08
BX890618_1(BX890618|pid:none) Zebrafish DNA sequence from clone ... 61 1e-07
BX088690_1(BX088690|pid:none) Zebrafish DNA sequence from clone ... 61 1e-07
AB058677_1(AB058677|pid:none) Homo sapiens mRNA for MEGF11 prote... 60 2e-07
AB300051_1(AB300051|pid:none) Homo sapiens mRNA for MEGF11, comp... 60 2e-07
BC117419_1(BC117419|pid:none) Homo sapiens multiple EGF-like-dom... 60 2e-07
AL834326_1(AL834326|pid:none) Homo sapiens mRNA; cDNA DKFZp434L1... 60 2e-07
AL032657_4(AL032657|pid:none) Caenorhabditis elegans YAC Y47H9C,... 58 9e-07
X08030_1(X08030|pid:none) Chicken mRNA fragment for tenascin (cT... 57 1e-06
AL110498_8(AL110498|pid:none) Caenorhabditis elegans YAC Y64G10A... 57 1e-06
AC096673_18(AC096673|pid:none) Trypanosoma brucei chromosome 3 c... 57 2e-06
BC168665_1(BC168665|pid:none) Rattus norvegicus platelet endothe... 57 2e-06
AX817295_1(AX817295|pid:none) Sequence 43 from Patent WO02081517. 56 3e-06
AX817297_1(AX817297|pid:none) Sequence 45 from Patent WO02081517. 56 3e-06
(Q8VIK5) RecName: Full=Platelet endothelial aggregation receptor... 56 3e-06
AF461685_1(AF461685|pid:none) Mus musculus Jedi-736 protein mRNA... 56 3e-06
AF444274_1(AF444274|pid:none) Mus musculus Jedi protein mRNA, co... 56 3e-06
BC163556_1(BC163556|pid:none) Danio rerio tenascin C, mRNA (cDNA... 55 5e-06
AF008227_1(AF008227|pid:none) Drosophila melanogaster odd Oz pro... 55 5e-06
AE014296_3877(AE014296|pid:none) Drosophila melanogaster chromos... 55 5e-06
A54148(A54148)odz protein - fruit fly (Drosophila sp.) 55 5e-06
AE014296_3878(AE014296|pid:none) Drosophila melanogaster chromos... 55 5e-06
AE014296_356(AE014296|pid:none) Drosophila melanogaster chromoso... 55 6e-06
BC144305_1(BC144305|pid:none) Homo sapiens cDNA clone MGC:177842... 55 6e-06
AK127044_1(AK127044|pid:none) Homo sapiens cDNA FLJ45101 fis, cl... 55 6e-06
AL049689_1(AL049689|pid:none) Novel human mRNA from chromosome 1... 55 6e-06
(Q9UQP3) RecName: Full=Tenascin-N; Short=TN-N; Flags: P... 55 6e-06
BC146386_1(BC146386|pid:none) Synthetic construct Homo sapiens c... 55 8e-06
(O75095) RecName: Full=Multiple epidermal growth factor-like dom... 55 8e-06
AB011539_1(AB011539|pid:none) Homo sapiens mRNA for MEGF6 protei... 55 8e-06
EU596506_1(EU596506|pid:none) Rattus norvegicus tenascin C (Tnc)... 55 8e-06
(Q9W7R4) RecName: Full=Teneurin-3; Short=Ten-3; AltName... 54 1e-05
AL627123_1(AL627123|pid:none) Mouse DNA sequence from clone RP23... 54 1e-05
(Q80V70) RecName: Full=Multiple epidermal growth factor-like dom... 54 1e-05
AK134303_1(AK134303|pid:none) Mus musculus 13 days embryo male t... 54 1e-05
AK173032_1(AK173032|pid:none) Mus musculus mRNA for mKIAA0815 pr... 54 1e-05
BC058571_1(BC058571|pid:none) Mus musculus multiple EGF-like-dom... 54 1e-05
BX324137_1(BX324137|pid:none) Zebrafish DNA sequence from clone ... 54 1e-05
(Q9W6F8) RecName: Full=Wnt inhibitory factor 1; Short=W... 54 1e-05
BC154909_1(BC154909|pid:none) Xenopus tropicalis WNT inhibitory ... 54 1e-05
AC117075_42(AC117075|pid:none) Dictyostelium discoideum chromoso... 54 2e-05
J03641_1(J03641|pid:none) Chicken cytotactin mRNA, partial cds, ... 54 2e-05
AB052951_1(AB052951|pid:none) Homo sapiens mRNA for SRECRP-1, co... 53 2e-05
AF522196_1(AF522196|pid:none) Homo sapiens scavenger receptor ty... 53 2e-05
AC103550_20(AC103550|pid:none) Oryza sativa chromosome 3 BAC OSJ... 53 2e-05
T27283(T27283)hypothetical protein Y64G10A.f - Caenorhabditis el... 53 2e-05
AY286489_1(AY286489|pid:none) Danio rerio tenascin-R mRNA, compl... 53 3e-05
(Q9W6F9) RecName: Full=Wnt inhibitory factor 1; Short=W... 53 3e-05
(Q80YX1) RecName: Full=Tenascin; Short=TN; AltName: Ful... 52 4e-05
AK160406_1(AK160406|pid:none) Mus musculus adult male cerebellum... 52 4e-05
AL732556_3(AL732556|pid:none) Mouse DNA sequence from clone RP24... 52 4e-05
AL732556_1(AL732556|pid:none) Mouse DNA sequence from clone RP24... 52 4e-05
BC140783_1(BC140783|pid:none) Homo sapiens odz, odd Oz/ten-m hom... 52 5e-05
AF100772_1(AF100772|pid:none) Homo sapiens tenascin-M1 (TNM1) mR... 52 5e-05
BC144543_1(BC144543|pid:none) Homo sapiens odz, odd Oz/ten-m hom... 52 5e-05
(P59222) RecName: Full=Scavenger receptor class F member 2; AltN... 52 5e-05
BC091959_1(BC091959|pid:none) Danio rerio wnt inhibitory factor ... 52 7e-05
(Q8BYI9) RecName: Full=Tenascin-R; Short=TN-R; AltName:... 52 7e-05
FN357317_8(FN357317|pid:none) Schistosoma mansoni genome sequenc... 52 7e-05
(Q05546) RecName: Full=Tenascin-R; Short=TN-R; AltName:... 52 7e-05
BC132392_1(BC132392|pid:none) Mus musculus tenascin R, mRNA (cDN... 52 7e-05
AC116984_31(AC116984|pid:none) Dictyostelium discoideum chromoso... 51 9e-05
X68794_1(X68794|pid:none) Drosophila melanogaster mRNA for type ... 51 9e-05
BC146617_1(BC146617|pid:none) Xenopus tropicalis odz, odd Oz/ten... 51 9e-05
AB025413_1(AB025413|pid:none) Mus musculus mRNA for Ten-m4, comp... 51 1e-04
AE014298_1834(AE014298|pid:none) Drosophila melanogaster chromos... 51 1e-04
AM231718_1(AM231718|pid:none) Gallus gallus mRNA for tenascin-W ... 51 1e-04
(Q3UHK6) RecName: Full=Teneurin-4; Short=Ten-4; AltName... 51 1e-04
AK147329_1(AK147329|pid:none) Mus musculus cDNA, RIKEN full-leng... 51 1e-04
(Q6N022) RecName: Full=Teneurin-4; Short=Ten-4; AltName... 50 1e-04
AB210038_1(AB210038|pid:none) Homo sapiens mRNA for TNC variant ... 50 1e-04
BX510920_1(BX510920|pid:none) Zebrafish DNA sequence from clone ... 50 1e-04
(P24821) RecName: Full=Tenascin; Short=TN; AltName: Ful... 50 1e-04
(Q9WTS4) RecName: Full=Teneurin-1; Short=Ten-1; AltName... 50 1e-04
X56160_1(X56160|pid:none) Human mRNA for tenascin. 50 1e-04
AK304015_1(AK304015|pid:none) Homo sapiens cDNA FLJ60213 complet... 50 1e-04
AJ580920_1(AJ580920|pid:none) Mus musculus mRNA for tenascin-W p... 50 2e-04
M24630_1(M24630|pid:none) Human hexabrachion mRNA, partial cds. 50 2e-04
(Q80Z71) RecName: Full=Tenascin-N; Short=TN-N; Flags: P... 50 2e-04
U58738_2(U58738|pid:none) Caenorhabditis elegans cosmid F31A9, c... 50 2e-04
BC151843_1(BC151843|pid:none) Homo sapiens tenascin C, mRNA (cDN... 50 2e-04
BC138335_1(BC138335|pid:none) Mus musculus tenascin N, mRNA (cDN... 50 2e-04
AB052948_1(AB052948|pid:none) Homo sapiens mRNA for SREC-3, comp... 50 3e-04
AB052949_1(AB052949|pid:none) Homo sapiens mRNA for SREC-4, comp... 50 3e-04
AK291810_1(AK291810|pid:none) Homo sapiens cDNA FLJ78719 complet... 50 3e-04
(Q9W7R3) RecName: Full=Teneurin-4; Short=Ten-4; AltName... 50 3e-04
CR954216_234(CR954216|pid:none) Ostreococcus tauri strain OTTH05... 50 3e-04
BC169084_1(BC169084|pid:none) Rattus norvegicus delta-like 2 hom... 50 3e-04
AB052950_1(AB052950|pid:none) Homo sapiens mRNA for SREC-5, comp... 50 3e-04
AF056116_15(AF056116|pid:none) Fugu rubripes serine/threonine ki... 50 3e-04
AL807754_1(AL807754|pid:none) Zebrafish DNA sequence from clone ... 50 3e-04
BX004856_1(BX004856|pid:none) Zebrafish DNA sequence from clone ... 49 3e-04
DQ096731_1(DQ096731|pid:none) Danio rerio tenascin-C (TNC) mRNA,... 49 3e-04
AK121252_1(AK121252|pid:none) Oryza sativa Japonica Group cDNA c... 49 3e-04
AK098809_1(AK098809|pid:none) Homo sapiens cDNA FLJ25943 fis, cl... 49 4e-04
(Q9W6V6) RecName: Full=Teneurin-1; Short=Ten-1; AltName... 49 4e-04
AF195418_1(AF195418|pid:none) Mus musculus ODZ3 (Odz3) mRNA, par... 49 4e-04
(P41951) RecName: Full=Prion-like-(Q/N-rich) domain-bearing prot... 49 4e-04
BX537264_1(BX537264|pid:none) Zebrafish DNA sequence from clone ... 49 4e-04
JC5559(JC5559)lectin-B - Virginian pokeweed 49 4e-04
(Q9WTS6) RecName: Full=Teneurin-3; Short=Ten-3; AltName... 49 4e-04
AE014296_355(AE014296|pid:none) Drosophila melanogaster chromoso... 49 6e-04
AF145617_1(AF145617|pid:none) Drosophila melanogaster clone GH03... 49 6e-04
(Q9JLB4) RecName: Full=Cubilin; AltName: Full=Intrinsic factor-c... 48 7e-04
AB010266_2(AB010266|pid:none) Mus musculus Creb-rp, Tnx, Cyp21 g... 48 7e-04
AF463419_1(AF463419|pid:none) Naegleria gruberi basal body prote... 48 7e-04
AB173680_1(AB173680|pid:none) Macaca fascicularis brain cDNA clo... 48 7e-04
(Q9AVB0) RecName: Full=Lectin-B; AltName: Full=PL-B; Flags: Prec... 48 7e-04
FN357327_12(FN357327|pid:none) Schistosoma mansoni genome sequen... 48 7e-04
(Q9DER5) RecName: Full=Teneurin-2; Short=Ten-2; AltName... 48 0.001
(Q9Y5W5) RecName: Full=Wnt inhibitory factor 1; Short=W... 48 0.001
DQ917572_1(DQ917572|pid:none) Parhyale hawaiensis notch protein ... 48 0.001
A59180(A59180) Wnt inhibitory factor-1 - human &AF122922_1(AF12... 48 0.001
AK301818_1(AK301818|pid:none) Homo sapiens cDNA FLJ54458 complet... 48 0.001
BC018037_1(BC018037|pid:none) Homo sapiens WNT inhibitory factor... 48 0.001
BC118057_1(BC118057|pid:none) Mus musculus delta-like 2 homolog ... 47 0.001
AK074121_1(AK074121|pid:none) Homo sapiens mRNA for FLJ00193 pro... 47 0.001
AB001327_1(AB001327|pid:none) Halocynthia roretzi mRNA for HrNot... 47 0.001
(Q9P273) RecName: Full=Teneurin-3; Short=Ten-3; AltName... 47 0.001
S44208(S44208) extracellular matrix protein B - Dictyostelium mi... 47 0.001
AK176188_1(AK176188|pid:none) Arabidopsis thaliana mRNA for majo... 47 0.001
(Q9QYP0) RecName: Full=Multiple epidermal growth factor-like dom... 47 0.001
(Q6UY11) RecName: Full=Protein delta homolog 2; Short=D... 47 0.001
AL359813_9(AL359813|pid:none) Human DNA sequence from clone RP5-... 47 0.001
AF086610_1(AF086610|pid:none) Rattus norvegicus neurestin delta ... 47 0.001
X98852_1(X98852|pid:none) P.leniusculus mRNA for integrin beta s... 47 0.002
BC004048_1(BC004048|pid:none) Mus musculus Wnt inhibitory factor... 47 0.002
AC116984_28(AC116984|pid:none) Dictyostelium discoideum chromoso... 47 0.002
BC118139_1(BC118139|pid:none) Bos taurus WNT inhibitory factor 1... 47 0.002
Z81110_2(Z81110|pid:none) Caenorhabditis elegans Cosmid T01D3, c... 47 0.002
AY630342_1(AY630342|pid:none) Manduca sexta plasmatocyte-specifi... 47 0.002
AM431594_1(AM431594|pid:none) Vitis vinifera contig VV78X160416.... 47 0.002
(Q6IN38) RecName: Full=Wnt inhibitory factor 1; Short=W... 47 0.002
AC116984_103(AC116984|pid:none) Dictyostelium discoideum chromos... 47 0.002
AX133531_1(AX133531|pid:none) Sequence 1 from Patent WO0131011. 47 0.002
T22945(T22945;T24295)hypothetical protein T01D3.1 - Caenorhabdit... 47 0.002
AL645912_4(AL645912|pid:none) Mouse DNA sequence from clone RP23... 46 0.003
BC141361_1(BC141361|pid:none) Mus musculus odd Oz/ten-m homolog ... 46 0.003
EU589332_1(EU589332|pid:none) Sus scrofa delta-like 2 protein mR... 46 0.003
AY390351_1(AY390351|pid:none) Gallus gallus Schwann cell-specifi... 46 0.003
(O70244) RecName: Full=Cubilin; AltName: Full=Intrinsic factor-c... 46 0.003
AB257092_1(AB257092|pid:none) Halocynthia roretzi HrVLP-1 mRNA f... 46 0.003
EF087257_1(EF087257|pid:none) Picea sitchensis clone WS02736_H04... 46 0.003
AJ245710_1(AJ245710|pid:none) Mus musculus partial mRNA for tene... 46 0.003
AX250013_1(AX250013|pid:none) Sequence 12 from Patent WO0166747.... 46 0.004
AF007248_1(AF007248|pid:none) Mus musculus mutant fibrillin-1 (F... 46 0.004
BC172353_1(BC172353|pid:none) Synthetic construct Homo sapiens c... 46 0.004
(P98157) RecName: Full=Low-density lipoprotein receptor-related ... 46 0.004
(O57409) RecName: Full=Delta-like protein B; Short=Delt... 46 0.004
(Q9IAT6) RecName: Full=Delta-like protein C; Short=Delt... 46 0.004
AB032953_1(AB032953|pid:none) Homo sapiens mRNA for KIAA1127 pro... 46 0.004
BC162468_1(BC162468|pid:none) Danio rerio jagged 1a, mRNA (cDNA ... 45 0.005
BC129830_1(BC129830|pid:none) Homo sapiens tenascin R (restricti... 45 0.005
(Q9UMG7) RecName: Full=Tenascin-X; Short=TN-X; AltName:... 45 0.005
CU138540_8(CU138540|pid:none) Zebrafish DNA sequence from clone ... 45 0.005
X98085_1(X98085|pid:none) H.sapiens mRNA for tenascin-R. 45 0.005
CP000595_188(CP000595|pid:none) Ostreococcus lucimarinus CCE9901... 45 0.005
AL049547_2(AL049547|pid:none) Human DNA sequence from clone RP1-... 45 0.005
AL645922_24(AL645922|pid:none) Human DNA sequence from clone XXb... 45 0.005
AK295823_1(AK295823|pid:none) Homo sapiens cDNA FLJ60578 complet... 45 0.005
X71923_1(X71923|pid:none) H.sapiens XB gene for tenascin-X, exon... 45 0.005
Z94055_1(Z94055|pid:none) Human DNA sequence from clone RP1-24M1... 45 0.005
(P26012) RecName: Full=Integrin beta-8; Flags: Precursor; &A410... 45 0.006
AF005357_1(AF005357|pid:none) Ophlitaspongia tenuis integrin sub... 45 0.006
U50143_1(U50143|pid:none) Caenorhabditis elegans apx-1 related (... 45 0.006
(Q9WTS5) RecName: Full=Teneurin-2; Short=Ten-2; AltName... 45 0.006
FJ222590_1(FJ222590|pid:none) Periplaneta americana Delta protei... 45 0.006
AY282579_1(AY282579|pid:none) Solanum lycopersicoides disease re... 45 0.006
AB011541_1(AB011541|pid:none) Homo sapiens mRNA for MEGF8, parti... 45 0.006
AL773562_2(AL773562|pid:none) Pig DNA sequence from clone PigI-6... 45 0.006
AB470974_1(AB470974|pid:none) Ochromonas danica Ocm4 mRNA for tu... 45 0.006
AK295044_1(AK295044|pid:none) Homo sapiens cDNA FLJ60530 complet... 45 0.006
AJ566620_1(AJ566620|pid:none) Paramecium tetraurelia macronuclea... 45 0.006
AF086609_1(AF086609|pid:none) Rattus norvegicus neurestin gamma ... 45 0.006
AF491458_1(AF491458|pid:none) Caenorhabditis briggsae strain PB8... 45 0.008
AM463622_2(AM463622|pid:none) Vitis vinifera contig VV78X244153.... 45 0.008
BC168968_1(BC168968|pid:none) Rattus norvegicus N-acetylglucosam... 45 0.008
AF491459_1(AF491459|pid:none) Caenorhabditis briggsae strain HK1... 45 0.008
CP000113_4733(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 45 0.008
AF491460_1(AF491460|pid:none) Caenorhabditis briggsae strain AF1... 45 0.008
AF491463_1(AF491463|pid:none) Caenorhabditis briggsae strain VT8... 45 0.008
AY204471_3(AY204471|pid:none) Myxococcus xanthus C1260 adventuro... 45 0.008
(P11976) RecName: Full=Prestalk protein; AltName: Full=Extracell... 45 0.008
CP000113_6723(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 45 0.008
AF315555_1(AF315555|pid:none) Caenorhabditis briggsae notch-like... 45 0.008
BC142880_1(BC142880|pid:none) Danio rerio similar to alpha-2-mac... 45 0.008
BX883044_5(BX883044|pid:none) Rattus norvegicus chromosome 20, m... 44 0.011
AL773560_5(AL773560|pid:none) Pig DNA sequence from clone PigI-5... 44 0.011
S18188(S18188)notch protein homolog - rat 44 0.011
EF125736_1(EF125736|pid:none) Nyctotherus ovalis hypothetical pr... 44 0.011
EU293408_1(EU293408|pid:none) Capra hircus clone 5 Dlk1 transcri... 44 0.011
A35844(A35844)Xotch protein - African clawed frog 44 0.011
(P21783) RecName: Full=Neurogenic locus notch protein homolog; ... 44 0.011
AY751775_1(AY751775|pid:none) Xenopus laevis alpha2-macroglobuli... 44 0.011
AK302554_1(AK302554|pid:none) Homo sapiens cDNA FLJ51576 complet... 44 0.014
(O60494) RecName: Full=Cubilin; AltName: Full=Intrinsic factor-c... 44 0.014
(P78504) RecName: Full=Protein jagged-1; Short=Jagged1;... 44 0.014
AK290785_1(AK290785|pid:none) Homo sapiens cDNA FLJ77085 complet... 44 0.014
DQ657948_95(DQ657948|pid:none) Koi herpesvirus strain KHV-U, com... 44 0.014
AK312722_1(AK312722|pid:none) Homo sapiens cDNA, FLJ93126, highl... 44 0.014
CP001327_152(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 44 0.014
DQ462308_1(DQ462308|pid:none) Triticum aestivum clone UPW1 HFR-3... 44 0.014
DQ177346_95(DQ177346|pid:none) Koi herpesvirus strain KHV-I, com... 44 0.014
AY581198_1(AY581198|pid:none) Bos taurus integrin beta 5 (ITGB5)... 44 0.014
AP008984_109(AP008984|pid:none) Cyprinid herpesvirus 3 DNA, comp... 44 0.014
U61276_1(U61276|pid:none) Human transmembrane protein Jagged 1 (... 44 0.014
(Q54P69) RecName: Full=Protein psiM; Flags: Precursor; 44 0.014
AL365215_3(AL365215|pid:none) Human DNA sequence from clone RP11... 44 0.014
BC098393_1(BC098393|pid:none) Homo sapiens jagged 1 (Alagille sy... 44 0.014
AF034611_1(AF034611|pid:none) Homo sapiens intrinsic factor-B12 ... 44 0.014
AB210518_1(AB210518|pid:none) Ciona intestinalis mRNA for jagged... 44 0.018
AM746676_8749(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 44 0.018
EU441156_1(EU441156|pid:none) Patiria miniata delta protein mRNA... 44 0.018
AY845260_1(AY845260|pid:none) Mytilus edulis clone 2 foot protei... 44 0.018
(P35555) RecName: Full=Fibrillin-1; Flags: Precursor; &L13923_1... 44 0.018
X63556_1(X63556|pid:none) H.sapiens mRNA for fibrillin. 44 0.018
AX392975_1(AX392975|pid:none) Sequence 17 from Patent WO0214358.... 44 0.018
BC162451_1(BC162451|pid:none) Danio rerio crumbs homolog 2, mRNA... 44 0.018
AB210365_1(AB210365|pid:none) Ciona intestinalis mRNA for delta ... 44 0.018
BC067552_1(BC067552|pid:none) Danio rerio integrin, beta 1b.2, m... 44 0.018
AM910990_169(AM910990|pid:none) Plasmodium knowlesi strain H chr... 44 0.018
CR954207_381(CR954207|pid:none) Ostreococcus tauri strain OTTH05... 44 0.018
(P12606) RecName: Full=Integrin beta-1-A; Flags: Precursor; &A2... 43 0.024
A56136(A56136)jagged protein precursor - rat 43 0.024
AM746676_3301(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 43 0.024
Z66566_5(Z66566|pid:none) Caenorhabditis elegans Cosmid T25C12, ... 43 0.024
(Q6DI48) RecName: Full=Delta-like protein A; Short=Delt... 43 0.024
AF135059_1(AF135059|pid:none) Rattus norvegicus fibrillin-1 mRNA... 43 0.024
(Q61554) RecName: Full=Fibrillin-1; Flags: Precursor; &A55624(A... 43 0.024
CU458989_1(CU458989|pid:none) Danio rerio cDNA, clone cssl:d0399. 43 0.024
AC136974_11(AC136974|pid:none) Medicago truncatula clone mth2-22... 43 0.024
AL662830_12(AL662830|pid:none) Human DNA sequence from clone XXb... 43 0.024
AL844547_6(AL844547|pid:none) Mouse DNA sequence from clone RP23... 43 0.024
(Q9QXX0) RecName: Full=Protein jagged-1; Short=Jagged1;... 43 0.024
A38308(A38308;A35775;S12534;S11708) integrin beta-5 chain precur... 43 0.031
BC071284_1(BC071284|pid:none) Danio rerio tenascin W, mRNA (cDNA... 43 0.031
(P18084) RecName: Full=Integrin beta-5; Flags: Precursor; &BC00... 43 0.031
BT072644_1(BT072644|pid:none) Salmo salar clone ssal-rgf-534-220... 43 0.031
AP009049_1701(AP009049|pid:none) Clostridium kluyveri NBRC 12016... 43 0.031
AF074902_1(AF074902|pid:none) Caenorhabditis elegans laminin alp... 43 0.031
AF501275_1(AF501275|pid:none) Entamoeba histolytica clone C3 Gal... 43 0.031
AY892655_1(AY892655|pid:none) Synthetic construct Homo sapiens c... 43 0.031
AK315429_1(AK315429|pid:none) Homo sapiens cDNA, FLJ96485, highl... 43 0.031
BX927239_21(BX927239|pid:none) Human DNA sequence from clone DAM... 43 0.031
CU459119_1(CU459119|pid:none) Zebrafish DNA sequence from clone ... 43 0.031
AB011402_1(AB011402|pid:none) Hemicentrotus pulcherrimus mRNA fo... 43 0.031
AJ536342_1(AJ536342|pid:none) Glomeris marginata partial mRNA fo... 43 0.031
(Q5M9B3) RecName: Full=Integrin beta-like protein 1; Flags: Prec... 43 0.031
CR933878_21(CR933878|pid:none) Human DNA sequence from clone DAM... 43 0.031
D87558_1(D87558|pid:none) Gallus gallus mRNA for C-Serrate-2, pa... 43 0.031
AF085200_1(AF085200|pid:none) Hydra vulgaris receptor tyrosine k... 43 0.031
F87908(F87908;E87908) protein T22A3.8 [imported] - Caenorhabditi... 43 0.031
DQ020574_1(DQ020574|pid:none) Solanum torvum verticillium wilt d... 43 0.031
EU273942_1(EU273942|pid:none) Amphimedon queenslandica notch mRN... 43 0.031
BC046744_1(BC046744|pid:none) Xenopus laevis Integrin beta-like ... 43 0.031
FJ464558_1(FJ464558|pid:none) Solanum lycopersicum cultivar Crai... 42 0.040
Y12539_1(Y12539|pid:none) Branchiostoma floridae mRNA for putati... 42 0.040
T21773(T21773;T24297) hypothetical protein T01D3.6b - Caenorhabd... 42 0.040
(Q54C32) RecName: Full=Protein psiQ; Flags: Precursor; 42 0.040
(P49134) RecName: Full=Integrin beta-1; AltName: Full=Fibronecti... 42 0.040
AL591496_16(AL591496|pid:none) Mouse DNA sequence from clone RP2... 42 0.040
(P41990) RecName: Full=Anterior pharynx in excess protein 1; Fla... 42 0.040
(Q04721) RecName: Full=Neurogenic locus notch homolog protein 2;... 42 0.040
AF308601_1(AF308601|pid:none) Homo sapiens NOTCH 2 (N2) mRNA, co... 42 0.040
AB066348_1(AB066348|pid:none) Crassostrea gigas IBCGH mRNA for i... 42 0.040
AX357059_1(AX357059|pid:none) Sequence 21 from Patent EP1175909.... 42 0.040
D88991(D88991)protein apx-1 [imported] - Caenorhabditis elegans 42 0.040
FJ464560_1(FJ464560|pid:none) Solanum lycopersicum cultivar Mone... 42 0.040
AL591496_15(AL591496|pid:none) Mouse DNA sequence from clone RP2... 42 0.040
L42229_1(L42229|pid:none) Xenopus laevis X-Delta-1 gene, complet... 42 0.053
FN357369_73(FN357369|pid:none) Schistosoma mansoni genome sequen... 42 0.053
AM434731_1(AM434731|pid:none) Vitis vinifera contig VV78X204446.... 42 0.053
AB209873_1(AB209873|pid:none) Homo sapiens mRNA for notch1 prepr... 42 0.053
AF308602_1(AF308602|pid:none) Homo sapiens NOTCH 1 (N1) mRNA, co... 42 0.053
A48825(A48825)Notch homolog Motch protein - mouse (fragment) 42 0.053
BC084953_1(BC084953|pid:none) Xenopus laevis X-Serrate-1 protein... 42 0.053
AE014134_1453(AE014134|pid:none) Drosophila melanogaster chromos... 42 0.053
(P46531) RecName: Full=Neurogenic locus notch homolog protein 1;... 42 0.053
AB095016_1(AB095016|pid:none) Cynops pyrrhogaster Notch-1 mRNA f... 42 0.053
BC117810_1(BC117810|pid:none) Mus musculus RIKEN cDNA 6130401L20... 42 0.053
U89335_1(U89335|pid:none) Homo sapiens chromosome 6 notch4 (NOTC... 42 0.069
AF499438_1(AF499438|pid:none) Caenorhabditis briggsae notch-like... 42 0.069
(Q9TU53) RecName: Full=Cubilin; Flags: Precursor; &AF137068_1(A... 42 0.069
AF501273_1(AF501273|pid:none) Entamoeba histolytica clone C1 Gal... 42 0.069
AB470973_1(AB470973|pid:none) Ochromonas danica Ocm2 mRNA for tu... 42 0.069
AP008207_363(AP008207|pid:none) Oryza sativa (japonica cultivar-... 42 0.069
AB100603_1(AB100603|pid:none) Mus musculus Notch1 gene for trans... 42 0.069
S00670(S00670;A26637) neurogenic repetitive locus delta protein ... 42 0.069
AB023961_1(AB023961|pid:none) Homo sapiens NOTCH4 gene, exon 1 t... 42 0.069
BX004766_1(BX004766|pid:none) Zebrafish DNA sequence from clone ... 42 0.069
A31246(A31246)neurogenic protein Delta precursor - fruit fly (Dr... 42 0.069
BC163889_1(BC163889|pid:none) Danio rerio jagged 2, mRNA (cDNA c... 42 0.069
AB100603_2(AB100603|pid:none) Mus musculus Notch1 gene for trans... 42 0.069
AF229450_1(AF229450|pid:none) Danio rerio jagged2 (jag2) mRNA, c... 42 0.069
FJ039902_1(FJ039902|pid:none) Triticum aestivum DEP1 (DEP1) mRNA... 42 0.069
AF090432_1(AF090432|pid:none) Danio rerio serrateB mRNA, complet... 42 0.069
(P13508) RecName: Full=Protein glp-1; Flags: Precursor; &A32901... 42 0.069
AF508809_1(AF508809|pid:none) Mus musculus notch 1 protein mRNA,... 42 0.069
CP000587_387(CP000587|pid:none) Ostreococcus lucimarinus CCE9901... 42 0.069
(Q8CFM6) RecName: Full=Stabilin-2; AltName: Full=Fasciclin, EGF-... 42 0.069
AY437163_1(AY437163|pid:none) Drosophila melanogaster isolate so... 41 0.090
AF369477_1(AF369477|pid:none) Mus musculus strain 129P3/J lipopr... 41 0.090
AF003521_1(AF003521|pid:none) Homo sapiens Jagged 2 mRNA, comple... 41 0.090
AY437157_1(AY437157|pid:none) Drosophila melanogaster isolate so... 41 0.090
U13646_1(U13646|pid:none) Caenorhabditis elegans cosmid ZK783, c... 41 0.090
DQ227275_1(DQ227275|pid:none) Canis familiaris EMR1 mRNA, comple... 41 0.090
CR759822_3(CR759822|pid:none) Zebrafish DNA sequence from clone ... 41 0.090
AL929049_5(AL929049|pid:none) Zebrafish DNA sequence from clone ... 41 0.090
AY862413_1(AY862413|pid:none) Danio rerio laminin alpha 1 mRNA, ... 41 0.090
EU218035_1(EU218035|pid:none) Drosophila simulans strain MD99 my... 41 0.090
AY437145_1(AY437145|pid:none) Drosophila melanogaster isolate so... 41 0.090
X15202_1(X15202|pid:none) Mouse mRNA for fibronectin receptor be... 41 0.090
AL845481_1(AL845481|pid:none) Zebrafish DNA sequence from clone ... 41 0.090
AY437211_1(AY437211|pid:none) Drosophila melanogaster isolate so... 41 0.090
AK074051_1(AK074051|pid:none) Homo sapiens mRNA for FLJ00122 pro... 41 0.090
AM494965_257(AM494965|pid:none) Leishmania braziliensis chromoso... 41 0.090
AF029778_1(AF029778|pid:none) Homo sapiens Jagged2 (JAG2) mRNA, ... 41 0.090
AY128478_1(AY128478|pid:none) Drosophila melanogaster RE42104 fu... 41 0.090
(Q91ZX7) RecName: Full=Prolow-density lipoprotein receptor-relat... 41 0.090
AK298027_1(AK298027|pid:none) Homo sapiens cDNA FLJ51010 complet... 41 0.090
(Q8N2E2) RecName: Full=Von Willebrand factor D and EGF domain-co... 41 0.090
AY437205_1(AY437205|pid:none) Drosophila melanogaster isolate so... 41 0.090
S25111(S25111;S32554) alpha-2-macroglobulin receptor precursor -... 41 0.090
A27020(A27020)DIF-induced prestalk pDd63 protein precursor - sli... 41 0.090
BX897725_5(BX897725|pid:none) Zebrafish DNA sequence from clone ... 41 0.090
(P09055) RecName: Full=Integrin beta-1; AltName: Full=Fibronecti... 41 0.090
AK088729_1(AK088729|pid:none) Mus musculus 2 days neonate thymus... 41 0.090
(P26013) RecName: Full=Integrin beta-8; Flags: Precursor; &B410... 41 0.090
AK095637_1(AK095637|pid:none) Homo sapiens cDNA FLJ38318 fis, cl... 41 0.090
A30889(A30889) integrin beta chain precursor - fruit fly (Drosop... 41 0.090
AF029779_1(AF029779|pid:none) Homo sapiens hJAG2.del-E6 (JAG2) m... 41 0.090
AK159689_1(AK159689|pid:none) Mus musculus osteoclast-like cell ... 41 0.090
AF020201_1(AF020201|pid:none) Homo sapiens Jagged 2 mRNA, comple... 41 0.090
AB073427_1(AB073427|pid:none) Ciona savignyi mRNA for Delta, com... 41 0.090
EU706639_1(EU706639|pid:none) Drosophila melanogaster isolate Co... 41 0.090
EU685294_1(EU685294|pid:none) Branchiostoma lanceolatum notch re... 41 0.090
T34513(T34513)hypothetical protein ZK783.1 - Caenorhabditis eleg... 41 0.090
AX367152_1(AX367152|pid:none) Sequence 1 from Patent WO0204599. 41 0.090
Y14330_1(Y14330|pid:none) Homo sapiens partial mRNA for jagged2 ... 41 0.090
AY437193_1(AY437193|pid:none) Drosophila melanogaster isolate so... 41 0.090
BC117624_1(BC117624|pid:none) Danio rerio delta-like 4 (Drosophi... 41 0.090
AB009278_1(AB009278|pid:none) Bos taurus mRNA for preadipocyte f... 41 0.090
AB266841_1(AB266841|pid:none) Equus caballus itgb1 mRNA for beta... 41 0.12
(A6QR11) RecName: Full=Protein kinase C-binding protein NELL2; A... 41 0.12
AF091889_1(AF091889|pid:none) Homo sapiens Usher syndrome type I... 41 0.12
(Q14622) RecName: Full=Integrin beta-1; AltName: Full=Fibronecti... 41 0.12
AB001074_1(AB001074|pid:none) Caenorhabditis elegans mRNA for la... 41 0.12
CR954216_232(CR954216|pid:none) Ostreococcus tauri strain OTTH05... 41 0.12
M25063_1(M25063|pid:none) Drosophila mRNA for laminin B2 chain. ... 41 0.12
AY540953_1(AY540953|pid:none) Strongylocentrotus purpuratus prot... 41 0.12
AP007224_10(AP007224|pid:none) Oryza sativa Japonica Group genom... 41 0.12
Z70286_4(Z70286|pid:none) Caenorhabditis elegans Cosmid K08C7, c... 41 0.12
AY756174_5(AY756174|pid:none) Oryza rufipogon putative leucine-r... 41 0.12
AF468059_1(AF468059|pid:none) Bos taurus integrin beta 5 subunit... 41 0.12
DQ871216_1(DQ871216|pid:none) Bos taurus integrin beta 5 mRNA, c... 41 0.12
AM920429_155(AM920429|pid:none) Penicillium chrysogenum Wisconsi... 41 0.12
(Q8C088) RecName: Full=EGF-like domain-containing protein C3orf5... 41 0.12
I50719(I50719) C-Delta-1 - chicken &U26590_1(U26590|pid:none) 41 0.12
BX276181_1(BX276181|pid:none) Zebrafish DNA sequence from clone ... 41 0.12
AE014185_240(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 41 0.12
AM920433_573(AM920433|pid:none) Penicillium chrysogenum Wisconsi... 41 0.12
AL691427_2(AL691427|pid:none) Mouse DNA sequence from clone RP23... 41 0.12
B27079(B27079) fibronectin receptor beta chain precursor - human... 41 0.12
DQ167755_1(DQ167755|pid:none) Drosophila orena putative Laminin ... 41 0.12
(P15215) RecName: Full=Laminin subunit gamma-1; AltName: Full=La... 41 0.12
A26838(A26838)prestalk protein precursor - slime mold (Dictyoste... 41 0.12
BC136179_1(BC136179|pid:none) Xenopus tropicalis hypothetical pr... 41 0.12
AJ507290_1(AJ507290|pid:none) Cupiennius salei mRNA for Delta2 p... 41 0.12
(Q21313) RecName: Full=Laminin-like protein epi-1; Flags: Precur... 41 0.12
BX537407_1(BX537407|pid:none) Homo sapiens mRNA; cDNA DKFZp686D0... 41 0.12
AE014296_1167(AE014296|pid:none) Drosophila melanogaster chromos... 40 0.15
L07288_1(L07288|pid:none) Drosophila melanogaster laminin A (Lam... 40 0.15
X56811_1(X56811|pid:none) D.melanogaster Serrate mRNA for EGF-li... 40 0.15
M96388_1(M96388|pid:none) Drosophila melanogaster laminin A chai... 40 0.15
(P18168) RecName: Full=Serrate protein; AltName: Full=Protein be... 40 0.15
AB043893_1(AB043893|pid:none) Mus musculus dll-4 mRNA for Delta-... 40 0.15
FN357711_14(FN357711|pid:none) Schistosoma mansoni genome sequen... 40 0.15
AL110485_32(AL110485|pid:none) Caenorhabditis elegans YAC Y46G5A... 40 0.15
AY805407_1(AY805407|pid:none) Danio rerio notch1b mRNA, complete... 40 0.15
AB210366_1(AB210366|pid:none) Ciona intestinalis mRNA for delta-... 40 0.15
AJ295695_1(AJ295695|pid:none) Homo sapiens mRNA for stabilin-2 (... 40 0.15
BT032866_1(BT032866|pid:none) Drosophila melanogaster SD07123 fu... 40 0.15
(Q9JI71) RecName: Full=Delta-like protein 4; AltName: Full=Droso... 40 0.15
AM746676_2210(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 40 0.15
(Q00174) RecName: Full=Laminin subunit alpha; Short=Lam... 40 0.15
S16148(S16148;S16878;A36666)gene serrate protein precursor - fru... 40 0.15
CR383662_1(CR383662|pid:none) Zebrafish DNA sequence from clone ... 40 0.15
(P97607) RecName: Full=Protein jagged-2; Short=Jagged2;... 40 0.15
AM746676_988(AM746676|pid:none) Sorangium cellulosum 'So ce 56' ... 40 0.15
(P82771) RecName: Full=Putative low-molecular-weight cysteine-ri... 40 0.15
(Q01705) RecName: Full=Neurogenic locus notch homolog protein 1;... 40 0.15
AJ437480_3(AJ437480|pid:none) Paramecium tetraurelia partial npe... 40 0.15
AL133021_1(AL133021|pid:none) Homo sapiens mRNA; cDNA DKFZp434E0... 40 0.15
AE014297_4255(AE014297|pid:none) Drosophila melanogaster chromos... 40 0.15
AB052958_1(AB052958|pid:none) Homo sapiens mRNA for FELE-2, comp... 40 0.15
DQ917570_1(DQ917570|pid:none) Parhyale hawaiensis delta protein ... 40 0.15
(Q8WWQ8) RecName: Full=Stabilin-2; AltName: Full=Fasciclin, EGF-... 40 0.15
AC115599_1(AC115599|pid:none) Dictyostelium discoideum chromosom... 40 0.15
AP003948_11(AP003948|pid:none) Oryza sativa Japonica Group genom... 40 0.20
(Q5R3Z7) RecName: Full=Protein kinase C-binding protein NELL2; A... 40 0.20
AF489528_1(AF489528|pid:none) Homo sapiens transforming growth f... 40 0.20
EU760971_1(EU760971|pid:none) Meleagris gallopavo delta-like pro... 40 0.20
EU854565_1(EU854565|pid:none) Danio rerio fibrillin 4 (fbn4) mRN... 40 0.20
A49175(A49175;PH1570;S32113) Motch B protein - mouse (fragment) ... 40 0.20
FN357841_1(FN357841|pid:none) Schistosoma mansoni genome sequenc... 40 0.20
A35626(A35626) transforming growth factor beta-1-binding protein... 40 0.20
AE014297_4237(AE014297|pid:none) Drosophila melanogaster chromos... 40 0.20
AB095017_1(AB095017|pid:none) Cynops pyrrhogaster Delta-1 mRNA f... 40 0.20
BC172642_1(BC172642|pid:none) Synthetic construct Mus musculus c... 40 0.20
CP000589_312(CP000589|pid:none) Ostreococcus lucimarinus CCE9901... 40 0.20
EU564006_1(EU564006|pid:none) Sus scrofa delta-like 1 isoform C ... 40 0.20
BC017134_1(BC017134|pid:none) Mus musculus EGF, latrophilin seve... 40 0.20
CP001323_444(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 40 0.20
AJ507288_1(AJ507288|pid:none) Cupiennius salei partial mRNA for ... 40 0.20
AK295125_1(AK295125|pid:none) Homo sapiens cDNA FLJ56077 complet... 40 0.20
AF179412_1(AF179412|pid:none) Dendroides canadensis antifreeze p... 40 0.20
AF385682_1(AF385682|pid:none) Mus musculus ETL1 mRNA, complete c... 40 0.20
(P07228) RecName: Full=Integrin beta-1; AltName: Full=CSAT antig... 40 0.20
AK316058_1(AK316058|pid:none) Homo sapiens cDNA, FLJ78957 comple... 40 0.20
BC155681_1(BC155681|pid:none) Xenopus tropicalis hypothetical pr... 40 0.20
BT011327_1(BT011327|pid:none) Drosophila melanogaster SD22390 fu... 40 0.20
AK299277_1(AK299277|pid:none) Homo sapiens cDNA FLJ53170 complet... 40 0.20
AB208801_1(AB208801|pid:none) Homo sapiens mRNA for latent trans... 40 0.20
BC135592_1(BC135592|pid:none) Xenopus tropicalis delta-like 1, m... 40 0.20
DQ440589_1(DQ440589|pid:none) Danio rerio truncated integrin bet... 40 0.20
AF272367_1(AF272367|pid:none) Lycopersicon esculentum verticilli... 40 0.26
(Q07954) RecName: Full=Prolow-density lipoprotein receptor-relat... 40 0.26
AF315556_1(AF315556|pid:none) Caenorhabditis remanei notch-like ... 40 0.26
CT025750_1(CT025750|pid:none) Zebrafish DNA sequence from clone ... 40 0.26
AF032672_1(AF032672|pid:none) Lucilia cuprina Notch homolog (Scl... 40 0.26
AC006300_12(AC006300|pid:none) Arabidopsis thaliana chromosome 2... 40 0.26
AE014185_364(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 40 0.26
AE014134_2523(AE014134|pid:none) Drosophila melanogaster chromos... 40 0.26
Y10354_1(Y10354|pid:none) D.rerio notch6 mRNA. 40 0.26
AY283519_1(AY283519|pid:none) Brassica napus CLV1-like receptor ... 40 0.26
JC2005(JC2005)integrin beta-5 chain - baboon 40 0.26
AY279557_1(AY279557|pid:none) Babesia bovis putative variant ery... 40 0.26
AB046104_1(AB046104|pid:none) Macaca fascicularis brain cDNA, cl... 40 0.26
CP000592_153(CP000592|pid:none) Ostreococcus lucimarinus CCE9901... 40 0.26
(Q9GLP0) RecName: Full=Integrin beta-1; AltName: Full=Fibronecti... 40 0.26
FJ464553_1(FJ464553|pid:none) Solanum lycopersicum cultivar Crai... 40 0.26
BT011693_1(BT011693|pid:none) Arabidopsis thaliana At3g57630 gen... 40 0.26
AB261163_1(AB261163|pid:none) Oryza sativa Japonica Group gene f... 40 0.26
DQ311330_1(DQ311330|pid:none) Bombyx mori Wnt inhibitory factor ... 40 0.26
L14815_1(L14815|pid:none) Entamoeba histolytica HM-1:IMSS galact... 40 0.26
CT033758_4(CT033758|pid:none) Mouse DNA sequence from clone RP23... 39 0.34
AF370126_1(AF370126|pid:none) Mus musculus brain EGF repeat-cont... 39 0.34
BC088400_1(BC088400|pid:none) Rattus norvegicus laminin, beta 2,... 39 0.34
(Q8JZM4) RecName: Full=Delta and Notch-like epidermal growth fac... 39 0.34
(O00548) RecName: Full=Delta-like protein 1; AltName: Full=Droso... 39 0.34
EU360938_1(EU360938|pid:none) Metaphire posthuma metallothionein... 39 0.34
AK297918_1(AK297918|pid:none) Homo sapiens cDNA FLJ57405 complet... 39 0.34
BC013197_1(BC013197|pid:none) Homo sapiens delta-like 1 homolog ... 39 0.34
CP001326_294(CP001326|pid:none) Micromonas sp. RCC299 chromosome... 39 0.34
CP000102_568(CP000102|pid:none) Methanosphaera stadtmanae DSM 30... 39 0.34
CP000769_3723(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 39 0.34
AK140251_1(AK140251|pid:none) Mus musculus adult male corpora qu... 39 0.34
BC124250_1(BC124250|pid:none) Danio rerio zgc:153112, mRNA (cDNA... 39 0.34
AF196571_1(AF196571|pid:none) Homo sapiens Delta-like-1 protein ... 39 0.34
CP000769_2725(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 39 0.34
AK300399_1(AK300399|pid:none) Homo sapiens cDNA FLJ53921 complet... 39 0.34
(P80370) RecName: Full=Protein delta homolog 1; Short=D... 39 0.34
AF003522_1(AF003522|pid:none) Homo sapiens Delta mRNA, complete ... 39 0.34
CS237425_1(CS237425|pid:none) Sequence 140 from Patent WO2005113... 39 0.34
BC094612_1(BC094612|pid:none) Mus musculus latent transforming g... 39 0.34
(Q8CIR0) RecName: Full=Latent-transforming growth factor beta-bi... 39 0.34
DQ167758_1(DQ167758|pid:none) Drosophila yakuba putative Laminin... 39 0.34
AK074062_1(AK074062|pid:none) Homo sapiens mRNA for FLJ00133 pro... 39 0.34
(P15800) RecName: Full=Laminin subunit beta-2; AltName: Full=S-l... 39 0.34
EF677650_1(EF677650|pid:none) Picea sitchensis clone WS02772_G01... 39 0.34
BC007741_1(BC007741|pid:none) Homo sapiens delta-like 1 homolog ... 39 0.34
(P35590) RecName: Full=Tyrosine-protein kinase receptor Tie-1; ... 39 0.34
Z12172_1(Z12172|pid:none) H.sapiens dlk mRNA for putative homeot... 39 0.34
AL035436_2(AL035436|pid:none) Drosophila melanogaster cosmid clo... 39 0.34
AB098194_1(AB098194|pid:none) Codonosiga gracilis CgPTK-f mRNA f... 39 0.34
AK152755_1(AK152755|pid:none) Mus musculus bone marrow macrophag... 39 0.34
AK289384_1(AK289384|pid:none) Homo sapiens cDNA FLJ78166 complet... 39 0.34
AC124958_12(AC124958|pid:none) Medicago truncatula clone mth2-18... 39 0.34
BC022636_1(BC022636|pid:none) Mus musculus delta/notch-like EGF-... 39 0.34

>AC116967_7(AC116967|pid:none) Dictyostelium discoideum chromosome 2
map 5481549-5500786 strain AX4, complete sequence.
Length = 1152

Score = 176 bits (447), Expect = 1e-42
Identities = 121/433 (27%), Positives = 200/433 (46%), Gaps = 33/433 (7%)
Frame = +2

Query: 158 KLYGLIPQSYCNVITDFSDNTLTGEIPNCFTCYFNDT---------DSLVKNKFANNKFT 310
K G I +S+C S LTG +P+CF CYFN T + ++FA+NKF+
Sbjct: 368 KFTGTIDKSWCTTEIAVSLGNLTGLVPSCFACYFNVTTVNSYSKLTQKSMFSRFASNKFS 427

Query: 311 NYATQGPCTTMKPNL-LVNA---TTLILYGESLGFNGRLIKTNATGS---TTFTMIQPSS 469
N+ T PCTT +P + L+N +++ G +GF+ L K N T S TT+ + Q
Sbjct: 428 NFNTNTPCTTFRPKVELINDGIFNKVMVTGNDIGFDVTLWKINLTISLDPTTYVINQNGK 487

Query: 470 YFTLNLRTTNIFAKGARSLILTWTVGSEIRKFTLPIVKQAPVPANITYSGIASNQVEING 649
+T + N K + +T + + +T P P N+++++G
Sbjct: 488 NYTATMVGANNNLKNVEYFPVLFTTPNNVT-YTFPTNYNIPPIIKSVLIKSTGNEIQVSG 546

Query: 650 EFFT----YNITDVSVLVSGNDCLVTYTTFNQIKCTLTKGLNESI---VLPVDFIFVDII 808
F+ + V + GN +T + F +CT+ G I +P+ I ++
Sbjct: 547 THFSSYLGFTNQQVQIQNVGNCSTITSSDFFGAQCTMESGKQLPISNSTIPLQIISIE-- 604

Query: 809 VGGNKTSVYVRLQETSYINNKKCNPELCTS---NTYCNLNDGIC-----YPHLDCIS-DC 961
Y+++ E+++ NN+ C + TS N+ C+L+ G C + DC+ +C
Sbjct: 605 KDSFNVKAYIKI-ESNFDNNQVCPNDCSTSVGVNSICDLSSGTCKCLPGFIGSDCLGIEC 663

Query: 962 TINNAVCNHVSGLCDCRNNCSNAGLCNGVDGTCSCNSGRLFNDCSGIQCTGTPI-CSNHG 1138
++ + CS G CN G C C+S +DCS + P+ C+++G
Sbjct: 664 SVPD---------------CSGNGYCNTTIGECICDSSHRGSDCSILFIECDPLDCNSNG 708

Query: 1139 TCDTSNGKCKCESIIWVGNACQDTQHYVNAITPSNENGGKVLLFGWFGSTHSNASVIIGS 1318
CDT+ G+C C+ W G C HY+ + PS NGG G+FG TH+N S+ IG+
Sbjct: 709 VCDTTKGECNCKENSWSGPTCLIPYHYITSTIPSTTNGGVASFIGFFGDTHNNLSITIGN 768

Query: 1319 QECNITSINQTVI 1357
C + + TV+
Sbjct: 769 LPCPLLYNSTTVL 781

Score = 45.4 bits (106), Expect = 0.005
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +2

Query: 1007 CRNNCSNAGLCNGVDGTCSCNSGRLFNDCSGIQCTGTPICSNHGTCDTSNG 1159
C N CSN G CN ++G C CN+G DCSGI G +N G+ S+G
Sbjct: 818 CPNKCSNQGTCNTLNGQCKCNNGFNGADCSGIINPGGG--NNGGSNSDSDG 866

Score = 38.9 bits (89), Expect = 0.44
Identities = 48/234 (20%), Positives = 84/234 (35%)
Frame = +2

Query: 653 FFTYNITDVSVLVSGNDCLVTYTTFNQIKCTLTKGLNESIVLPVDFIFVDIIVGGNKTSV 832
FF ++S+ + C + Y + + CT G +V ++ N T
Sbjct: 754 FFGDTHNNLSITIGNLPCPLLYNSTTVLNCTAPPGFGVKLV---------VVTQNNITYS 804

Query: 833 YVRLQETSYINNKKCNPELCTSNTYCNLNDGICYPHLDCISDCTINNAVCNHVSGLCDCR 1012
Y + Q + INN+ C P C+ N CN ++G C C
Sbjct: 805 YDKYQYLN-INNQTC-PNKCS------------------------NQGTCNTLNGQCKC- 837

Query: 1013 NNCSNAGLCNGVDGTCSCNSGRLFNDCSGIQCTGTPICSNHGTCDTSNGKCKCESIIWVG 1192
NN N C+G+ N+G +D G N+G T G +
Sbjct: 838 NNGFNGADCSGIINPGGGNNGGSNSDSDG---------GNNGNPPTDTGVDPGTGNTTIS 888

Query: 1193 NACQDTQHYVNAITPSNENGGKVLLFGWFGSTHSNASVIIGSQECNITSINQTV 1354
N Q + ++ + NG V + + +N++ S+ I +++QT+
Sbjct: 889 NQEVQFQIFFKSLYEIDFNGNIVATYSLRNNWTTNST---NSKNEIIYTLSQTI 939

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,102,271,912
Number of extensions: 45648883
Number of successful extensions: 136752
Number of sequences better than 10.0: 983
Number of HSP's gapped: 133744
Number of HSP's successfully gapped: 2025
Length of query: 460
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 328
Effective length of database: 623,955,076
Effective search space: 204657264928
Effective search space used: 204657264928
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.69 gvh: 0.38 alm: 0.29 top: 0.67 tms: 0.07 mit: 0.20 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.33 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.02 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 1.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

48.0 %: nuclear
28.0 %: cytoplasmic
12.0 %: mitochondrial
8.0 %: Golgi
4.0 %: vesicles of secretory system

>> prediction for Contig-U13304-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 2
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 1
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0