Contig-U02102-1
Contig ID Contig-U02102-1
Contig update 2001. 8.29
Contig sequence
>Contig-U02102-1 (Contig-U02102-1Q) /CSM_Contig/Contig-U02102-1Q.Seq.d
AAAAACGTTTTTACGCAAATAATTTTGAAATAAAATTTTGGTATAATGTT
TAGTTATTTTAGAAAAAGTCAACAAAAAGTTGAAGAAAATCAAAATGGTG
GTGGTGGTGATGGTAGAGGTAGTGGTATAAAAGTTGAGTTACAAACAAAT
ATTAATAGTAGAGATTTAAAGAATGAACATTCTGATCCAAAATTTAAATT
CTCTCCATTGAGATCAACAGATGTTCATCTTGAAGATTATGATAATGAAA
AATATAAATTGAAATTCATTCAAATCGTAACTAGACATGGCAGAAGAACA
CCAGAATCAAATAGAACACCATTAACAATGTGGATGTGTAATTCAATGGA
TCATTTAATCTCAAATAAAGATTCACCAAGACCAAATTGTAATCCAGGTC
AATTAACTGTACTTGGTATAGTTGATCAAATTAACGTTGGTAAAATTTAT
AGAAAATTATTTATTGATCATCTTGGTTTCCTTGATTCTCAATATAACAA
AGATCAAATCTTTAT----------GAAGAATCAAGTTTTAGAGCTAGAG
GATTTAGATCATATGCAGGATTAGTGAATTCATTTGATTGTTTTAGAAAT
AATGGTTTACCAATTCCAAAAGGATTAACAAAAGATATTATTCAAAGAAT
GTATGAAGAGAGTGCAAAAGAATTTAAGAGTGCAAGATATTTCCCAGAGA
TGTCGATATTGGGTATTGGTAGATTCGTTGAATGATTTAAATAAAGAATT
AAAATTGAAAGCACGTAATGATCCATCAGTAAAAGATTTAAAACTTTCAT
TATATTCAGGTCACGATACTACATTGGCAGCATTATTAGTGGGTTACGAT
ATGTATGAAGATAAAATTCATCCAGTGACTTCATCAACTTTAGAATTCCT
TTTAATGCAAGATAAAGATTACAAAGAACCAGAAGTTGTGAAAATCACAA
AATCAATCGAAAAGGAATTAATCAATCATCAATATGTTAAAGTTATCTAT
AATCATAAACCAATTCATATTGGACCATGTAAAGATAAAGAGGTAGATGG
TATGTGTCCACTCTCTGAATTCCTTAAAATCTCACAATCAATCATTCCAA
CAAACTATGATGAACAATCAAAACTTACTCAACTTGATAAAAAAAGATAT
TTATCATTAATTGAAGATTAAAAATAATATGTTTCAATAAATTATCATTA
TTTTT

Gap gap included
Contig length 1195
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 2439840
End point 2438707
Strand (PLUS/MINUS) MINUS
Number of clones 2
Number of EST 3
Link to clone list U02102
List of clone(s)

est1=VFD125F,1,516
est2=VSK226E,517,1178
est3=VFD125Z,539,1197
Translated Amino Acid sequence
knvftqiilk*NFGIMFSYFRKSQQKVEENQNGGGGDGRGSGIKVELQTNINSRDLKNEH
SDPKFKFSPLRSTDVHLEDYDNEKYKLKFIQIVTRHGRRTPESNRTPLTMWMCNSMDHLI
SNKDSPRPNCNPGQLTVLGIVDQINVGKIYRKLFIDHLGFLDSQYNKDQIF---

---EESSFRARGFRSYAGLVNSFDCFRNNGLPIPKGLTKDIIQRMYEESAKEFKSARYFP
EMSILGIGRFVE*fk*rikiest**siskrfktfiifrsryyigsiisglryv*r*nsss
dfinfripfnar*rlqrtrscenhkinrkginqssic*syl*s*tnsywtm*r*rgrwyv
stl*ip*nltinhsnkl**tiktyst**kkifiin*rlkiicfnklslf


Translated Amino Acid sequence (All Frames)
Frame A:
knvftqiilk*NFGIMFSYFRKSQQKVEENQNGGGGDGRGSGIKVELQTNINSRDLKNEH
SDPKFKFSPLRSTDVHLEDYDNEKYKLKFIQIVTRHGRRTPESNRTPLTMWMCNSMDHLI
SNKDSPRPNCNPGQLTVLGIVDQINVGKIYRKLFIDHLGFLDSQYNKDQIF---

---EESSFRARGFRSYAGLVNSFDCFRNNGLPIPKGLTKDIIQRMYEESAKEFKSARYFP
EMSILGIGRFVE*fk*rikiest**siskrfktfiifrsryyigsiisglryv*r*nsss
dfinfripfnar*rlqrtrscenhkinrkginqssic*syl*s*tnsywtm*r*rgrwyv
stl*ip*nltinhsnkl**tiktyst**kkifiin*rlkiicfnklslf

Frame B:
ktflrk*f*nkilv*clvilekvnkklkkikmvvvvmvevvv*klsykqilivei*rmni
liqnlnslh*dqqmfilkimimknin*nsfks*ldmaeehqnqiehh*qcgcviqwii*s
qikihqdqiviqvn*lylv*likltlvkfienylliilvslilnitkiksl---

---knqvleledldhmqd**ihlivleimvyqfqkd*qkilfkecmkrvqknlrvqdisq
rcrywvlvdslndlnkelklkarndpsvkdlklslysghdttlaallvgydmyedkihpv
tsstlefllmqdkdykepevvkitksiekelinhqyvkviynhkpihigpckdkevdgmc
plseflkisqsiiptnydeqskltqldkkrylslied*k*yvsinyhyf

Frame C:
krfyannfeikfwynv*lf*kkstks*rkskwwww*w*r*wyks*vtnky***rfke*tf
*ski*ilsieinrcss*rl***ki*ieihsnrn*twqkntrik*ntinnvdv*fngsfnl
k*rftktkl*srsinctwys*sn*rw*nl*kiiy*sswfp*fsi*qrsnly---

---rikf*s*ri*iicrisefi*lf*k*wftnskrinkryysknv*reckri*eckifpr
dvdigyw*ir*mi*ikn*n*khvmihq*ki*nfhyiqvtilhwqhy*wvticmkikfiq*
lhql*nsf*ckikitknqkl*ksqnqskrn*siinmlklsiiinqfildhvkikr*mvcv
hslnslkshnqsfqqtmmnnqnllnlikkdiyh*lkiknnmfq*iiiif

own update 2004. 6. 9
Homology vs CSM-cDNA
Query= Contig-U02102-1 (Contig-U02102-1Q)
/CSM_Contig/Contig-U02102-1Q.Seq.d
(1205 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U02102-1 (Contig-U02102-1Q) /CSM_Contig/Conti... 2288 0.0
Contig-U11813-1 (Contig-U11813-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U13938-1 (Contig-U13938-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U12805-1 (Contig-U12805-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U12001-1 (Contig-U12001-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U11698-1 (Contig-U11698-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U11391-1 (Contig-U11391-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U11340-1 (Contig-U11340-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U10742-1 (Contig-U10742-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U06588-1 (Contig-U06588-1Q) /CSM_Contig/Conti... 40 0.005

>Contig-U02102-1 (Contig-U02102-1Q) /CSM_Contig/Contig-U02102-1Q.Seq.d
Length = 1205

Score = 2288 bits (1154), Expect = 0.0
Identities = 1198/1205 (99%)
Strand = Plus / Plus


Query: 1 aaaaacgtttttacgcaaataattttgaaataaaattttggtataatgtttagttatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaaacgtttttacgcaaataattttgaaataaaattttggtataatgtttagttatttt 60


Query: 61 agaaaaagtcaacaaaaagttgaagaaaatcaaaatggtggtggtggtgatggtagaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaaaaagtcaacaaaaagttgaagaaaatcaaaatggtggtggtggtgatggtagaggt 120


Query: 121 agtggtataaaagttgagttacaaacaaatattaatagtagagatttaaagaatgaacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtggtataaaagttgagttacaaacaaatattaatagtagagatttaaagaatgaacat 180


Query: 181 tctgatccaaaatttaaattctctccattgagatcaacagatgttcatcttgaagattat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctgatccaaaatttaaattctctccattgagatcaacagatgttcatcttgaagattat 240


Query: 241 gataatgaaaaatataaattgaaattcattcaaatcgtaactagacatggcagaagaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gataatgaaaaatataaattgaaattcattcaaatcgtaactagacatggcagaagaaca 300


Query: 301 ccagaatcaaatagaacaccattaacaatgtggatgtgtaattcaatggatcatttaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccagaatcaaatagaacaccattaacaatgtggatgtgtaattcaatggatcatttaatc 360


Query: 361 tcaaataaagattcaccaagaccaaattgtaatccaggtcaattaactgtacttggtata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcaaataaagattcaccaagaccaaattgtaatccaggtcaattaactgtacttggtata 420


Query: 421 gttgatcaaattaacgttggtaaaatttatagaaaattatttattgatcatcttggtttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttgatcaaattaacgttggtaaaatttatagaaaattatttattgatcatcttggtttc 480


Query: 481 cttgattctcaatataacaaagatcaaatctttatnnnnnnnnnngaagaatcaagtttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cttgattctcaatataacaaagatcaaatctttatnnnnnnnnnngaagaatcaagtttt 540


Query: 541 agagctagaggatttagatcatatgcaggattagtgaattcatttgattgttttagaaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agagctagaggatttagatcatatgcaggattagtgaattcatttgattgttttagaaat 600


Query: 601 aatggtttaccaattccaaaaggattaacaaaagatattattcaaagaatgtatgaagag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aatggtttaccaattccaaaaggattaacaaaagatattattcaaagaatgtatgaagag 660


Query: 661 agtgcaaaagaatttaagagtgcaagatatttcccagagatgtcgatattgggtattggt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agtgcaaaagaatttaagagtgcaagatatttcccagagatgtcgatattgggtattggt 720


Query: 721 agattcgttgaatgatttaaataaagaattaaaattgaaagcacgtaatgatccatcagt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 agattcgttgaatgatttaaataaagaattaaaattgaaagcacgtaatgatccatcagt 780


Query: 781 aaaagatttaaaactttcattatattcaggtcacgatactacattggcagcattattagt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aaaagatttaaaactttcattatattcaggtcacgatactacattggcagcattattagt 840


Query: 841 gggttacgatatgtatgaagataaaattcatccagtgacttcatcaactttagaattcct 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gggttacgatatgtatgaagataaaattcatccagtgacttcatcaactttagaattcct 900


Query: 901 tttaatgcaagataaagattacaaagaaccagaagttgtgaaaatcacaaaatcaatcga 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 tttaatgcaagataaagattacaaagaaccagaagttgtgaaaatcacaaaatcaatcga 960


Query: 961 aaaggaattaatcaatcatcaatatgttaaagttatctataatcataaaccaattcatat 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 aaaggaattaatcaatcatcaatatgttaaagttatctataatcataaaccaattcatat 1020


Query: 1021 tggaccatgtaaagataaagaggtagatggtatgtgtccactctctgaattccttaaaat 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tggaccatgtaaagataaagaggtagatggtatgtgtccactctctgaattccttaaaat 1080


Query: 1081 ctcacaatcaatcattccaacaaactatgatgaacaatcaaaacttactcaacttgatnn 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ctcacaatcaatcattccaacaaactatgatgaacaatcaaaacttactcaacttgataa 1140


Query: 1141 nnnnngatatttatcattaattgaagattaaaaataatatgtttcaataaattatcatta 1200
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aaaaagatatttatcattaattgaagattaaaaataatatgtttcaataaattatcatta 1200


Query: 1201 ttttt 1205
|||||
Sbjct: 1201 ttttt 1205


>Contig-U11813-1 (Contig-U11813-1Q) /CSM_Contig/Contig-U11813-1Q.Seq.d
Length = 1138

Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Minus


Query: 95 atggtggtggtggtgatggta 115
|||||||||||||||||||||
Sbjct: 781 atggtggtggtggtgatggta 761


>Contig-U13938-1 (Contig-U13938-1Q) /CSM_Contig/Contig-U13938-1Q.Seq.d
Length = 1111

Score = 40.1 bits (20), Expect = 0.005
Identities = 23/24 (95%)
Strand = Plus / Plus


Query: 93 aaatggtggtggtggtgatggtag 116
||||||||||||||||| ||||||
Sbjct: 540 aaatggtggtggtggtggtggtag 563


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 24,951
Number of Sequences: 6905
Number of extensions: 24951
Number of successful extensions: 3370
Number of sequences better than 10.0: 428
length of query: 1205
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1189
effective length of database: 5,564,391
effective search space: 6616060899
effective search space used: 6616060899
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 5.14
Homology vs DNA
Query= Contig-U02102-1 (Contig-U02102-1Q) /CSM_Contig/Contig-U02102-1Q.Seq.d
(1205 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ430427) Dictyostelium discoideum cDNA clone:ddv7a07, 3' e... 801 0.0 4
(AU270839) Dictyostelium discoideum vegetative cDNA clone:VS... 993 0.0 2
(BJ412174) Dictyostelium discoideum cDNA clone:ddv7a07, 5' e... 1021 0.0 1
(AU270838) Dictyostelium discoideum vegetative cDNA clone:VS... 513 0.0 2
(EL864224) CBXT18960.g1 NICHD_XGC_trop_25 Xenopus (Silurana)... 145 2e-53 5
(EL864223) CBXT18960.b1 NICHD_XGC_trop_25 Xenopus (Silurana)... 68 2e-22 4
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 34 2e-04 16
(CR361560) Zebrafish DNA sequence from clone CH211-122G18 in... 44 9e-04 5
(AL672030) Mouse DNA sequence from clone RP23-199E12 on chro... 56 0.003 1
(AC118185) Rattus norvegicus clone CH230-168G23, *** SEQUENC... 56 0.003 1
(AC105529) Rattus norvegicus clone CH230-218F4, WORKING DRAF... 56 0.003 1
(AC184628) Strongylocentrotus purpuratus clone R3-1032B22, W... 56 0.003 1
(AC179811) Strongylocentrotus purpuratus clone R3-1013K2, WO... 56 0.003 1
(CP000361) Arcobacter butzleri RM4018, complete genome. 40 0.004 20
(AP007800) Lotus japonicus genomic DNA, chromosome 2, clone:... 38 0.004 9
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 38 0.005 18
(AC153498) Mus musculus 10 BAC RP23-353P23 (Roswell Park Can... 42 0.012 6
(AC157512) Mus musculus BAC clone RP24-399L6 from chromosome... 54 0.013 1
(AC122370) Mus musculus BAC clone RP23-459B8 from chromosome... 54 0.013 1
(AC022308) Homo sapiens chromosome 15 clone RP11-34L4, compl... 54 0.013 1
(AC008738) Homo sapiens chromosome 19 clone CTD-2540B15, com... 54 0.013 1
(AC212080) Pongo abelii chromosome 5 clone CH276-187B22, WOR... 54 0.013 1
(AC164667) Bos taurus clone CH240-151I10, *** SEQUENCING IN ... 54 0.013 1
(ET061261) MUGQ_CH252P357J11Sp6_CP670_040 CHORI-252 Vervet M... 54 0.013 1
(AP004467) Lotus japonicus genomic DNA, chromosome 2, clone:... 38 0.018 8
(AL445933) Human DNA sequence from clone RP11-486B10 on chro... 50 0.033 2
(AC189409) Brassica rapa subsp. pekinensis clone KBrB059L17,... 40 0.050 7
(AC161363) Mus musculus BAC clone RP24-554L15 from chromosom... 52 0.051 1
(EA333164) Sequence 5656 from patent US 7306913. 52 0.051 1
(AC209423) Gallus gallus chromosome UNKNOWN clone CH261-161A... 52 0.051 1
(AC187331) Canis lupus familiaris chromosome 3 clone 14_J_6 ... 52 0.051 1
(AC175908) Strongylocentrotus purpuratus clone R3-13B3, WORK... 52 0.051 1
(CN222148) WLA039B07.ab1 WLbrain Gallus gallus cDNA 5', mRNA... 52 0.051 1
(BM490383) pgp2n.pk003.e12 Normalized Chicken Pituitary/Hypo... 52 0.051 1
(FB571381) Sequence 248 from Patent EP1865317. 34 0.064 10
(FB571325) Sequence 192 from Patent EP1865317. 34 0.064 10
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 34 0.083 19
(AC232708) Solanum tuberosum chromosome 6 clone RHPOTKEY067N... 38 0.088 10
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 36 0.12 15
(AC181309) Strongylocentrotus purpuratus clone R3-4017H24, W... 38 0.12 2
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 38 0.14 19
(AM624489) Entamoeba dispar GSS, clone dispar10g06.p1k. 34 0.14 4
(AC120914) Rattus norvegicus clone CH230-241D6, WORKING DRAF... 48 0.14 4
(AC118346) Oryza sativa (japonica cultivar-group) chromosome... 38 0.14 7
(AE017332) Mycoplasma hyopneumoniae 232, complete genome. 34 0.15 19
(AL805908) Mouse DNA sequence from clone RP23-461P20 on chro... 50 0.15 3
(AE014821) Plasmodium falciparum 3D7 chromosome 14 section 6... 36 0.18 12
(AC154389) Mus musculus BAC clone RP23-2H9 from chromosome 1... 38 0.18 6
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen... 34 0.18 10
(AM632270) Entamoeba dispar GSS, clone dispar86a11.q1k. 34 0.19 4
(AM285304) Spiroplasma citri GII3-3X chromosome, contig Cont... 32 0.20 12
(AC188607) Mus musculus BAC clone RP23-143D11 from chromosom... 50 0.20 1
(AC148989) Mus musculus BAC clone RP24-445D7 from chromosome... 50 0.20 1
(AC117657) Mus musculus chromosome 15, clone RP23-299O23, co... 50 0.20 1
(AC111378) Rattus norvegicus 4 BAC CH230-126E21 (Children's ... 50 0.20 1
(AC087251) Rattus norvegicus strain Brown Norway clone RP31-... 50 0.20 1
(AP009827) Lotus japonicus genomic DNA, clone: LjT02G13, TM0... 50 0.20 1
(CQ870468) Sequence 889 from Patent WO2004074320. 50 0.20 1
(CQ869981) Sequence 402 from Patent WO2004074320. 50 0.20 1
(AP004147) Homo sapiens genomic DNA, chromosome 11 clone:RP1... 50 0.20 1
(AP001855) Homo sapiens genomic DNA, chromosome 11q, clone:R... 50 0.20 1
(AC093323) Homo sapiens BAC clone RP11-539L10 from 4, comple... 50 0.20 1
(AC129682) Rattus norvegicus clone CH230-207C13, *** SEQUENC... 50 0.20 1
(AC128633) Rattus norvegicus clone CH230-239P1, *** SEQUENCI... 50 0.20 1
(AC128349) Rattus norvegicus clone CH230-51D16, *** SEQUENCI... 50 0.20 1
(AC120299) Rattus norvegicus clone CH230-404L20, WORKING DRA... 50 0.20 1
(AC115493) Rattus norvegicus clone CH230-191O3, WORKING DRAF... 50 0.20 1
(AC110394) Rattus norvegicus clone CH230-303E14, *** SEQUENC... 50 0.20 1
(AC096504) Rattus norvegicus clone CH230-167O14, WORKING DRA... 50 0.20 1
(CU914258) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.20 1
(CU062516) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.20 1
(AC199645) Pan troglodytes chromosome 4 clone CH251-334M12, ... 50 0.20 1
(AC179199) Strongylocentrotus purpuratus clone R3-4019H18, W... 50 0.20 1
(AC004480) Homo sapiens chromosome 4, *** SEQUENCING IN PROG... 50 0.20 1
(EK364378) 1095469390904 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.20 1
(CT848113) Oryza sativa Indica Group EST sequence:CONTIG6104. 50 0.20 1
(BJ000985) Oryzias latipes cDNA clone:MF01SSA023E11 : 5' end... 50 0.20 1
(ED299282) AUAC-aav67f03.g1 Ascaris suum whole genome shotgu... 38 0.22 2
(ED395430) AUAC-aaf16g11.b1 Ascaris suum whole genome shotgu... 38 0.23 2
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 34 0.24 14
(AC179606) Strongylocentrotus purpuratus clone R3-1028P05, W... 48 0.24 5
(BV494976) S217P62255RC10.T0 Noemie Pan troglodytes troglody... 40 0.25 2
(CT033768) Medicago truncatula chromosome 5 clone mte1-72b19... 32 0.31 9
(AJ294725) Astasia longa complete chloroplast genome. 34 0.37 9
(AC095425) Rattus norvegicus clone CH230-7A9, *** SEQUENCING... 44 0.38 4
(AE001437) Clostridium acetobutylicum ATCC 824, complete gen... 34 0.40 20
(CP000721) Clostridium beijerinckii NCIMB 8052, complete gen... 40 0.41 21
(CR932968) Medicago truncatula chromosome 5 clone mth2-8e17,... 32 0.43 9
(AL844509) Plasmodium falciparum chromosome 13. 34 0.44 16
(CT485663) Leptosphaeria maculans : genomic region surroundi... 36 0.46 2
(CT485649) Leptosphaeria maculans : genomic region surroundi... 36 0.46 2
(AL160156) Human DNA sequence *** SEQUENCING CANCELLED *** f... 36 0.51 9
(CP001158) Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisu... 34 0.57 14
(AP008207) Oryza sativa (japonica cultivar-group) genomic DN... 46 0.57 18
(AE017263) Mesoplasma florum L1 complete genome. 32 0.59 20
(ED688713) GM_WBb0024P06.f GM_WBb Glycine max genomic clone ... 38 0.60 2
(AC180853) Strongylocentrotus purpuratus clone R3-3068K11, W... 40 0.61 4
(AP004085) Oryza sativa Japonica Group genomic DNA, chromoso... 40 0.67 5
(AC094047) Rattus norvegicus chromosome 18 clone CH230-191I1... 46 0.77 2
(CT573150) Mouse DNA sequence from clone RP24-221A14 on chro... 48 0.79 1
(CT009711) Mouse DNA sequence from clone RP23-128L22 on chro... 48 0.79 1
(BX883044) Rattus norvegicus chromosome 20, major histocompa... 48 0.79 1
(AL840635) Mouse DNA sequence from clone RP23-418D21 on chro... 48 0.79 1
(AL732633) Mouse DNA sequence from clone RP23-320E20 on chro... 48 0.79 1
(AL691444) Mouse DNA sequence from clone RP23-224E21 on chro... 48 0.79 1
(AL672236) Mouse DNA sequence from clone RP23-206L21 on chro... 48 0.79 1
(AL669824) Mouse DNA sequence from clone RP23-396G1 on chrom... 48 0.79 1
(AL663083) Mouse DNA sequence from clone RP23-280G3 on chrom... 48 0.79 1
(AL645903) Mouse DNA sequence from clone RP23-179M4 on chrom... 48 0.79 1
(AL604043) Mouse DNA sequence from clone RP23-391H8 on chrom... 48 0.79 1
(AC154232) Mus musculus BAC clone RP24-340J3 from chromosome... 48 0.79 1
(AC154204) Mus musculus BAC clone RP24-393D5 from chromosome... 48 0.79 1
(AC140337) Mus musculus BAC clone RP23-238H7 from 1, complet... 48 0.79 1
(AC140055) Mus musculus BAC clone RP23-52F4 from chromosome ... 48 0.79 1
(AC134453) Mus musculus BAC clone RP24-263P23 from chromosom... 48 0.79 1
(AC127331) Mus musculus BAC clone RP23-127A19 from 18, compl... 48 0.79 1
(AC118003) Mus musculus chromosome 5, clone RP23-146G20, com... 48 0.79 1
(AC117757) Mus musculus chromosome 1, clone RP24-420I4, comp... 48 0.79 1
(AC116815) Mus musculus chromosome 5, clone RP24-357H22, com... 48 0.79 1
(AC116419) Mus musculus chromosome 1, clone RP24-89C10, comp... 48 0.79 1
(AC116412) Mus musculus chromosome 5, clone RP24-82A20, comp... 48 0.79 1
(AC097959) Rattus norvegicus BAC CH230-114G10 (Children's H... 48 0.79 1
(BS000236) Pan troglodytes chromosome 22 clone:PTB-058L13, m... 48 0.79 1
(BS000235) Pan troglodytes chromosome 22 clone:PTB-013J17, m... 48 0.79 1
(BS000234) Pan troglodytes chromosome 22 clone:PTB-190I13, m... 48 0.79 1
(AC197589) Pongo abelii BAC clone CH276-353O4 from chromosom... 48 0.79 1
(AC188422) Pan troglodytes BAC clone CH251-352J10 from chrom... 48 0.79 1
(AC172624) Rhesus Macaque BAC CH250-494G19 (Children's Hosp... 48 0.79 1
(AC144479) Pan troglodytes BAC clone RP43-126P12 from chromo... 48 0.79 1
(FM992688) Candida dubliniensis CD36 chromosome 1, complete ... 48 0.79 1
(EU094835) Humulus lupulus clone ACC2-E14-4 microsatellite s... 48 0.79 1
(AM270200) Aspergillus niger contig An09c0110, complete genome. 48 0.79 1
(CS374589) Sequence 692 from Patent WO2006034879. 48 0.79 1
(CQ341185) Sequence 15279 from Patent WO0157275. 48 0.79 1
(CQ328471) Sequence 2565 from Patent WO0157275. 48 0.79 1
(CQ303869) Sequence 14974 from Patent WO0186003. 48 0.79 1
(CQ291368) Sequence 2473 from Patent WO0186003. 48 0.79 1
(CQ266896) Sequence 15157 from Patent WO0157277. 48 0.79 1
(CQ254334) Sequence 2595 from Patent WO0157277. 48 0.79 1
(CQ228754) Sequence 15593 from Patent WO0157273. 48 0.79 1
(CQ215756) Sequence 2595 from Patent WO0157273. 48 0.79 1
(CQ205355) Sequence 7632 from Patent WO0157271. 48 0.79 1
(CQ200252) Sequence 2529 from Patent WO0157271. 48 0.79 1
(CQ180991) Sequence 12387 from Patent WO0157274. 48 0.79 1
(CQ171117) Sequence 2513 from Patent WO0157274. 48 0.79 1
(CQ145546) Sequence 15568 from Patent WO0157276. 48 0.79 1
(CQ132545) Sequence 2567 from Patent WO0157276. 48 0.79 1
(CQ106891) Sequence 15750 from Patent WO0157272. 48 0.79 1
(CQ093768) Sequence 2627 from Patent WO0157272. 48 0.79 1
(CQ075914) Sequence 11714 from Patent WO0157278. 48 0.79 1
(CQ066726) Sequence 2526 from Patent WO0157278. 48 0.79 1
(CQ056637) Sequence 7457 from Patent WO0157270. 48 0.79 1
(CQ051669) Sequence 2489 from Patent WO0157270. 48 0.79 1
(AP005271) Homo sapiens genomic DNA, chromosome 18 clone:RP1... 48 0.79 1
(AL391153) Human chromosome 14 DNA sequence BAC C-2576L4 of ... 48 0.79 1
(AL354744) Human DNA sequence from clone RP11-635N21 on chro... 48 0.79 1
(AL163201) Homo sapiens chromosome 21 segment HS21C001. 48 0.79 1
(AL078472) Homo sapiens chromosome 21 BAC B11L7C8. 48 0.79 1
(AF254983) Homo sapiens chromosome 21 clone RP11-589M2 map p... 48 0.79 1
(AC104020) Homo sapiens chromosome 15, clone RP11-369K8, com... 48 0.79 1
(AC027343) Homo sapiens chromosome 5 clone CTD-2296D1, compl... 48 0.79 1
(AC007954) Homo sapiens chromosome 14 clone RP11-493G17 and ... 48 0.79 1
(AC007156) Homo sapiens chromosome 18, clone hRPK.419_J_16, ... 48 0.79 1
(AC000125) Human Cosmid g1572c037 from 7q31.3, complete sequ... 48 0.79 1
(AC161305) Papio anubis clone RP41-389I24, WORKING DRAFT SEQ... 48 0.79 1
(AC157579) Mus musculus chromosome 1 clone RP23-14E16 map 1,... 48 0.79 1
(AC141782) Apis mellifera clone CH224-59E10, WORKING DRAFT S... 48 0.79 1
(AC141208) Rattus norvegicus clone CH230-341N2, WORKING DRAF... 48 0.79 1
(AC140904) Homo sapiens chromosome 16 clone RP11-837J3, WORK... 48 0.79 1
(AC140836) Homo sapiens chromosome 5 clone RP11-958L22, WORK... 48 0.79 1
(AC136784) Homo sapiens chromosome 15 clone RP11-1368O16 map... 48 0.79 1
(AC136231) Rattus norvegicus clone CH230-2J20, *** SEQUENCIN... 48 0.79 1
(AC131505) Lytechinus variegatus clone Lv97A18, *** SEQUENCI... 48 0.79 1
(AC127046) Rattus norvegicus clone CH230-54G16, *** SEQUENCI... 48 0.79 1
(AC126532) Rattus norvegicus clone CH230-28K20, WORKING DRAF... 48 0.79 1
(AC122958) Rattus norvegicus clone CH230-59M12, *** SEQUENCI... 48 0.79 1
(AC122668) Rattus norvegicus clone CH230-159D2, WORKING DRAF... 48 0.79 1
(AC121209) Rattus norvegicus clone CH230-185M1, WORKING DRAF... 48 0.79 1
(AC119818) Mus musculus clone RP23-104A22, *** SEQUENCING IN... 48 0.79 1
(AC119294) Rattus norvegicus clone CH230-181N4, *** SEQUENCI... 48 0.79 1
(AC117846) Rattus norvegicus clone CH230-247A19, *** SEQUENC... 48 0.79 1
(AC117345) Rattus norvegicus clone CH230-40G3, *** SEQUENCIN... 48 0.79 1
(AC117160) Rattus norvegicus clone CH230-227G23, *** SEQUENC... 48 0.79 1
(AC116935) Papio anubis clone RP41-259O18, WORKING DRAFT SEQ... 48 0.79 1
(AC113811) Rattus norvegicus clone CH230-216D16, *** SEQUENC... 48 0.79 1
(AC113743) Rattus norvegicus clone CH230-108K21, WORKING DRA... 48 0.79 1
(AC113703) Rattus norvegicus clone CH230-99M13, WORKING DRAF... 48 0.79 1
(AC111410) Rattus norvegicus clone CH230-205L15, WORKING DRA... 48 0.79 1
(AC109661) Rattus norvegicus clone CH230-112B22, WORKING DRA... 48 0.79 1
(AC109069) Rattus norvegicus clone CH230-70F3, *** SEQUENCIN... 48 0.79 1
(AC107259) Rattus norvegicus clone CH230-185H21, WORKING DRA... 48 0.79 1
(AC107094) Rattus norvegicus clone CH230-235N17, WORKING DRA... 48 0.79 1
(AC103203) Rattus norvegicus clone CH230-28G24, *** SEQUENCI... 48 0.79 1
(AC098951) Rattus norvegicus clone CH230-173E15, WORKING DRA... 48 0.79 1
(AC097995) Rattus norvegicus clone CH230-56E12, *** SEQUENCI... 48 0.79 1
(AC097248) Rattus norvegicus clone CH230-177C11, *** SEQUENC... 48 0.79 1
(AC096620) Rattus norvegicus clone CH230-2J21, WORKING DRAFT... 48 0.79 1
(AC095319) Rattus norvegicus clone CH230-46P23, *** SEQUENCI... 48 0.79 1
(AC095145) Rattus norvegicus clone CH230-8G22, *** SEQUENCIN... 48 0.79 1
(AC094787) Rattus norvegicus clone CH230-4O14, *** SEQUENCIN... 48 0.79 1
(AC094623) Rattus norvegicus clone CH230-5D1, *** SEQUENCING... 48 0.79 1
(FP017138) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.79 1
(CU914735) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.79 1
(CU694748) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.79 1
(AC094226) Rattus norvegicus clone CH230-3B11, WORKING DRAFT... 48 0.79 1
(AC093364) Mus musculus clone RP23-60O8, WORKING DRAFT SEQUE... 48 0.79 1
(AC079499) Mus musculus clone RP23-222D21, WORKING DRAFT SEQ... 48 0.79 1
(AP001076) Homo sapiens genomic DNA, chromosome 18p11.2 clon... 48 0.79 1
(AL161418) Human DNA sequence *** SEQUENCING IN PROGRESS ***... 48 0.79 1
(AF301236) Homo sapiens chromosome 8 clone CTD-2269D11 map 8... 48 0.79 1
(AC220996) Mus musculus chromosome 7 clone RP23-222D21 map 7... 48 0.79 1
(AC184429) Strongylocentrotus purpuratus clone R3-3089I6, WO... 48 0.79 1
(AC183517) Oryctolagus cuniculus clone LB1-171O9, WORKING DR... 48 0.79 1
(AC181321) Strongylocentrotus purpuratus clone R3-115E19, WO... 48 0.79 1
(AC181125) Strongylocentrotus purpuratus clone R3-16I2, WORK... 48 0.79 1
(AC181099) Strongylocentrotus purpuratus clone R3-3047E22, W... 48 0.79 1
(AC176866) Strongylocentrotus purpuratus clone R3-31B19, WOR... 48 0.79 1
(AC176674) Strongylocentrotus purpuratus clone R3-3084M24, W... 48 0.79 1
(AC176498) Strongylocentrotus purpuratus clone R3-3072G15, W... 48 0.79 1
(AC174871) Strongylocentrotus purpuratus clone R3-3112P21, W... 48 0.79 1
(AC168681) Strongylocentrotus purpuratus clone R3-3014P16, W... 48 0.79 1
(AC168631) Strongylocentrotus purpuratus clone R3-3018O21, W... 48 0.79 1
(AC025036) Mus musculus chromosome 11 clone RP23-280G3, *** ... 48 0.79 1
(AK281428) Gryllus bimaculatus mRNA, GBcontig28289. 48 0.79 1
(BH094533) RPCI-24-357H22.TV RPCI-24 Mus musculus genomic cl... 48 0.79 1
(ET362882) S0103M15_SP6 CHORI-214 Salmo salar genomic clone ... 48 0.79 1
(ET342248) S0052K12_T7 CHORI-214 Salmo salar genomic clone S... 48 0.79 1
(ET276430) S0015E03_SP6 CHORI-214 Salmo salar genomic clone ... 48 0.79 1
(ET262086) S0052I24_T7 CHORI-214 Salmo salar genomic clone S... 48 0.79 1
(ET251329) S0111N11_SP6 CHORI-214 Salmo salar genomic clone ... 48 0.79 1
(ET244001) S0283L11_SP6 CHORI-214 Salmo salar genomic clone ... 48 0.79 1
(ED710094) GM_WBb0056N10.f GM_WBb Glycine max genomic clone ... 48 0.79 1
(DH654713) Rattus norvegicus DNA, BAC clone: RNB1-198P13, 3'... 48 0.79 1
(DH503211) Monosiga ovata DNA, fosmid clone: MOF-072N05, gen... 48 0.79 1
(CZ953223) 269809 Tomato EcoRI BAC Library Solanum lycopersi... 48 0.79 1
(CR121980) Forward strand read from insert in 5'HPRT inserti... 48 0.79 1
(AG154521) Pan troglodytes DNA, clone: RP43-018J01.T7. 48 0.79 1
(AM725614) Cucumis melo subsp. melo EST, clone HS_17-F11-M13R. 48 0.79 1
(CD473731) nad03-6ms1-a06 Nad03 Nuphar advena cDNA clone nad... 48 0.79 1
(AI489463) EST247802 tomato ovary, TAMU Solanum lycopersicum... 48 0.79 1
(AI484881) EST243142 tomato ovary, TAMU Solanum lycopersicum... 48 0.79 1
(BJ665624) Eptatretus burgeri leukocyte cDNA clone:hg131e15,... 48 0.79 1
(BJ653654) Eptatretus burgeri leukocyte cDNA clone:hg131e15,... 48 0.79 1
(BF052167) EST437414 tomato developing/immature green fruit ... 48 0.79 1
(BE353391) EST353672 tomato flower buds 0-3 mm, Cornell Univ... 48 0.79 1
(BE353362) EST353643 tomato flower buds 0-3 mm, Cornell Univ... 48 0.79 1
(AW944926) EST336976 tomato flower buds 3-8 mm, Cornell Univ... 48 0.79 1
(AC115682) Dictyostelium discoideum chromosome 2 map 4101105... 34 0.88 6
(AC175874) Strongylocentrotus purpuratus clone R3-3043B17, W... 42 0.88 5
(AE013218) Buchnera aphidicola str. Sg (Schizaphis graminum)... 32 0.89 17
(BX897694) Zebrafish DNA sequence from clone DKEY-103F3 in l... 40 0.90 3
(EJ375300) 1092963739350 Global-Ocean-Sampling_GS-28-01-01-1... 44 0.91 2
(ER599347) 1093016236053 Global-Ocean-Sampling_GS-36-01-01-2... 46 0.93 2
(AE014836) Plasmodium falciparum 3D7 chromosome 11 section 1... 34 0.95 9
(AC137021) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 42 0.96 4
(AJ235270) Rickettsia prowazekii strain Madrid E, complete g... 38 0.96 10
(AC106080) Rattus norvegicus clone CH230-109M24, WORKING DRA... 42 1.0 4
(CP000939) Clostridium botulinum B1 str. Okra, complete genome. 36 1.1 21
(AE017308) Mycoplasma mobile 163K complete genome. 30 1.1 20
(AP009904) Lotus japonicus genomic DNA, clone: LjT10I14, TM2... 44 1.2 4
(AC141680) Apis mellifera clone CH224-55I19, WORKING DRAFT S... 42 1.3 6
(CR847963) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 1.4 8
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 34 1.4 10
(AJ430034) Homo sapiens partial MUC4 gene for mucin 4, exons... 44 1.5 2
(AC180440) Strongylocentrotus purpuratus clone R3-3102L05, W... 38 1.5 7
(CU468880) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 1.5 9
(AC093155) Homo sapiens chromosome 1 clone RP11-384B12, comp... 38 1.5 9
(AC102252) Mus musculus clone RP24-171K5, WORKING DRAFT SEQU... 40 1.5 4
(AC008722) Homo sapiens chromosome 5 clone CTB-94F21, comple... 32 1.5 7
(AC132680) Rattus norvegicus clone CH230-232I23, *** SEQUENC... 34 1.6 2
(AC137473) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 34 1.6 2
(AC123463) Rattus norvegicus clone CH230-17M15, *** SEQUENCI... 34 1.6 2
(AC122604) Rattus norvegicus clone CH230-237O19, *** SEQUENC... 34 1.6 2
(AC197467) Canis familiaris, clone XX-129P12, complete seque... 36 1.6 2
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 34 1.6 2
(AC180690) Strongylocentrotus purpuratus clone R3-3086M14, W... 36 1.6 2
(AC177681) Strongylocentrotus purpuratus clone R3-1014B2, WO... 34 1.6 2
(AC180528) Strongylocentrotus purpuratus clone R3-3016G12, W... 34 1.6 2
(AC201523) Strongylocentrotus purpuratus clone R3-3090A13, W... 34 1.6 2
(CG609153) OST290049 Mus musculus 129Sv/Ev Mus musculus cDNA... 42 1.7 2
(AC201542) Strongylocentrotus purpuratus clone R3-3102A15, W... 40 1.7 5
(ET691945) CHO_OF330xp11r1.ab1 CHO_OF Nicotiana tabacum geno... 38 1.8 3
(AC007294) Arabidopsis thaliana chromosome 2 clone T26C18 ma... 34 1.8 2
(AL163528) Homo sapiens chromosome 9 BAC RP11-109K15. 38 1.9 7
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 30 1.9 11
(CU928629) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.9 5
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 32 2.0 22
(AC179586) Strongylocentrotus purpuratus clone R3-1029K18, W... 46 2.0 6
(GC697556) Sequence 12801 from patent US 6812339. 44 2.1 2
(GC697139) Sequence 12384 from patent US 6812339. 44 2.1 2
(GC699082) Sequence 14327 from patent US 6812339. 44 2.1 2
(GC699081) Sequence 14326 from patent US 6812339. 44 2.1 2
(FH340313) CHO_OF4605xg12r1.ab1 CHO_OF4 Nicotiana tabacum ge... 34 2.1 2
(EH015055) USDA-FP_187694 Lysiphlebus testaceipes adult whol... 36 2.1 2
(BJ443309) Dictyostelium discoideum cDNA clone:ddv52e14, 3' ... 34 2.2 2
(BJ384246) Dictyostelium discoideum cDNA clone:ddc48c21, 3' ... 34 2.2 2
(BM027024) GIT0000288 Root-induced cDNA library from Glomus ... 36 2.2 2
(BJ407635) Dictyostelium discoideum cDNA clone:dds43m06, 3' ... 34 2.2 2
(AU034646) Dictyostelium discoideum slug cDNA, clone SLE120. 34 2.2 2
(BJ440768) Dictyostelium discoideum cDNA clone:ddv44m15, 3' ... 34 2.2 2
(AC108637) Rattus norvegicus clone CH230-276G19, *** SEQUENC... 38 2.2 6
(BV482898) soj63f11.b1 Clint Pan troglodytes verus STS genom... 40 2.2 3
(EU124730) Solanum lycopersicum chromosome 3 clone C03HBa000... 36 2.3 7
(AC157347) Medicago truncatula clone mth2-115m3, WORKING DRA... 38 2.4 4
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 34 2.4 19
(CJ328816) Molgula tectiformis cDNA, embryo just before hatc... 36 2.4 2
(AC095906) Rattus norvegicus clone CH230-10L23, *** SEQUENCI... 40 2.4 7
(ET639776) JBVS423TF JBVS Allium cepa genomic clone JBVS4_S5... 44 2.4 2
(AC116084) Rattus norvegicus clone CH230-91A23, *** SEQUENCI... 40 2.5 7
(AC177359) Strongylocentrotus purpuratus clone R3-1032F6, WO... 42 2.5 6
(CP000102) Methanosphaera stadtmanae DSM 3091, complete genome. 34 2.6 18
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 32 2.6 16
(BJ355851) Dictyostelium discoideum cDNA clone:dda58n07, 3' ... 40 2.7 2
(BJ353459) Dictyostelium discoideum cDNA clone:dda50b11, 3' ... 40 2.8 2
(AC102273) Mus musculus chromosome 3, clone RP24-285I22, com... 46 2.8 3
(BJ344519) Dictyostelium discoideum cDNA clone:dda19i17, 3' ... 40 2.8 2
(BJ343807) Dictyostelium discoideum cDNA clone:dda17b11, 3' ... 40 2.8 2
(AC177244) Strongylocentrotus purpuratus clone R3-1034F15, W... 38 2.8 4
(BJ352162) Dictyostelium discoideum cDNA clone:dda45i23, 3' ... 40 2.8 2
(BJ347045) Dictyostelium discoideum cDNA clone:dda25o19, 3' ... 40 2.8 2
(BJ357676) Dictyostelium discoideum cDNA clone:dda64h10, 3' ... 40 2.9 2
(BJ343224) Dictyostelium discoideum cDNA clone:dda22l11, 3' ... 40 2.9 2
(BJ356049) Dictyostelium discoideum cDNA clone:dda59g01, 3' ... 40 2.9 2
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 32 2.9 15
(CT844461) Oryza sativa Indica Group EST sequence:CONTIG10787. 36 2.9 2
(FH446519) CHO_OF4702xe07r1.ab1 CHO_OF4 Nicotiana tabacum ge... 40 3.0 2
(BJ350109) Dictyostelium discoideum cDNA clone:dda38b22, 3' ... 40 3.0 2
(BJ339801) Dictyostelium discoideum cDNA clone:dda10n11, 3' ... 40 3.0 2
(AC116551) Dictyostelium discoideum chromosome 2 map complem... 34 3.1 10
(AC149881) Xenopus (Silurana) tropicalis clone CH216-75E11, ... 46 3.1 1
(BV488126) S216P61793RA8.T0 Masuku Pan troglodytes troglodyt... 46 3.1 1
(M24109) Rattus norvegicus (clone GF4) alpha2u globulin gene... 46 3.1 1
(CT990560) M.spretus DNA sequence from clone XX-CH35_359A6 o... 46 3.1 1
(CT572991) Mouse DNA sequence from clone RP24-434I23 on chro... 46 3.1 1
(AL844841) Mouse DNA sequence from clone RP23-143P18 on chro... 46 3.1 1
(AL844222) Mouse DNA sequence from clone RP23-44P13 on chrom... 46 3.1 1
(AL732614) Mouse DNA sequence from clone RP23-322G17 on chro... 46 3.1 1
(AL732329) Mouse DNA sequence from clone RP23-118K22 on chro... 46 3.1 1
(AL672062) Mouse DNA sequence from clone RP23-34D17 on chrom... 46 3.1 1
(AL671878) Mouse DNA sequence from clone RP23-184D5 on chrom... 46 3.1 1
(AL603843) Mouse DNA sequence from clone RP23-412D17 on chro... 46 3.1 1
(AE014177) Mus musculus piebald deletion region section 5 of... 46 3.1 1
(AC165262) Mus musculus BAC clone RP23-89H5 from chromosome ... 46 3.1 1
(AC160125) Mus musculus BAC clone RP23-317M11 from chromosom... 46 3.1 1
(AC159629) Mus musculus BAC clone RP24-178C15 from chromosom... 46 3.1 1
(AC159277) Mus musculus BAC clone RP23-356J2 from chromosome... 46 3.1 1
(AC158637) Mus musculus 10 BAC RP24-79K22 (Roswell Park Canc... 46 3.1 1
(AC158364) Mus musculus BAC clone RP23-187J8 from chromosome... 46 3.1 1
(AC157937) Mus musculus chromosome 1, clone RP23-417N10, com... 46 3.1 1
(AC157927) Mus musculus chromosome 3, clone RP24-85O24, comp... 46 3.1 1
(AC155263) Mus musculus BAC clone RP23-415I11 from chromosom... 46 3.1 1
(AC154670) Mus musculus BAC clone RP24-293L9 from chromosome... 46 3.1 1
(AC154206) Mus musculus BAC clone RP24-104P20 from 14, compl... 46 3.1 1
(AC153536) Mus musculus 10 BAC RP23-402F24 (Roswell Park Can... 46 3.1 1
(AC152060) Mus musculus BAC clone RP23-430C3 from chromosome... 46 3.1 1
(AC146698) Mus musculus chromosome 13, clone RP24-342B2, com... 46 3.1 1
(AC142448) Mus musculus BAC clone RP24-540M5 from chromosome... 46 3.1 1
(AC132336) Mus musculus BAC clone RP24-230N9 from chromosome... 46 3.1 1
(AC132126) Mus musculus BAC clone RP23-400E10 from 8, comple... 46 3.1 1
(AC131718) Mus musculus BAC clone RP23-171B16 from 6, comple... 46 3.1 1
(AC127288) Mus musculus BAC clone RP23-358J11 from 8, comple... 46 3.1 1
(AC126688) Mus musculus BAC clone RP23-152P20 from chromosom... 46 3.1 1
(AC125408) Mus musculus BAC clone RP23-94M23 from 3, complet... 46 3.1 1
(AC124776) Mus musculus BAC clone RP23-89D11 from 12, comple... 46 3.1 1
(AC124012) Mus musculus BAC clone RP24-357P22 from chromosom... 46 3.1 1
(AC123358) Rattus norvegicus BAC CH230-252L18 (Children's H... 46 3.1 1
(AC121574) Mus musculus BAC clone RP23-241E9 from 14, comple... 46 3.1 1
(AC121565) Mus musculus BAC clone RP23-223J11 from chromosom... 46 3.1 1
(AC118231) Mus musculus chromosome 5, clone RP23-462J24, com... 46 3.1 1
(AC116507) Mus musculus chromosome 19, clone RP24-309C17, co... 46 3.1 1
(AC114998) Mus musculus chromosome 8, clone RP23-476P11, com... 46 3.1 1
(AC111089) Mus musculus chromosome 5, clone RP23-156F20, com... 46 3.1 1
(AC108798) Mus musculus chromosome 5, clone RP23-419N6, comp... 46 3.1 1
(AC107741) Mus musculus chromosome 3, clone RP23-335P23, com... 46 3.1 1
(AC102075) Mus musculus chromosome 5, clone RP23-389F20, com... 46 3.1 1
(AC097023) Rattus norvegicus BAC CH230-35L12 (Children's Hos... 46 3.1 1
(AC096909) Rattus norvegicus 8 BAC CH230-88B13 (Children's H... 46 3.1 1
(BS000126) Pan troglodytes chromosome 22 clone:PTB-128A24, m... 46 3.1 1
(AL954248) Pan troglodytes chromosome 22 clone PTB-061A04 ma... 46 3.1 1
(AC204238) Macaca mulatta BAC CH250-496K21 (Children's Hosp... 46 3.1 1
(AC202673) Macaca mulatta BAC CH250-3G8 (Children's Hospita... 46 3.1 1
(AC193262) Pan troglodytes BAC clone CH251-300C2 from chromo... 46 3.1 1
(AC187621) Pan troglodytes BAC clone CH251-458G17 from chrom... 46 3.1 1
(AC182644) Pan troglodytes BAC clone CH251-64L5 from chromos... 46 3.1 1
(EU620608) Readeriella destructans strain CMW19831 microsate... 46 3.1 1
(EU620607) Readeriella destructans strain CMW19908 microsate... 46 3.1 1
(EU620606) Readeriella destructans strain CMW19855 microsate... 46 3.1 1
(EU620605) Readeriella destructans strain CMW19845 microsate... 46 3.1 1
(EU620604) Readeriella destructans strain CMW19864 microsate... 46 3.1 1
(EU620603) Readeriella destructans strain CMW19892 microsate... 46 3.1 1
(EU620602) Readeriella destructans strain CMW19933 microsate... 46 3.1 1
(EU620601) Readeriella destructans strain CMW19837 microsate... 46 3.1 1
(EF686414) Kirramyces destructans strain CMW19921 microsatel... 46 3.1 1
(EF686413) Kirramyces destructans strain CMW19834 microsatel... 46 3.1 1
(EF686412) Kirramyces destructans strain CMW19831 microsatel... 46 3.1 1
(EF686411) Kirramyces destructans strain CMW19846 microsatel... 46 3.1 1
(EF686410) Kirramyces destructans strain CMW19851 microsatel... 46 3.1 1
(EF686409) Kirramyces destructans strain CMW19832 microsatel... 46 3.1 1
(EF686408) Kirramyces destructans strain CMW19850 microsatel... 46 3.1 1
(EF686407) Kirramyces destructans strain CMW19891 microsatel... 46 3.1 1
(EF686406) Kirramyces destructans strain CMW19845 microsatel... 46 3.1 1
(EF686405) Kirramyces destructans strain CMW19842 microsatel... 46 3.1 1
(EF686404) Kirramyces destructans strain CMW19887 microsatel... 46 3.1 1
(EF686403) Kirramyces destructans strain CMW19886 microsatel... 46 3.1 1
(EF686402) Kirramyces destructans strain CMW19835 microsatel... 46 3.1 1
(EF686401) Kirramyces destructans strain CMW19860 microsatel... 46 3.1 1
(EF686400) Kirramyces destructans strain CMW19854 microsatel... 46 3.1 1
(EF686399) Kirramyces destructans strain CMW19892 microsatel... 46 3.1 1
(EF686398) Kirramyces destructans strain CMW19855 microsatel... 46 3.1 1
(EF686397) Kirramyces destructans strain CMW19853 microsatel... 46 3.1 1
(EF686396) Kirramyces destructans strain CMW19837 microsatel... 46 3.1 1
(EF686395) Kirramyces destructans strain CMW19852 microsatel... 46 3.1 1
(EF686394) Kirramyces destructans strain CMW19864 microsatel... 46 3.1 1
(EF686393) Kirramyces destructans strain CMW19908 microsatel... 46 3.1 1
(EF686392) Kirramyces destructans strain CMW19910 microsatel... 46 3.1 1
(EF686391) Kirramyces destructans strain CMW19933 microsatel... 46 3.1 1
(EF686390) Kirramyces destructans strain CMW19909 microsatel... 46 3.1 1
(EF686389) Kirramyces destructans strain CMW19913 microsatel... 46 3.1 1
(EF686388) Kirramyces destructans strain CMW19922 microsatel... 46 3.1 1
(EF686387) Kirramyces destructans strain CMW19911 microsatel... 46 3.1 1
(EF686386) Kirramyces destructans strain CMW19914 microsatel... 46 3.1 1
(EF686385) Kirramyces destructans strain CMW19934 microsatel... 46 3.1 1
(EF686384) Kirramyces destructans strain CMW15092 microsatel... 46 3.1 1
(EF686383) Kirramyces destructans strain CMW15090 microsatel... 46 3.1 1
(EF686382) Kirramyces destructans strain CMW15089 microsatel... 46 3.1 1
(EF686381) Kirramyces destructans strain CMW16126 microsatel... 46 3.1 1
(EF686380) Kirramyces destructans strain CMW16137 microsatel... 46 3.1 1
(EF686379) Kirramyces destructans strain CMW16138 microsatel... 46 3.1 1
(EF686378) Kirramyces destructans strain CMW16120 microsatel... 46 3.1 1
(EF686377) Kirramyces destructans strain CMW16123 microsatel... 46 3.1 1
(EF686376) Kirramyces destructans strain CMW16124 microsatel... 46 3.1 1
(EF686375) Kirramyces destructans strain CMW16136 microsatel... 46 3.1 1
(EF686374) Kirramyces destructans strain CMW13710 microsatel... 46 3.1 1
(EF686373) Kirramyces destructans strain CMW13330 microsatel... 46 3.1 1
(EF686372) Kirramyces destructans strain CMW13709 microsatel... 46 3.1 1
(EF686371) Kirramyces destructans strain CMW13337 microsatel... 46 3.1 1
(EF686370) Kirramyces destructans strain CMW13705 microsatel... 46 3.1 1
(CU927996) S.lycopersicum DNA sequence from clone LE_HBa-61A... 46 3.1 1
(CU012060) M.truncatula DNA sequence from clone MTH2-62K13 o... 46 3.1 1
(CT834498) Oryza sativa (indica cultivar-group) cDNA clone:O... 46 3.1 1
(AY133808) Arabidopsis thaliana clone U09961 unknown protein... 46 3.1 1
(AY080749) Arabidopsis thaliana unknown protein (At4g10330) ... 46 3.1 1
(AP008209) Oryza sativa (japonica cultivar-group) genomic DN... 46 3.1 1
(AP003433) Oryza sativa Japonica Group genomic DNA, chromoso... 46 3.1 1
(AM487038) Vitis vinifera contig VV78X081504.11, whole genom... 46 3.1 1
(AL161517) Arabidopsis thaliana DNA chromosome 4, contig fra... 46 3.1 1
(AL049488) Arabidopsis thaliana DNA chromosome 4, BAC clone ... 46 3.1 1
(AK070706) Oryza sativa Japonica Group cDNA clone:J023063B10... 46 3.1 1
(AJ748725) Olea europaea microsatellite DNA, clone IAS-pOe19. 46 3.1 1
(AC135495) Oryza sativa Japonica Group chromosome 3 clone OJ... 46 3.1 1
(AC119748) Genomic sequence for Oryza sativa, Nipponbare str... 46 3.1 1
(EA686036) Sequence 64915 from patent US 7365185. 46 3.1 1
(EA684730) Sequence 63609 from patent US 7365185. 46 3.1 1
(EA648026) Sequence 26905 from patent US 7365185. 46 3.1 1
(DL173295) Methods for Identifying the Target of a Compound ... 46 3.1 1
(DD404166) Method of screening a gene related to a quantity ... 46 3.1 1
(CQ603849) Sequence 31607 from Patent WO0171042. 46 3.1 1
(CQ603848) Sequence 31606 from Patent WO0171042. 46 3.1 1
(AX488855) Sequence 6155 from Patent WO02053728. 46 3.1 1
(GN008013) Sequence 454 from Patent EP2014669. 46 3.1 1
(AR550656) Sequence 5787 from patent US 6747137. 46 3.1 1
(U80452) Caenorhabditis elegans cosmid C16C8, complete seque... 46 3.1 1
(BX538352) Cryptosporidium parvum chromosome 6, complete seq... 46 3.1 1
(AE013599) Drosophila melanogaster chromosome 2R, complete s... 46 3.1 1
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 46 3.1 1
(AC008351) Drosophila melanogaster, chromosome 2R, region 59... 46 3.1 1
(U95743) Homo sapiens chromosome 16 BAC clone CIT987-SK65D3,... 46 3.1 1
(CU137653) Human DNA sequence from clone XX-C0511C0695L on c... 46 3.1 1
(AL450284) Human DNA sequence from clone RP11-555L24 on chro... 46 3.1 1
(AL391005) Human DNA sequence from clone RP11-288A5 on chrom... 46 3.1 1
(AL161725) Human DNA sequence from clone RP11-165F24 on chro... 46 3.1 1
(AL049849) Homo sapiens chromosome 21 BAC B1L1C6. 46 3.1 1
(AC233314) Homo sapiens FOSMID clone ABC7-42061100P2 from ch... 46 3.1 1
(AC133638) Homo sapiens chromosome 17, clone CTD-2125J20, co... 46 3.1 1
(AC133012) Homo sapiens chromosome 17, clone RP11-582A10, co... 46 3.1 1
(AC124319) Homo sapiens chromosome 17, clone CTD-2047H16, co... 46 3.1 1
(AC109491) Homo sapiens chromosome 5 clone RP11-727F19, comp... 46 3.1 1
(AC104059) Homo sapiens BAC clone RP13-514E23 from 4, comple... 46 3.1 1
(AC098591) Homo sapiens BAC clone RP11-333E13 from 4, comple... 46 3.1 1
(AC093722) Homo sapiens BAC clone CTD-2012I17 from 4, comple... 46 3.1 1
(AC087530) Homo sapiens chromosome 17, clone RP11-313F15, co... 46 3.1 1
(AC023421) Homo sapiens chromosome 18, clone RP11-116O18, co... 46 3.1 1
(AC021860) Homo sapiens BAC clone RP11-617D20 from 4, comple... 46 3.1 1
(AC012417) Homo sapiens chromosome 18, clone RP11-408H20, co... 46 3.1 1
(AC004169) Homo sapiens chromosome 4 clone C0236G06 map 4p16... 46 3.1 1
(AC159600) Rhinolophus ferrumequinum clone VMRC7-196M11, WOR... 46 3.1 1
(AC151295) Mus musculus chromosome 17 clone RP23-116P24, ***... 46 3.1 1
(AC148243) Zea mays clone ZMMBBc0364A01, *** SEQUENCING IN P... 46 3.1 1
(AC142043) Rattus norvegicus clone CH230-248C16, *** SEQUENC... 46 3.1 1
(AC136677) Rattus norvegicus clone CH230-5P17, WORKING DRAFT... 46 3.1 1
(AC136676) Rattus norvegicus clone CH230-141C19, *** SEQUENC... 46 3.1 1
(AC135938) Rattus norvegicus clone CH230-345C4, WORKING DRAF... 46 3.1 1
(AC133658) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 46 3.1 1
(AC133251) Rattus norvegicus clone CH230-53M6, *** SEQUENCIN... 46 3.1 1
(AC132762) Rattus norvegicus clone CH230-310C19, WORKING DRA... 46 3.1 1
(AC131397) Rattus norvegicus clone CH230-235N10, *** SEQUENC... 46 3.1 1
(AC131204) Rattus norvegicus clone CH230-258P17, WORKING DRA... 46 3.1 1
(AC130874) Rattus norvegicus clone CH230-12E10, *** SEQUENCI... 46 3.1 1
(AC130021) Rattus norvegicus clone CH230-509H12, WORKING DRA... 46 3.1 1
(AC129830) Rattus norvegicus clone CH230-116B18, WORKING DRA... 46 3.1 1

>(BJ430427) Dictyostelium discoideum cDNA clone:ddv7a07, 3' end,
single read.
Length = 657

Score = 801 bits (404), Expect(4) = 0.0
Identities = 406/407 (99%)
Strand = Plus / Minus


Query: 732 atgatttaaataaagaattaaaattgaaagcacgtaatgatccatcagtaaaagatttaa 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 atgatttaaataaagaattaaaattgaaagcacgtaatgatccatcagtaaaagatttaa 415


Query: 792 aactttcattatattcaggtcacgatactacattggcagcattattagtgggttacgata 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 aactttcattatattcaggtcacgatactacattggcagcattattagtgggttacgata 355


Query: 852 tgtatgaagataaaattcatccagtgacttcatcaactttagaattccttttaatgcaag 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tgtatgaagataaaattcatccagtgacttcatcaactttagaattccttttaatgcaag 295


Query: 912 ataaagattacaaagaaccagaagttgtgaaaatcacaaaatcaatcgaaaaggaattaa 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ataaagattacaaagaaccagaagttgtgaaaatcacaaaatcaatcgaaaaggaattaa 235


Query: 972 tcaatcatcaatatgttaaagttatctataatcataaaccaattcatattggaccatgta 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 tcaatcatcaatatgttaaagttatctataatcataaaccaattcatattggaccatgta 175


Query: 1032 aagataaagaggtagatggtatgtgtccactctctgaattccttaaaatctcacaatcaa 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 aagataaagaggtagatggtatgtgtccactctctgaattccttaaaatctcacaatcaa 115


Query: 1092 tcattccaacaaactatgatgaacaatcaaaacttactcaacttgat 1138
|||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 114 tcattccaacaaactatgatgaacaatcaaaacttactcaacttnat 68

Score = 365 bits (184), Expect(4) = 0.0
Identities = 184/184 (100%)
Strand = Plus / Minus


Query: 548 gaggatttagatcatatgcaggattagtgaattcatttgattgttttagaaataatggtt 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 gaggatttagatcatatgcaggattagtgaattcatttgattgttttagaaataatggtt 598


Query: 608 taccaattccaaaaggattaacaaaagatattattcaaagaatgtatgaagagagtgcaa 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 taccaattccaaaaggattaacaaaagatattattcaaagaatgtatgaagagagtgcaa 538


Query: 668 aagaatttaagagtgcaagatatttcccagagatgtcgatattgggtattggtagattcg 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 aagaatttaagagtgcaagatatttcccagagatgtcgatattgggtattggtagattcg 478


Query: 728 ttga 731
||||
Sbjct: 477 ttga 474

Score = 77.8 bits (39), Expect(4) = 0.0
Identities = 41/42 (97%)
Strand = Plus / Minus


Query: 1164 aagattaaaaataatatgtttcaataaattatcattattttt 1205
||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 43 aagattaaaaanaatatgtttcaataaattatcattattttt 2

Score = 32.2 bits (16), Expect(4) = 0.0
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 1146 gatatttatcattaat 1161
||||||||||||||||
Sbjct: 60 gatatttatcattaat 45

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,724,758,650
Number of extensions: 112978780
Number of successful extensions: 10644459
Number of sequences better than 10.0: 919
Length of query: 1205
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 1181
Effective length of database: 99,340,224,878
Effective search space: 117320805580918
Effective search space used: 117320805580918
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.19
Homology vs Protein
Query= Contig-U02102-1 (Contig-U02102-1Q) /CSM_Contig/Contig-U02102-1Q.Seq.d
(1205 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54P71) RecName: Full=Probable acid phosphatase DDB_G0284755; ... 241 2e-90
(Q54PR9) RecName: Full=Counting factor 60; Flags: Precursor; &D... 50 2e-04
AJ720873_1(AJ720873|pid:none) Gallus gallus mRNA for hypothetica... 49 3e-04
BC125717_1(BC125717|pid:none) Xenopus tropicalis hypothetical pr... 45 0.007
BC154980_1(BC154980|pid:none) Xenopus laevis hypothetical protei... 44 0.011
AK300569_1(AK300569|pid:none) Homo sapiens cDNA FLJ53923 complet... 44 0.011
AK298439_1(AK298439|pid:none) Homo sapiens cDNA FLJ51033 complet... 44 0.011
BC003160_1(BC003160|pid:none) Homo sapiens acid phosphatase 2, l... 44 0.011
BC118766_1(BC118766|pid:none) Xenopus tropicalis lysosomal acid ... 44 0.015
(Q4R5N9) RecName: Full=Lysosomal acid phosphatase; Shor... 43 0.026
(Q5NVF6) RecName: Full=Lysosomal acid phosphatase; Shor... 43 0.026
EU365869_1(EU365869|pid:none) Pteromalus puparum venom acid phos... 43 0.026
BC081823_1(BC081823|pid:none) Rattus norvegicus acid phosphatase... 42 0.033
BC007460_1(BC007460|pid:none) Homo sapiens acid phosphatase, pro... 42 0.057
AF321918_2(AF321918|pid:none) Homo sapiens testicular acid phosp... 33 0.071
(Q8BP40) RecName: Full=Lysophosphatidic acid phosphatase type 6;... 41 0.074
AJ389444_1(AJ389444|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.13
AJ389437_1(AJ389437|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.13
DQ150471_1(DQ150471|pid:none) Gorilla gorilla prostatic acid pho... 40 0.13
Y18841_1(Y18841|pid:none) Drosophila guanche Acph-1 gene. 40 0.13
AJ389429_1(AJ389429|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.13
AJ389448_1(AJ389448|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.13
AJ389441_1(AJ389441|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.13
X52174_1(X52174|pid:none) Human ACPP mRNA for prostatic acid pho... 40 0.13
AY892635_1(AY892635|pid:none) Synthetic construct Homo sapiens c... 40 0.13
(Q09549) RecName: Full=Putative acid phosphatase F26C11.1; ... 40 0.13
Y18840_1(Y18840|pid:none) Drosophila madeirensis Acph-1 gene. 40 0.13
AJ389446_1(AJ389446|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.13
BC008493_1(BC008493|pid:none) Homo sapiens acid phosphatase, pro... 40 0.13
X53605_1(X53605|pid:none) Human mRNA for prostatic acid phosphat... 40 0.13
AJ389434_1(AJ389434|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.17
AJ564005_1(AJ564005|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.17
AJ389458_1(AJ389458|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.17
AJ563982_1(AJ563982|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.17
AF293415_1(AF293415|pid:none) Giardia intestinalis acid phosphat... 40 0.17
AB209248_1(AB209248|pid:none) Homo sapiens mRNA for acid phospha... 40 0.17
AJ389431_1(AJ389431|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.17
AJ389463_1(AJ389463|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.17
AJ563977_1(AJ563977|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.22
AE014297_4670(AE014297|pid:none) Drosophila melanogaster chromos... 40 0.22
(B1H1P9) RecName: Full=Lysosomal acid phosphatase; Shor... 40 0.22
BC016344_1(BC016344|pid:none) Homo sapiens acid phosphatase, pro... 40 0.22
AJ563969_1(AJ563969|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.22
AJ389443_1(AJ389443|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.22
AJ389475_1(AJ389475|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.22
AJ563966_1(AJ563966|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.22
DQ150470_1(DQ150470|pid:none) Pan paniscus prostatic acid phosph... 40 0.22
AJ563968_1(AJ563968|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.22
CP001331_473(CP001331|pid:none) Micromonas sp. RCC299 chromosome... 40 0.22
AJ389425_1(AJ389425|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.22
AJ389466_1(AJ389466|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.22
AJ563990_1(AJ563990|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.22
AJ564003_1(AJ564003|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.22
AJ564007_1(AJ564007|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.22
AJ563988_1(AJ563988|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.22
AJ389449_1(AJ389449|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.22
DQ150469_1(DQ150469|pid:none) Pan troglodytes prostatic acid pho... 40 0.22
DQ150473_3(DQ150473|pid:none) Symphalangus syndactylus prostatic... 40 0.22
DQ150472_1(DQ150472|pid:none) Pongo pygmaeus prostatic acid phos... 40 0.22
AJ389433_1(AJ389433|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.22
AJ563989_1(AJ563989|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.22
(Q0P5F0) RecName: Full=Lysosomal acid phosphatase; Shor... 40 0.22
AE014297_4671(AE014297|pid:none) Drosophila melanogaster chromos... 40 0.22
AJ389424_1(AJ389424|pid:none) Drosophila subobscura Acph-1 gene ... 40 0.22
BC099131_1(BC099131|pid:none) Rattus norvegicus acid phosphatase... 39 0.28
AJ389450_1(AJ389450|pid:none) Drosophila subobscura Acph-1 gene ... 39 0.28
AJ389457_1(AJ389457|pid:none) Drosophila subobscura Acph-1 gene ... 39 0.28
AJ389455_1(AJ389455|pid:none) Drosophila subobscura Acph-1 gene ... 39 0.28
(A6H730) RecName: Full=Prostatic acid phosphatase; EC=3... 39 0.37
AY134440_1(AY134440|pid:none) Meloidogyne incognita putative eso... 39 0.48
DQ058012_1(DQ058012|pid:none) Apis mellifera venom allergen acid... 38 0.63
AB271538_1(AB271538|pid:none) Drosophila virilis Acph gene for a... 38 0.63
NRL(1RPA) Prostatic acid phosphatase (EC 3.1.3.2) complexed with... 38 0.82
AK036973_1(AK036973|pid:none) Mus musculus adult female vagina c... 38 0.82
DQ826426_1(DQ826426|pid:none) Rattus norvegicus prostatic acid p... 38 0.82
(Q66H78) RecName: Full=Acid phosphatase-like protein 2; ... 38 0.82
CP000721_645(CP000721|pid:none) Clostridium beijerinckii NCIMB 8... 37 1.1
(Q8BHA9) RecName: Full=Acid phosphatase-like protein 2; ... 37 1.1
AK296292_1(AK296292|pid:none) Homo sapiens cDNA FLJ50551 complet... 37 1.4
BC036701_1(BC036701|pid:none) Homo sapiens acid phosphatase-like... 37 1.4
(Q0IHQ9) RecName: Full=Acid phosphatase-like protein 2; ... 37 1.8
BC090765_1(BC090765|pid:none) Danio rerio zgc:113200, mRNA (cDNA... 37 1.8
DQ150475_1(DQ150475|pid:none) Macaca mulatta prostatic acid phos... 37 1.8
T15933(T15933) hypothetical protein EGAP2.3 - Caenorhabditis ele... 36 2.4
AB030038_1(AB030038|pid:none) Mus musculus mRNA for mPACPL1, com... 36 2.4
CP000049_208(CP000049|pid:none) Borrelia turicatae 91E135, compl... 36 3.1
CP000439_22(CP000439|pid:none) Francisella tularensis subsp. nov... 36 3.1
CP000915_9(CP000915|pid:none) Francisella tularensis subsp. medi... 36 3.1
AL590447_18(AL590447|pid:none) chromosome VII of strain GB-M1 of... 36 3.1
(Q5R8C0) RecName: Full=Lysophosphatidic acid phosphatase type 6;... 36 3.1
(P20646) RecName: Full=Prostatic acid phosphatase; EC=3... 35 4.1
BC073113_1(BC073113|pid:none) Xenopus laevis MGC83618 protein, m... 35 5.3
AC141323_6(AC141323|pid:none) Medicago truncatula clone mth2-6a2... 35 5.3
AF216223_1(AF216223|pid:none) Mus musculus lysophosphatidic acid... 35 5.3
FN357295_53(FN357295|pid:none) Schistosoma mansoni genome sequen... 35 5.3
(Q8CE08) RecName: Full=Prostatic acid phosphatase; EC=3... 35 5.3
BX571857_36(BX571857|pid:none) Staphylococcus aureus strain MSSA... 35 7.0
AF210243_1(AF210243|pid:none) Mus musculus prostatic acid phosph... 35 7.0
CT030733_1(CT030733|pid:none) Mouse DNA sequence from clone RP23... 35 7.0
T16883(T16883)hypothetical protein T16D1.2 - Caenorhabditis eleg... 34 9.1

>(Q54P71) RecName: Full=Probable acid phosphatase DDB_G0284755;
EC=3.1.3.2;
Length = 473

Score = 241 bits (614), Expect(2) = 2e-90
Identities = 117/142 (82%), Positives = 129/142 (90%)
Frame = +2

Query: 728 LNDLNKELKLKARNDPSVKDLKLSLYSGHDTTLAALLVGYDMYEDKIHPVTSSTLEFLLM 907
+NDL K++ LK+ NDPSVKDLKLSLYSGHDTTLAALLV YDMYED +HPVTSS LE+LL
Sbjct: 330 VNDLTKQMYLKSVNDPSVKDLKLSLYSGHDTTLAALLVAYDMYEDNVHPVTSSALEYLLF 389

Query: 908 QDKDYKEPEVVKITKSIEKELINHQYVKVIYNHKPIHIGPCKDKEVDGMCPLSEFLKISQ 1087
QDK+YKEPEVV TKS EKELINHQYVKVI+NHKPIHIGPCKDKEVDGMCPLSEFLKISQ
Sbjct: 390 QDKNYKEPEVV--TKSNEKELINHQYVKVIFNHKPIHIGPCKDKEVDGMCPLSEFLKISQ 447

Query: 1088 SIIPTNYDEQSKLTQLDKKRYL 1153
SIIPTNYDEQSK+T +K +Y+
Sbjct: 448 SIIPTNYDEQSKITDEEKNKYI 469

Score = 117 bits (292), Expect(2) = 2e-90
Identities = 56/74 (75%), Positives = 62/74 (83%)
Frame = +1

Query: 508 IFXXXXEESSFRARGFRSYAGLVNSFDCFRNNGLPIPKGLTKDIIQRMYEESAKEFKSAR 687
IF +++F +RSYAGLVNSFDCFRNNGLP+PKG T D+IQRMYEESAKEFKSAR
Sbjct: 257 IFEDSKFDTAFYVPSWRSYAGLVNSFDCFRNNGLPLPKGFTNDVIQRMYEESAKEFKSAR 316

Query: 688 YFPEMSILGIGRFV 729
FPEMSILGIGRFV
Sbjct: 317 LFPEMSILGIGRFV 330

Score = 187 bits (475), Expect = 6e-46
Identities = 86/125 (68%), Positives = 104/125 (83%)
Frame = +1

Query: 139 LQTNINSRDLKNEHSDPKFKFSPLRSTDVHLEDYDNEKYKLKFIQIVTRHGRRTPESNRT 318
LQT + D KN+H+DP FKF LRST V +++Y+ E Y+LKF+QI+TRHGRRTPES R
Sbjct: 45 LQTLVKEEDFKNQHTDPNFKFLALRSTKVPIDEYNPENYQLKFVQIITRHGRRTPESKRY 104

Query: 319 PLTMWMCNSMDHLISNKDSPRPNCNPGQLTVLGIVDQINVGKIYRKLFIDHLGFLDSQYN 498
PLTMW CNS+D LI+NKD+ RP+CN GQLTVLGIVDQINVGK YR LFI++L FLD++YN
Sbjct: 105 PLTMWTCNSLDQLITNKDTSRPDCNMGQLTVLGIVDQINVGKAYRNLFINNLHFLDNKYN 164

Query: 499 KDQIF 513
KDQIF
Sbjct: 165 KDQIF 169

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,632,671,411
Number of extensions: 29980062
Number of successful extensions: 74568
Number of sequences better than 10.0: 100
Number of HSP's gapped: 74455
Number of HSP's successfully gapped: 112
Length of query: 401
Length of database: 1,051,180,864
Length adjustment: 131
Effective length of query: 270
Effective length of database: 627,191,635
Effective search space: 169341741450
Effective search space used: 169341741450
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.39 gvh: 0.47 alm: 0.47 top: 0.53 tms: 0.00 mit: 0.28 mip: 0.03
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

48.0 %: nuclear
28.0 %: cytoplasmic
8.0 %: cytoskeletal
8.0 %: vesicles of secretory system
4.0 %: vacuolar
4.0 %: mitochondrial

>> prediction for Contig-U02102-1 is nuc

VS (DIR, S) 1
VH (FL, L) 0
VF (FL, S) 1
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0