| Contig-U13141-1 |
| Contig ID |
Contig-U13141-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
927 |
| Chromosome number (1..6, M) |
4 |
| Chromosome length |
5430582 |
| Start point |
1793604 |
| End point |
1792676 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
5 |
| Number of EST |
5 |
| Link to clone list |
U13141 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.12. 6 |
| Homology vs DNA |
Query= Contig-U13141-1 (Contig-U13141-1Q) /CSM_Contig/Contig-U13141-1Q.Seq.d
(927 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ425232) Dictyostelium discoideum cDNA clone:ddv55e03, 5' ... 1251 0.0 1
(BJ370881) Dictyostelium discoideum cDNA clone:ddc55f21, 5' ... 1168 0.0 1
(BJ424204) Dictyostelium discoideum cDNA clone:ddv51p15, 5' ... 1144 0.0 1
(BJ424262) Dictyostelium discoideum cDNA clone:ddv51k22, 5' ... 1090 0.0 1
(BJ424909) Dictyostelium discoideum cDNA clone:ddv54b05, 5' ... 918 0.0 1
(EJ798581) 1093017414333 Global-Ocean-Sampling_GS-30-02-01-1... 46 0.11 2
(BJ366514) Dictyostelium discoideum cDNA clone:ddc39b08, 5' ... 32 0.14 3
(AC009387) Homo sapiens 12 BAC RP11-110L15 (Roswell Park Can... 38 0.20 4
(AC068640) Homo sapiens 12 BAC RP11-105I4 (Roswell Park Canc... 38 0.20 4
(BJ422265) Dictyostelium discoideum cDNA clone:ddv45k09, 5' ... 32 0.46 3
(AP002060) Arabidopsis thaliana genomic DNA, chromosome 3, B... 38 0.53 4
(BV321681) S236P6259FF1.T0 AlaskanMalamute Canis familiaris ... 48 0.60 1
(EC822888) SME00003405 esmbsro2 Sawyeria marylandensis cDNA,... 48 0.60 1
(AE017263) Mesoplasma florum L1 complete genome. 38 0.83 15
(EU258201) Candida albicans strain 10231 sterol regulatory e... 44 1.2 2
(AW335624) S49E7 AGS-1 Pneumocystis carinii cDNA 3', mRNA se... 36 1.7 2
(EV848693) TT1EW03TH Tetrahymena thermophila SB210 cDNA libr... 40 1.8 2
(DT791244) 127402443 TL1 Tribolium castaneum cDNA clone 32K2... 42 1.9 2
(DT779760) 125638760 TH1 Tribolium castaneum cDNA clone 38C2... 42 1.9 2
(DT793107) 126502181 TL1 Tribolium castaneum cDNA clone 20G2... 42 1.9 2
(EJ021256) 1095448004712 Global-Ocean-Sampling_GS-26-01-01-1... 44 1.9 2
(DT786178) 127408001 TL1 Tribolium castaneum cDNA clone 89O2... 42 2.0 2
(DT776146) 126452788 TH1 Tribolium castaneum cDNA clone 106I... 42 2.0 2
(DT790961) 126486373 TL1 Tribolium castaneum cDNA clone 54O7... 42 2.0 2
(DT780384) 125260872 TH1 Tribolium castaneum cDNA clone 59E2... 42 2.0 2
(DT780174) 125630887 TH1 Tribolium castaneum cDNA clone 47G1... 42 2.1 2
(DT792981) 126525628 TL1 Tribolium castaneum cDNA clone 10C3... 42 2.1 2
(DT786204) 127448068 TL1 Tribolium castaneum cDNA clone 98C2... 42 2.1 2
(DT776151) 124719310 TH1 Tribolium castaneum cDNA clone 7O3 ... 42 2.1 2
(DT792589) 127299364 TL1 Tribolium castaneum cDNA clone 121I... 42 2.1 2
(DT782238) 125690997 TH1 Tribolium castaneum cDNA clone 77M3... 42 2.1 2
(DT790586) 126438108 TL1 Tribolium castaneum cDNA clone 55E7... 42 2.1 2
(DT792071) 126479933 TL1 Tribolium castaneum cDNA clone 25O9... 42 2.1 2
(DT786592) 127401518 TL1 Tribolium castaneum cDNA clone 99A7... 42 2.2 2
(DT794216) 127410735 TL1 Tribolium castaneum cDNA clone 114A... 42 2.2 2
(DT782200) 125690964 TH1 Tribolium castaneum cDNA clone 77E3... 42 2.2 2
(AL049185) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 38 2.3 10
(AL161553) Arabidopsis thaliana DNA chromosome 4, contig fra... 46 2.4 1
(AL080282) Arabidopsis thaliana DNA chromosome 4, BAC clone ... 46 2.4 1
(AC174237) Strongylocentrotus purpuratus clone R3-10O15, ***... 46 2.4 1
(ER586450) 1093015877274 Global-Ocean-Sampling_GS-36-01-01-2... 46 2.4 1
(EJ547136) 1092959269317 Global-Ocean-Sampling_GS-29-01-01-1... 46 2.4 1
(EJ495762) 1095403573431 Global-Ocean-Sampling_GS-28-01-01-1... 46 2.4 1
(DD095602) SEQUENCES FOR DETECTION AND IDENTIFICATION OF MET... 38 2.9 3
(AX720645) Sequence 222 from Patent WO02099034. 38 2.9 3
(DD095600) SEQUENCES FOR DETECTION AND IDENTIFICATION OF MET... 38 3.4 3
(AX720643) Sequence 220 from Patent WO02099034. 38 3.4 3
(DT779902) 125645874 TH1 Tribolium castaneum cDNA clone 56I1... 28 3.4 4
(DT775093) 124676306 TH1 Tribolium castaneum cDNA clone 8M13... 28 3.4 4
(DT792240) 127363421 TL1 Tribolium castaneum cDNA clone 123G... 28 3.8 4
(DT795056) 127470290 TL1 Tribolium castaneum cDNA clone 118G... 36 3.8 3
(DD095569) SEQUENCES FOR DETECTION AND IDENTIFICATION OF MET... 38 4.7 3
(AX720612) Sequence 189 from Patent WO02099034. 38 4.7 3
(DA514572) Homo sapiens cDNA clone FEBRA2002399, 5' end, mRN... 36 4.8 2
(AZ268626) RPCI-23-103N20.TJ RPCI-23 Mus musculus genomic cl... 40 5.0 2
(DD095604) SEQUENCES FOR DETECTION AND IDENTIFICATION OF MET... 38 5.6 3
(AX720647) Sequence 224 from Patent WO02099034. 38 5.6 3
(DD095570) SEQUENCES FOR DETECTION AND IDENTIFICATION OF MET... 38 5.7 3
(AX720613) Sequence 190 from Patent WO02099034. 38 5.7 3
(DD095412) SEQUENCES FOR DETECTION AND IDENTIFICATION OF MET... 38 5.8 3
(AX720454) Sequence 31 from Patent WO02099034. 38 5.8 3
(AG610944) Mus musculus molossinus DNA, clone:MSMg01-546A08.... 40 6.2 2
(AG551049) Mus musculus molossinus DNA, clone:MSMg01-467E22.... 40 6.5 2
(DE884367) Macropus eugenii DNA, BAC clone: MEB1-058K16_R, 3... 42 6.7 2
(CT841545) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 6.7 3
(EJ397411) 1093012010582 Global-Ocean-Sampling_GS-28-01-01-1... 34 7.0 2
(DT793817) 127395166 TL1 Tribolium castaneum cDNA clone 113O... 40 7.1 2
(DT790757) 126478132 TL1 Tribolium castaneum cDNA clone 39E1... 40 7.6 2
(DT789872) 126456472 TL1 Tribolium castaneum cDNA clone 56M1... 40 7.7 2
(DD095575) SEQUENCES FOR DETECTION AND IDENTIFICATION OF MET... 38 8.9 3
(AX720618) Sequence 195 from Patent WO02099034. 38 8.9 3
(CU078915) Equus caballus GSS, BAC clone CH241-171P10, SP6 e... 34 9.3 3
(CU468905) Zebrafish DNA sequence from clone DKEY-178O16 in ... 44 9.3 1
(AL731712) Mouse DNA sequence from clone RP23-100M24 on chro... 44 9.3 1
(AC162175) Mus musculus chromosome 7, clone RP23-327E18, com... 44 9.3 1
(EU124734) Solanum lycopersicum chromosome 3 clone C03HBa003... 44 9.3 1
(AY796114) Lycopersicon esculentum clone Le_HBa 153G23 putat... 44 9.3 1
(AC209511) Solanum lycopersicum chromosome 6 clone C06HBa015... 44 9.3 1
(AC182661) Populus trichocarpa clone Pop1-15O12, complete se... 44 9.3 1
(AC160095) Solanum lycopersicum clone BB, complete sequence. 44 9.3 1
(AK116282) Ciona intestinalis cDNA, clone:citb029l08, full i... 44 9.3 1
(AL359762) Human DNA sequence from clone RP11-118B23 on chro... 44 9.3 1
(AC160169) Bos taurus clone CH240-83D1, WORKING DRAFT SEQUEN... 44 9.3 1
(AC133613) Rattus norvegicus clone CH230-169K5, WORKING DRAF... 44 9.3 1
(AC128561) Rattus norvegicus clone CH230-132K10, *** SEQUENC... 44 9.3 1
(AC128213) Rattus norvegicus clone CH230-491E17, *** SEQUENC... 44 9.3 1
(AC126583) Rattus norvegicus clone CH230-123O2, *** SEQUENCI... 44 9.3 1
(AC112529) Rattus norvegicus clone CH230-183K5, *** SEQUENCI... 44 9.3 1
(CU862045) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 9.3 1
(AC027606) Homo sapiens chromosome 1 clone RP11-30M11, WORKI... 44 9.3 1
(AC214720) Pteropus vampyrus clone CH279-366K10, WORKING DRA... 44 9.3 1
(AC170766) Macaca mulatta clone CH250-253A7, WORKING DRAFT S... 44 9.3 1
(AC170420) Macaca mulatta clone CH250-258E2, WORKING DRAFT S... 44 9.3 1
(AC170202) Macaca mulatta clone CH250-102N2, WORKING DRAFT S... 44 9.3 1
(AC170201) Macaca mulatta clone CH250-192I12, WORKING DRAFT ... 44 9.3 1
(AC165578) Bos taurus clone CH240-170K15, WORKING DRAFT SEQU... 44 9.3 1
(BC039201) Homo sapiens, Similar to neuronal thread protein,... 44 9.3 1
(FH715051) CHO_OF5045xp04f1.ab1 CHO_OF5 Nicotiana tabacum ge... 44 9.3 1
(FH666498) CHO_OF5017xo07r1.ab1 CHO_OF5 Nicotiana tabacum ge... 44 9.3 1
(ET937505) CHO_OF435xm18f1.ab1 CHO_OF Nicotiana tabacum geno... 44 9.3 1
>(BJ425232) Dictyostelium discoideum cDNA clone:ddv55e03, 5' end,
single read.
Length = 631
Score = 1251 bits (631), Expect = 0.0
Identities = 631/631 (100%)
Strand = Plus / Plus
Query: 1 aggaaattgggatgaatcaaaagccaccaaattaacctactgcgataatggagattggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggaaattgggatgaatcaaaagccaccaaattaacctactgcgataatggagattggga 60
Query: 61 aactttaattcaatttccagcatcaaacaataaagtagattataaatactttgttatgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aactttaattcaatttccagcatcaaacaataaagtagattataaatactttgttatgga 120
Query: 121 tactaatggtgaaaagatttgggagagtggttcaaaccgtacctttaatttaaatgattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tactaatggtgaaaagatttgggagagtggttcaaaccgtacctttaatttaaatgattt 180
Query: 181 aaattcaaattatattcatgaatttagagatacttatcaaagtccaacatcagctgaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaattcaaattatattcatgaatttagagatacttatcaaagtccaacatcagctgaaaa 240
Query: 241 tacttatttgaattcttcattctttagagaagtactctttggaagagaaaatccaactca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tacttatttgaattcttcattctttagagaagtactctttggaagagaaaatccaactca 300
Query: 301 atattctttaattaaacaaactcaagctgataaagttataattcatttccaagttaaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atattctttaattaaacaaactcaagctgataaagttataattcatttccaagttaaatc 360
Query: 361 aacatatgtaccaccaaatcattcaatttatattgttggtagtaatacacaattaggtaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aacatatgtaccaccaaatcattcaatttatattgttggtagtaatacacaattaggtaa 420
Query: 421 ttggagaacagatagagcagttaaattaagtgatgaaagttatccaatttggaaagttga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttggagaacagatagagcagttaaattaagtgatgaaagttatccaatttggaaagttga 480
Query: 481 tttagagttttcaaaagatcaattaccattctcttataaatatattattgccgataagat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttagagttttcaaaagatcaattaccattctcttataaatatattattgccgataagat 540
Query: 541 taaatcagttgttcattgggaatatggtaatgatagatggttcacagcaagtgccactca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 taaatcagttgttcattgggaatatggtaatgatagatggttcacagcaagtgccactca 600
Query: 601 tgcaagtgaatattcaagtaccaccaatgag 631
|||||||||||||||||||||||||||||||
Sbjct: 601 tgcaagtgaatattcaagtaccaccaatgag 631
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,087,969,438
Number of extensions: 63368998
Number of successful extensions: 5121002
Number of sequences better than 10.0: 121
Length of query: 927
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 903
Effective length of database: 97,308,875,965
Effective search space: 87869914996395
Effective search space used: 87869914996395
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7. 6 |
| Homology vs Protein |
Query= Contig-U13141-1 (Contig-U13141-1Q) /CSM_Contig/Contig-U13141-1Q.Seq.d
(927 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CP000140_3(CP000140|pid:none) Parabacteroides distasonis ATCC 85... 174 3e-42
AY510449_1(AY510449|pid:none) Solanum tuberosum 4-alpha-glucanot... 173 7e-42
FJ664262_1(FJ664262|pid:none) Annona cherimola disproportionatin... 170 6e-41
AP010656_444(AP010656|pid:none) Candidatus Azobacteroides pseudo... 166 8e-40
AY081315_1(AY081315|pid:none) Arabidopsis thaliana 4-alpha-gluca... 161 3e-38
CR626927_3520(CR626927|pid:none) Bacteroides fragilis NCTC 9343,... 159 1e-37
AP006841_3821(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 156 8e-37
CP001577_181(CP001577|pid:none) Micromonas sp. RCC299 chromosome... 133 7e-30
CP000139_1346(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 129 2e-28
CR954211_230(CR954211|pid:none) Ostreococcus tauri strain OTTH05... 118 2e-25
CP000591_215(CP000591|pid:none) Ostreococcus lucimarinus CCE9901... 110 7e-23
AE005176_695(AE005176|pid:none) Lactococcus lactis subsp. lactis... 105 2e-21
CP000425_648(CP000425|pid:none) Lactococcus lactis subsp. cremor... 103 1e-20
AE015924_670(AE015924|pid:none) Porphyromonas gingivalis W83, co... 92 2e-17
CR848038_437(CR848038|pid:none) Chlamydophila abortus strain S26... 74 5e-12
CP000667_2645(CP000667|pid:none) Salinispora tropica CNB-440, co... 72 3e-11
CP000051_89(CP000051|pid:none) Chlamydia trachomatis A/HAR-13, c... 69 2e-10
FM872308_89(FM872308|pid:none) Chlamydia trachomatis JALI20 sero... 69 2e-10
BX908798_745(BX908798|pid:none) Parachlamydia-related symbiont U... 69 3e-10
(O84089) RecName: Full=4-alpha-glucanotransferase; EC=2... 69 3e-10
(Q9PKU9) RecName: Full=4-alpha-glucanotransferase; EC=2... 66 2e-09
AP006861_551(AP006861|pid:none) Chlamydophila felis Fe/C-56 DNA,... 65 4e-09
AM746676_2380(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 64 9e-09
CP000850_2786(CP000850|pid:none) Salinispora arenicola CNS-205, ... 61 6e-08
(P30270) RecName: Full=Alpha-amylase; EC=3.2.1.1; AltNa... 60 1e-07
CP000251_292(CP000251|pid:none) Anaeromyxobacter dehalogenans 2C... 57 9e-07
U22045_1(U22045|pid:none) Bacillus sp. alpha-amylase (Amy) gene,... 57 1e-06
D13068_1(D13068|pid:none) Bacillus sp. KC201 gene for cyclodextr... 55 3e-06
(P31746) RecName: Full=Cyclomaltodextrin glucanotransferase; ... 55 3e-06
AY770575_1(AY770575|pid:none) Bacillus sp. TS1-1 cyclodextrin gl... 55 3e-06
CP001055_375(CP001055|pid:none) Elusimicrobium minutum Pei191, c... 54 6e-06
AJ876899_1(AJ876899|pid:none) Haloferax mediterranei amy gene fo... 54 8e-06
CP000975_937(CP000975|pid:none) Methylacidiphilum infernorum V4,... 54 8e-06
CS340555_1(CS340555|pid:none) Sequence 7 from Patent WO2006066596. 54 1e-05
CS340565_1(CS340565|pid:none) Sequence 17 from Patent WO20060665... 54 1e-05
GM720877_1(GM720877|pid:none) Sequence 12 from Patent WO20081018... 54 1e-05
CS340559_1(CS340559|pid:none) Sequence 11 from Patent WO20060665... 54 1e-05
CS340557_1(CS340557|pid:none) Sequence 9 from Patent WO2006066596. 54 1e-05
CS340561_1(CS340561|pid:none) Sequence 13 from Patent WO20060665... 54 1e-05
(P27036) RecName: Full=Cyclomaltodextrin glucanotransferase; ... 53 1e-05
(P22998) RecName: Full=Alpha-amylase; EC=3.2.1.1; AltNa... 53 1e-05
(P08704) RecName: Full=Cyclomaltodextrin glucanotransferase; ... 53 2e-05
AP009493_5280(AP009493|pid:none) Streptomyces griseus subsp. gri... 51 5e-05
CP000446_2748(CP000446|pid:none) Shewanella sp. MR-4, complete g... 51 6e-05
CP000681_1239(CP000681|pid:none) Shewanella putrefaciens CN-32, ... 50 8e-05
CP001330_104(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 50 1e-04
CP000753_1297(CP000753|pid:none) Shewanella baltica OS185, compl... 50 1e-04
GM712409_1(GM712409|pid:none) Sequence 1 from Patent WO2008092919. 50 1e-04
(O30565) RecName: Full=Cyclomaltodextrin glucanotransferase; ... 50 1e-04
CP001056_2098(CP001056|pid:none) Clostridium botulinum B str. Ek... 49 2e-04
CR555306_3943(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 49 2e-04
GN101278_1(GN101278|pid:none) Sequence 6059 from Patent WO200903... 49 3e-04
AE004439_540(AE004439|pid:none) Pasteurella multocida subsp. mul... 49 3e-04
AY642120_1(AY642120|pid:none) Aspergillus ficuum glucoamylase (g... 48 5e-04
CP000267_2118(CP000267|pid:none) Rhodoferax ferrireducens T118, ... 48 5e-04
CP000891_1349(CP000891|pid:none) Shewanella baltica OS195, compl... 47 0.001
CR954210_49(CR954210|pid:none) Ostreococcus tauri strain OTTH059... 47 0.001
ALBSXF(S26588;S26590;S31284;S31283;S31282)cyclomaltodextrin gluc... 47 0.001
DQ526426_2(DQ526426|pid:none) Ophiostoma floccosum alpha amylase... 46 0.002
GN045998_1(GN045998|pid:none) Sequence 29 from Patent WO20071496... 46 0.002
CS627083_1(CS627083|pid:none) Sequence 33 from Patent WO20050033... 46 0.002
EU974217_1(EU974217|pid:none) Zea mays clone 443128 starch bindi... 46 0.002
AC135421_3(AC135421|pid:none) Oryza sativa (japonica cultivar-gr... 46 0.002
CP001638_650(CP001638|pid:none) Geobacillus sp. WCH70, complete ... 46 0.002
(P69327) RecName: Full=Glucoamylase; EC=3.2.1.3; AltNam... 45 0.003
EU034722_1(EU034722|pid:none) Synthetic construct glucoamylase g... 45 0.003
BT060504_1(BT060504|pid:none) Zea mays full-length cDNA clone ZM... 45 0.003
AY652617_1(AY652617|pid:none) Aspergillus niger strain VanTieghe... 45 0.003
CP001096_4095(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 45 0.003
GN101274_1(GN101274|pid:none) Sequence 6055 from Patent WO200903... 45 0.003
D01035_1(D01035|pid:none) Aspergillus oryzae mRNA for glucoamyla... 45 0.003
AY528665_1(AY528665|pid:none) Synthetic construct histidine-tagg... 45 0.003
(P36914) RecName: Full=Glucoamylase; EC=3.2.1.3; AltNam... 45 0.003
CP000304_3409(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 45 0.003
CP000479_2817(CP000479|pid:none) Mycobacterium avium 104, comple... 45 0.005
AE016958_1500(AE016958|pid:none) Mycobacterium avium subsp. para... 45 0.005
A18991_1(A18991|pid:none) Bacillus 290-3 (DSM 5850) gene for gam... 45 0.005
AC115599_35(AC115599|pid:none) Dictyostelium discoideum chromoso... 45 0.005
CP000282_2930(CP000282|pid:none) Saccharophagus degradans 2-40, ... 45 0.005
CP000472_1251(CP000472|pid:none) Shewanella piezotolerans WP3, c... 45 0.005
EU247508_1(EU247508|pid:none) Gibberella moniliformis putative g... 45 0.005
CP001327_18(CP001327|pid:none) Micromonas sp. RCC299 chromosome ... 44 0.006
FB722556_1(FB722556|pid:none) Sequence 3 from Patent WO2007147835. 44 0.006
GN046004_1(GN046004|pid:none) Sequence 35 from Patent WO20071496... 44 0.006
FB722560_1(FB722560|pid:none) Sequence 7 from Patent WO2007147835. 44 0.006
AB083161_1(AB083161|pid:none) Aspergillus awamori GA I mRNA for ... 44 0.008
AM236086_718(AM236086|pid:none) Rhizobium leguminosarum bv. vici... 44 0.008
CP001341_474(CP001341|pid:none) Arthrobacter chlorophenolicus A6... 44 0.008
(P45176) RecName: Full=4-alpha-glucanotransferase; EC=2... 44 0.008
AM268530_1(AM268530|pid:none) Pseudomonas sp. AM1(2006) g4-amyla... 44 0.008
CS627085_1(CS627085|pid:none) Sequence 35 from Patent WO20050033... 44 0.008
CP000644_697(CP000644|pid:none) Aeromonas salmonicida subsp. sal... 44 0.008
GN046000_1(GN046000|pid:none) Sequence 31 from Patent WO20071496... 44 0.008
CS627055_1(CS627055|pid:none) Sequence 5 from Patent WO200500331... 44 0.008
AX065285_1(AX065285|pid:none) Sequence 411 from Patent WO0100844... 44 0.010
CP000447_2149(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 44 0.010
AX065283_1(AX065283|pid:none) Sequence 409 from Patent WO0100844... 44 0.010
CP000680_3114(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 43 0.013
CP000924_662(CP000924|pid:none) Thermoanaerobacter pseudethanoli... 43 0.013
AP009389_1585(AP009389|pid:none) Pelotomaculum thermopropionicum... 43 0.013
JS0631(JS0631)alpha-amylase (EC 3.2.1.1) precursor - Pseudomonas... 43 0.013
D10769_1(D10769|pid:none) Pseudomonas sp. gene for maltopentaose... 43 0.013
CP000360_1483(CP000360|pid:none) Acidobacteria bacterium Ellin34... 42 0.023
CP000282_984(CP000282|pid:none) Saccharophagus degradans 2-40, c... 42 0.023
CP000462_3505(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 42 0.023
CP000590_49(CP000590|pid:none) Ostreococcus lucimarinus CCE9901 ... 42 0.023
(P30920) RecName: Full=Cyclomaltodextrin glucanotransferase; ... 42 0.023
BX950851_4108(BX950851|pid:none) Erwinia carotovora subsp. atros... 42 0.023
NRL(1CGT) cyclomaltodextrin glucanotransferase (EC 2.4.1.19) - B... 42 0.023
EU247509_1(EU247509|pid:none) Gibberella moniliformis putative g... 42 0.023
NRL(1CGX) Cyclomaltodextrin glucanotransferase (cgtase) (EC 2.4.... 42 0.030
NRL(1CGV) Cyclomaltodextrin glucanotransferase (EC 2.4.1.19) (cg... 42 0.030
CP000138_262(CP000138|pid:none) Rhizobium etli CFN 42 plasmid p4... 42 0.030
PDBN(1CXK)A MOL_ID: 1;MOL_ID: 1; MOLECULE: CYCLODEXTRIN-GLYCOSYL... 42 0.030
NRL(1CGW) Cyclomaltodextrin glucanotransferase (cgtase) (EC 2.4.... 42 0.030
(P30921) RecName: Full=Cyclomaltodextrin glucanotransferase; ... 42 0.030
CP000826_4618(CP000826|pid:none) Serratia proteamaculans 568, co... 42 0.030
AB257584_1(AB257584|pid:none) Brachybacterium sp. LB25 gene for ... 42 0.030
CP001056_2099(CP001056|pid:none) Clostridium botulinum B str. Ek... 42 0.030
NRL(1CGY) Cyclomaltodextrin glucanotransferase (cgtase) (EC 2.4.... 42 0.030
NRL(1CDG) cyclomaltodextrin glucanotransferase (EC 2.4.1.19) - B... 42 0.030
AM933612_1(AM933612|pid:none) Paenibacillus sp. C36 cgt gene for... 42 0.039
AM408590_1817(AM408590|pid:none) Mycobacterium bovis BCG Pasteur... 42 0.039
(P14804) RecName: Full=Glucoamylase; EC=3.2.1.3; AltNam... 42 0.039
CP000325_2558(CP000325|pid:none) Mycobacterium ulcerans Agy99, c... 42 0.039
AM748796_1(AM748796|pid:none) Paenibacillus pabuli cgtase gene f... 42 0.039
(P19584) RecName: Full=Thermophilic beta-amylase; EC=3.... 42 0.039
S36364(S36364;S13710;S13711;S25539)glucan 1,4-alpha-glucosidase ... 41 0.050
CP000283_3464(CP000283|pid:none) Rhodopseudomonas palustris BisB... 41 0.050
X67291_1(X67291|pid:none) N.crassa gla-1 gene for glucan 1,4-alp... 41 0.050
CP000301_3734(CP000301|pid:none) Rhodopseudomonas palustris BisB... 41 0.050
EU305539_1(EU305539|pid:none) Paenibacillus graminis strain MC22... 41 0.050
(P31747) RecName: Full=Cyclomaltodextrin glucanotransferase; ... 41 0.066
CU633453_105(CU633453|pid:none) Podospora anserina genomic DNA c... 41 0.066
CP001344_1115(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 41 0.066
CP000961_3383(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 41 0.066
CT573071_819(CT573071|pid:none) Kuenenia stuttgartiensis genome ... 41 0.066
BX842595_13(BX842595|pid:none) Neurospora crassa DNA linkage gro... 41 0.066
(P17692) RecName: Full=Cyclomaltodextrin glucanotransferase; ... 40 0.086
(P05618) RecName: Full=Cyclomaltodextrin glucanotransferase; ... 40 0.086
(P09121) RecName: Full=Cyclomaltodextrin glucanotransferase; ... 40 0.086
DQ473479_1(DQ473479|pid:none) Thermobifida fusca strain NTU22 al... 40 0.086
AI1827(AI1827) cyclomaltodextrin glucanotransferase [imported] -... 40 0.086
(P13507) RecName: Full=Glucan 1,4-alpha-maltotetraohydrolase; ... 40 0.086
A32803(A32803) glucan 1,4-alpha-maltotetraohydrolase (EC 3.2.1.6... 40 0.086
AF302787_3(AF302787|pid:none) Bacillus circulans putative ferric... 40 0.086
AY478421_1(AY478421|pid:none) Bacillus sp. I-5 CGTase (cgt) gene... 40 0.086
CP000103_1396(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 40 0.11
CP000896_627(CP000896|pid:none) Acholeplasma laidlawii PG-8A, co... 40 0.11
CP001104_357(CP001104|pid:none) Eubacterium eligens ATCC 27750, ... 40 0.11
CP000143_1043(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 c... 40 0.11
CP001150_765(CP001150|pid:none) Rhodobacter sphaeroides KD131 ch... 40 0.11
(P14014) RecName: Full=Cyclomaltodextrin glucanotransferase; ... 40 0.11
CP000573_200(CP000573|pid:none) Burkholderia pseudomallei 1106a ... 40 0.15
CP000085_213(CP000085|pid:none) Burkholderia thailandensis E264 ... 40 0.15
CP000155_3941(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 40 0.15
CP000088_983(CP000088|pid:none) Thermobifida fusca YX, complete ... 40 0.15
BX571966_146(BX571966|pid:none) Burkholderia pseudomallei strain... 40 0.15
CP000125_1656(CP000125|pid:none) Burkholderia pseudomallei 1710b... 40 0.15
EF085922_1(EF085922|pid:none) Picea sitchensis clone WS02724_P21... 40 0.15
AB161945_3(AB161945|pid:none) Arthrobacter globiformis ctsR, cts... 40 0.15
CP001098_1460(CP001098|pid:none) Halothermothrix orenii H 168, c... 39 0.19
CP000901_3421(CP000901|pid:none) Yersinia pestis Angola, complet... 39 0.19
CP000950_161(CP000950|pid:none) Yersinia pseudotuberculosis YPII... 39 0.19
CP000249_1141(CP000249|pid:none) Frankia sp. CcI3, complete geno... 39 0.19
EF545003_1(EF545003|pid:none) Thermomyces lanuginosus glucoamyla... 39 0.25
CP001390_1868(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 39 0.25
AP008971_201(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 39 0.25
AY948384_1(AY948384|pid:none) Thermomyces lanuginosus glucoamyla... 39 0.25
CP001124_1002(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 39 0.25
CP001616_43(CP001616|pid:none) Tolumonas auensis DSM 9187, compl... 39 0.25
CP000661_1761(CP000661|pid:none) Rhodobacter sphaeroides ATCC 17... 39 0.25
S15693(S15693)hypothetical protein (P8A7 5' region) - slime mold... 39 0.25
AC116984_73(AC116984|pid:none) Dictyostelium discoideum chromoso... 39 0.25
AE016825_3490(AE016825|pid:none) Chromobacterium violaceum ATCC ... 39 0.25
CP000820_5198(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 39 0.25
AX700817_1(AX700817|pid:none) Sequence 1 from Patent EP1284293. 39 0.33
BC168443_1(BC168443|pid:none) Xenopus tropicalis cDNA clone MGC:... 39 0.33
CP000384_2854(CP000384|pid:none) Mycobacterium sp. MCS, complete... 39 0.33
CP000511_3126(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 39 0.33
AX356717_1(AX356717|pid:none) Sequence 1 from Patent WO0206508. 39 0.33
(P26827) RecName: Full=Cyclomaltodextrin glucanotransferase; ... 39 0.33
AB082929_1(AB082929|pid:none) Bacillus clarkii cgt gene for cycl... 39 0.33
AB432985_1(AB432985|pid:none) Bacillus clarkii cgt, cda genes fo... 39 0.33
AF497477_1(AF497477|pid:none) Nostoc sp. PCC 9229 cyclomaltodext... 38 0.43
CP000454_2132(CP000454|pid:none) Arthrobacter sp. FB24, complete... 38 0.43
BX248359_29(BX248359|pid:none) Corynebacterium diphtheriae gravi... 38 0.43
CP001034_554(CP001034|pid:none) Natranaerobius thermophilus JW/N... 38 0.43
EU572721_1(EU572721|pid:none) Paenibacillus sp. JB-13 cyclodextr... 38 0.43
EU014874_1(EU014874|pid:none) Cryptococcus flavus alpha-amylase ... 38 0.43
CP001196_3017(CP001196|pid:none) Oligotropha carboxidovorans OM5... 38 0.43
CU468135_3230(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 38 0.56
CP001103_1245(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 38 0.56
AX453023_1(AX453023|pid:none) Sequence 1 from Patent WO0244350. 38 0.56
CP000860_810(CP000860|pid:none) Candidatus Desulforudis audaxvia... 38 0.56
CP000463_3613(CP000463|pid:none) Rhodopseudomonas palustris BisA... 38 0.56
CP000510_2379(CP000510|pid:none) Psychromonas ingrahamii 37, com... 38 0.56
AM746676_4032(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 38 0.56
FM954973_181(FM954973|pid:none) Vibrio splendidus LGP32 chromoso... 37 0.73
AY251462_1(AY251462|pid:none) Bacillus agaradhaerens LS-3C cyclo... 37 0.73
CP000085_933(CP000085|pid:none) Burkholderia thailandensis E264 ... 37 0.73
CP000527_237(CP000527|pid:none) Desulfovibrio vulgaris subsp. vu... 37 0.73
CP000243_3836(CP000243|pid:none) Escherichia coli UTI89, complet... 37 0.73
GN101270_1(GN101270|pid:none) Sequence 6051 from Patent WO200903... 37 0.73
AP006725_4638(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204... 37 0.95
CP000301_3633(CP000301|pid:none) Rhodopseudomonas palustris BisB... 37 0.95
CP000647_3749(CP000647|pid:none) Klebsiella pneumoniae subsp. pn... 37 0.95
AF047363_1(AF047363|pid:none) Paenibacillus macerans alpha-cyclo... 37 1.2
CP000790_127(CP000790|pid:none) Vibrio harveyi ATCC BAA-1116 chr... 37 1.2
(P04830) RecName: Full=Cyclomaltodextrin glucanotransferase; ... 37 1.2
AE014075_4100(AE014075|pid:none) Escherichia coli CFT073, comple... 37 1.2
CP000230_1602(CP000230|pid:none) Rhodospirillum rubrum ATCC 1117... 37 1.2
AC146748_12(AC146748|pid:none) Medicago truncatula clone mth2-65... 37 1.2
EU644086_1(EU644086|pid:none) Bacillus circulans strain DF 9R cy... 37 1.2
CP000822_4703(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 37 1.2
CU651637_3290(CU651637|pid:none) Escherichia coli LF82 chromosom... 37 1.2
CP000361_1172(CP000361|pid:none) Arcobacter butzleri RM4018, com... 37 1.2
CP001327_476(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 36 1.6
CP000239_2080(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, com... 36 1.6
M12777_1(M12777|pid:none) B.mecerans cyclodextrin glucanotransfe... 36 1.6
BX571860_142(BX571860|pid:none) Photorhabdus luminescens subsp. ... 36 1.6
CP000783_4192(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 36 1.6
CP001600_3537(CP001600|pid:none) Edwardsiella ictaluri 93-146, c... 36 1.6
AP009240_3683(AP009240|pid:none) Escherichia coli SE11 DNA, comp... 36 2.1
CP001037_13(CP001037|pid:none) Nostoc punctiforme PCC 73102, com... 36 2.1
FM180568_3661(FM180568|pid:none) Escherichia coli 0127:H6 E2348/... 36 2.1
CP000800_3706(CP000800|pid:none) Escherichia coli E24377A, compl... 36 2.1
CP000613_2067(CP000613|pid:none) Rhodospirillum centenum SW, com... 36 2.1
A86007(A86007) 4-alpha-glucanotransferase (amylomaltase) [import... 36 2.1
B37837(B37837)probable alpha-amylase (EC 3.2.1.1) - Clostridium ... 36 2.1
CR378679_86(CR378679|pid:none) Photobacterium profundum SS9 chro... 36 2.1
EU893953_1(EU893953|pid:none) Escherichia coli strain TB182A 4-a... 36 2.1
M55392_1(M55392|pid:none) Clostridium acetobutylicum alpha-amyla... 36 2.1
CP000266_3177(CP000266|pid:none) Shigella flexneri 5 str. 8401, ... 36 2.1
CP000970_3547(CP000970|pid:none) Escherichia coli SMS-3-5, compl... 36 2.1
CU928164_3870(CU928164|pid:none) Escherichia coli IAI39 chromoso... 36 2.1
EU893950_1(EU893950|pid:none) Escherichia coli strain 493/89 4-a... 36 2.1
CU928158_3269(CU928158|pid:none) Escherichia fergusonii ATCC 354... 36 2.1
CP000562_1052(CP000562|pid:none) Methanoculleus marisnigri JR1, ... 36 2.1
(P15977) RecName: Full=4-alpha-glucanotransferase; EC=2... 36 2.1
CP001120_3569(CP001120|pid:none) Salmonella enterica subsp. ente... 35 2.8
CP001138_3458(CP001138|pid:none) Salmonella enterica subsp. ente... 35 2.8
FM178380_39(FM178380|pid:none) Aliivibrio salmonicida LFI1238 ch... 35 2.8
CP001113_3537(CP001113|pid:none) Salmonella enterica subsp. ente... 35 2.8
CP000886_4245(CP000886|pid:none) Salmonella enterica subsp. ente... 35 2.8
CP000857_3471(CP000857|pid:none) Salmonella enterica subsp. ente... 35 2.8
BA000045_373(BA000045|pid:none) Gloeobacter violaceus PCC 7421 D... 35 2.8
AK107570_1(AK107570|pid:none) Oryza sativa Japonica Group cDNA c... 35 2.8
CP001127_3447(CP001127|pid:none) Salmonella enterica subsp. ente... 35 2.8
CP001601_1811(CP001601|pid:none) Corynebacterium aurimucosum ATC... 35 2.8
AE014613_3718(AE014613|pid:none) Salmonella enterica subsp. ente... 35 2.8
Y18523_13(Y18523|pid:none) Actinoplanes sp. SE50/110 complete ac... 35 3.6
AY145471_103(AY145471|pid:none) Rachiplusia ou multiple nucleopo... 35 3.6
CP001133_927(CP001133|pid:none) Vibrio fischeri MJ11 chromosome ... 35 3.6
CP000653_3794(CP000653|pid:none) Enterobacter sp. 638, complete ... 35 4.7
AB181234_3(AB181234|pid:none) Streptococcus oralis genes for hyp... 35 4.7
AM114193_1137(AM114193|pid:none) Uncultured methanogenic archaeo... 34 6.2
AY530017_2(AY530017|pid:none) Vibrio vulnificus malPQ operon, co... 34 6.2
(P19531) RecName: Full=Maltogenic alpha-amylase; EC=3.2... 34 6.2
CR940353_151(CR940353|pid:none) Theileria annulata strain Ankara... 34 6.2
AJ937541_1(AJ937541|pid:none) Guillardia theta mRNA for starch b... 34 6.2
M36539_1(M36539|pid:none) B.stearothermophilus maltogenic alpha-... 34 6.2
(Q03045) RecName: Full=Glucoamylase P; EC=3.2.1.3; AltN... 34 6.2
AM409314_7(AM409314|pid:none) Streptomyces glaucescens ORF1 (par... 34 8.0
CP001614_823(CP001614|pid:none) Teredinibacter turnerae T7901, c... 34 8.0
AL034557_45(AL034557|pid:none) Plasmodium falciparum MAL4P1. &A... 34 8.0
AC116984_95(AC116984|pid:none) Dictyostelium discoideum chromoso... 34 8.0
CU466930_993(CU466930|pid:none) Candidatus Cloacamonas acidamino... 34 8.0
AB019236_8(AB019236|pid:none) Arabidopsis thaliana genomic DNA, ... 34 8.0
FJ556418_1(FJ556418|pid:none) Plasmodium falciparum isolate 822 ... 34 8.0
AF041848_1(AF041848|pid:none) Spinacia oleracea fructose-6-phosp... 34 8.0
CP000388_1624(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 34 8.0
>CP000140_3(CP000140|pid:none) Parabacteroides distasonis ATCC 8503,
complete genome.
Length = 895
Score = 174 bits (442), Expect = 3e-42
Identities = 97/308 (31%), Positives = 171/308 (55%), Gaps = 2/308 (0%)
Frame = +2
Query: 2 GNWDESKATKLTYCDNGDWETLIQFPASNNKVDYKYFVMDTNGEKIWESGS-NRTFNLND 178
G+W+ + A ++ Y +G+W+ + P ++Y+YF + N ++I+E N L+
Sbjct: 27 GSWEPALAKEMNYSGDGNWKLELDLPPDIKDIEYRYF-LSVNDKQIFEEWEKNHRIVLDG 85
Query: 179 LNSNYIHEFRDTYQSPTSAENTYLNSSFFREVLFGRENPTQYSLIKQTQADKVIIHFQVK 358
+ +YI D +Q +N SS F + LF T +++ + K++I ++
Sbjct: 86 QSDSYI--LYDYWQ--IRPDNLAFYSSAFTKSLFAHPCNTHERVVRSGR--KLVI--KIS 137
Query: 359 STYVPPNHSIYIVGSNTQLGNWRTDRAVKLSDESYPIWKVDLEFSKDQLPFSYKYIIADK 538
+ V N + I G+ LGNW D+A+ LS +++P W +DL+ ++ + P YK+++ D
Sbjct: 138 APRVEKNQCVAITGNQECLGNWHPDKALLLSCDTFPEWHIDLDAAEIRYPLEYKFLVWDN 197
Query: 539 -IKSVVHWEYGNDRWFTASATHASEYSSTTNEDRDFFFNDGEFKDSQLLRSAGVAVPIFS 715
+ ++WE +R + E T +F D L R AG +P+FS
Sbjct: 198 DSRQPLYWESDENRILSLVPQKQGE----TVVISGLYFRDS----LPLWRCAGSVIPVFS 249
Query: 716 LRSKQGLGIGEFNDLHQLVDWSHQSGLHMIQILPINDTTVYYTWRDSYPYSSVSVYALHP 895
LRS++ G+G+ DLH LVDW+ ++ +IQ+LP+NDTT+ +TW DSYPYS++S+YALHP
Sbjct: 250 LRSEKSFGVGDLGDLHMLVDWARKTHQRIIQVLPMNDTTMTHTWVDSYPYSAISIYALHP 309
Query: 896 IYIHIDSI 919
+Y+ + ++
Sbjct: 310 MYVDLSAL 317
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,541,775,842
Number of extensions: 32306650
Number of successful extensions: 73024
Number of sequences better than 10.0: 272
Number of HSP's gapped: 72895
Number of HSP's successfully gapped: 321
Length of query: 309
Length of database: 1,051,180,864
Length adjustment: 128
Effective length of query: 181
Effective length of database: 636,901,312
Effective search space: 115279137472
Effective search space used: 115279137472
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
4 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
1 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |