Homology vs CSM-cDNA |
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Homology vs DNA |
Query= Contig-U13159-1 (Contig-U13159-1Q) /CSM_Contig/Contig-U13159-1Q.Seq.d (268 letters)
Database: ddbj_A 92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(BJ386119) Dictyostelium discoideum cDNA clone:ddc57p03, 3' ... 103 2e-28 2 (BJ356375) Dictyostelium discoideum cDNA clone:dda60j02, 3' ... 92 7e-25 2 (BJ349935) Dictyostelium discoideum cDNA clone:dda38k03, 3' ... 80 2e-19 2 (BJ383148) Dictyostelium discoideum cDNA clone:ddc52c06, 3' ... 78 2e-15 2 (BJ350736) Dictyostelium discoideum cDNA clone:dda40i20, 3' ... 66 3e-15 2 (BJ349007) Dictyostelium discoideum cDNA clone:dda35f06, 3' ... 56 2e-14 2 (BJ381587) Dictyostelium discoideum cDNA clone:ddc42b03, 3' ... 86 7e-13 1 (BJ381367) Dictyostelium discoideum cDNA clone:ddc41e12, 3' ... 86 7e-13 1 (BJ357269) Dictyostelium discoideum cDNA clone:dda63a06, 3' ... 86 7e-13 1 (BJ355277) Dictyostelium discoideum cDNA clone:dda56e10, 3' ... 86 7e-13 1 (BJ355166) Dictyostelium discoideum cDNA clone:dda55o20, 3' ... 86 7e-13 1 (BJ354405) Dictyostelium discoideum cDNA clone:dda53c15, 3' ... 86 7e-13 1 (BJ349050) Dictyostelium discoideum cDNA clone:dda35p06, 3' ... 86 7e-13 1 (BJ384031) Dictyostelium discoideum cDNA clone:ddc48b05, 3' ... 80 4e-11 1 (BJ356617) Dictyostelium discoideum cDNA clone:dda60k20, 3' ... 80 4e-11 1 (BJ351505) Dictyostelium discoideum cDNA clone:dda43o14, 3' ... 80 4e-11 1 (BJ347868) Dictyostelium discoideum cDNA clone:dda31o07, 3' ... 80 4e-11 1 (BJ355132) Dictyostelium discoideum cDNA clone:dda55i19, 3' ... 78 2e-10 1 (BJ355112) Dictyostelium discoideum cDNA clone:dda55e19, 3' ... 78 2e-10 1 (BJ344622) Dictyostelium discoideum cDNA clone:dda19n24, 3' ... 78 2e-10 1 (AU052855) Dictyostelium discoideum slug cDNA, clone SLF214. 72 1e-08 1 (AU052790) Dictyostelium discoideum slug cDNA, clone SLF104. 72 1e-08 1 (AU039490) Dictyostelium discoideum slug cDNA, clone SLH882. 72 1e-08 1 (AU038832) Dictyostelium discoideum slug cDNA, clone SSL537. 72 1e-08 1 (AU034939) Dictyostelium discoideum slug cDNA, clone SLE370. 72 1e-08 1 (AU034927) Dictyostelium discoideum slug cDNA, clone SLE350. 72 1e-08 1 (AU034792) Dictyostelium discoideum slug cDNA, clone SLE336. 72 1e-08 1 (AU033699) Dictyostelium discoideum slug cDNA, clone SLB330. 72 1e-08 1 (AU033416) Dictyostelium discoideum slug cDNA, clone SLA743. 72 1e-08 1 (AU033415) Dictyostelium discoideum slug cDNA, clone SLA742. 72 1e-08 1 (C94367) Dictyostelium discoideum slug cDNA, clone SSK891. 72 1e-08 1 (C93110) Dictyostelium discoideum slug cDNA, clone SSM566. 72 1e-08 1 (C90537) Dictyostelium discoideum slug cDNA, clone SSI690. 72 1e-08 1 (C90536) Dictyostelium discoideum slug cDNA, clone SSI689. 72 1e-08 1 (BJ384266) Dictyostelium discoideum cDNA clone:ddc48h21, 3' ... 72 1e-08 1 (BJ339156) Dictyostelium discoideum cDNA clone:dda64i10, 5' ... 72 1e-08 1 (BJ338719) Dictyostelium discoideum cDNA clone:dda62a19, 5' ... 72 1e-08 1 (BJ331185) Dictyostelium discoideum cDNA clone:dda34a09, 5' ... 72 1e-08 1 (BJ384009) Dictyostelium discoideum cDNA clone:ddc47n19, 3' ... 68 2e-07 1 (BJ340281) Dictyostelium discoideum cDNA clone:dda12m12, 3' ... 64 3e-06 1 (BJ403785) Dictyostelium discoideum cDNA clone:dds26c12, 3' ... 56 6e-04 1 (BJ385455) Dictyostelium discoideum cDNA clone:ddc55c05, 3' ... 56 6e-04 1 (BJ384268) Dictyostelium discoideum cDNA clone:ddc48h23, 3' ... 56 6e-04 1 (BJ383184) Dictyostelium discoideum cDNA clone:ddc52l03, 3' ... 56 6e-04 1 (BJ378596) Dictyostelium discoideum cDNA clone:ddc32a11, 3' ... 56 6e-04 1 (BJ351535) Dictyostelium discoideum cDNA clone:dda43f20, 3' ... 56 6e-04 1 (BJ348030) Dictyostelium discoideum cDNA clone:dda31p19, 3' ... 56 6e-04 1 (BJ347995) Dictyostelium discoideum cDNA clone:dda31i21, 3' ... 56 6e-04 1 (BJ340050) Dictyostelium discoideum cDNA clone:dda11n12, 3' ... 54 0.003 1 (BJ348580) Dictyostelium discoideum cDNA clone:dda33m18, 3' ... 44 0.008 2 (BJ348106) Dictyostelium discoideum cDNA clone:dda32o04, 3' ... 52 0.010 1 (BJ356916) Dictyostelium discoideum cDNA clone:dda61j19, 3' ... 50 0.039 1 (BJ350162) Dictyostelium discoideum cDNA clone:dda38o23, 3' ... 50 0.039 1 (BJ348776) Dictyostelium discoideum cDNA clone:dda34g11, 3' ... 48 0.15 1 (BJ380657) Dictyostelium discoideum cDNA clone:ddc38j24, 3' ... 46 0.61 1 (BJ379481) Dictyostelium discoideum cDNA clone:ddc35b06, 3' ... 46 0.61 1 (BJ409767) Dictyostelium discoideum cDNA clone:dds42n05, 3' ... 44 2.4 1 (BJ381743) Dictyostelium discoideum cDNA clone:ddc42c15, 3' ... 44 2.4 1 (BJ378492) Dictyostelium discoideum cDNA clone:ddc31l02, 3' ... 44 2.4 1 (BJ378002) Dictyostelium discoideum cDNA clone:ddc26a24, 3' ... 42 9.5 1
>(BJ386119) Dictyostelium discoideum cDNA clone:ddc57p03, 3' end, single read. Length = 259
Score = 103 bits (52), Expect(2) = 2e-28 Identities = 115/115 (100%) Strand = Plus / Minus
Query: 122 tgcncttggggtntttanttttggtggnaaaaaaggttntgnctactggaaancaagtca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 tgcncttggggtntttanttttggtggnaaaaaaggttntgnctactggaaancaagtca 89
Query: 182 aggngntncnanggccncntnaaangccnatcccctttangaaancnatccntca 236 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88 aggngntncnanggccncntnaaangccnatcccctttangaaancnatccntca 34
Score = 56.0 bits (28), Expect(2) = 2e-28 Identities = 40/40 (100%) Strand = Plus / Minus
Query: 13 aaaaagggacttgngagtttgntgatttngatccnaaacc 52 |||||||||||||||||||||||||||||||||||||||| Sbjct: 257 aaaaagggacttgngagtttgntgatttngatccnaaacc 218
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 92845959 Number of Hits to DB: 26,412,041 Number of extensions: 1217540 Number of successful extensions: 6660 Number of sequences better than 10.0: 63 Length of query: 268 Length of database: 95,242,211,685 Length adjustment: 23 Effective length of query: 245 Effective length of database: 93,106,754,628 Effective search space: 22811154883860 Effective search space used: 22811154883860 X1: 11 (21.8 bits) S2: 21 (42.1 bits)
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Homology vs Protein |
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