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Dicty_cDB
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Dicty_cDB
Contig List | Clone List | cDNA Library List
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Contig-U13016-1
Contig ID Contig-U13016-1
Contig update 2002.12.18
Contig sequence 
>Contig-U13016-1 (Contig-U13016-1Q) /CSM_Contig/Contig-U13016-1Q.Seq.d
NNNNNNNNNNANGTCNAGNTGGNATTTGTAAGAATGCNACTGCNACTGAA
NAAGGNACTTGNGAGTNTGNTGATTTNGATCCNAAACCNTTCNTTTGTAA
AACTGCNGCTGNTGTTTCNGTTGGNGTTGCTGTTGGNGNTGCTGTTGGTG
GGGCNATTGCNCTTGGNGTNTTTATTTTTGNNGGNAANAAAGGTTATGAC
TTNTGGAAANCNAGTCAAGGNGNTNCNATGGCCCCNTCNAATGCCNATCC
CCTTTA
Gap no gap
Contig length 256
Chromosome number (1..6, M) -
Chromosome length -
Start point -
End point -
Strand (PLUS/MINUS) -
Number of clones 1
Number of EST 1
Link to clone list U13016
List of clone(s) 

est1=CHI493Z,1,247
Translated Amino Acid sequence 
XXXXVXXXFVRMXLXLXKXLXSXXIXIXNXSFVKLXLXFXLXLLLXXLLVGXLXLXXLFL
XXXKVMTXGXXVKXXXWPXXMPIPF
Translated Amino Acid sequence (All Frames) 
Frame A:
XXXXVXXXFVRMXLXLXKXLXSXXIXIXNXSFVKLXLXFXLXLLLXXLLVGXLXLXXLFL
XXXKVMTXGXXVKXXXWPXXMPIPF


Frame B:
xxxxsxwxl*ecxcx*xrxlxvx*fxsxtxxl*ncxxcfxwxccwxccwwgxcxwxxyfx
xxxrl*lxexxsrxxxgpxxcxspl


Frame C:
xxxxxxgicknatatexgtxexxdxdpkpfxcktaaxvsvgvavgxavggaialgvfifx
gxkgydxwkxsqgxxmapsnaxpl
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U13016-1 (Contig-U13016-1Q)
/CSM_Contig/Contig-U13016-1Q.Seq.d
         (256 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U13016-1 (Contig-U13016-1Q) /CSM_Contig/Conti...   258  3e-69
Contig-U12768-1 (Contig-U12768-1Q) /CSM_Contig/Conti...   129  2e-30
Contig-U13159-1 (Contig-U13159-1Q) /CSM_Contig/Conti...   125  2e-29
Contig-U12668-1 (Contig-U12668-1Q) /CSM_Contig/Conti...    94  9e-20
Contig-U14290-1 (Contig-U14290-1Q) /CSM_Contig/Conti...    84  8e-17
Contig-U14373-1 (Contig-U14373-1Q) /CSM_Contig/Conti...    82  3e-16
Contig-U14013-1 (Contig-U14013-1Q) /CSM_Contig/Conti...    68  5e-12
Contig-U11807-1 (Contig-U11807-1Q) /CSM_Contig/Conti...    32  0.27
Contig-U13898-1 (Contig-U13898-1Q) /CSM_Contig/Conti...    28  4.2

>Contig-U13016-1 (Contig-U13016-1Q) /CSM_Contig/Contig-U13016-1Q.Seq.d
          Length = 256

 Score =  258 bits (130), Expect = 3e-69
 Identities = 244/244 (100%)
 Strand = Plus / Plus

                                                                       
Query: 13  gtcnagntggnatttgtaagaatgcnactgcnactgaanaaggnacttgngagtntgntg 72
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13  gtcnagntggnatttgtaagaatgcnactgcnactgaanaaggnacttgngagtntgntg 72

                                                                       
Query: 73  atttngatccnaaaccnttcntttgtaaaactgcngctgntgtttcngttggngttgctg 132
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73  atttngatccnaaaccnttcntttgtaaaactgcngctgntgtttcngttggngttgctg 132

                                                                       
Query: 133 ttggngntgctgttggtggggcnattgcncttggngtntttatttttgnnggnaanaaag 192
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ttggngntgctgttggtggggcnattgcncttggngtntttatttttgnnggnaanaaag 192

                                                                       
Query: 193 gttatgacttntggaaancnagtcaaggngntncnatggccccntcnaatgccnatcccc 252
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gttatgacttntggaaancnagtcaaggngntncnatggccccntcnaatgccnatcccc 252

               
Query: 253 ttta 256
           ||||
Sbjct: 253 ttta 256


>Contig-U12768-1 (Contig-U12768-1Q) /CSM_Contig/Contig-U12768-1Q.Seq.d
          Length = 300

 Score =  129 bits (65), Expect = 2e-30
 Identities = 165/186 (88%)
 Strand = Plus / Plus

                                                                       
Query: 71  tgatttngatccnaaaccnttcntttgtaaaactgcngctgntgtttcngttggngttgc 130
           ||||||||||||||||||||| ||||| |||||||  ||||||||||| |||||||||||
Sbjct: 17  tgatttngatccnaaaccnttnntttgnaaaactgntgctgntgtttcagttggngttgc 76

                                                                       
Query: 131 tgttggngntgctgttggtggggcnattgcncttggngtntttatttttgnnggnaanaa 190
           ||||||||||||||||||||| |||| |||||||||||||||||||||||| || || ||
Sbjct: 77  tgttggngntgctgttggtggngcnantgcncttggngtntttatttttgntggtaaaaa 136

                                                                       
Query: 191 aggttatgacttntggaaancnagtcaaggngntncnatggccccntcnaatgccnatcc 250
           ||||| || ||  ||||||||||||||||||| ||||| |||| | |  || ||||||||
Sbjct: 137 aggttntgnctactggaaancnagtcaaggngttncnanggccncatnaaangccnatcc 196

                 
Query: 251 ccttta 256
           ||||||
Sbjct: 197 ccttta 202


>Contig-U13159-1 (Contig-U13159-1Q) /CSM_Contig/Contig-U13159-1Q.Seq.d
          Length = 268

 Score =  125 bits (63), Expect = 2e-29
 Identities = 179/205 (87%)
 Strand = Plus / Plus

                                                                       
Query: 52  aaggnacttgngagtntgntgatttngatccnaaaccnttcntttgtaaaactgcngctg 111
           |||| |||||||||| |||||||||||||||||||||||| ||||| |||||||  ||||
Sbjct: 16  aagggacttgngagtttgntgatttngatccnaaaccnttnntttgnaaaactgntgctg 75

                                                                       
Query: 112 ntgtttcngttggngttgctgttggngntgctgttggtggggcnattgcncttggngtnt 171
           |||||||  |||||| ||||||||||||||||||||| ||||||| ||||||||| ||||
Sbjct: 76  ntgtttcanttggngntgctgttggngntgctgttggnggggcnantgcncttggggtnt 135

                                                                       
Query: 172 ttatttttgnnggnaanaaaggttatgacttntggaaancnagtcaaggngntncnatgg 231
           ||| |||||  ||||| ||||||| || ||  |||||||| |||||||||||||||| ||
Sbjct: 136 ttanttttggtggnaaaaaaggttntgnctactggaaancaagtcaaggngntncnangg 195

                                    
Query: 232 ccccntcnaatgccnatccccttta 256
           || |||  || ||||||||||||||
Sbjct: 196 ccncntnaaangccnatccccttta 220


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 182
Number of Sequences: 6905
Number of extensions: 182
Number of successful extensions: 46
Number of sequences better than 10.0: 11
length of query: 256
length of database: 5,674,871
effective HSP length: 15
effective length of query: 241
effective length of database: 5,571,296
effective search space: 1342682336
effective search space used: 1342682336
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2008.12. 5
Homology vs DNA 
Query= Contig-U13016-1 (Contig-U13016-1Q) /CSM_Contig/Contig-U13016-1Q.Seq.d
         (256 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ380657) Dictyostelium discoideum cDNA clone:ddc38j24, 3' ...   115   7e-38  2
(BJ383020) Dictyostelium discoideum cDNA clone:ddc46i14, 3' ...   109   4e-34  2
(BJ357516) Dictyostelium discoideum cDNA clone:dda63e22, 3' ...   115   6e-34  2
(BJ353617) Dictyostelium discoideum cDNA clone:dda50j20, 3' ...   115   3e-32  2
(BJ355132) Dictyostelium discoideum cDNA clone:dda55i19, 3' ...   109   4e-32  2
(BJ349933) Dictyostelium discoideum cDNA clone:dda38j05, 3' ...   109   4e-32  2
(BJ347982) Dictyostelium discoideum cDNA clone:dda31f23, 3' ...   109   1e-31  2
(BJ380506) Dictyostelium discoideum cDNA clone:ddc38k12, 3' ...   115   1e-31  2
(BJ351690) Dictyostelium discoideum cDNA clone:dda44e12, 3' ...   109   1e-31  2
(BJ356719) Dictyostelium discoideum cDNA clone:dda61a12, 3' ...   115   1e-31  2
(BJ349833) Dictyostelium discoideum cDNA clone:dda37e21, 3' ...   109   1e-31  2
(BJ348266) Dictyostelium discoideum cDNA clone:dda32o13, 3' ...   115   1e-31  2
(BJ354513) Dictyostelium discoideum cDNA clone:dda53i23, 3' ...   109   1e-31  2
(BJ354405) Dictyostelium discoideum cDNA clone:dda53c15, 3' ...   109   1e-31  2
(BJ349662) Dictyostelium discoideum cDNA clone:dda37b07, 3' ...   109   1e-31  2
(BJ355227) Dictyostelium discoideum cDNA clone:dda56k02, 3' ...   115   1e-31  2
(BJ358089) Dictyostelium discoideum cDNA clone:dda65p16, 3' ...   115   1e-31  2
(BJ348147) Dictyostelium discoideum cDNA clone:dda32g10, 3' ...   115   1e-31  2
(BJ354993) Dictyostelium discoideum cDNA clone:dda55l07, 3' ...   109   1e-31  2
(BJ382149) Dictyostelium discoideum cDNA clone:ddc43f02, 3' ...   115   3e-31  2
(BJ351473) Dictyostelium discoideum cDNA clone:dda43h14, 3' ...   107   4e-31  2
(BJ353418) Dictyostelium discoideum cDNA clone:dda50i05, 3' ...   115   4e-31  2
(BJ354745) Dictyostelium discoideum cDNA clone:dda54i16, 3' ...   115   4e-31  2
(BJ349217) Dictyostelium discoideum cDNA clone:dda35d19, 3' ...   107   4e-31  2
(BJ348967) Dictyostelium discoideum cDNA clone:dda34o19, 3' ...   115   5e-31  2
(BJ385300) Dictyostelium discoideum cDNA clone:ddc54b13, 3' ...   115   5e-31  2
(BJ345505) Dictyostelium discoideum cDNA clone:dda23l20, 3' ...   115   5e-31  2
(BJ401899) Dictyostelium discoideum cDNA clone:dds19c22, 3' ...   115   6e-31  2
(BJ349444) Dictyostelium discoideum cDNA clone:dda36c16, 3' ...   115   6e-31  2
(BJ349255) Dictyostelium discoideum cDNA clone:dda35l20, 3' ...   115   6e-31  2
(BJ382480) Dictyostelium discoideum cDNA clone:ddc44j24, 3' ...   115   6e-31  2
(BJ378370) Dictyostelium discoideum cDNA clone:ddc31p15, 3' ...   115   6e-31  2
(BJ355236) Dictyostelium discoideum cDNA clone:dda56l05, 3' ...   115   6e-31  2
(BJ354500) Dictyostelium discoideum cDNA clone:dda53g19, 3' ...   115   6e-31  2
(BJ357502) Dictyostelium discoideum cDNA clone:dda63b23, 3' ...   115   6e-31  2
(BJ354763) Dictyostelium discoideum cDNA clone:dda54m14, 3' ...   115   6e-31  2
(BJ342509) Dictyostelium discoideum cDNA clone:dda14i11, 3' ...   115   6e-31  2
(BJ353127) Dictyostelium discoideum cDNA clone:dda49g02, 3' ...   115   6e-31  2
(BJ350992) Dictyostelium discoideum cDNA clone:dda41m14, 3' ...   115   6e-31  2
(BJ346071) Dictyostelium discoideum cDNA clone:dda29c02, 3' ...   115   6e-31  2
(BJ354671) Dictyostelium discoideum cDNA clone:dda54j12, 3' ...   115   6e-31  2
(BJ356042) Dictyostelium discoideum cDNA clone:dda59e05, 3' ...   115   6e-31  2
(BJ380435) Dictyostelium discoideum cDNA clone:ddc38l02, 3' ...   115   6e-31  2
(AU033699) Dictyostelium discoideum slug cDNA, clone SLB330.      115   1e-30  2
(AU039490) Dictyostelium discoideum slug cDNA, clone SLH882.      115   2e-30  2
(BJ404510) Dictyostelium discoideum cDNA clone:dds28c20, 3' ...   115   2e-30  2
(BJ331185) Dictyostelium discoideum cDNA clone:dda34a09, 5' ...   115   2e-30  2
(BJ351867) Dictyostelium discoideum cDNA clone:dda44i23, 3' ...   115   2e-30  2
(BJ357184) Dictyostelium discoideum cDNA clone:dda62a19, 3' ...   115   2e-30  2
(BJ351475) Dictyostelium discoideum cDNA clone:dda43h17, 3' ...   115   2e-30  2
(AU038832) Dictyostelium discoideum slug cDNA, clone SSL537.      115   2e-30  2
(AU052790) Dictyostelium discoideum slug cDNA, clone SLF104.      115   2e-30  2
(BJ383031) Dictyostelium discoideum cDNA clone:ddc46l13, 3' ...   115   2e-30  2
(BJ350861) Dictyostelium discoideum cDNA clone:dda41b12, 3' ...   109   2e-30  2
(BJ350891) Dictyostelium discoideum cDNA clone:dda41h11, 3' ...   109   2e-30  2
(BJ348878) Dictyostelium discoideum cDNA clone:dda34l18, 3' ...   103   2e-30  2
(BJ383216) Dictyostelium discoideum cDNA clone:ddc52c08, 3' ...   115   2e-30  2
(BJ353080) Dictyostelium discoideum cDNA clone:dda48m19, 3' ...   115   2e-30  2
(C93110) Dictyostelium discoideum slug cDNA, clone SSM566.        115   2e-30  2
(BJ353939) Dictyostelium discoideum cDNA clone:dda52a02, 3' ...   115   2e-30  2
(BJ356317) Dictyostelium discoideum cDNA clone:dda59n22, 3' ...   115   2e-30  2
(BJ355105) Dictyostelium discoideum cDNA clone:dda55c22, 3' ...   115   2e-30  2
(BJ348755) Dictyostelium discoideum cDNA clone:dda34c08, 3' ...   115   2e-30  2
(BJ352373) Dictyostelium discoideum cDNA clone:dda46e14, 3' ...   115   2e-30  2
(BJ352099) Dictyostelium discoideum cDNA clone:dda45j15, 3' ...   115   2e-30  2
(C90537) Dictyostelium discoideum slug cDNA, clone SSI690.        115   2e-30  2
(AU034792) Dictyostelium discoideum slug cDNA, clone SLE336.      115   2e-30  2
(C90536) Dictyostelium discoideum slug cDNA, clone SSI689.        115   2e-30  2
(AU033416) Dictyostelium discoideum slug cDNA, clone SLA743.      115   2e-30  2
(AU033415) Dictyostelium discoideum slug cDNA, clone SLA742.      115   2e-30  2
(BJ348198) Dictyostelium discoideum cDNA clone:dda32a17, 3' ...   115   2e-30  2
(C94367) Dictyostelium discoideum slug cDNA, clone SSK891.        115   2e-30  2
(AU034939) Dictyostelium discoideum slug cDNA, clone SLE370.      115   2e-30  2
(BJ354400) Dictyostelium discoideum cDNA clone:dda53b15, 3' ...   115   2e-30  2
(BJ350031) Dictyostelium discoideum cDNA clone:dda38p07, 3' ...   115   3e-30  2
(BJ349951) Dictyostelium discoideum cDNA clone:dda38n03, 3' ...   115   3e-30  2
(BJ398435) Dictyostelium discoideum cDNA clone:dds12n12, 3' ...   103   5e-30  2
(BJ354200) Dictyostelium discoideum cDNA clone:dda52j22, 3' ...   109   6e-30  2
(BJ351505) Dictyostelium discoideum cDNA clone:dda43o14, 3' ...   109   6e-30  2
(BJ344622) Dictyostelium discoideum cDNA clone:dda19n24, 3' ...   103   7e-30  2
(BJ384139) Dictyostelium discoideum cDNA clone:ddc48k11, 3' ...   101   7e-30  2
(BJ401594) Dictyostelium discoideum cDNA clone:dds23d23, 3' ...   103   8e-30  2
(BJ350202) Dictyostelium discoideum cDNA clone:dda39g05, 3' ...   109   8e-30  2
(BJ348661) Dictyostelium discoideum cDNA clone:dda33n20, 3' ...   103   8e-30  2
(BJ355449) Dictyostelium discoideum cDNA clone:dda57j06, 3' ...   101   8e-30  2
(BJ353764) Dictyostelium discoideum cDNA clone:dda51i07, 3' ...   109   8e-30  2
(BJ348483) Dictyostelium discoideum cDNA clone:dda33j11, 3' ...   107   8e-30  2
(BJ356617) Dictyostelium discoideum cDNA clone:dda60k20, 3' ...   101   9e-30  2
(BJ357269) Dictyostelium discoideum cDNA clone:dda63a06, 3' ...   103   9e-30  2
(BJ351296) Dictyostelium discoideum cDNA clone:dda42o18, 3' ...   109   9e-30  2
(BJ353723) Dictyostelium discoideum cDNA clone:dda51p03, 3' ...   109   9e-30  2
(BJ404578) Dictyostelium discoideum cDNA clone:dds29a02, 3' ...   101   2e-29  2
(BJ381587) Dictyostelium discoideum cDNA clone:ddc42b03, 3' ...   101   2e-29  2
(BJ353988) Dictyostelium discoideum cDNA clone:dda52l01, 3' ...   107   2e-29  2
(BJ350062) Dictyostelium discoideum cDNA clone:dda38g16, 3' ...   109   3e-29  2
(BJ351927) Dictyostelium discoideum cDNA clone:dda45e05, 3' ...   109   3e-29  2
(BJ354852) Dictyostelium discoideum cDNA clone:dda54p23, 3' ...   107   3e-29  2
(BJ357106) Dictyostelium discoideum cDNA clone:dda62p11, 3' ...   109   3e-29  2
(BJ402751) Dictyostelium discoideum cDNA clone:dds17l22, 3' ...   107   3e-29  2
(BJ349050) Dictyostelium discoideum cDNA clone:dda35p06, 3' ...   101   3e-29  2

>(BJ380657) Dictyostelium discoideum cDNA clone:ddc38j24, 3' end,
           single read.
          Length = 247

 Score =  115 bits (58), Expect(2) = 7e-38
 Identities = 106/106 (100%)
 Strand = Plus / Minus


Query: 13  gtcnagntggnatttgtaagaatgcnactgcnactgaanaaggnacttgngagtntgntg 72
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gtcnagntggnatttgtaagaatgcnactgcnactgaanaaggnacttgngagtntgntg 186


Query: 73  atttngatccnaaaccnttcntttgtaaaactgcngctgntgtttc 118
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 atttngatccnaaaccnttcntttgtaaaactgcngctgntgtttc 140

 Score = 75.8 bits (38), Expect(2) = 7e-38
 Identities = 68/68 (100%)
 Strand = Plus / Minus


Query: 189 aaaggttatgacttntggaaancnagtcaaggngntncnatggccccntcnaatgccnat 248
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaaggttatgacttntggaaancnagtcaaggngntncnatggccccntcnaatgccnat 10


Query: 249 ccccttta 256
           ||||||||
Sbjct: 9   ccccttta 2

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 26,337,548
Number of extensions: 1304602
Number of successful extensions: 25496
Number of sequences better than 10.0: 233
Length of query: 256
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 233
Effective length of database: 93,106,754,628
Effective search space: 21693873828324
Effective search space used: 21693873828324
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
protein update 2009. 7. 5
Homology vs Protein 
Query= Contig-U13016-1 (Contig-U13016-1Q) /CSM_Contig/Contig-U13016-1Q.Seq.d
         (256 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q94494) RecName: Full=Protein psiH; Flags: Precursor;  &U67940_...    59   7e-08
(Q86HT1) RecName: Full=Protein psiL; Flags: Precursor;  &AC11695...    54   2e-06
(Q54VS2) RecName: Full=Protein psiP; Flags: Precursor;                 54   2e-06
(Q54P69) RecName: Full=Protein psiM; Flags: Precursor;                 52   5e-06
(Q557E9) RecName: Full=Protein psiG; Flags: Precursor;  &AC11568...    51   1e-05

>(Q94494) RecName: Full=Protein psiH; Flags: Precursor;
           &U67940_1(U67940|pid:none)
          Length = 715

 Score = 58.5 bits (140), Expect = 7e-08
 Identities = 29/78 (37%), Positives = 36/78 (46%)
 Frame = +3

Query: 21  GICKNATATEXGTXEXXDXDPKPFXCKTXXXXXXXXXXXXXXXXXXXXXXFIFXGXKGYD 200
           G+C N TATE G  +  D DP PF CKT                      FI+ G +GYD
Sbjct: 618 GVCVNNTATEEGYCKSEDYDPLPFICKTGAVVSTAVIAGVTVAGAVALGVFIYGGKRGYD 677

Query: 201 XWKXSQGXXMAPSNAXPL 254
            WK S+    + SN+ PL
Sbjct: 678 YWKESRNVQFSGSNSNPL 695

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 138,458,268
Number of extensions: 3789092
Number of successful extensions: 2926
Number of sequences better than 10.0: 5
Number of HSP's gapped: 2850
Number of HSP's successfully gapped: 5
Length of query: 85
Length of database: 1,051,180,864
Length adjustment: 55
Effective length of query: 30
Effective length of database: 873,170,119
Effective search space: 26195103570
Effective search space used: 26195103570
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 27 (15.0 bits)
PSORT 

 psg: 0.76  gvh: 0.71  alm: 0.29  top: 0.60  tms: 0.07  mit: 0.43  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.20  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 1.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 44.0 %: nuclear
	 28.0 %: cytoplasmic
	 12.0 %: mitochondrial
	  8.0 %: Golgi
	  4.0 %: plasma membrane
	  4.0 %: vesicles of secretory system

>> prediction for Contig-U13016-1 is nuc
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0