Contig-U13205-1
Contig ID Contig-U13205-1
Contig update 2002.12.18
Contig sequence
>Contig-U13205-1 (Contig-U13205-1Q) /CSM_Contig/Contig-U13205-1Q.Seq.d
TGTATAACAACCGATTTTTGTGATCCACAAATTTGTTNAGGTGACCCATT
AAATCTTAGCTGTATTAAAAATATGTCAATGTGTGATGATGGAAATTATT
GCACAACGGATATATGTTCTGGTAATGGAGTTTGCTCTCACTCATCACCC
GATCCTTTATGTAGATCATGTAAATCAACAAACTGTACAACAACTGATTT
ATGTCAACTTCAAATATGTAGTGCGGATGGTAGTGGTTGTGAAACTGATC
AAAAGGGTCTTTGTGATGATAAAGATCCATGTACAACCGATCTTTGTGAT
AAAGGAGTTTGTACTCACCCAAAAATTACTGATTGTATGGCATGTAATGA
AACATTTGCTTGTATTACAACAGTATTTTGTGAATATCAGATATGTAGTA
GTGATAAAACCCATTGTATTCAAACAGAAAGAAATTGTGATGATCAAAAT
GAATGCAGTACTGATTTTTGTCAAAACGATCAATGTTCTCATTATTTTCC
TAAAGATTGTTTCTTGTGTGGAAATCAAACCTGCCATGATTATGACATAT
GCTACCCAGCCTATTGTGATATCAGCACTTCCACTTGTGCCAACACTACT
TTGACTTGTGACGATAAGGACCCATGTACAAAAGATATTTGTTTTTCAGG
AACGGGTTGTGGATTTGTAACTATAGATAGGTGTACAAAATGTAATGAAA
CTGTAGCATGCATTGAAAAGGATTTATGTAAATCATTGCAATGTCCTGCC
GATGGGTCTGATGAATGTATTTCCTCTGATAAGAATTGTGATGATGGTAA
TCCATGTACATATTCAGAGTGTGATCCTGAAACTGGTTCATGTATAGATT
CATTCATTGAAGGTTGTTCACTTTGTTCAAAGCCAGGTGTATA

Gap no gap
Contig length 893
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 671849
End point 672742
Strand (PLUS/MINUS) PLUS
Number of clones 2
Number of EST 2
Link to clone list U13205
List of clone(s)

est1=SFL474F,1,507
est2=SLC611F,252,894
Translated Amino Acid sequence
CITTDFCDPQICXGDPLNLSCIKNMSMCDDGNYCTTDICSGNGVCSHSSPDPLCRSCKST
NCTTTDLCQLQICSADGSGCETDQKGLCDDKDPCTTDLCDKGVCTHPKITDCMACNETFA
CITTVFCEYQICSSDKTHCIQTERNCDDQNECSTDFCQNDQCSHYFPKDCFLCGNQTCHD
YDICYPAYCDISTSTCANTTLTCDDKDPCTKDICFSGTGCGFVTIDRCTKCNETVACIEK
DLCKSLQCPADGSDECISSDKNCDDGNPCTYSECDPETGSCIDSFIEGCSLCSKPGV


Translated Amino Acid sequence (All Frames)
Frame A:
CITTDFCDPQICXGDPLNLSCIKNMSMCDDGNYCTTDICSGNGVCSHSSPDPLCRSCKST
NCTTTDLCQLQICSADGSGCETDQKGLCDDKDPCTTDLCDKGVCTHPKITDCMACNETFA
CITTVFCEYQICSSDKTHCIQTERNCDDQNECSTDFCQNDQCSHYFPKDCFLCGNQTCHD
YDICYPAYCDISTSTCANTTLTCDDKDPCTKDICFSGTGCGFVTIDRCTKCNETVACIEK
DLCKSLQCPADGSDECISSDKNCDDGNPCTYSECDPETGSCIDSFIEGCSLCSKPGV


Frame B:
v*qpifvihkfvxvth*ilavlkicqcvmmeiiaqriyvlvmefalthhpilyvdhvnqq
tvqqliyvnfkyvvrmvvvvklikrvfvmikihvqpifvikefvltqkllivwhvmkhll
vlqqyfvniryvvvikpivfkqkeivmikmnavlifvktinvliiflkivscveikpami
mtyatqpivisalplvptll*lvtirthvqkifvfqervvdl*l*igvqnvmkl*halkr
iyvnhcnvlpmglmnvfplirivmmvihvhiqsvilklvhv*ihslkvvhfvqsqvy


Frame C:
ynnrfl*stnlxr*piks*ly*kyvnv**wkllhngymfw*wsllslitrsfm*im*ink
lynn*fmstsnm*cgw*wl*n*skgsl***rsmynrsl**rslyspkny*lygm**nicl
yynsil*isdm****nplysnrkkl**sk*mqy*flskrsmfslfs*rlflvwksnlp*l
*hmlpsll*yqhfhlcqhyfdl*r*gpmykrylffrnglwicnyr*vykm**ncsmh*kg
fm*iiamscrwv**myfl**el**w*smyifrv*s*nwfmyrfih*rlftlfkarci


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U13205-1 (Contig-U13205-1Q)
/CSM_Contig/Contig-U13205-1Q.Seq.d
(893 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U13205-1 (Contig-U13205-1Q) /CSM_Contig/Conti... 1764 0.0
Contig-U13087-1 (Contig-U13087-1Q) /CSM_Contig/Conti... 50 4e-06
Contig-U12833-1 (Contig-U12833-1Q) /CSM_Contig/Conti... 50 4e-06
Contig-U14682-1 (Contig-U14682-1Q) /CSM_Contig/Conti... 44 3e-04
Contig-U12894-1 (Contig-U12894-1Q) /CSM_Contig/Conti... 40 0.004
Contig-U11926-1 (Contig-U11926-1Q) /CSM_Contig/Conti... 40 0.004
Contig-U03117-1 (Contig-U03117-1Q) /CSM_Contig/Conti... 40 0.004
Contig-U12151-1 (Contig-U12151-1Q) /CSM_Contig/Conti... 38 0.016
Contig-U11419-1 (Contig-U11419-1Q) /CSM_Contig/Conti... 38 0.016
Contig-U10800-1 (Contig-U10800-1Q) /CSM_Contig/Conti... 36 0.063

>Contig-U13205-1 (Contig-U13205-1Q) /CSM_Contig/Contig-U13205-1Q.Seq.d
Length = 893

Score = 1764 bits (890), Expect = 0.0
Identities = 893/893 (100%)
Strand = Plus / Plus


Query: 1 tgtataacaaccgatttttgtgatccacaaatttgttnaggtgacccattaaatcttagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtataacaaccgatttttgtgatccacaaatttgttnaggtgacccattaaatcttagc 60


Query: 61 tgtattaaaaatatgtcaatgtgtgatgatggaaattattgcacaacggatatatgttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtattaaaaatatgtcaatgtgtgatgatggaaattattgcacaacggatatatgttct 120


Query: 121 ggtaatggagtttgctctcactcatcacccgatcctttatgtagatcatgtaaatcaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggtaatggagtttgctctcactcatcacccgatcctttatgtagatcatgtaaatcaaca 180


Query: 181 aactgtacaacaactgatttatgtcaacttcaaatatgtagtgcggatggtagtggttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aactgtacaacaactgatttatgtcaacttcaaatatgtagtgcggatggtagtggttgt 240


Query: 241 gaaactgatcaaaagggtctttgtgatgataaagatccatgtacaaccgatctttgtgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaaactgatcaaaagggtctttgtgatgataaagatccatgtacaaccgatctttgtgat 300


Query: 301 aaaggagtttgtactcacccaaaaattactgattgtatggcatgtaatgaaacatttgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaaggagtttgtactcacccaaaaattactgattgtatggcatgtaatgaaacatttgct 360


Query: 361 tgtattacaacagtattttgtgaatatcagatatgtagtagtgataaaacccattgtatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtattacaacagtattttgtgaatatcagatatgtagtagtgataaaacccattgtatt 420


Query: 421 caaacagaaagaaattgtgatgatcaaaatgaatgcagtactgatttttgtcaaaacgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caaacagaaagaaattgtgatgatcaaaatgaatgcagtactgatttttgtcaaaacgat 480


Query: 481 caatgttctcattattttcctaaagattgtttcttgtgtggaaatcaaacctgccatgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caatgttctcattattttcctaaagattgtttcttgtgtggaaatcaaacctgccatgat 540


Query: 541 tatgacatatgctacccagcctattgtgatatcagcacttccacttgtgccaacactact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tatgacatatgctacccagcctattgtgatatcagcacttccacttgtgccaacactact 600


Query: 601 ttgacttgtgacgataaggacccatgtacaaaagatatttgtttttcaggaacgggttgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgacttgtgacgataaggacccatgtacaaaagatatttgtttttcaggaacgggttgt 660


Query: 661 ggatttgtaactatagataggtgtacaaaatgtaatgaaactgtagcatgcattgaaaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ggatttgtaactatagataggtgtacaaaatgtaatgaaactgtagcatgcattgaaaag 720


Query: 721 gatttatgtaaatcattgcaatgtcctgccgatgggtctgatgaatgtatttcctctgat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gatttatgtaaatcattgcaatgtcctgccgatgggtctgatgaatgtatttcctctgat 780


Query: 781 aagaattgtgatgatggtaatccatgtacatattcagagtgtgatcctgaaactggttca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aagaattgtgatgatggtaatccatgtacatattcagagtgtgatcctgaaactggttca 840


Query: 841 tgtatagattcattcattgaaggttgttcactttgttcaaagccaggtgtata 893
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tgtatagattcattcattgaaggttgttcactttgttcaaagccaggtgtata 893


>Contig-U13087-1 (Contig-U13087-1Q) /CSM_Contig/Contig-U13087-1Q.Seq.d
Length = 547

Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus


Query: 785 attgtgatgatggtaatccatgtac 809
|||||||||||||||||||||||||
Sbjct: 130 attgtgatgatggtaatccatgtac 154


>Contig-U12833-1 (Contig-U12833-1Q) /CSM_Contig/Contig-U12833-1Q.Seq.d
Length = 571

Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus


Query: 785 attgtgatgatggtaatccatgtac 809
|||||||||||||||||||||||||
Sbjct: 120 attgtgatgatggtaatccatgtac 144


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7138
Number of Sequences: 6905
Number of extensions: 7138
Number of successful extensions: 650
Number of sequences better than 10.0: 66
length of query: 893
length of database: 5,674,871
effective HSP length: 16
effective length of query: 877
effective length of database: 5,564,391
effective search space: 4879970907
effective search space used: 4879970907
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.12. 7
Homology vs DNA
Query= Contig-U13205-1 (Contig-U13205-1Q) /CSM_Contig/Contig-U13205-1Q.Seq.d
(893 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU061012) Dictyostelium discoideum slug cDNA, clone SLC611. 1265 0.0 1
(BJ390802) Dictyostelium discoideum cDNA clone:dds23d20, 5' ... 999 0.0 1
(BJ409212) Dictyostelium discoideum cDNA clone:dds40a04, 3' ... 718 0.0 1
(AU061445) Dictyostelium discoideum slug cDNA, clone SLE276. 40 2e-04 3
(AU061444) Dictyostelium discoideum slug cDNA, clone SLE275. 40 2e-04 3
(BJ361342) Dictyostelium discoideum cDNA clone:ddc16f21, 5' ... 40 3e-04 3
(BJ389254) Dictyostelium discoideum cDNA clone:dds18i02, 5' ... 40 3e-04 3
(BJ387899) Dictyostelium discoideum cDNA clone:dds5o16, 5' e... 40 3e-04 3
(BJ360425) Dictyostelium discoideum cDNA clone:ddc6f03, 5' e... 40 3e-04 3
(BJ359140) Dictyostelium discoideum cDNA clone:ddc13c03, 5' ... 40 4e-04 3
(BJ386959) Dictyostelium discoideum cDNA clone:dds11h17, 5' ... 40 4e-04 3
(BJ361823) Dictyostelium discoideum cDNA clone:ddc18n19, 5' ... 40 4e-04 3
(AJ548837) Dictyostelium discoideum mRNA for extracellular s... 52 0.006 2
(AU060744) Dictyostelium discoideum slug cDNA, clone SLB330. 52 0.037 1
(AU037381) Dictyostelium discoideum slug cDNA, clone SSD562. 52 0.037 1
(BJ391365) Dictyostelium discoideum cDNA clone:dds13b16, 5' ... 52 0.037 1
(BJ390182) Dictyostelium discoideum cDNA clone:dds21n11, 5' ... 52 0.037 1
(BJ390115) Dictyostelium discoideum cDNA clone:dds21p05, 5' ... 52 0.037 1
(BJ388981) Dictyostelium discoideum cDNA clone:dds17b04, 5' ... 52 0.037 1
(BJ388497) Dictyostelium discoideum cDNA clone:dds9i24, 5' e... 52 0.037 1
(BJ387082) Dictyostelium discoideum cDNA clone:dds12c08, 5' ... 52 0.037 1
(BJ387065) Dictyostelium discoideum cDNA clone:dds12n01, 5' ... 52 0.037 1
(BJ371243) Dictyostelium discoideum cDNA clone:ddc57p03, 5' ... 52 0.037 1
(BJ363167) Dictyostelium discoideum cDNA clone:ddc25l08, 5' ... 52 0.037 1
(BJ362487) Dictyostelium discoideum cDNA clone:ddc22b05, 5' ... 52 0.037 1
(BJ362435) Dictyostelium discoideum cDNA clone:ddc21c19, 5' ... 52 0.037 1
(BJ358884) Dictyostelium discoideum cDNA clone:ddc11d24, 5' ... 52 0.037 1
(BJ350825) Dictyostelium discoideum cDNA clone:dda41k06, 3' ... 52 0.037 1
(BJ337014) Dictyostelium discoideum cDNA clone:dda55o24, 5' ... 52 0.037 1
(BJ336737) Dictyostelium discoideum cDNA clone:dda54p23, 5' ... 52 0.037 1
(BJ336677) Dictyostelium discoideum cDNA clone:dda54b19, 5' ... 52 0.037 1
(BJ335355) Dictyostelium discoideum cDNA clone:dda49k19, 5' ... 52 0.037 1
(BJ330045) Dictyostelium discoideum cDNA clone:dda27n02, 5' ... 52 0.037 1
(BJ329868) Dictyostelium discoideum cDNA clone:dda26g14, 5' ... 52 0.037 1
(BJ329843) Dictyostelium discoideum cDNA clone:dda26a14, 5' ... 52 0.037 1
(BJ329757) Dictyostelium discoideum cDNA clone:dda26n02, 5' ... 52 0.037 1
(BJ329465) Dictyostelium discoideum cDNA clone:dda25e06, 5' ... 52 0.037 1
(BJ328931) Dictyostelium discoideum cDNA clone:dda30k01, 5' ... 52 0.037 1
(BJ328531) Dictyostelium discoideum cDNA clone:dda28d15, 5' ... 52 0.037 1
(BJ328080) Dictyostelium discoideum cDNA clone:dda22i22, 5' ... 52 0.037 1
(BJ327449) Dictyostelium discoideum cDNA clone:dda20b13, 5' ... 52 0.037 1
(BJ326588) Dictyostelium discoideum cDNA clone:dda17i03, 5' ... 52 0.037 1
(BJ324237) Dictyostelium discoideum cDNA clone:dda5m11, 5' e... 52 0.037 1
(AU061560) Dictyostelium discoideum slug cDNA, clone SLE635. 50 0.14 1
(AU060606) Dictyostelium discoideum slug cDNA, clone SLK625. 50 0.14 1
(C92152) Dictyostelium discoideum slug cDNA, clone SSD152. 50 0.14 1
(BJ409763) Dictyostelium discoideum cDNA clone:dds42m05, 3' ... 50 0.14 1
(BJ409582) Dictyostelium discoideum cDNA clone:dds42h16, 3' ... 50 0.14 1
(BJ409213) Dictyostelium discoideum cDNA clone:dds40a05, 3' ... 50 0.14 1
(BJ409047) Dictyostelium discoideum cDNA clone:dds47h20, 3' ... 50 0.14 1
(BJ408990) Dictyostelium discoideum cDNA clone:dds47l15, 3' ... 50 0.14 1
(BJ408985) Dictyostelium discoideum cDNA clone:dds47k14, 3' ... 50 0.14 1
(BJ408944) Dictyostelium discoideum cDNA clone:dds47a18, 3' ... 50 0.14 1
(BJ408898) Dictyostelium discoideum cDNA clone:dds47g11, 3' ... 50 0.14 1
(BJ408836) Dictyostelium discoideum cDNA clone:dds47j03, 3' ... 50 0.14 1
(BJ408812) Dictyostelium discoideum cDNA clone:dds47e02, 3' ... 50 0.14 1
(BJ408680) Dictyostelium discoideum cDNA clone:dds46i15, 3' ... 50 0.14 1
(BJ408600) Dictyostelium discoideum cDNA clone:dds46i09, 3' ... 50 0.14 1
(BJ408478) Dictyostelium discoideum cDNA clone:dds45p19, 3' ... 50 0.14 1
(BJ408396) Dictyostelium discoideum cDNA clone:dds45n17, 3' ... 50 0.14 1
(BJ408272) Dictyostelium discoideum cDNA clone:dds45d09, 3' ... 50 0.14 1
(BJ408215) Dictyostelium discoideum cDNA clone:dds45h04, 3' ... 50 0.14 1
(BJ408189) Dictyostelium discoideum cDNA clone:dds45b05, 3' ... 50 0.14 1
(BJ408124) Dictyostelium discoideum cDNA clone:dds44d20, 3' ... 50 0.14 1
(BJ408064) Dictyostelium discoideum cDNA clone:dds44h14, 3' ... 50 0.14 1
(BJ408007) Dictyostelium discoideum cDNA clone:dds44k08, 3' ... 50 0.14 1
(BJ407971) Dictyostelium discoideum cDNA clone:dds44c07, 3' ... 50 0.14 1
(BJ407882) Dictyostelium discoideum cDNA clone:dds43o24, 3' ... 50 0.14 1
(BJ407857) Dictyostelium discoideum cDNA clone:dds43k19, 3' ... 50 0.14 1
(BJ407754) Dictyostelium discoideum cDNA clone:dds43d18, 3' ... 50 0.14 1
(BJ407688) Dictyostelium discoideum cDNA clone:dds43g11, 3' ... 50 0.14 1
(BJ407639) Dictyostelium discoideum cDNA clone:dds43n04, 3' ... 50 0.14 1
(BJ407612) Dictyostelium discoideum cDNA clone:dds43i03, 3' ... 50 0.14 1
(BJ407585) Dictyostelium discoideum cDNA clone:dds43d03, 3' ... 50 0.14 1
(BJ407211) Dictyostelium discoideum cDNA clone:dds37g24, 3' ... 50 0.14 1
(BJ407120) Dictyostelium discoideum cDNA clone:dds37d17, 3' ... 50 0.14 1
(BJ407112) Dictyostelium discoideum cDNA clone:dds37c15, 3' ... 50 0.14 1
(BJ407085) Dictyostelium discoideum cDNA clone:dds37m12, 3' ... 50 0.14 1
(BJ407053) Dictyostelium discoideum cDNA clone:dds37g07, 3' ... 50 0.14 1
(BJ407009) Dictyostelium discoideum cDNA clone:dds37m04, 3' ... 50 0.14 1
(BJ406976) Dictyostelium discoideum cDNA clone:dds37f04, 3' ... 50 0.14 1
(BJ406961) Dictyostelium discoideum cDNA clone:dds37c05, 3' ... 50 0.14 1
(BJ406960) Dictyostelium discoideum cDNA clone:dds37c04, 3' ... 50 0.14 1
(BJ406873) Dictyostelium discoideum cDNA clone:dds36p18, 3' ... 50 0.14 1
(BJ406804) Dictyostelium discoideum cDNA clone:dds36b15, 3' ... 50 0.14 1
(BJ406773) Dictyostelium discoideum cDNA clone:dds36k11, 3' ... 50 0.14 1
(BJ406741) Dictyostelium discoideum cDNA clone:dds36e09, 3' ... 50 0.14 1
(BJ406722) Dictyostelium discoideum cDNA clone:dds36a11, 3' ... 50 0.14 1
(BJ406665) Dictyostelium discoideum cDNA clone:dds36d03, 3' ... 50 0.14 1
(BJ406607) Dictyostelium discoideum cDNA clone:dds35i20, 3' ... 50 0.14 1
(BJ406553) Dictyostelium discoideum cDNA clone:dds35l16, 3' ... 50 0.14 1
(BJ406506) Dictyostelium discoideum cDNA clone:dds35b16, 3' ... 50 0.14 1
(BJ406488) Dictyostelium discoideum cDNA clone:dds35n07, 3' ... 50 0.14 1
(BJ406461) Dictyostelium discoideum cDNA clone:dds35h07, 3' ... 50 0.14 1
(BJ406403) Dictyostelium discoideum cDNA clone:dds35k06, 3' ... 50 0.14 1
(BJ406402) Dictyostelium discoideum cDNA clone:dds35k04, 3' ... 50 0.14 1
(BJ406370) Dictyostelium discoideum cDNA clone:dds35e03, 3' ... 50 0.14 1
(BJ406281) Dictyostelium discoideum cDNA clone:dds34b22, 3' ... 50 0.14 1
(BJ406264) Dictyostelium discoideum cDNA clone:dds34o13, 3' ... 50 0.14 1
(BJ406255) Dictyostelium discoideum cDNA clone:dds34m14, 3' ... 50 0.14 1

>(AU061012) Dictyostelium discoideum slug cDNA, clone SLC611.
Length = 643

Score = 1265 bits (638), Expect = 0.0
Identities = 638/638 (100%)
Strand = Plus / Plus


Query: 256 ggtctttgtgatgataaagatccatgtacaaccgatctttgtgataaaggagtttgtact 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ggtctttgtgatgataaagatccatgtacaaccgatctttgtgataaaggagtttgtact 64


Query: 316 cacccaaaaattactgattgtatggcatgtaatgaaacatttgcttgtattacaacagta 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 cacccaaaaattactgattgtatggcatgtaatgaaacatttgcttgtattacaacagta 124


Query: 376 ttttgtgaatatcagatatgtagtagtgataaaacccattgtattcaaacagaaagaaat 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ttttgtgaatatcagatatgtagtagtgataaaacccattgtattcaaacagaaagaaat 184


Query: 436 tgtgatgatcaaaatgaatgcagtactgatttttgtcaaaacgatcaatgttctcattat 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tgtgatgatcaaaatgaatgcagtactgatttttgtcaaaacgatcaatgttctcattat 244


Query: 496 tttcctaaagattgtttcttgtgtggaaatcaaacctgccatgattatgacatatgctac 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tttcctaaagattgtttcttgtgtggaaatcaaacctgccatgattatgacatatgctac 304


Query: 556 ccagcctattgtgatatcagcacttccacttgtgccaacactactttgacttgtgacgat 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ccagcctattgtgatatcagcacttccacttgtgccaacactactttgacttgtgacgat 364


Query: 616 aaggacccatgtacaaaagatatttgtttttcaggaacgggttgtggatttgtaactata 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 aaggacccatgtacaaaagatatttgtttttcaggaacgggttgtggatttgtaactata 424


Query: 676 gataggtgtacaaaatgtaatgaaactgtagcatgcattgaaaaggatttatgtaaatca 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gataggtgtacaaaatgtaatgaaactgtagcatgcattgaaaaggatttatgtaaatca 484


Query: 736 ttgcaatgtcctgccgatgggtctgatgaatgtatttcctctgataagaattgtgatgat 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ttgcaatgtcctgccgatgggtctgatgaatgtatttcctctgataagaattgtgatgat 544


Query: 796 ggtaatccatgtacatattcagagtgtgatcctgaaactggttcatgtatagattcattc 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ggtaatccatgtacatattcagagtgtgatcctgaaactggttcatgtatagattcattc 604


Query: 856 attgaaggttgttcactttgttcaaagccaggtgtata 893
||||||||||||||||||||||||||||||||||||||
Sbjct: 605 attgaaggttgttcactttgttcaaagccaggtgtata 642

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,001,558,039
Number of extensions: 56607790
Number of successful extensions: 4222934
Number of sequences better than 10.0: 662
Length of query: 893
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 869
Effective length of database: 97,308,875,965
Effective search space: 84561413213585
Effective search space used: 84561413213585
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7. 6
Homology vs Protein
Query= Contig-U13205-1 (Contig-U13205-1Q) /CSM_Contig/Contig-U13205-1Q.Seq.d
(893 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54C32) RecName: Full=Protein psiQ; Flags: Precursor; 223 9e-57
(Q54C31) RecName: Full=Protein psiR; Flags: Precursor; 193 6e-48
AC117072_61(AC117072|pid:none) Dictyostelium discoideum chromoso... 147 4e-34
AC116984_103(AC116984|pid:none) Dictyostelium discoideum chromos... 141 3e-32
(P11976) RecName: Full=Prestalk protein; AltName: Full=Extracell... 138 3e-31
S44208(S44208) extracellular matrix protein B - Dictyostelium mi... 137 4e-31
A26838(A26838)prestalk protein precursor - slime mold (Dictyoste... 137 4e-31
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor; 121 4e-26
A27020(A27020)DIF-induced prestalk pDd63 protein precursor - sli... 119 2e-25
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor; 94 6e-18
(Q94494) RecName: Full=Protein psiH; Flags: Precursor; &U67940_... 89 2e-16
(Q1ZXC5) RecName: Full=Protein psiC; Flags: Precursor; 87 6e-16
(Q557E9) RecName: Full=Protein psiG; Flags: Precursor; &AC11568... 86 1e-15
(Q54FD8) RecName: Full=Protein psiD; Flags: Precursor; 83 1e-14
(Q86HT1) RecName: Full=Protein psiL; Flags: Precursor; &AC11695... 83 1e-14
(Q54VS2) RecName: Full=Protein psiP; Flags: Precursor; 77 6e-13
(Q54P69) RecName: Full=Protein psiM; Flags: Precursor; 74 7e-12
U35363_1(U35363|pid:none) Bos taurus latent TGF-beta binding pro... 73 1e-11
S82451_1(S82451|pid:none) latent transforming growth factor-beta... 72 3e-11
BC078659_1(BC078659|pid:none) Homo sapiens latent transforming g... 72 3e-11
AB209865_1(AB209865|pid:none) Homo sapiens mRNA for latent trans... 72 3e-11
(Q55FQ4) RecName: Full=Protein psiB; Flags: Precursor; 70 1e-10
AP008215_740(AP008215|pid:none) Oryza sativa (japonica cultivar-... 70 1e-10
AP005419_8(AP005419|pid:none) Oryza sativa Japonica Group genomi... 70 1e-10
CP000769_2725(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 70 1e-10
FJ501956_1(FJ501956|pid:none) Oryza sativa Indica Group keratin ... 70 1e-10
(O08999) RecName: Full=Latent-transforming growth factor beta-bi... 67 1e-09
CP000113_6723(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 67 1e-09
(O35806) RecName: Full=Latent-transforming growth factor beta-bi... 67 1e-09
(Q9NZR2) RecName: Full=Low-density lipoprotein receptor-related ... 66 2e-09
BC172897_1(BC172897|pid:none) Synthetic construct Homo sapiens c... 66 2e-09
AL845369_7(AL845369|pid:none) Zebrafish DNA sequence from clone ... 65 2e-09
AM746676_8749(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 65 3e-09
AF489528_1(AF489528|pid:none) Homo sapiens transforming growth f... 65 4e-09
A35626(A35626) transforming growth factor beta-1-binding protein... 65 4e-09
BC144128_1(BC144128|pid:none) Homo sapiens latent transforming g... 65 4e-09
AM746676_6052(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 65 4e-09
AB208801_1(AB208801|pid:none) Homo sapiens mRNA for latent trans... 65 4e-09
BC140725_1(BC140725|pid:none) Homo sapiens keratin associated pr... 63 1e-08
AJ133651_1(AJ133651|pid:none) Trichoderma harzianum cmp1 gene. 62 2e-08
AF288451_1(AF288451|pid:none) Xenopus laevis LTBP-1S protein mRN... 62 3e-08
AY805407_1(AY805407|pid:none) Danio rerio notch1b mRNA, complete... 62 3e-08
BC013622_1(BC013622|pid:none) Mus musculus very low density lipo... 62 3e-08
(P98156) RecName: Full=Very low-density lipoprotein receptor; ... 62 3e-08
CP000769_2860(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 61 4e-08
(Q07954) RecName: Full=Prolow-density lipoprotein receptor-relat... 61 4e-08
EU974210_1(EU974210|pid:none) Zea mays clone 442907 keratin-asso... 61 4e-08
BC119785_1(BC119785|pid:none) Mus musculus latent transforming g... 61 6e-08
AB210518_1(AB210518|pid:none) Ciona intestinalis mRNA for jagged... 60 8e-08
(P60409) RecName: Full=Keratin-associated protein 10-7; AltName:... 60 8e-08
AK170264_1(AK170264|pid:none) Mus musculus NOD-derived CD11c +ve... 60 8e-08
BC019207_1(BC019207|pid:none) Mus musculus low density lipoprote... 60 8e-08
(P35953) RecName: Full=Very low-density lipoprotein receptor; ... 60 1e-07
L22431_1(L22431|pid:none) Human very low density lipoprotein rec... 60 1e-07
DQ234084_1(DQ234084|pid:none) Paramecium tetraurelia A51 surface... 60 1e-07
(P98157) RecName: Full=Low-density lipoprotein receptor-related ... 60 1e-07
L33417_1(L33417|pid:none) Mus musculus very low density lipoprot... 60 1e-07
AL450467_2(AL450467|pid:none) Human DNA sequence from clone RP11... 60 1e-07
(P98155) RecName: Full=Very low-density lipoprotein receptor; ... 60 1e-07
AB208822_1(AB208822|pid:none) Homo sapiens mRNA for Very low-den... 60 1e-07
I48952(I48952;S48217) VLDL receptor precursor, long splice form ... 60 1e-07
AL805948_1(AL805948|pid:none) Mouse DNA sequence from clone RP23... 60 1e-07
AJ291489_1(AJ291489|pid:none) Paracentrotus lividus mRNA for fib... 60 1e-07
(Q9JI18) RecName: Full=Low-density lipoprotein receptor-related ... 60 1e-07
AF369477_1(AF369477|pid:none) Mus musculus strain 129P3/J lipopr... 59 2e-07
AK154429_1(AK154429|pid:none) Mus musculus NOD-derived CD11c +ve... 59 2e-07
AB076354_1(AB076354|pid:none) Homo sapiens KRTAP18.7 mRNA for ke... 59 2e-07
(Q91ZX7) RecName: Full=Prolow-density lipoprotein receptor-relat... 59 2e-07
S25111(S25111;S32554) alpha-2-macroglobulin receptor precursor -... 59 2e-07
(Q03185) RecName: Full=Major surface trophozoite antigen 11; Fla... 59 2e-07
CT033758_4(CT033758|pid:none) Mouse DNA sequence from clone RP23... 59 2e-07
DQ900937_1(DQ900937|pid:none) Ciona intestinalis gamma-carboxygl... 59 2e-07
BC094612_1(BC094612|pid:none) Mus musculus latent transforming g... 59 2e-07
(Q8CIR0) RecName: Full=Latent-transforming growth factor beta-bi... 59 2e-07
AB100603_1(AB100603|pid:none) Mus musculus Notch1 gene for trans... 59 3e-07
(P46531) RecName: Full=Neurogenic locus notch homolog protein 1;... 59 3e-07
AB100603_2(AB100603|pid:none) Mus musculus Notch1 gene for trans... 59 3e-07
(Q01705) RecName: Full=Neurogenic locus notch homolog protein 1;... 59 3e-07
AF508809_1(AF508809|pid:none) Mus musculus notch 1 protein mRNA,... 59 3e-07
BC151354_1(BC151354|pid:none) Bos taurus latent transforming gro... 58 4e-07
CR352252_1(CR352252|pid:none) Zebrafish DNA sequence from clone ... 58 4e-07
AL592545_3(AL592545|pid:none) Mouse DNA sequence from clone RP23... 58 4e-07
AK302554_1(AK302554|pid:none) Homo sapiens cDNA FLJ51576 complet... 58 5e-07
(P78504) RecName: Full=Protein jagged-1; Short=Jagged1;... 58 5e-07
AK312722_1(AK312722|pid:none) Homo sapiens cDNA, FLJ93126, highl... 58 5e-07
U61276_1(U61276|pid:none) Human transmembrane protein Jagged 1 (... 58 5e-07
BC098393_1(BC098393|pid:none) Homo sapiens jagged 1 (Alagille sy... 58 5e-07
T29764(T29764)hypothetical protein T21E3.3 - Caenorhabditis eleg... 57 6e-07
(A2ARV4) RecName: Full=Low-density lipoprotein receptor-related ... 57 6e-07
AM746676_2497(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 57 6e-07
AY265358_1(AY265358|pid:none) Homo sapiens glycoprotein receptor... 57 8e-07
AC007556_2(AC007556|pid:none) Homo sapiens BAC clone RP11-18C9 f... 57 8e-07
(P98164) RecName: Full=Low-density lipoprotein receptor-related ... 57 8e-07
AY265357_1(AY265357|pid:none) Homo sapiens glycoprotein receptor... 57 8e-07
AF308602_1(AF308602|pid:none) Homo sapiens NOTCH 1 (N1) mRNA, co... 57 1e-06
BC172642_1(BC172642|pid:none) Synthetic construct Mus musculus c... 57 1e-06
(Q9QXX0) RecName: Full=Protein jagged-1; Short=Jagged1;... 57 1e-06
(P46530) RecName: Full=Neurogenic locus notch homolog protein 1;... 56 1e-06
AK295090_1(AK295090|pid:none) Homo sapiens cDNA FLJ50960 complet... 56 1e-06
A56136(A56136)jagged protein precursor - rat 56 1e-06
AC116956_34(AC116956|pid:none) Dictyostelium discoideum chromoso... 56 1e-06
AK302589_1(AK302589|pid:none) Homo sapiens cDNA FLJ51150 complet... 56 1e-06
AY627686_1(AY627686|pid:none) Didelphis virginiana megalin mRNA,... 56 2e-06
(P35950) RecName: Full=Low-density lipoprotein receptor; ... 56 2e-06
AF016537_1(AF016537|pid:none) Bos taurus very low density lipopr... 56 2e-06
FN357468_8(FN357468|pid:none) Schistosoma mansoni genome sequenc... 56 2e-06
(P35951) RecName: Full=Low-density lipoprotein receptor; ... 56 2e-06
U73710_1(U73710|pid:none) Entamoeba dispar Gal/GalNAc-inhibitabl... 56 2e-06
AM494941_25(AM494941|pid:none) Leishmania braziliensis chromosom... 56 2e-06
Y12539_1(Y12539|pid:none) Branchiostoma floridae mRNA for putati... 55 2e-06
AK295878_1(AK295878|pid:none) Homo sapiens cDNA FLJ50970 complet... 55 2e-06
AM746676_5937(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 55 2e-06
AE014297_4006(AE014297|pid:none) Drosophila melanogaster chromos... 55 3e-06
AF007248_1(AF007248|pid:none) Mus musculus mutant fibrillin-1 (F... 55 3e-06
U54641_1(U54641|pid:none) Chironomus thummi 220 kDa silk protein... 55 3e-06
EU972808_1(EU972808|pid:none) Zea mays clone 388422 unknown mRNA. 55 3e-06
AB209873_1(AB209873|pid:none) Homo sapiens mRNA for notch1 prepr... 55 3e-06
CT025750_1(CT025750|pid:none) Zebrafish DNA sequence from clone ... 55 3e-06
CP001131_1246(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 55 3e-06
DQ205425_1(DQ205425|pid:none) Fenneropenaeus chinensis putative ... 55 3e-06
D87558_1(D87558|pid:none) Gallus gallus mRNA for C-Serrate-2, pa... 55 3e-06
AE014297_4009(AE014297|pid:none) Drosophila melanogaster chromos... 55 3e-06
A35844(A35844)Xotch protein - African clawed frog 55 3e-06
(P21783) RecName: Full=Neurogenic locus notch protein homolog; ... 55 3e-06
(P35555) RecName: Full=Fibrillin-1; Flags: Precursor; &L13923_1... 55 4e-06
X63556_1(X63556|pid:none) H.sapiens mRNA for fibrillin. 55 4e-06
U19972_1(U19972|pid:none) Mus musculus fibrillin-1 mRNA, partial... 55 4e-06
(Q04721) RecName: Full=Neurogenic locus notch homolog protein 2;... 55 4e-06
AK298027_1(AK298027|pid:none) Homo sapiens cDNA FLJ51010 complet... 55 4e-06
AF308601_1(AF308601|pid:none) Homo sapiens NOTCH 2 (N2) mRNA, co... 55 4e-06
AX357059_1(AX357059|pid:none) Sequence 21 from Patent EP1175909.... 55 4e-06
T13171(T13171) probable vitellogenin receptor - fruit fly (Droso... 55 4e-06
AB177802_1(AB177802|pid:none) Homo sapiens FBN1 gene for fibrill... 55 4e-06
(A8MXZ3) RecName: Full=Putative keratin-associated protein 9-2-l... 54 5e-06
A23475(A23475)G surface protein - Paramecium primaurelia 54 5e-06
AM055942_182(AM055942|pid:none) Toxoplasma gondii RH, genomic DN... 54 5e-06
L36118_1(L36118|pid:none) Chiloscyllium plagiosum low-density li... 54 5e-06
(P17053) RecName: Full=G surface protein, allelic form 168; Flag... 54 7e-06
BC163556_1(BC163556|pid:none) Danio rerio tenascin C, mRNA (cDNA... 54 9e-06
(Q61554) RecName: Full=Fibrillin-1; Flags: Precursor; &A55624(A... 54 9e-06
T16840(T16840)hypothetical protein T10E10.4 - Caenorhabditis ele... 53 1e-05
AF410799_1(AF410799|pid:none) Mus musculus latent transforming g... 53 1e-05
BC141005_1(BC141005|pid:none) Mus musculus latent transforming g... 53 1e-05
AK147753_1(AK147753|pid:none) Mus musculus melanocyte cDNA, RIKE... 53 1e-05
DQ103506_1(DQ103506|pid:none) Dermacentor variabilis vitellogeni... 53 1e-05
(P59222) RecName: Full=Scavenger receptor class F member 2; AltN... 53 1e-05
AF033584_1(AF033584|pid:none) Giardia intestinalis variant-speci... 53 1e-05
U39644_2(U39644|pid:none) Caenorhabditis elegans cosmid T10E10, ... 53 1e-05
CP001131_2828(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 53 2e-05
AE014297_3999(AE014297|pid:none) Drosophila melanogaster chromos... 53 2e-05
AB201473_1(AB201473|pid:none) Bombyx mori LpR3 mRNA for lipophor... 53 2e-05
(A8MX34) RecName: Full=Putative keratin-associated protein 10-li... 52 2e-05
(Q95209) RecName: Full=Sortilin-related receptor; AltName: Full=... 52 2e-05
AY540953_1(AY540953|pid:none) Strongylocentrotus purpuratus prot... 52 2e-05
AY262832_1(AY262832|pid:none) Solenopsis invicta vitellogenin re... 52 2e-05
AB015790_1(AB015790|pid:none) Mus musculus mRNA for LR11, comple... 52 2e-05
AM746676_9366(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 52 2e-05
AL844547_6(AL844547|pid:none) Mouse DNA sequence from clone RP23... 52 2e-05
BX004856_1(BX004856|pid:none) Zebrafish DNA sequence from clone ... 52 3e-05
(Q99087) RecName: Full=Low-density lipoprotein receptor 1; ... 52 3e-05
(P60411) RecName: Full=Keratin-associated protein 10-9; AltName:... 52 3e-05
DQ096731_1(DQ096731|pid:none) Danio rerio tenascin-C (TNC) mRNA,... 52 3e-05
AK137635_1(AK137635|pid:none) Mus musculus adult female vagina c... 52 3e-05
(Q6L8H2) RecName: Full=Keratin-associated protein 5-3; AltName: ... 52 3e-05
AB209707_1(AB209707|pid:none) Homo sapiens mRNA for low density ... 52 3e-05
BC170345_1(BC170345|pid:none) Xenopus laevis low density lipopro... 52 3e-05
AY901988_1(AY901988|pid:none) Xenopus laevis proprotein converta... 52 3e-05
AM050637_1(AM050637|pid:none) Blattella germanica mRNA for vitel... 52 3e-05
QRXLL1(A40388)LDL receptor 1 precursor - African clawed frog 52 3e-05
QRXLL2(B40388)LDL receptor 2 precursor - African clawed frog 52 3e-05
(O88307) RecName: Full=Sortilin-related receptor; AltName: Full=... 52 3e-05
AF283408_1(AF283408|pid:none) Homo sapiens candidate tumor suppr... 52 3e-05
BC172899_1(BC172899|pid:none) Synthetic construct Homo sapiens c... 52 3e-05
AL035436_2(AL035436|pid:none) Drosophila melanogaster cosmid clo... 52 3e-05
AC068195_1(AC068195|pid:none) Homo sapiens BAC clone RP11-114B24... 52 3e-05
CP001328_607(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 52 3e-05
AM746676_1040(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 52 3e-05
(P60412) RecName: Full=Keratin-associated protein 10-11; AltName... 52 3e-05
M16152_1(M16152|pid:none) Drosophila melanogaster Notch growth f... 52 3e-05
AK147303_1(AK147303|pid:none) Mus musculus adult male brain UNDE... 52 3e-05
AK029528_1(AK029528|pid:none) Mus musculus adult male testis cDN... 52 3e-05
AF374376_24(AF374376|pid:none) Oikopleura dioica clone BAC clone... 52 3e-05
AL844509_613(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 52 3e-05
BC131611_1(BC131611|pid:none) Homo sapiens keratin associated pr... 52 3e-05
AB201472_1(AB201472|pid:none) Bombyx mori LpR2 mRNA for lipophor... 52 3e-05
BX510920_1(BX510920|pid:none) Zebrafish DNA sequence from clone ... 52 3e-05
AB201474_1(AB201474|pid:none) Bombyx mori LpR4 mRNA for lipophor... 52 3e-05
AC115680_32(AC115680|pid:none) Dictyostelium discoideum chromoso... 52 3e-05
(Q9R160) RecName: Full=Disintegrin and metalloproteinase domain-... 52 3e-05
(P98158) RecName: Full=Low-density lipoprotein receptor-related ... 52 3e-05
L14815_1(L14815|pid:none) Entamoeba histolytica HM-1:IMSS galact... 52 3e-05
BC120950_1(BC120950|pid:none) Homo sapiens keratin associated pr... 51 5e-05
AF501275_1(AF501275|pid:none) Entamoeba histolytica clone C3 Gal... 51 5e-05
AM494941_66(AM494941|pid:none) Leishmania braziliensis chromosom... 51 5e-05
BC047187_1(BC047187|pid:none) Danio rerio very low density lipop... 51 5e-05
AK049346_1(AK049346|pid:none) Mus musculus ES cells cDNA, RIKEN ... 51 5e-05
AB210038_1(AB210038|pid:none) Homo sapiens mRNA for TNC variant ... 51 6e-05
A49175(A49175;PH1570;S32113) Motch B protein - mouse (fragment) ... 51 6e-05
AE014298_418(AE014298|pid:none) Drosophila melanogaster chromoso... 51 6e-05
AF051345_1(AF051345|pid:none) Homo sapiens latent transforming g... 51 6e-05
(Q8N2S1) RecName: Full=Latent-transforming growth factor beta-bi... 51 6e-05
CR759822_3(CR759822|pid:none) Zebrafish DNA sequence from clone ... 51 6e-05
(Q99088) RecName: Full=Low-density lipoprotein receptor 2; ... 51 6e-05
C42125(C42125)trophozoite cysteine-rich surface antigen 72 - Gia... 51 6e-05
AE014298_423(AE014298|pid:none) Drosophila melanogaster chromoso... 51 6e-05
AE014298_417(AE014298|pid:none) Drosophila melanogaster chromoso... 51 6e-05
(P60370) RecName: Full=Keratin-associated protein 10-5; AltName:... 51 6e-05
AE014298_420(AE014298|pid:none) Drosophila melanogaster chromoso... 51 6e-05
S18188(S18188)notch protein homolog - rat 51 6e-05
AF135059_1(AF135059|pid:none) Rattus norvegicus fibrillin-1 mRNA... 51 6e-05
BX276181_1(BX276181|pid:none) Zebrafish DNA sequence from clone ... 51 6e-05
AF051344_1(AF051344|pid:none) Homo sapiens latent transforming g... 51 6e-05
BC157687_1(BC157687|pid:none) Xenopus tropicalis hypothetical pr... 51 6e-05
Y13622_1(Y13622|pid:none) Homo sapiens mRNA for latent transform... 51 6e-05
AB076352_1(AB076352|pid:none) Homo sapiens KRTAP18.5 mRNA for ke... 51 6e-05
AL138972_3(AL138972|pid:none) Drosophila melanogaster BAC clone ... 51 6e-05
AP007155_961(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 51 6e-05
AM746676_2058(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 51 6e-05
X56160_1(X56160|pid:none) Human mRNA for tenascin. 51 6e-05
AK304015_1(AK304015|pid:none) Homo sapiens cDNA FLJ60213 complet... 51 6e-05
AE014298_419(AE014298|pid:none) Drosophila melanogaster chromoso... 51 6e-05
EF133884_1(EF133884|pid:none) Alexandrium fundyense strain GT-CA... 50 8e-05
AY901987_1(AY901987|pid:none) Xenopus laevis proprotein converta... 50 8e-05
AE014297_4237(AE014297|pid:none) Drosophila melanogaster chromos... 50 8e-05
BC149826_1(BC149826|pid:none) Bos taurus keratin associated prot... 50 8e-05
BC136667_1(BC136667|pid:none) Homo sapiens low density lipoprote... 50 8e-05
CP000113_1974(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 50 8e-05
AB231861_1(AB231861|pid:none) Homo sapiens KIAA0816 mRNA for low... 50 8e-05
(P24821) RecName: Full=Tenascin; Short=TN; AltName: Ful... 50 8e-05
AB084910_1(AB084910|pid:none) Homo sapiens LRP10 mRNA for low de... 50 8e-05
AB384531_1(AB384531|pid:none) Synthetic construct DNA, clone: pF... 50 8e-05
Y12004_1(Y12004|pid:none) M.musculus mRNA for receptor LR11/gp25... 50 8e-05
EU273942_1(EU273942|pid:none) Amphimedon queenslandica notch mRN... 50 8e-05
AX805769_1(AX805769|pid:none) Sequence 1 from Patent WO03060109.... 50 1e-04
AF514281_1(AF514281|pid:none) Oreochromis aureus vitellogenin re... 50 1e-04
AL353607_3(AL353607|pid:none) Human DNA sequence from clone RP11... 50 1e-04
(P46023) RecName: Full=G-protein coupled receptor GRL101; Flags:... 50 1e-04
U58746_6(U58746|pid:none) Caenorhabditis elegans cosmid R05G6, c... 50 1e-04
AB052951_1(AB052951|pid:none) Homo sapiens mRNA for SRECRP-1, co... 50 1e-04
AF522196_1(AF522196|pid:none) Homo sapiens scavenger receptor ty... 50 1e-04
FJ039902_1(FJ039902|pid:none) Triticum aestivum DEP1 (DEP1) mRNA... 50 1e-04
AY553633_1(AY553633|pid:none) Paramecium primaurelia surface ant... 50 1e-04
AY901986_1(AY901986|pid:none) Xenopus laevis proprotein converta... 50 1e-04
AB031297_1(AB031297|pid:none) Sarcophaga peregrina mRNA for 120-... 50 1e-04
AL606536_6(AL606536|pid:none) Mouse DNA sequence from clone RP23... 50 1e-04
FN357317_8(FN357317|pid:none) Schistosoma mansoni genome sequenc... 50 1e-04
EU955480_1(EU955480|pid:none) Zea mays clone 1534022 unknown mRNA. 50 1e-04
Z98877_13(Z98877|pid:none) Caenorhabditis elegans YAC Y69H2, com... 50 1e-04
BC151843_1(BC151843|pid:none) Homo sapiens tenascin C, mRNA (cDN... 50 1e-04
AY173044_1(AY173044|pid:none) Oncorhynchus mykiss latent transfo... 50 1e-04
U03272_1(U03272|pid:none) Human fibrillin-2 mRNA, complete cds. 49 2e-04
AK133113_1(AK133113|pid:none) Mus musculus adult male testis cDN... 49 2e-04
AK295005_1(AK295005|pid:none) Homo sapiens cDNA FLJ61253 complet... 49 2e-04
AB121210_1(AB121210|pid:none) Marsupenaeus japonicus mjTSPb mRNA... 49 2e-04
DQ310728_1(DQ310728|pid:none) Xenopus laevis fibrillin mRNA, par... 49 2e-04
X99794_1(X99794|pid:none) R.norvegicus mRNA for fertilin beta. 49 2e-04
AY142124_1(AY142124|pid:none) Giardia intestinalis isolate WB cl... 49 2e-04
BT072095_1(BT072095|pid:none) Salmo salar clone ssal-rgf-511-120... 49 2e-04
AF184615_1(AF184615|pid:none) Branchiostoma californiense propro... 49 2e-04
AF289202_1(AF289202|pid:none) Caenorhabditis elegans transmembra... 49 2e-04
AJ507288_1(AJ507288|pid:none) Cupiennius salei partial mRNA for ... 49 2e-04
Z83743_1(Z83743|pid:none) G.duodenalis gene encoding variant-spe... 49 2e-04
DQ091254_1(DQ091254|pid:none) Fenneropenaeus chinensis thrombosp... 49 2e-04
AB255883_1(AB255883|pid:none) Rhyparobia maderae VgR mRNA for vi... 49 2e-04
AF184617_1(AF184617|pid:none) Branchiostoma californiense propro... 49 2e-04
BT011327_1(BT011327|pid:none) Drosophila melanogaster SD22390 fu... 49 2e-04
AM746676_4982(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 49 2e-04
AF406641_1(AF406641|pid:none) Mus musculus crumbs-like protein 1... 49 2e-04
AY540956_1(AY540956|pid:none) Lytechinus variegatus soft fertili... 49 3e-04
AE014297_4001(AE014297|pid:none) Drosophila melanogaster chromos... 49 3e-04
U13646_1(U13646|pid:none) Caenorhabditis elegans cosmid ZK783, c... 49 3e-04
AB154832_1(AB154832|pid:none) Halocynthia roretzi HrITGB2 mRNA f... 49 3e-04
AM502222_18(AM502222|pid:none) Leishmania infantum chromosome 4. 49 3e-04
BC084953_1(BC084953|pid:none) Xenopus laevis X-Serrate-1 protein... 49 3e-04
AY173045_1(AY173045|pid:none) Morone americana vitellogenin rece... 49 3e-04
U28735_10(U28735|pid:none) Caenorhabditis elegans cosmid F48E3, ... 49 3e-04
EU244479_1(EU244479|pid:none) Entamoeba histolytica Gal/GalNAc l... 49 3e-04
AE014297_4000(AE014297|pid:none) Drosophila melanogaster chromos... 49 3e-04
EU072820_1(EU072820|pid:none) Drosophila americana isolate IR04.... 49 3e-04
T34513(T34513)hypothetical protein ZK783.1 - Caenorhabditis eleg... 49 3e-04
EU072824_1(EU072824|pid:none) Drosophila americana isolate IR04.... 49 3e-04
DQ917570_1(DQ917570|pid:none) Parhyale hawaiensis delta protein ... 49 3e-04
AL590997_30(AL590997|pid:none) Mouse DNA sequence from clone RP2... 48 4e-04
DQ917572_1(DQ917572|pid:none) Parhyale hawaiensis notch protein ... 48 4e-04
CP000113_6200(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 48 4e-04
EU854565_1(EU854565|pid:none) Danio rerio fibrillin 4 (fbn4) mRN... 48 4e-04
AL389894_18(AL389894|pid:none) Leishmania major Friedlin chromos... 48 4e-04
(A8MUX0) RecName: Full=Putative keratin-associated protein 10-li... 48 4e-04
(Q28832) RecName: Full=Low-density lipoprotein receptor; ... 48 4e-04
X96557_1(X96557|pid:none) P.tetraurlia epsilon-51D gene. 48 4e-04
(Q9W6V6) RecName: Full=Teneurin-1; Short=Ten-1; AltName... 48 5e-04
BC104354_1(BC104354|pid:none) Mus musculus predicted gene, ENSMU... 48 5e-04
AM746676_3301(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 48 5e-04
AL929049_5(AL929049|pid:none) Zebrafish DNA sequence from clone ... 48 5e-04
AB001327_1(AB001327|pid:none) Halocynthia roretzi mRNA for HrNot... 48 5e-04
AM403063_1(AM403063|pid:none) Blattella germanica mRNA for lipop... 48 5e-04
AY901989_1(AY901989|pid:none) Xenopus laevis proprotein converta... 48 5e-04
AM403064_1(AM403064|pid:none) Blattella germanica mRNA for lipop... 48 5e-04
(A8MTY7) RecName: Full=Putative keratin-associated protein 9-2-l... 48 5e-04
AB112441_1(AB112441|pid:none) Ciona intestinalis Ci-VWFL1 mRNA f... 48 5e-04
AM910990_169(AM910990|pid:none) Plasmodium knowlesi strain H chr... 48 5e-04
EU596506_1(EU596506|pid:none) Rattus norvegicus tenascin C (Tnc)... 48 5e-04
AK304737_1(AK304737|pid:none) Homo sapiens cDNA FLJ61597 partial... 48 5e-04
CP000251_2747(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 48 5e-04
A48089(A48089;S37437) growth arrest-specific protein gas6 - mous... 47 7e-04
T28674(T28674) alpha-51D-immobilization antigen - Paramecium tet... 47 7e-04
AY074792_1(AY074792|pid:none) Strongylocentrotus purpuratus delt... 47 7e-04
AF501273_1(AF501273|pid:none) Entamoeba histolytica clone C1 Gal... 47 7e-04
DQ900934_1(DQ900934|pid:none) Ciona intestinalis gamma-carboxygl... 47 7e-04
BC080070_1(BC080070|pid:none) Xenopus laevis delta/notch-like EG... 47 7e-04
AF067952_1(AF067952|pid:none) Sus scrofa low density lipoprotein... 47 7e-04
AM746676_988(AM746676|pid:none) Sorangium cellulosum 'So ce 56' ... 47 7e-04
EU675625_1(EU675625|pid:none) Hirudo medicinalis beta-integrin m... 47 7e-04
T29359(T29359)hypothetical protein R05G6.9 - Caenorhabditis eleg... 47 7e-04
(Q8IWY4) RecName: Full=Signal peptide, CUB and EGF-like domain-c... 47 7e-04
(Q8JZM4) RecName: Full=Delta and Notch-like epidermal growth fac... 47 9e-04
M33753_1(M33753|pid:none) D.melanogaster crumbs protein mRNA, co... 47 9e-04
BC119472_1(BC119472|pid:none) Mus musculus predicted gene, OTTMU... 47 9e-04
AY765220_1(AY765220|pid:none) Tetrahymena pyriformis GL metallot... 47 9e-04
U69614_1(U69614|pid:none) Mus musculus TNF-alpha converting enzy... 47 9e-04
U28971_1(U28971|pid:none) Caenorhabditis elegans cosmid B0244, c... 47 9e-04
(P10040) RecName: Full=Protein crumbs; AltName: Full=95F; Flags:... 47 9e-04
AB077047_1(AB077047|pid:none) Periplaneta americana VgR mRNA for... 47 9e-04
AM746676_4349(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 47 9e-04
AJ536342_1(AJ536342|pid:none) Glomeris marginata partial mRNA fo... 47 9e-04
AF056359_1(AF056359|pid:none) Mus musculus tumor necrosis factor... 47 9e-04
B88465(B88465)protein B0244.8 [imported] - Caenorhabditis elegans 47 9e-04
CP000099_1162(CP000099|pid:none) Methanosarcina barkeri str. Fus... 47 9e-04
FJ222591_1(FJ222591|pid:none) Periplaneta americana Notch protei... 47 9e-04
AL590997_31(AL590997|pid:none) Mouse DNA sequence from clone RP2... 47 9e-04
AK144161_1(AK144161|pid:none) Mus musculus RCB-0464 Meth-A cDNA,... 47 0.001
AY628699_2(AY628699|pid:none) Sea perch iridovirus strain CH-1 O... 47 0.001
BC145270_1(BC145270|pid:none) Mus musculus a disintegrin and met... 47 0.001
AF370126_1(AF370126|pid:none) Mus musculus brain EGF repeat-cont... 47 0.001
AM746676_2642(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 47 0.001
AL590997_34(AL590997|pid:none) Mouse DNA sequence from clone RP2... 47 0.001
AF051401_1(AF051401|pid:none) Caenorhabditis elegans fibulin-1 i... 47 0.001
AB177798_1(AB177798|pid:none) Homo sapiens FBN3 gene for fibrill... 47 0.001
AJ007365_1(AJ007365|pid:none) Mus musculus mRNA for TNF-alpha co... 47 0.001
AB177799_1(AB177799|pid:none) Homo sapiens FBN3 gene for fibrill... 47 0.001
AB384635_1(AB384635|pid:none) Synthetic construct DNA, clone: pF... 47 0.001
AK137693_1(AK137693|pid:none) Mus musculus adult female vagina c... 47 0.001
BC145886_1(BC145886|pid:none) Mus musculus sushi, nidogen and EG... 47 0.001
AB209498_1(AB209498|pid:none) Homo sapiens mRNA for low density ... 47 0.001
(Q75N90) RecName: Full=Fibrillin-3; Flags: Precursor; &AY165863... 47 0.001
BC138420_1(BC138420|pid:none) Mus musculus a disintegrin and met... 47 0.001
X08030_1(X08030|pid:none) Chicken mRNA fragment for tenascin (cT... 47 0.001
(P60014) RecName: Full=Keratin-associated protein 10-10; AltName... 47 0.001
(Q3U515) RecName: Full=von Willebrand factor C and EGF domain-co... 47 0.001
A30363(A30363)glycoprotein GP330, renal - rat (fragments) 47 0.001
EU854566_1(EU854566|pid:none) Danio rerio fibrillin 4 (fbn4) mRN... 47 0.001
X55077_1(X55077|pid:none) H.sapiens mRNA fragment for alpha-2 ma... 47 0.001
(Q70E20) RecName: Full=Sushi, nidogen and EGF-like domain-contai... 47 0.001
AY661545_1(AY661545|pid:none) Olive flounder iridovirus laminin-... 47 0.001
AK139471_1(AK139471|pid:none) Mus musculus 10 days neonate corte... 47 0.001
CR940348_367(CR940348|pid:none) Theileria annulata strain Ankara... 47 0.001
U57753_1(U57753|pid:none) Strongylocentrotus purpuratus SFE1 mRN... 47 0.001
BC138416_1(BC138416|pid:none) Mus musculus a disintegrin and met... 47 0.001
AF070477_1(AF070477|pid:none) Caenorhabditis elegans fibulin-1D ... 47 0.001
AK296312_1(AK296312|pid:none) Homo sapiens cDNA FLJ50552 complet... 46 0.001
AL591711_9(AL591711|pid:none) Mouse DNA sequence from clone RP23... 46 0.001
AF483064_1(AF483064|pid:none) Boltenia villosa EGF repeat-contai... 46 0.001
AY313175_1(AY313175|pid:none) Cricetulus griseus tumor necrosis ... 46 0.001
AC080162_4(AC080162|pid:none) Homo sapiens BAC clone RP11-400L8 ... 46 0.001
AB006906_1(AB006906|pid:none) Xenopus laevis mRNA for vitellogen... 46 0.001
U92649_1(U92649|pid:none) Homo sapiens snake venom-like protease... 46 0.001
BC162451_1(BC162451|pid:none) Danio rerio crumbs homolog 2, mRNA... 46 0.001
AM746676_7193(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 46 0.001
AM746676_6862(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 46 0.001
AM746676_6867(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 46 0.001
(P35952) RecName: Full=Low-density lipoprotein receptor; ... 46 0.001
AF380348_1(AF380348|pid:none) Cricetulus griseus tumor necrosis ... 46 0.001
(P78536) RecName: Full=Disintegrin and metalloproteinase domain-... 46 0.001
(P0C7B0) RecName: Full=Zinc metalloproteinase-disintegrin brevil... 46 0.001
AY313173_1(AY313173|pid:none) Cricetulus griseus tumor necrosis ... 46 0.001
U76764_1(U76764|pid:none) Human CD97 mRNA, complete cds. 46 0.002
AF353165_1(AF353165|pid:none) Toxoplasma gondii microneme protei... 46 0.002
AY944632_1(AY944632|pid:none) Aspergillus fumigatus ADAM proteas... 46 0.002
AB287424_1(AB287424|pid:none) Entamoeba dispar igl2 mRNA for int... 46 0.002
AF315556_1(AF315556|pid:none) Caenorhabditis remanei notch-like ... 46 0.002
DQ812528_1(DQ812528|pid:none) Spironucleus barkhanus isolate Sp1... 46 0.002
CU638743_587(CU638743|pid:none) Podospora anserina genomic DNA c... 46 0.002
X02294_1(X02294|pid:none) Paramecium 3' gene fragment for G surf... 46 0.002
AF525689_1(AF525689|pid:none) Homo sapiens signal peptide-CUB-EG... 46 0.002
BC104358_1(BC104358|pid:none) Mus musculus predicted gene, OTTMU... 46 0.002
BX004766_1(BX004766|pid:none) Zebrafish DNA sequence from clone ... 46 0.002
BC069560_1(BC069560|pid:none) Homo sapiens keratin associated pr... 46 0.002
BC076994_1(BC076994|pid:none) Xenopus tropicalis MGC89623 protei... 46 0.002
AF229450_1(AF229450|pid:none) Danio rerio jagged2 (jag2) mRNA, c... 46 0.002
AY218841_2(AY218841|pid:none) Danio rerio clone BUSM1-81J4 brahm... 46 0.002
U66889_1(U66889|pid:none) Mus musculus Emr1 mRNA, alternatively ... 46 0.002
AB003753_1(AB003753|pid:none) Rattus norvegicus genes for high s... 46 0.002
BT072617_1(BT072617|pid:none) Salmo salar clone ssal-rgf-532-233... 46 0.002
(Q61549) RecName: Full=EGF-like module-containing mucin-like hor... 46 0.002
AF337950_1(AF337950|pid:none) Entamoeba histolytica Gal/GalNAc l... 46 0.002
(Q14622) RecName: Full=Integrin beta-1; AltName: Full=Fibronecti... 45 0.003
BT001537_1(BT001537|pid:none) Drosophila melanogaster RE08405 fu... 45 0.003
AK131904_1(AK131904|pid:none) Mus musculus adult male tongue cDN... 45 0.003
AE014297_1647(AE014297|pid:none) Drosophila melanogaster chromos... 45 0.003
AL355483_3(AL355483|pid:none) Human DNA sequence from clone RP4-... 45 0.003
AE014297_1646(AE014297|pid:none) Drosophila melanogaster chromos... 45 0.003
QRRTLD(S03430;S05076;B48908)LDL receptor precursor - rat 45 0.003
AE014297_1645(AE014297|pid:none) Drosophila melanogaster chromos... 45 0.003
X96556_1(X96556|pid:none) P.tetraurelia epsilon-51D gene. 45 0.003
AM746676_4565(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 45 0.003
AB095016_1(AB095016|pid:none) Cynops pyrrhogaster Notch-1 mRNA f... 45 0.003
BT045323_1(BT045323|pid:none) Salmo salar clone ssal-rgf-518-160... 45 0.003
AL355483_2(AL355483|pid:none) Human DNA sequence from clone RP4-... 45 0.003
B27079(B27079) fibronectin receptor beta chain precursor - human... 45 0.003
(Q9WTS4) RecName: Full=Teneurin-1; Short=Ten-1; AltName... 45 0.003
AF135060_1(AF135060|pid:none) Rattus norvegicus fibrillin-2 mRNA... 45 0.003
(Q61555) RecName: Full=Fibrillin-2; Flags: Precursor; &A57278(A... 45 0.003
AB112442_1(AB112442|pid:none) Ciona intestinalis Ci-VWFL2 mRNA f... 45 0.003
BX537407_1(BX537407|pid:none) Homo sapiens mRNA; cDNA DKFZp686D0... 45 0.003
(P48960) RecName: Full=CD97 antigen; AltName: Full=Leukocyte ant... 45 0.003
(Q9Z1K9) RecName: Full=Disintegrin and metalloproteinase domain-... 45 0.003
AY027889_1(AY027889|pid:none) Aedes aegypti vitellogenin recepto... 45 0.003
AK035388_1(AK035388|pid:none) Mus musculus adult male urinary bl... 45 0.003
DQ482581_1(DQ482581|pid:none) Galleria mellonella lipophorin rec... 45 0.003
AK159646_1(AK159646|pid:none) Mus musculus osteoclast-like cell ... 45 0.003
D50678_1(D50678|pid:none) Homo sapiens mRNA for apolipoprotein E... 45 0.003
BC127004_1(BC127004|pid:none) Homo sapiens egf-like module conta... 45 0.003
AF065168_1(AF065168|pid:none) Giardia intestinalis variant-speci... 45 0.003
U20217_1(U20217|pid:none) Mus musculus fibrillin-2 mRNA, partial... 45 0.003
AM270078_56(AM270078|pid:none) Aspergillus niger contig An04c017... 45 0.003
CS208045_1(CS208045|pid:none) Sequence 54 from Patent WO20050798... 45 0.003
AF159157_1(AF159157|pid:none) Hydra vulgaris head-activator bind... 45 0.003
A54105(A54105;S17063;S31101)fibrillin-2 precursor - human 45 0.003
(P20063) RecName: Full=Low-density lipoprotein receptor; ... 45 0.003
AE014134_3107(AE014134|pid:none) Drosophila melanogaster chromos... 45 0.003
AE014134_2532(AE014134|pid:none) Drosophila melanogaster chromos... 45 0.003
S78040(S78040;S78560;S36440)fibulin, splice form C precursor - m... 45 0.003
AK220196_1(AK220196|pid:none) Mus musculus mRNA for mKIAA4226 pr... 45 0.003
CR555293_1(CR555293|pid:none) Zebrafish DNA sequence from clone ... 45 0.003
(P13508) RecName: Full=Protein glp-1; Flags: Precursor; &A32901... 45 0.003
(Q14114) RecName: Full=Low-density lipoprotein receptor-related ... 45 0.003
BC051836_1(BC051836|pid:none) Homo sapiens low density lipoprote... 45 0.003
AF499438_1(AF499438|pid:none) Caenorhabditis briggsae notch-like... 45 0.004
(O93518) RecName: Full=Zinc metalloproteinase/disintegrin; Conta... 45 0.004
BC108458_1(BC108458|pid:none) Xenopus laevis hypothetical protei... 45 0.004
AY251285_1(AY251285|pid:none) Rattus norvegicus corin mRNA, comp... 45 0.004
BC163889_1(BC163889|pid:none) Danio rerio jagged 2, mRNA (cDNA c... 45 0.004
AB304798_1(AB304798|pid:none) Marsupenaeus japonicus mRNA for pu... 45 0.004
Z98877_10(Z98877|pid:none) Caenorhabditis elegans YAC Y69H2, com... 45 0.004
AF090432_1(AF090432|pid:none) Danio rerio serrateB mRNA, complet... 45 0.004
CP001390_3639(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 45 0.004
AM746676_1800(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 44 0.006
AC116963_42(AC116963|pid:none) Dictyostelium discoideum chromoso... 44 0.006
AM502222_19(AM502222|pid:none) Leishmania infantum chromosome 4. 44 0.006
AM746676_5248(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 44 0.006
AK035019_1(AK035019|pid:none) Mus musculus 12 days embryo embryo... 44 0.006
AK003994_1(AK003994|pid:none) Mus musculus 18-day embryo whole b... 44 0.006
AE014297_4004(AE014297|pid:none) Drosophila melanogaster chromos... 44 0.006
D85463_1(D85463|pid:none) Mus musculus mRNA for apolipoprotein E... 44 0.006
AK039790_1(AK039790|pid:none) Mus musculus adult male spinal cor... 44 0.006
(Q924X6) RecName: Full=Low-density lipoprotein receptor-related ... 44 0.006
BC071037_1(BC071037|pid:none) Xenopus laevis hypothetical protei... 44 0.006
DQ004683_1(DQ004683|pid:none) Xenopus laevis granulin 2 mRNA, co... 44 0.006
CP000113_6294(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 44 0.006
(Q9JI71) RecName: Full=Delta-like protein 4; AltName: Full=Droso... 44 0.006
BC161973_1(BC161973|pid:none) Rattus norvegicus fibulin 1, mRNA ... 44 0.006
BC073022_1(BC073022|pid:none) Xenopus laevis hypothetical protei... 44 0.006
Z70038_10(Z70038|pid:none) Caenorhabditis elegans Cosmid ZK1067,... 44 0.006
BC051968_1(BC051968|pid:none) Mus musculus NEL-like 2 (chicken),... 44 0.006
AE013599_3495(AE013599|pid:none) Drosophila melanogaster chromos... 44 0.006
(Q9AVB0) RecName: Full=Lectin-B; AltName: Full=PL-B; Flags: Prec... 44 0.006
BT001632_1(BT001632|pid:none) Drosophila melanogaster RE38584 fu... 44 0.006
(Q9BQ66) RecName: Full=Keratin-associated protein 4-12; AltName:... 44 0.007
(Q9UHX3) RecName: Full=EGF-like module-containing mucin-like hor... 44 0.007
T16408(T16408)hypothetical protein F48E3.9 - Caenorhabditis eleg... 44 0.007
AK222891_1(AK222891|pid:none) Homo sapiens mRNA for egf-like mod... 44 0.007
U17981_1(U17981|pid:none) Giardia lamblia variant-specific surfa... 44 0.007
T20406(T20406)hypothetical protein E01G6.1 - Caenorhabditis eleg... 44 0.007
AB218869_1(AB218869|pid:none) Rhyparobia maderae LpR mRNA for Li... 44 0.007
AL833232_1(AL833232|pid:none) Homo sapiens mRNA; cDNA DKFZp762L1... 44 0.007
AL590997_35(AL590997|pid:none) Mouse DNA sequence from clone RP2... 44 0.007
AF247637_1(AF247637|pid:none) Mus musculus LDLR dan mRNA, comple... 44 0.007
AF179416_1(AF179416|pid:none) Dendroides canadensis antifreeze p... 44 0.007
AK298700_1(AK298700|pid:none) Homo sapiens cDNA FLJ56997 complet... 44 0.007
AK079449_1(AK079449|pid:none) Mus musculus adult female vagina c... 44 0.010
S70664(S70664) lectin heavy chain, N-acetylgalactosamine-specifi... 44 0.010
(Q9R159) RecName: Full=Disintegrin and metalloproteinase domain-... 44 0.010
BC093485_1(BC093485|pid:none) Mus musculus corin, mRNA (cDNA clo... 44 0.010
AJ879619_2(AJ879619|pid:none) Solea senegalensis mRNA for very l... 44 0.010
AJ879619_1(AJ879619|pid:none) Solea senegalensis mRNA for very l... 44 0.010
(Q86XX4) RecName: Full=Extracellular matrix protein FRAS1; Flags... 44 0.010
BT045135_1(BT045135|pid:none) Salmo salar clone ssal-rgf-513-057... 44 0.010
BC104355_1(BC104355|pid:none) Mus musculus keratin associated pr... 44 0.010
AX647605_1(AX647605|pid:none) Sequence 1797 from Patent EP1270724. 44 0.010
AF353166_1(AF353166|pid:none) Toxoplasma gondii microneme protei... 44 0.010
AF463419_1(AF463419|pid:none) Naegleria gruberi basal body prote... 44 0.010
BT022830_1(BT022830|pid:none) Drosophila melanogaster IP13337 fu... 44 0.010
AE014134_2533(AE014134|pid:none) Drosophila melanogaster chromos... 44 0.010
AL591417_4(AL591417|pid:none) Mouse DNA sequence from clone RP23... 44 0.010
AB073427_1(AB073427|pid:none) Ciona savignyi mRNA for Delta, com... 44 0.010
BC025488_1(BC025488|pid:none) Mus musculus zinc finger, NFX1-typ... 44 0.010
BX571800_1(BX571800|pid:none) Zebrafish DNA sequence from clone ... 44 0.010
(Q62220) RecName: Full=Keratin-associated protein 5-4; AltName: ... 44 0.010
AY466854_1(AY466854|pid:none) Macaca mulatta low density lipopro... 43 0.012
(Q8VI56) RecName: Full=Low-density lipoprotein receptor-related ... 43 0.012

>(Q54C32) RecName: Full=Protein psiQ; Flags: Precursor;
Length = 985

Score = 223 bits (567), Expect = 9e-57
Identities = 118/320 (36%), Positives = 163/320 (50%), Gaps = 27/320 (8%)
Frame = +1

Query: 1 CITTDFCDPQICXGDPLNLSCIKNMSMCDDGNYCTTDICSGNGVCSHSSPDPLCRSCKST 180
CITTD C PQ C +C+ + CDD +YCTTD C +G+C H +P P C +C T
Sbjct: 341 CITTDLCFPQKCDSKG---NCVSSNKNCDDRDYCTTDTCQ-DGICIH-TPIPKCVNCAGT 395

Query: 181 NCTTTDLCQLQICSADGSGCET-----DQKGL----------------CDDKDPCTTDLC 297
C TT+ C ++C+ DG C T D K CDD D CT D C
Sbjct: 396 GCITTNDCNPKVCAPDGKSCLTEVLCNDNKTCTKDFCFAGHCLFIPIDCDDVDDCTVDTC 455

Query: 298 DKGV-CTHPKITDCMACNETFACITTVFCEYQICSSDKTHCIQTERNCDDQNECSTDFC- 471
D+ + C H + +C+AC ACITT C ++C+ + T C + + CDD N CS D C
Sbjct: 456 DETLGCVHTPLDNCIACT-GLACITTDLCNQKLCTDNGTKCTEVPKVCDDGNACSNDRCI 514

Query: 472 -QNDQCSHYFPKDCFLCGNQTCHDYDICYPAYCDI-STSTCANTTLTCDDKDPCTKDICF 645
N C+H ++C CG C D+C P C ++TC + TC+D PCT + C
Sbjct: 515 SPNGTCAHEILQNCTDCGTFNCITLDLCSPLSCPTDGSTTCVSIPKTCNDNKPCTLNQCH 574

Query: 646 SGTG-CGFVTIDRCTKCNET-VACIEKDLCKSLQCPADGSDECISSDKNCDDGNPCTYSE 819
S G C V I+ C KCN+T C+ D C ++C +G D CI +++ C+D N CT
Sbjct: 575 SPDGICTAVPIENCVKCNQTNRGCLTVDFCNPVECSENG-DSCIITNRTCNDYNYCTTDS 633

Query: 820 CDPETGSCIDSFIEGCSLCS 879
C G C + I+ C C+
Sbjct: 634 C--INGQCYNEIIQNCENCT 651

Score = 185 bits (469), Expect = 2e-45
Identities = 108/324 (33%), Positives = 139/324 (42%), Gaps = 47/324 (14%)
Frame = +1

Query: 52 NLSCIKNMSMCDDGNYCTTDICSGNGVCSHS-----------------------SPDPLC 162
N C+K+ C N C C N CS+S SP C
Sbjct: 274 NNVCVKSAPSCPSINPCEAGTCIPNFGCSYSEITCNRTNCENSFCNKDTNTCERSPIANC 333

Query: 163 RSCKSTNCTTTDLCQLQICSADGSGCETDQKGLCDDKDPCTTDLCDKGVCTHPKITDCMA 342
SC + C TTDLC Q C + G+ C + K CDD+D CTTD C G+C H I C+
Sbjct: 334 VSCSNGPCITTDLCFPQKCDSKGN-CVSSNKN-CDDRDYCTTDTCQDGICIHTPIPKCVN 391

Query: 343 CNETFACITTVFCEYQICSSD-------------KT---------HCIQTERNCDDQNEC 456
C T CITT C ++C+ D KT HC+ +CDD ++C
Sbjct: 392 CAGT-GCITTNDCNPKVCAPDGKSCLTEVLCNDNKTCTKDFCFAGHCLFIPIDCDDVDDC 450

Query: 457 STDFCQNDQ-CSHYFPKDCFLCGNQTCHDYDICYPAYCDISTSTCANTTLTCDDKDPCTK 633
+ D C C H +C C C D+C C + + C CDD + C+
Sbjct: 451 TVDTCDETLGCVHTPLDNCIACTGLACITTDLCNQKLCTDNGTKCTEVPKVCDDGNACSN 510

Query: 634 DICFSGTG-CGFVTIDRCTKCNETVACIEKDLCKSLQCPADGSDECISSDKNCDDGNPCT 810
D C S G C + CT C T CI DLC L CP DGS C+S K C+D PCT
Sbjct: 511 DRCISPNGTCAHEILQNCTDCG-TFNCITLDLCSPLSCPTDGSTTCVSIPKTCNDNKPCT 569

Query: 811 YSECDPETGSCIDSFIEGCSLCSK 882
++C G C IE C C++
Sbjct: 570 LNQCHSPDGICTAVPIENCVKCNQ 593

Score = 179 bits (453), Expect = 1e-43
Identities = 100/296 (33%), Positives = 132/296 (44%), Gaps = 6/296 (2%)
Frame = +1

Query: 1 CITTDFCDPQICXGDPLNLSCIKNMSMCDDGNYCTTDIC-SGNGVCSHSSPDPLCRSCKS 177
CIT D C P C D + +C+ C+D CT + C S +G+C+ + P C C
Sbjct: 536 CITLDLCSPLSCPTDG-STTCVSIPKTCNDNKPCTLNQCHSPDGICT-AVPIENCVKCNQ 593

Query: 178 TN--CTTTDLCQLQICSADGSGCETDQKGLCDDKDPCTTDLCDKGVCTHPKITDCMACNE 351
TN C T D C CS +G C + C+D + CTTD C G C + I +C C
Sbjct: 594 TNRGCLTVDFCNPVECSENGDSCIITNR-TCNDYNYCTTDSCINGQCYNEIIQNCENCTN 652

Query: 352 TFACITTVFCEYQICSSDKTHCIQTERNCDDQNECSTDFC--QNDQCSHYFPKDCFLCGN 525
C TT FC QICS C +C+D C+T+ C N C+H K+C CG
Sbjct: 653 GIGCTTTDFCFQQICSDSGDTCKTVPLDCNDGLSCTTETCLGPNGTCTHTIIKNCIECGI 712

Query: 526 QTCHDYDICYPAYCDISTSTCAN-TTLTCDDKDPCTKDICFSGTGCGFVTIDRCTKCNET 702
+ C ++C P C S N T TCDD D CT D+C + GC T C C
Sbjct: 713 EPCITENLCLPVVCGPDGSCLYNYTESTCDDNDACTSDVC-TEYGCEHYTYTGCMNCTNG 771

Query: 703 VACIEKDLCKSLQCPADGSDECISSDKNCDDGNPCTYSECDPETGSCIDSFIEGCS 870
D C C G +C + CDD +PCT C +G C + C+
Sbjct: 772 GCFTTPDTCNHYGCNFTGDGKCFFTHLECDDNDPCTKDHC-LYSGDCYYEKLTNCT 826

Score = 172 bits (435), Expect = 2e-41
Identities = 99/319 (31%), Positives = 143/319 (44%), Gaps = 27/319 (8%)
Frame = +1

Query: 1 CITTDFCDPQICXGDPL----------NLSCIKNMSM----------CDDGNYCTTDICS 120
CITT+ C+P++C D N +C K+ CDD + CT D C
Sbjct: 397 CITTNDCNPKVCAPDGKSCLTEVLCNDNKTCTKDFCFAGHCLFIPIDCDDVDDCTVDTCD 456

Query: 121 GNGVCSHSSPDPLCRSCKSTNCTTTDLCQLQICSADGSGCETDQKGLCDDKDPCTTDLC- 297
C H+ D C +C C TTDLC ++C+ +G+ C T+ +CDD + C+ D C
Sbjct: 457 ETLGCVHTPLDN-CIACTGLACITTDLCNQKLCTDNGTKC-TEVPKVCDDGNACSNDRCI 514

Query: 298 -DKGVCTHPKITDCMACNETFACITTVFCEYQICSSD-KTHCIQTERNCDDQNECSTDFC 471
G C H + +C C TF CIT C C +D T C+ + C+D C+ + C
Sbjct: 515 SPNGTCAHEILQNCTDCG-TFNCITLDLCSPLSCPTDGSTTCVSIPKTCNDNKPCTLNQC 573

Query: 472 QNDQ--CSHYFPKDCFLCG--NQTCHDYDICYPAYCDISTSTCANTTLTCDDKDPCTKDI 639
+ C+ ++C C N+ C D C P C + +C T TC+D + CT D
Sbjct: 574 HSPDGICTAVPIENCVKCNQTNRGCLTVDFCNPVECSENGDSCIITNRTCNDYNYCTTDS 633

Query: 640 CFSGTGCGFVTIDRCTKCNETVACIEKDLCKSLQCPADGSDECISSDKNCDDGNPCTYSE 819
C +G C I C C + C D C C +D D C + +C+DG CT
Sbjct: 634 CINGQ-CYNEIIQNCENCTNGIGCTTTDFCFQQIC-SDSGDTCKTVPLDCNDGLSCTTET 691

Query: 820 CDPETGSCIDSFIEGCSLC 876
C G+C + I+ C C
Sbjct: 692 CLGPNGTCTHTIIKNCIEC 710

Score = 68.9 bits (167), Expect = 2e-10
Identities = 53/195 (27%), Positives = 76/195 (38%), Gaps = 24/195 (12%)
Frame = +1

Query: 376 FCEYQICSSDKTHCIQTERNCDDQNECSTDFCQNDQCSHYFPKDCFLCGNQTCHDYDICY 555
+CE S + E C +EC CQ D S +C N ++ C
Sbjct: 215 YCERHTTESHISIETSIELTCPGYDECGV--CQGDGSSCCTKSNC----NDNPNNKLNCI 268

Query: 556 PAYCDISTSTCANTTLTCDDKDPCTKDICFSGTGCGF--VTIDR---------------- 681
A C S + C + +C +PC C GC + +T +R
Sbjct: 269 TAQC--SNNVCVKSAPSCPSINPCEAGTCIPNFGCSYSEITCNRTNCENSFCNKDTNTCE 326

Query: 682 ------CTKCNETVACIEKDLCKSLQCPADGSDECISSDKNCDDGNPCTYSECDPETGSC 843
C C+ CI DLC +C + G+ C+SS+KNCDD + CT C + G C
Sbjct: 327 RSPIANCVSCSNG-PCITTDLCFPQKCDSKGN--CVSSNKNCDDRDYCTTDTC--QDGIC 381

Query: 844 IDSFIEGCSLCSKPG 888
I + I C C+ G
Sbjct: 382 IHTPIPKCVNCAGTG 396

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,578,376,250
Number of extensions: 35956706
Number of successful extensions: 111408
Number of sequences better than 10.0: 1400
Number of HSP's gapped: 105998
Number of HSP's successfully gapped: 2577
Length of query: 297
Length of database: 1,051,180,864
Length adjustment: 128
Effective length of query: 169
Effective length of database: 636,901,312
Effective search space: 107636321728
Effective search space used: 107636321728
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.44 alm: 0.44 top: 0.53 tms: 0.00 mit: 0.24 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: cytoplasmic
36.0 %: nuclear
12.0 %: cytoskeletal
8.0 %: mitochondrial

>> prediction for Contig-U13205-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 1
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0