>Contig-U02147-1 (Contig-U02147-1Q) /CSM_Contig/Contig-U02147-1Q.Seq.d
AANGTTAAAANGAAAAAAAAAAGTNGGAAAAAANCCTTTAAAAAAAAAAN
AANNCCCCCNAAAANGGNGGNTTCNAAAAANGNGGNTTCNAAAAAGGNGG
NTTCNAAAAANGGGGNTTCNAAAAAGGNGGNTATTTTTAAAAAGTTTAAA
AGGNANTAATTTATTTTTTNAAAAAAAACNNAAAAAAAACNNAAAAAAAA
AAAACTNAAAATATCATAAAAAAAAAAAATAATAAAAAAAAAACTATTTT
AAA

est1=VFF286Z,1,254

XLKXKKKVGKXPLKKKXXPXKXXXXKXXXXKRXXXKXGXXKRXXFLKSLKGXNLFFXKKX
KKNXKKKNXKYHKKKK**kknyfk

Frame A:
xvkxkkksxkkxfkkkxxppkxxxskxxxskkxxskxgxskkxxifkkfkrx*fifxkkt
xkkxkkkklkis*kkkiikkklf*


Frame B:
XLKXKKKVGKXPLKKKXXPXKXXXXKXXXXKRXXXKXGXXKRXXFLKSLKGXNLFFXKKX
KKNXKKKNXKYHKKKK**kknyfk


Frame C:
x*xekkkxekxl*kkxxxpxxggfxkxgfxkggfxkxgfxkggyf*kv*kxxiyfxkknx
kktxkkktxniikkknnkkktil

Query= Contig-U02147-1 (Contig-U02147-1Q)
/CSM_Contig/Contig-U02147-1Q.Seq.d
         (253 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


 ***** No hits found ******

  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 0
Number of Sequences: 6905
Number of extensions: 0
Number of successful extensions: 0
Number of sequences better than 10.0: 0
length of query: 253
length of database: 5,674,871
effective HSP length: 15
effective length of query: 238
effective length of database: 5,571,296
effective search space: 1325968448
effective search space used: 1325968448
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)

Query= Contig-U02147-1 (Contig-U02147-1Q) /CSM_Contig/Contig-U02147-1Q.Seq.d
         (253 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

 ***** No hits found ******

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 0
Number of sequences better than 10.0: 0
Length of query: 253
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 230
Effective length of database: 99,442,330,388
Effective search space: 22871735989240
Effective search space used: 22871735989240
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)

Query= Contig-U02147-1 (Contig-U02147-1Q) /CSM_Contig/Contig-U02147-1Q.Seq.d
         (253 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P98092) RecName: Full=Hemocytin; AltName: Full=Humoral lectin; ...    36   0.49
S52093(S52093;S70920)hemocytin - silkworm                              36   0.49
CP000943_5744(CP000943|pid:none) Methylobacterium sp. 4-46, comp...    35   0.83

>(P98092) RecName: Full=Hemocytin; AltName: Full=Humoral lectin;
            Flags: Precursor;  &D29738_1(D29738|pid:none)
          Length = 3133

 Score = 35.8 bits (81), Expect = 0.49
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = +3

Query: 69   GFXKXGFXKGGFXKXGFXKGGY 134
            G+ K G+ KGGF K GF KGGY
Sbjct: 1509 GYAKTGYSKGGFSKGGFSKGGY 1530

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 85,269,439
Number of extensions: 2125924
Number of successful extensions: 1817
Number of sequences better than 10.0: 3
Number of HSP's gapped: 1704
Number of HSP's successfully gapped: 4
Length of query: 84
Length of database: 1,051,180,864
Length adjustment: 54
Effective length of query: 30
Effective length of database: 876,406,678
Effective search space: 26292200340
Effective search space used: 26292200340
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 27 (15.0 bits)

 psg: 0.51  gvh: 0.33  alm: 0.63  top: 0.53  tms: 0.00  mit: 0.40  mip: 0.00
 nuc: 0.43  erl: 0.00  erm: 0.60  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 64.0 %: nuclear
	 24.0 %: cytoplasmic
	 12.0 %: mitochondrial

>> prediction for Contig-U02147-1 is nuc