Contig-U02024-1 |
Contig ID |
Contig-U02024-1 |
Contig update |
2001. 8.29 |
Contig sequence |
|
Gap |
gap included |
Contig length |
1025 |
Chromosome number (1..6, M) |
4 |
Chromosome length |
5430582 |
Start point |
2810374 |
End point |
2809347 |
Strand (PLUS/MINUS) |
MINUS |
Number of clones |
3 |
Number of EST |
4 |
Link to clone list |
U02024 |
List of clone(s) |
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6. 9 |
Homology vs CSM-cDNA |
|
dna update |
2009. 5.13 |
Homology vs DNA |
Query= Contig-U02024-1 (Contig-U02024-1Q) /CSM_Contig/Contig-U02024-1Q.Seq.d (1035 letters)
Database: ddbj_A 102,105,510 sequences; 101,790,757,118 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(C90555) Dictyostelium discoideum slug cDNA, clone SSI718. 1277 0.0 1 (AU037811) Dictyostelium discoideum slug cDNA, clone SSE324. 771 0.0 2 (C93249) Dictyostelium discoideum slug cDNA, clone SSM874. 472 e-128 1 (AU075072) Dictyostelium discoideum slug cDNA, clone SSM874. 119 6e-29 2 (AE014821) Plasmodium falciparum 3D7 chromosome 14 section 6... 42 7e-04 12 (CR848025) Zebrafish DNA sequence from clone DKEY-202L22. 58 7e-04 1 (AL748258) Danio rerio genomic clone DKEY-7K16, genomic surv... 58 7e-04 1 (AE014824) Plasmodium falciparum 3D7 chromosome 14 section 9... 52 0.004 9 (AL929353) Plasmodium falciparum strain 3D7, chromosome 5, s... 34 0.024 13 (BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 36 0.026 17 (CU656025) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 52 0.044 1 (AE014843) Plasmodium falciparum 3D7 chromosome 11 section 8... 38 0.088 11 (AE001378) Plasmodium falciparum 3D7 chromosome 2 section 15... 34 0.11 5 (AY229987) Cryptophlebia leucotreta granulovirus isolate CV3... 46 0.12 4 (AB125360) Zostera asiatica chloroplast gene for maturase, c... 44 0.13 2 (AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 34 0.13 11 (AB331296) Brasenia schreberi chloroplast rpl2, trnH, psbA g... 50 0.17 1 (AC142594) Macaca mulatta clone CH250-272A22, WORKING DRAFT ... 50 0.17 1 (CL557118) OB__Ba0009I14.f OB__Ba Oryza brachyantha genomic ... 50 0.17 1 (AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2... 30 0.29 13 (AC026654) Homo sapiens chromosome 1 clone RP11-240M13, WORK... 40 0.33 5 (AL137072) Human DNA sequence from clone RP11-29B11 on chrom... 40 0.36 4 (AC096149) Rattus norvegicus clone CH230-10H16, *** SEQUENCI... 36 0.37 2 (AC117019) Rattus norvegicus clone CH230-14E5, WORKING DRAFT... 36 0.37 2 (AC135810) Rattus norvegicus clone CH230-168P6, WORKING DRAF... 36 0.38 2 (AE014849) Plasmodium falciparum 3D7 chromosome 12, section ... 40 0.38 10 (AL035476) Plasmodium falciparum MAL4P3. 34 0.49 14 (BH300392) CH230-84M14.TV CHORI-230 Segment 1 Rattus norvegi... 36 0.49 2 (AL355853) Human DNA sequence from clone RP11-36B21 on chrom... 38 0.55 6 (CU467867) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 40 0.59 5 (CZ541877) SRAA-aad40g12.g1 Strongyloides ratti whole genome... 44 0.64 2 (CZ542055) SRAA-aad41g12.g1 Strongyloides ratti whole genome... 44 0.65 2 (AC166982) Mus musculus chromosome 18, clone RP24-377P23, co... 48 0.68 1 (AC121524) Mus musculus chromosome 18, clone RP24-342F19, co... 48 0.68 1 (AP008210) Oryza sativa (japonica cultivar-group) genomic DN... 48 0.68 1 (AL732332) Oryza sativa genomic DNA, chromosome 4, BAC clone... 48 0.68 1 (AL731607) Oryza sativa genomic DNA, chromosome 4, BAC clone... 48 0.68 1 (AL606454) Oryza sativa genomic DNA, chromosome 4, BAC clone... 48 0.68 1 (AL442112) Oryza sativa genomic DNA, chromosome 4, BAC clone... 48 0.68 1 (AL844509) Plasmodium falciparum chromosome 13. 48 0.68 1 (AL049184) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 48 0.68 1 (AC213874) Zea mays chromosome 3 clone ZMMBBb-330L20; ZMMBBb... 48 0.68 1 (CC280273) CH261-24J8_RM1.1 CH261 Gallus gallus genomic clon... 48 0.68 1 (AY689436) Deerpox virus W-848-83, complete genome. 36 0.68 9 (AC010218) Homo sapiens chromosome 5 clone CTC-214C18, compl... 44 0.76 3 (AJ006966) Plasmodium falciparum genes encoding gamma-glutam... 32 0.99 5 (CP000743) Methanococcus aeolicus Nankai-3, complete genome. 34 1.00 19 (AE014840) Plasmodium falciparum 3D7 chromosome 11 section 5... 34 1.1 10 (AM424601) Vitis vinifera contig VV78X237783.6, whole genome... 36 1.1 4 (AE014822) Plasmodium falciparum 3D7 chromosome 14 section 7... 32 1.2 10 (AC110219) Mus musculus chromosome 1, clone RP24-541P18, com... 38 1.4 5 (AC206545) Pongo abelii BAC clone CH276-487H8 from chromosom... 36 1.4 2 (CU442708) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 1.4 2 (AC010176) Homo sapiens 12 BAC RP11-711K1 (Roswell Park Canc... 36 1.4 2 (AC090605) Homo sapiens chromosome 15, clone RP11-261P5, com... 32 1.4 2 (AC026074) Homo sapiens chromosome 15 clone RP11-261P5, WORK... 32 1.4 2 (BX927256) Zebrafish DNA sequence from clone CH211-272F14 in... 36 1.4 2 (CR391966) Zebrafish DNA sequence from clone CH211-269M15 in... 36 1.4 2 (BB981529) Plasmodium berghei str. ANKA cDNA clone: OK011805... 44 1.5 2 (Z46727) S.cerevisiae chromosome IV cosmid 9395. 44 1.6 2 (AB125359) Zostera caespitosa chloroplast gene for maturase,... 44 1.7 2 (CP000721) Clostridium beijerinckii NCIMB 8052, complete gen... 38 1.7 21 (EW760837) sb_009_12D06_m13reverselong Onychiurus arcticus d... 42 1.7 2 (AB125357) Zostera marina chloroplast gene for maturase, com... 44 1.8 2 (AB125356) Zostera marina chloroplast gene for maturase, com... 44 1.8 2 (AB125354) Zostera marina chloroplast gene for maturase, com... 44 1.8 2 (AB125355) Zostera marina chloroplast gene for maturase, com... 44 1.8 2 (AB125358) Zostera caulescens chloroplast gene for maturase,... 44 1.8 2 (AL590964) Human DNA sequence from clone RP11-505O14 on chro... 42 1.8 6 (DC226095) Plasmodium berghei strain ANKA cDNA clone:SG00473... 44 1.8 2 (AC005507) Plasmodium falciparum chromosome 12 clone PFYACB8... 40 1.8 9 (AL844507) Plasmodium falciparum chromosome 8. 32 1.9 13 (AL590484) Human DNA sequence from clone RP11-76E18 on chrom... 34 1.9 5 (BV434903) S237P6354FC9.T0 PortugueseWaterDog Canis familiar... 40 1.9 2 (BF298679) 019PbH12 Pb cDNA #20, Charles Yowell and Jane Car... 44 1.9 2 (BF294922) 010PbC09 Pb cDNA #17, Tommaso Pace, Marta Ponzi, ... 44 2.0 2 (BM165002) EST567525 PyBS Plasmodium yoelii yoelii cDNA clon... 44 2.0 2 (BB981348) Plasmodium berghei str. ANKA cDNA clone: OK011608... 44 2.0 2 (BH435571) BOGVN96TF BOGV Brassica oleracea genomic clone BO... 44 2.0 2 (DC219743) Plasmodium berghei strain ANKA cDNA clone:MZ00153... 44 2.1 2 (BM160163) EST562686 PyBS Plasmodium yoelii yoelii cDNA clon... 44 2.1 2 (AM630018) Entamoeba dispar GSS, clone dispar49g03.p1k. 38 2.2 2 (AY689437) Deerpox virus W-1170-84, complete genome. 36 2.2 8 (ED570160) SBA036_F01.r Sugar beet BAC library USH20 (Code S... 44 2.3 2 (AC153714) Bos taurus clone CH240-22J10, WORKING DRAFT SEQUE... 38 2.3 6 (AC005506) Plasmodium falciparum chromosome 12 clone PFYAC35... 34 2.3 9 (AM459903) Vitis vinifera contig VV78X116949.6, whole genome... 36 2.3 4 (AM637824) Entamoeba dispar GSS, clone dispar48b12.p1k. 38 2.3 2 (AC006279) Plasmodium falciparum chromosome 12 clone PFYAC61... 34 2.5 11 (AC005308) Plasmodium falciparum chromosome 12 clone PFYAC49... 32 2.6 10 (EI784758) CHORI518008J18TR BAC library from the breast cell... 38 2.7 3 (CT955961) Mouse DNA sequence from clone RP24-87E7 on chromo... 46 2.7 1 (AC109503) Mus musculus chromosome 12, clone RP23-427N7, com... 46 2.7 1 (AC183686) Pan troglodytes BAC clone CH251-209O13 from chrom... 46 2.7 1 (AC174355) Medicago truncatula chromosome 8 clone mth2-18d3,... 46 2.7 1 (AC145470) Medicago truncatula chromosome 8 clone mth2-6m8, ... 46 2.7 1 (AY232570) Donacia nitidior isolate N39 16S ribosomal RNA ge... 46 2.7 1 (AY138655) Ilybiosoma seriatum isolate Ilbseri2R 16S ribosom... 46 2.7 1 (AY138654) Ilybiosoma lugens 16S ribosomal RNA gene, partial... 46 2.7 1 (AY138653) Ilybiosoma seriatum isolate IlbC2.1 16S ribosomal... 46 2.7 1 (AY138652) Ilybiosoma seriatum isolate Ilb7.2R 16S ribosomal... 46 2.7 1 (AY138651) Ilybiosoma seriatum isolate Ilb7.1R 16S ribosomal... 46 2.7 1 (AY138650) Ilybiosoma perplexus 16S ribosomal RNA gene, part... 46 2.7 1 (AY138649) Ilybiosoma seriatum isolate Ilb27.3 16S ribosomal... 46 2.7 1 (AY039265) Agabus aubei 16S ribosomal RNA gene, partial sequ... 46 2.7 1 (AL354777) Human DNA sequence from clone RP11-33K8 on chromo... 46 2.7 1 (AC079349) Homo sapiens BAC clone RP11-436A7 from 4, complet... 46 2.7 1 (AC022075) Homo sapiens 12 BAC RP11-277P12 (Roswell Park Can... 46 2.7 1 (AC108376) Pan troglodytes clone S10883.BCM-22, *** SEQUENCI... 46 2.7 1 (AC079302) Homo sapiens chromosome 4 clone RP11-194O20, WORK... 46 2.7 1 (AP001391) Homo sapiens genomic DNA, chromosome 18q23 clone:... 46 2.7 1 (AC178169) Strongylocentrotus purpuratus clone R3-3081N19, W... 46 2.7 1 (AC175835) Strongylocentrotus purpuratus clone R3-3019D11, W... 46 2.7 1 (EK252554) 1095460286715 Global-Ocean-Sampling_GS-31-01-01-1... 46 2.7 1 (CT271780) Sus scrofa genomic clone PigE-197G20, genomic sur... 46 2.7 1 (CR879400) Sus scrofa BES. 46 2.7 1 (CO153142) EN01350.5prime Exelixis FlyTag MN08 BlueScript Dr... 46 2.7 1 (CP000361) Arcobacter butzleri RM4018, complete genome. 46 2.7 1 (AC233624) Solanum tuberosum strain Diploid genotype RH89-03... 36 2.9 8 (AE014831) Plasmodium falciparum 3D7 chromosome 10 section 3... 36 2.9 10 (AL929356) Plasmodium falciparum strain 3D7, chromosome 9; s... 32 3.0 11 (AE014833) Plasmodium falciparum 3D7 chromosome 10 section 5... 38 3.0 11 (AE017308) Mycoplasma mobile 163K complete genome. 36 3.0 13 (CR954186) Medicago truncatula chromosome 5 clone mth2-117e1... 38 3.4 5 (AL844506) Plasmodium falciparum chromosome 7. 42 3.4 15 (AC173253) Bos taurus clone CH240-411L22, WORKING DRAFT SEQU... 40 3.5 6 (AC203521) Spermophilus tridecemlineatus clone VMRC20-240L9,... 38 3.8 5 (AE014852) Plasmodium falciparum 3D7 chromosome 12, section ... 36 3.8 10 (AC095423) Rattus norvegicus clone CH230-7C18, *** SEQUENCIN... 44 4.0 6 (AX346940) Sequence 2011 from Patent WO0200928. 38 4.1 2 (AX344478) Sequence 325 from Patent WO0200926. 38 4.1 2 (BD453074) Diagnosis of Diseases Associated with tumor suppr... 38 4.1 2 (AX251553) Sequence 521 from Patent WO0168912. 38 4.1 2 (AC226508) Solanum lycopersicum chromosome 2 clone C02HBa013... 42 4.2 3 (AC021745) Homo sapiens chromosome 11 clone RP11-339D1 map 1... 44 4.3 4 (CZ250664) A16BL1.2M13R RAPD amplified fragment Antheraea my... 42 4.3 2 (BD347719) NOVEL HUMAN GENES AND GENE EXPRESSION PRODUCTS. 42 4.3 2 (AX071432) Sequence 1904 from Patent WO0102568. 42 4.3 2 (AM452377) Vitis vinifera contig VV78X261484.10, whole genom... 38 4.6 5 (AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 32 4.8 2 (AF466146) Melipona bicolor mitochondrial genome, partial se... 34 4.8 5 (EF506945) Leptosira terrestris UTEX 333 chloroplast, comple... 38 4.8 9 (AC159286) Mus musculus BAC clone RP23-314E22 from chromosom... 34 5.0 2 (CU469078) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 5.0 2 (AC015716) Homo sapiens clone RP11-92P3, WORKING DRAFT SEQUE... 32 5.0 2 (AC211350) Zea mays chromosome 9 clone CH201-176D15; ZMMBBc0... 34 5.0 2 (AC016833) Homo sapiens chromosome 15 clone RP11-438C24 map ... 32 5.0 2 (CU914756) S.lycopersicum DNA sequence from clone LE_HBa-244... 38 5.0 6 (AC121257) Mus musculus chromosome 14, clone RP24-202E4, com... 34 5.0 2 (AC079076) Homo sapiens chromosome 15 clone RP11-347P18 map ... 32 5.1 2 (AC110578) Homo sapiens chromosome 8 clone RP11-111G3 map 8,... 32 5.1 2 (AC090532) Homo sapiens chromosome 15 clone RP11-325L11 map ... 32 5.1 2 (AC215527) Oryza officinalis clone OO__Ba0067N19, complete s... 32 5.1 2 (AC140211) Mus musculus BAC clone RP24-474M1 from chromosome... 34 5.1 2 (AC084404) Oryza sativa chromosome 3 BAC OSJNBa0026A15 genom... 34 5.1 2 (AC091915) Homo sapiens chromosome 5 clone RP11-224A9, compl... 32 5.1 2 (AC232332) Oryza minuta clone OM__Ba0176F04, *** SEQUENCING ... 32 5.1 2 (CR352286) Zebrafish DNA sequence from clone CH211-93A20 in ... 40 5.2 6 (AC232077) Solanum tuberosum chromosome 1 clone RH095H15, **... 44 5.2 5 (AC090511) Homo sapiens chromosome 15 clone CTD-2370O8 map 1... 32 5.3 2 (EA690049) Sequence 68928 from patent US 7365185. 34 5.6 2 (AP006658) Lotus japonicus genomic DNA, chromosome 4, clone:... 40 5.7 5 (AY487398) Stoliczkaia borneensis recombination-activating g... 42 5.7 2 (AC120522) Canis lupus familiaris clone RP81-417N7, WORKING ... 42 5.7 6 (AC202747) Chlorocebus aethiops clone CH252-322L2, WORKING D... 40 5.7 3 (CU463089) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 5.9 2 (AC004157) Plasmodium falciparum chromosome 12 clone PFYAC29... 34 6.0 8 (AE014825) Plasmodium falciparum 3D7 chromosome 14 section 1... 30 6.3 12 (BX957363) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 6.3 6 (AE001579) Borrelia burgdorferi B31 plasmid cp32-7, complete... 36 6.4 4 (BF297074) 046PbG07 Pb cDNA #17, Tommaso Pace, Marta Ponzi, ... 42 6.5 2 (AJ311621) Entamoeba histolytica rpl27a-3 gene for ribosomal... 32 6.6 2 (AC150798) Medicago truncatula chromosome 2 clone mth2-33b11... 38 6.8 9 (AC162217) Bos taurus clone CH240-111N20, WORKING DRAFT SEQU... 34 6.9 6 (BV038647) S212P6545FG8.T0 CZECHII/Ei Mus musculus STS genom... 34 6.9 2 (DC200995) Plasmodium berghei cDNA clone:LV013862, liver sta... 34 6.9 2 (BF296234) 034PbC09 Pb cDNA #17, Tommaso Pace, Marta Ponzi, ... 42 7.0 2 (CR382401) Plasmodium falciparum chromosome 6, complete sequ... 32 7.0 10 (AE014845) Plasmodium falciparum 3D7 chromosome 12, section ... 32 7.2 9 (AC165453) Bos taurus clone CH240-321L12, WORKING DRAFT SEQU... 34 7.6 8 (AE014834) Plasmodium falciparum 3D7 chromosome 10 section 6... 34 7.6 9 (GD220397) G1045P398FF12.T1 Aplysia californica Pooled Norma... 34 7.8 2 (AE014851) Plasmodium falciparum 3D7 chromosome 12, section ... 34 7.9 11 (AC178877) Strongylocentrotus purpuratus clone R3-27F2, WORK... 36 8.1 7 (AC233064) Solanum lycopersicum chromosome 9 clone C09HBa016... 36 8.4 7 (AQ986478) RPCI-23-322M8.TJ RPCI-23 Mus musculus genomic clo... 38 8.4 2 (FF080094) G1045P312FE16.T0 Aplysia californica Pooled Norma... 34 8.5 2 (AC008043) Drosophila melanogaster, chromosome 3R, region 94... 38 8.7 6 (AL929358) Plasmodium falciparum strain 3D7, chromosome 9; s... 32 8.8 10 (AC009101) Homo sapiens chromosome 16 clone RP11-439I14, com... 40 9.3 6 (AL034557) Plasmodium falciparum MAL4P1. 32 9.8 13 (AL355136) Human DNA sequence from clone RP11-435P18 on chro... 34 9.9 7
>(C90555) Dictyostelium discoideum slug cDNA, clone SSI718. Length = 647
Score = 1277 bits (644), Expect = 0.0 Identities = 644/644 (100%) Strand = Plus / Plus
Query: 246 agcagcatcagcatcacaacaaaataatcctacttcattatttgaaattacagatttaag 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3 agcagcatcagcatcacaacaaaataatcctacttcattatttgaaattacagatttaag 62
Query: 306 tttaaagaatgatattatagagggtttacaagaacaacctcaagattcagatctattggc 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tttaaagaatgatattatagagggtttacaagaacaacctcaagattcagatctattggc 122
Query: 366 acaatatggtgtattattgtcaatggagggtaaaaataaagaagcagaagaatcattaag 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123 acaatatggtgtattattgtcaatggagggtaaaaataaagaagcagaagaatcattaag 182
Query: 426 gaaagctgtagaggttgatactgataactctagagcttggcaagcatatggtgaattttt 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 gaaagctgtagaggttgatactgataactctagagcttggcaagcatatggtgaattttt 242
Query: 486 agaaagaacaaataatccaaagaaagcaaaagaagtttatggtgaagcttataaacatgc 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 agaaagaacaaataatccaaagaaagcaaaagaagtttatggtgaagcttataaacatgc 302
Query: 546 tgctccaaagattgcattagacgaagatgatagtagtttattattaagttatgcaatttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 303 tgctccaaagattgcattagacgaagatgatagtagtttattattaagttatgcaatttt 362
Query: 606 cattcaaaaatcaggagaaatagataaagcagagaaattatataaaagaattgttactag 665 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 cattcaaaaatcaggagaaatagataaagcagagaaattatataaaagaattgttactag 422
Query: 666 tggtgctcgtagttcagagtcattaggtcgttatggtttattcttattggaggttaaaaa 725 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 423 tggtgctcgtagttcagagtcattaggtcgttatggtttattcttattggaggttaaaaa 482
Query: 726 agatgttgaaaagggtggcatttacttaaaagatgcagcagatattgacccaccatcacc 785 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 483 agatgttgaaaagggtggcatttacttaaaagatgcagcagatattgacccaccatcacc 542
Query: 786 tgaatggtgtacaagatattcaaattatcttaaaacttataaaaaagatgaatttgaagc 845 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 543 tgaatggtgtacaagatattcaaattatcttaaaacttataaaaaagatgaatttgaagc 602
Query: 846 aacaaaatatcaaaagagagttagtttatatgtaaattaatatt 889 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 603 aacaaaatatcaaaagagagttagtttatatgtaaattaatatt 646
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 102105510 Number of Hits to DB: 1,162,373,527 Number of extensions: 76041171 Number of successful extensions: 6672464 Number of sequences better than 10.0: 194 Length of query: 1035 Length of database: 101,790,757,118 Length adjustment: 24 Effective length of query: 1011 Effective length of database: 99,340,224,878 Effective search space: 100432967351658 Effective search space used: 100432967351658 X1: 11 (21.8 bits) S2: 22 (44.1 bits)
|
protein update |
2009. 7.18 |
Homology vs Protein |
Query= Contig-U02024-1 (Contig-U02024-1Q) /CSM_Contig/Contig-U02024-1Q.Seq.d (1035 letters)
Database: nrp_B 3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
AP009380_1340(AP009380|pid:none) Porphyromonas gingivalis ATCC 3... 68 6e-10 CP000099_2442(CP000099|pid:none) Methanosarcina barkeri str. Fus... 64 1e-08 CP000099_3087(CP000099|pid:none) Methanosarcina barkeri str. Fus... 57 8e-07 CP000099_2445(CP000099|pid:none) Methanosarcina barkeri str. Fus... 57 1e-06 FP102531_56(FP102531|pid:none) magnetite-containing magnetic vib... 53 2e-05 CP001132_2246(CP001132|pid:none) Acidithiobacillus ferrooxidans ... 50 1e-04 CP000471_3263(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 50 1e-04 AE000666_69(AE000666|pid:none) Methanothermobacter thermautotrop... 49 4e-04 BC074400_1(BC074400|pid:none) Xenopus laevis MGC84386 protein, m... 48 5e-04 AC159432_5(AC159432|pid:none) Trypanosoma brucei chromosome 5 cl... 47 8e-04 AF305603_1(AF305603|pid:none) Borrelia burgdorferi isolate 3 LMP... 47 8e-04 AE008384_3110(AE008384|pid:none) Methanosarcina mazei strain Goe... 46 0.002 AE008384_2594(AE008384|pid:none) Methanosarcina mazei strain Goe... 46 0.002 AE000666_1549(AE000666|pid:none) Methanothermobacter thermautotr... 46 0.002 CP000095_1920(CP000095|pid:none) Prochlorococcus marinus str. NA... 45 0.003 AE017180_2600(AE017180|pid:none) Geobacter sulfurreducens PCA, c... 45 0.004 CP000081_139(CP000081|pid:none) Leishmania major chromosome 35, ... 44 0.007 AE008384_2348(AE008384|pid:none) Methanosarcina mazei strain Goe... 44 0.009 CP000742_47(CP000742|pid:none) Methanococcus vannielii SB, compl... 44 0.009 CP000393_407(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 44 0.012 CP000698_2328(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 43 0.016 CP000386_2633(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 43 0.016 CP000095_419(CP000095|pid:none) Prochlorococcus marinus str. NAT... 43 0.016 EU955788_1(EU955788|pid:none) Zea mays clone 1546167 hypothetica... 43 0.016 AY534317_5(AY534317|pid:none) Actinobacillus pleuropneumoniae is... 43 0.016 CP000738_454(CP000738|pid:none) Sinorhizobium medicae WSM419, co... 43 0.016 CP001091_1639(CP001091|pid:none) Actinobacillus pleuropneumoniae... 43 0.016 AP006840_937(AP006840|pid:none) Symbiobacterium thermophilum IAM... 43 0.016 BX950229_873(BX950229|pid:none) Methanococcus maripaludis strain... 43 0.021 CP000099_2958(CP000099|pid:none) Methanosarcina barkeri str. Fus... 43 0.021 CP000478_5(CP000478|pid:none) Syntrophobacter fumaroxidans MPOB,... 43 0.021 CR847783_1(CR847783|pid:none) Zebrafish DNA sequence from clone ... 42 0.027 AF305605_1(AF305605|pid:none) Borrelia burgdorferi isolate 5 LMP... 42 0.035 CP000553_44(CP000553|pid:none) Prochlorococcus marinus str. NATL... 42 0.035 AF305608_1(AF305608|pid:none) Borrelia burgdorferi isolate 8 LMP... 42 0.035 AE008384_3330(AE008384|pid:none) Methanosarcina mazei strain Goe... 42 0.035 AF305599_1(AF305599|pid:none) Borrelia burgdorferi strain B31 LM... 42 0.035 AF305607_1(AF305607|pid:none) Borrelia burgdorferi isolate 7 LMP... 42 0.035 CP001205_201(CP001205|pid:none) Borrelia burgdorferi ZS7, comple... 42 0.035 CP001357_835(CP001357|pid:none) Brachyspira hyodysenteriae WA1, ... 42 0.035 AF305601_1(AF305601|pid:none) Borrelia burgdorferi isolate 1 LMP... 42 0.035 CP000140_3086(CP000140|pid:none) Parabacteroides distasonis ATCC... 42 0.046 CP001080_329(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP1... 42 0.046 CP000514_1109(CP000514|pid:none) Marinobacter aquaeolei VT8, com... 42 0.046 CP000254_965(CP000254|pid:none) Methanospirillum hungatei JF-1, ... 41 0.060 AM494971_134(AM494971|pid:none) Leishmania braziliensis chromoso... 41 0.060 AE014298_282(AE014298|pid:none) Drosophila melanogaster chromoso... 41 0.060 AP007255_2357(AP007255|pid:none) Magnetospirillum magneticum AMB... 41 0.060 (Q6DCD5) RecName: Full=Transmembrane and TPR repeat-containing p... 41 0.060 CP001087_99(CP001087|pid:none) Desulfobacterium autotrophicum HR... 41 0.079 AE017226_1525(AE017226|pid:none) Treponema denticola ATCC 35405,... 41 0.079 AM114193_1631(AM114193|pid:none) Uncultured methanogenic archaeo... 41 0.079 AE010299_3171(AE010299|pid:none) Methanosarcina acetivorans str.... 41 0.079 AK044857_1(AK044857|pid:none) Mus musculus 9.5 days embryo parth... 40 0.10 AP009049_2033(AP009049|pid:none) Clostridium kluyveri NBRC 12016... 40 0.10 CP000155_3140(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 40 0.10 AC005496_22(AC005496|pid:none) Arabidopsis thaliana chromosome 2... 40 0.10 AM778958_382(AM778958|pid:none) Microcystis aeruginosa PCC 7806 ... 40 0.10 (Q8BRH0) RecName: Full=Transmembrane and TPR repeat-containing p... 40 0.10 AK119028_1(AK119028|pid:none) Arabidopsis thaliana At2g29670 mRN... 40 0.10 CP000477_86(CP000477|pid:none) Methanosaeta thermophila PT, comp... 40 0.13 CP000769_2916(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 40 0.13 (Q56A06) RecName: Full=Transmembrane and TPR repeat-containing p... 40 0.13 T11665(T11665)probable cell division cycle protein - fission yea... 40 0.13 AM455445_2(AM455445|pid:none) Vitis vinifera contig VV78X036406.... 40 0.13 CR352306_2(CR352306|pid:none) Zebrafish DNA sequence from clone ... 40 0.13 AE008384_44(AE008384|pid:none) Methanosarcina mazei strain Goe1,... 40 0.13 CP000108_1674(CP000108|pid:none) Chlorobium chlorochromatii CaD3... 40 0.13 CP000494_2214(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 40 0.13 AP010656_183(AP010656|pid:none) Candidatus Azobacteroides pseudo... 40 0.13 CP000553_1814(CP000553|pid:none) Prochlorococcus marinus str. NA... 40 0.13 CP000095_378(CP000095|pid:none) Prochlorococcus marinus str. NAT... 40 0.17 CP000254_2541(CP000254|pid:none) Methanospirillum hungatei JF-1,... 40 0.17 CP001230_1906(CP001230|pid:none) Persephonella marina EX-H1, com... 40 0.17 CU234118_1905(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 40 0.17 AE008384_99(AE008384|pid:none) Methanosarcina mazei strain Goe1,... 40 0.17 (Q8N394) RecName: Full=Transmembrane and TPR repeat-containing p... 39 0.23 AX795394_1(AX795394|pid:none) Sequence 3 from Patent WO03052412. 39 0.23 CP000251_3404(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 39 0.23 AP010904_2050(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 39 0.23 AE010299_1324(AE010299|pid:none) Methanosarcina acetivorans str.... 39 0.23 CP001322_5229(CP001322|pid:none) Desulfatibacillum alkenivorans ... 39 0.23 CP000099_3513(CP000099|pid:none) Methanosarcina barkeri str. Fus... 39 0.23 CP001287_3133(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 39 0.23 AY065061_1(AY065061|pid:none) Arabidopsis thaliana At1g07280/F22... 39 0.23 CP000099_10(CP000099|pid:none) Methanosarcina barkeri str. Fusar... 39 0.23 AK299771_1(AK299771|pid:none) Homo sapiens cDNA FLJ54938 complet... 39 0.23 CP000777_436(CP000777|pid:none) Leptospira biflexa serovar Patoc... 39 0.30 CP001390_358(CP001390|pid:none) Geobacter sp. FRC-32, complete g... 39 0.30 AK055962_1(AK055962|pid:none) Homo sapiens cDNA FLJ31400 fis, cl... 39 0.30 AK123619_1(AK123619|pid:none) Homo sapiens cDNA FLJ41625 fis, cl... 39 0.30 CP000553_1813(CP000553|pid:none) Prochlorococcus marinus str. NA... 39 0.30 CP000859_2619(CP000859|pid:none) Desulfococcus oleovorans Hxd3, ... 39 0.39 CU633448_198(CU633448|pid:none) Podospora anserina genomic DNA c... 39 0.39 CP000013_208(CP000013|pid:none) Borrelia garinii PBi, complete g... 39 0.39 CP000254_783(CP000254|pid:none) Methanospirillum hungatei JF-1, ... 39 0.39 CP000494_4082(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 39 0.39 CP000393_2497(CP000393|pid:none) Trichodesmium erythraeum IMS101... 39 0.39 CP000554_2375(CP000554|pid:none) Prochlorococcus marinus str. MI... 39 0.39 CP000699_1055(CP000699|pid:none) Sphingomonas wittichii RW1, com... 39 0.39 AE010299_3605(AE010299|pid:none) Methanosarcina acetivorans str.... 39 0.39 CP000777_2728(CP000777|pid:none) Leptospira biflexa serovar Pato... 39 0.39 CP000554_2396(CP000554|pid:none) Prochlorococcus marinus str. MI... 38 0.51 BT053167_1(BT053167|pid:none) Medicago truncatula clone MTYFL_FM... 38 0.51 CP000254_2327(CP000254|pid:none) Methanospirillum hungatei JF-1,... 38 0.51 CP000473_1913(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 38 0.66 CP000095_1620(CP000095|pid:none) Prochlorococcus marinus str. NA... 38 0.66 AM424139_3(AM424139|pid:none) Vitis vinifera contig VV78X033795.... 38 0.66 CP001472_158(CP001472|pid:none) Acidobacterium capsulatum ATCC 5... 38 0.66 CR790375_1(CR790375|pid:none) Zebrafish DNA sequence from clone ... 38 0.66 CP000521_478(CP000521|pid:none) Acinetobacter baumannii ATCC 179... 38 0.66 BA000040_7118(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 38 0.66 CP000744_5252(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 37 0.87 CU210900_2(CU210900|pid:none) Mouse DNA sequence from clone CH29... 37 0.87 CP001130_1028(CP001130|pid:none) Hydrogenobaculum sp. Y04AAS1, c... 37 0.87 BC079997_1(BC079997|pid:none) Xenopus laevis hypothetical protei... 37 0.87 CP000878_1442(CP000878|pid:none) Prochlorococcus marinus str. MI... 37 0.87 AK070000_1(AK070000|pid:none) Oryza sativa Japonica Group cDNA c... 37 0.87 CP000463_2648(CP000463|pid:none) Rhodopseudomonas palustris BisA... 37 0.87 BC115724_1(BC115724|pid:none) Mus musculus nephronophthisis 3 (a... 37 0.87 CP000473_3282(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 37 0.87 AK173327_1(AK173327|pid:none) Mus musculus mRNA for mKIAA2000 pr... 37 0.87 CP000438_4974(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 37 0.87 AP003442_21(AP003442|pid:none) Oryza sativa Japonica Group genom... 37 0.87 CR555306_2082(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 37 0.87 CP000095_38(CP000095|pid:none) Prochlorococcus marinus str. NATL... 37 0.87 CP000095_2064(CP000095|pid:none) Prochlorococcus marinus str. NA... 37 0.87 AK046396_1(AK046396|pid:none) Mus musculus adult male corpora qu... 37 0.87 CP000248_1666(CP000248|pid:none) Novosphingobium aromaticivorans... 37 1.1 CP000099_270(CP000099|pid:none) Methanosarcina barkeri str. Fusa... 37 1.1 CR936640_1(CR936640|pid:none) Homo sapiens mRNA; cDNA DKFZp686O2... 37 1.1 AE001437_2952(AE001437|pid:none) Clostridium acetobutylicum ATCC... 37 1.1 AK290436_1(AK290436|pid:none) Homo sapiens cDNA FLJ78524 complet... 37 1.1 BA000045_1119(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 37 1.1 AK302755_1(AK302755|pid:none) Homo sapiens cDNA FLJ52097 complet... 37 1.1 (P42810) RecName: Full=TPR repeat-containing protein PA4667; &A... 37 1.1 CP001197_2712(CP001197|pid:none) Desulfovibrio vulgaris str. 'Mi... 37 1.1 CP000510_1131(CP000510|pid:none) Psychromonas ingrahamii 37, com... 37 1.1 CR933632_1(CR933632|pid:none) Homo sapiens mRNA; cDNA DKFZp686C0... 37 1.1 BC098811_1(BC098811|pid:none) Rattus norvegicus tetratricopeptid... 37 1.1 AE008384_2350(AE008384|pid:none) Methanosarcina mazei strain Goe... 37 1.1 CP000507_2359(CP000507|pid:none) Shewanella amazonensis SB2B, co... 37 1.1 CP001323_83(CP001323|pid:none) Micromonas sp. RCC299 chromosome ... 37 1.1 CP000655_487(CP000655|pid:none) Polynucleobacter necessarius sub... 37 1.1 AC022464_38(AC022464|pid:none) Genomic sequence for Arabidopsis ... 37 1.1 CP001348_1156(CP001348|pid:none) Clostridium cellulolyticum H10,... 37 1.1 BC034657_1(BC034657|pid:none) Mus musculus transmembrane and tet... 37 1.1 CR749244_1(CR749244|pid:none) Homo sapiens mRNA; cDNA DKFZp686M1... 37 1.1 CP001147_1446(CP001147|pid:none) Thermodesulfovibrio yellowstoni... 37 1.1 CP000393_1249(CP000393|pid:none) Trichodesmium erythraeum IMS101... 37 1.1 CT573072_233(CT573072|pid:none) Kuenenia stuttgartiensis genome ... 37 1.1 AB082531_1(AB082531|pid:none) Homo sapiens mRNA for KIAA2000 pro... 37 1.5 CP000926_2490(CP000926|pid:none) Pseudomonas putida GB-1, comple... 37 1.5 CP001172_2978(CP001172|pid:none) Acinetobacter baumannii AB307-0... 37 1.5 CP000740_646(CP000740|pid:none) Sinorhizobium medicae WSM419 pla... 37 1.5 (Q6ZXV5) RecName: Full=Transmembrane and TPR repeat-containing p... 37 1.5 (Q8NCM5) RecName: Full=Nephrocystin-3; &AY257864_1(AY257864|pid... 37 1.5 AE006470_1607(AE006470|pid:none) Chlorobium tepidum TLS, complet... 37 1.5 CP000562_1307(CP000562|pid:none) Methanoculleus marisnigri JR1, ... 37 1.5 AC133341_21(AC133341|pid:none) Medicago truncatula clone mth2-28... 37 1.5 EF592032_1(EF592032|pid:none) Chlamydomonas reinhardtii intrafla... 37 1.5 CP000554_2385(CP000554|pid:none) Prochlorococcus marinus str. MI... 37 1.5 AE015924_826(AE015924|pid:none) Porphyromonas gingivalis W83, co... 37 1.5 AK165838_1(AK165838|pid:none) Mus musculus lung RCB-0558 LLC cDN... 37 1.5 AP009380_996(AP009380|pid:none) Porphyromonas gingivalis ATCC 33... 37 1.5 CP000492_1780(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 37 1.5 CR749309_1(CR749309|pid:none) Homo sapiens mRNA; cDNA DKFZp686O2... 37 1.5 AP010904_2948(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 37 1.5 CU459141_3073(CU459141|pid:none) Acinetobacter baumannii str. AY... 37 1.5 CP000828_559(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 37 1.5 BX908798_171(BX908798|pid:none) Parachlamydia-related symbiont U... 37 1.5 CP000551_38(CP000551|pid:none) Prochlorococcus marinus str. AS96... 37 1.5 CP000867_1767(CP000867|pid:none) Methanococcus maripaludis C6, c... 37 1.5 CP000554_2037(CP000554|pid:none) Prochlorococcus marinus str. MI... 37 1.5 EF083286_1(EF083286|pid:none) Picea sitchensis clone WS0282_K03 ... 36 1.9 CP001638_2249(CP001638|pid:none) Geobacillus sp. WCH70, complete... 36 1.9 AE015928_1326(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 36 1.9 CP001110_581(CP001110|pid:none) Pelodictyon phaeoclathratiforme ... 36 1.9 EU969720_1(EU969720|pid:none) Zea mays clone 334652 hypothetical... 36 1.9 CP000077_1892(CP000077|pid:none) Sulfolobus acidocaldarius DSM 6... 36 1.9 AE017226_985(AE017226|pid:none) Treponema denticola ATCC 35405, ... 36 1.9 AL133292_13(AL133292|pid:none) Arabidopsis thaliana DNA chromoso... 36 1.9 EU970782_1(EU970782|pid:none) Zea mays clone 350762 hypothetical... 36 1.9 AK052344_1(AK052344|pid:none) Mus musculus 13 days embryo heart ... 36 1.9 CP001322_133(CP001322|pid:none) Desulfatibacillum alkenivorans A... 36 1.9 AK039560_1(AK039560|pid:none) Mus musculus adult male spinal cor... 36 2.5 AF000196_4(AF000196|pid:none) Caenorhabditis elegans cosmid B004... 36 2.5 AY087263_1(AY087263|pid:none) Arabidopsis thaliana clone 33385 m... 36 2.5 FM954972_2311(FM954972|pid:none) Vibrio splendidus LGP32 chromos... 36 2.5 AE008384_2720(AE008384|pid:none) Methanosarcina mazei strain Goe... 36 2.5 AK226990_1(AK226990|pid:none) Arabidopsis thaliana mRNA for hypo... 36 2.5 CU234118_4939(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 36 2.5 CP000576_40(CP000576|pid:none) Prochlorococcus marinus str. MIT ... 36 2.5 T34032(T34032)hypothetical protein B0041.5 - Caenorhabditis eleg... 36 2.5 FP312975_7(FP312975|pid:none) uncultured bacterial clone magm950... 36 2.5 AB026636_11(AB026636|pid:none) Arabidopsis thaliana genomic DNA,... 36 2.5 AY093112_1(AY093112|pid:none) Arabidopsis thaliana unknown prote... 36 2.5 AL021889_12(AL021889|pid:none) Arabidopsis thaliana DNA chromoso... 36 2.5 (Q8C1Z7) RecName: Full=Bardet-Biedl syndrome 4 protein homolog; ... 36 2.5 BC055797_1(BC055797|pid:none) Mus musculus Bardet-Biedl syndrome... 36 2.5 BC092531_1(BC092531|pid:none) Mus musculus Bardet-Biedl syndrome... 36 2.5 AM486621_1(AM486621|pid:none) Vitis vinifera contig VV78X034347.... 36 2.5 CP001087_2236(CP001087|pid:none) Desulfobacterium autotrophicum ... 36 2.5 AE016853_3035(AE016853|pid:none) Pseudomonas syringae pv. tomato... 35 3.3 BC111487_1(BC111487|pid:none) Homo sapiens tetratricopeptide rep... 35 3.3 BC114365_1(BC114365|pid:none) Homo sapiens tetratricopeptide rep... 35 3.3 CP001132_197(CP001132|pid:none) Acidithiobacillus ferrooxidans A... 35 3.3 AK165244_1(AK165244|pid:none) Mus musculus 6 days neonate spleen... 35 3.3 CP000781_1371(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 35 3.3 AL834383_1(AL834383|pid:none) Homo sapiens mRNA; cDNA DKFZp434B0... 35 3.3 CP000494_5334(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 35 3.3 AE004091_3804(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 35 3.3 CP000438_1172(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 35 3.3 AB032966_1(AB032966|pid:none) Homo sapiens mRNA for KIAA1140 pro... 35 3.3 BC027457_1(BC027457|pid:none) Homo sapiens tetratricopeptide rep... 35 3.3 BC035708_1(BC035708|pid:none) Homo sapiens tetratricopeptide rep... 35 3.3 CP000539_884(CP000539|pid:none) Acidovorax sp. JS42, complete ge... 35 3.3 CP000544_551(CP000544|pid:none) Halorhodospira halophila SL1, co... 35 3.3 BA000022_2661(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,... 35 3.3 CP000473_3686(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 35 3.3 BX908798_172(BX908798|pid:none) Parachlamydia-related symbiont U... 35 3.3 CP000254_96(CP000254|pid:none) Methanospirillum hungatei JF-1, c... 35 3.3 AM114193_386(AM114193|pid:none) Uncultured methanogenic archaeon... 35 3.3 (P33292) RecName: Full=Peroxisomal targeting signal receptor; ... 35 3.3 CP000477_492(CP000477|pid:none) Methanosaeta thermophila PT, com... 35 3.3 AK056464_1(AK056464|pid:none) Homo sapiens cDNA FLJ31902 fis, cl... 35 3.3 JC5302(JC5302) PilF protein - Pseudomonas aeruginosa &L49434_2(... 35 3.3 AE010299_2135(AE010299|pid:none) Methanosarcina acetivorans str.... 35 3.3 CR378673_218(CR378673|pid:none) Photobacterium profundum SS9; se... 35 3.3 CP000612_1726(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 35 4.3 AE010299_1572(AE010299|pid:none) Methanosarcina acetivorans str.... 35 4.3 CP000633_2825(CP000633|pid:none) Agrobacterium vitis S4 chromoso... 35 4.3 CP000254_1872(CP000254|pid:none) Methanospirillum hungatei JF-1,... 35 4.3 DQ139261_10(DQ139261|pid:none) Vibro sp. DAT722 inDAT722 integro... 35 4.3 CP000554_2384(CP000554|pid:none) Prochlorococcus marinus str. MI... 35 4.3 AP009380_1899(AP009380|pid:none) Porphyromonas gingivalis ATCC 3... 35 4.3 AE010299_1919(AE010299|pid:none) Methanosarcina acetivorans str.... 35 4.3 CP001392_816(CP001392|pid:none) Diaphorobacter sp. TPSY, complet... 35 4.3 CP001635_529(CP001635|pid:none) Variovorax paradoxus S110 chromo... 35 4.3 DQ068067_67(DQ068067|pid:none) Uncultured bacterium BAC13K9BAC, ... 35 4.3 AY070455_1(AY070455|pid:none) Arabidopsis thaliana putative TPR ... 35 4.3 AC006413_3(AC006413|pid:none) Arabidopsis thaliana chromosome 2 ... 35 4.3 CP000553_45(CP000553|pid:none) Prochlorococcus marinus str. NATL... 35 4.3 CP000319_374(CP000319|pid:none) Nitrobacter hamburgensis X14, co... 35 4.3 AM889285_2405(AM889285|pid:none) Gluconacetobacter diazotrophicu... 35 4.3 CP000609_675(CP000609|pid:none) Methanococcus maripaludis C5, co... 35 4.3 AF305612_1(AF305612|pid:none) Borrelia burgdorferi strain pGau L... 35 4.3 CR858933_1(CR858933|pid:none) Pongo abelii mRNA; cDNA DKFZp469G2... 35 4.3 AY049236_1(AY049236|pid:none) Arabidopsis thaliana AT5g63200/MDC... 35 5.6 AB008265_17(AB008265|pid:none) Arabidopsis thaliana genomic DNA,... 35 5.6 AK175599_1(AK175599|pid:none) Arabidopsis thaliana mRNA, complet... 35 5.6 AE008384_2801(AE008384|pid:none) Methanosarcina mazei strain Goe... 35 5.6 (Q8RVB2) RecName: Full=Probable UDP-N-acetylglucosamine--peptide... 35 5.6 CP000553_1568(CP000553|pid:none) Prochlorococcus marinus str. NA... 35 5.6 CP000049_201(CP000049|pid:none) Borrelia turicatae 91E135, compl... 35 5.6 CP000482_3281(CP000482|pid:none) Pelobacter propionicus DSM 2379... 35 5.6 CP000544_1502(CP000544|pid:none) Halorhodospira halophila SL1, c... 35 5.6 CP000712_866(CP000712|pid:none) Pseudomonas putida F1, complete ... 35 5.6 CP000492_1779(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 35 5.6 (O94474) RecName: Full=Superkiller protein 3; &AL035075_5(AL035... 35 5.6 CP000655_1164(CP000655|pid:none) Polynucleobacter necessarius su... 35 5.6 AL954747_2160(AL954747|pid:none) Nitrosomonas europaea ATCC 1971... 35 5.6 AE017282_1434(AE017282|pid:none) Methylococcus capsulatus str. B... 35 5.6 CP000804_209(CP000804|pid:none) Roseiflexus castenholzii DSM 139... 35 5.6 BX294151_216(BX294151|pid:none) Rhodopirellula baltica SH 1 comp... 35 5.6 AY267659_1(AY267659|pid:none) Bigelowiella natans PsbA maturatio... 35 5.6 CP000961_1529(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 35 5.6 AE017221_263(AE017221|pid:none) Thermus thermophilus HB27, compl... 35 5.6 CP001330_227(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 35 5.6 CP001291_1331(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 35 5.6 AE014296_1547(AE014296|pid:none) Drosophila melanogaster chromos... 34 7.3 CP001357_366(CP001357|pid:none) Brachyspira hyodysenteriae WA1, ... 34 7.3 CP000076_5089(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 34 7.3 CP000774_2663(CP000774|pid:none) Parvibaculum lavamentivorans DS... 34 7.3 AE017343_582(AE017343|pid:none) Cryptococcus neoformans var. neo... 34 7.3 CP000780_2357(CP000780|pid:none) Candidatus Methanoregula boonei... 34 7.3 AP008209_1265(AP008209|pid:none) Oryza sativa (japonica cultivar... 34 7.3 CP000102_1280(CP000102|pid:none) Methanosphaera stadtmanae DSM 3... 34 7.3 CP001055_296(CP001055|pid:none) Elusimicrobium minutum Pei191, c... 34 7.3 CP001089_3342(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 34 7.3 CP000240_1532(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-1... 34 7.3 AM455421_1(AM455421|pid:none) Vitis vinifera contig VV78X212299.... 34 7.3 (O82039) RecName: Full=Probable UDP-N-acetylglucosamine--peptide... 34 7.3 CP001229_912(CP001229|pid:none) Sulfurihydrogenibium azorense Az... 34 7.3 BC166212_1(BC166212|pid:none) Xenopus tropicalis tetratricopepti... 34 7.3 CP000099_408(CP000099|pid:none) Methanosarcina barkeri str. Fusa... 34 7.3 BA000012_2044(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 34 7.3 CP000482_1062(CP000482|pid:none) Pelobacter propionicus DSM 2379... 34 7.3 CP001147_1402(CP001147|pid:none) Thermodesulfovibrio yellowstoni... 34 7.3 BC059994_1(BC059994|pid:none) Xenopus laevis Translocase of oute... 34 7.3 CP000828_1346(CP000828|pid:none) Acaryochloris marina MBIC11017,... 34 7.3 AM286690_1862(AM286690|pid:none) Alcanivorax borkumensis SK2, co... 34 7.3 AP009552_3058(AP009552|pid:none) Microcystis aeruginosa NIES-843... 34 9.6 (Q9FNS4) RecName: Full=PsbB mRNA maturation factor Mbb1, chlorop... 34 9.6 CP000393_4193(CP000393|pid:none) Trichodesmium erythraeum IMS101... 34 9.6 CP001124_1750(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 34 9.6 CP000254_2334(CP000254|pid:none) Methanospirillum hungatei JF-1,... 34 9.6 CP000478_73(CP000478|pid:none) Syntrophobacter fumaroxidans MPOB... 34 9.6 BC077424_1(BC077424|pid:none) Xenopus laevis ubiquitously transc... 34 9.6 AG1971(AG1971) hypothetical protein all1322 [imported] - Nostoc ... 34 9.6 AE017180_1537(AE017180|pid:none) Geobacter sulfurreducens PCA, c... 34 9.6 AE010300_465(AE010300|pid:none) Leptospira interrogans serovar l... 34 9.6 CP001110_1364(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 34 9.6 BX842652_271(BX842652|pid:none) Bdellovibrio bacteriovorus compl... 34 9.6 CP000817_1908(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 34 9.6 CP000884_5003(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 34 9.6 CP001107_3145(CP001107|pid:none) Eubacterium rectale ATCC 33656,... 34 9.6 BC161298_1(BC161298|pid:none) Xenopus tropicalis hypothetical pr... 34 9.6 AK028333_1(AK028333|pid:none) Mus musculus 12 days embryo embryo... 34 9.6 BC166723_1(BC166723|pid:none) Rattus norvegicus transmembrane an... 34 9.6 CP001037_4728(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 34 9.6 CP000951_2520(CP000951|pid:none) Synechococcus sp. PCC 7002, com... 34 9.6
>AP009380_1340(AP009380|pid:none) Porphyromonas gingivalis ATCC 33277 DNA, complete genome. Length = 987
Score = 67.8 bits (164), Expect = 6e-10 Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 2/180 (1%) Frame = +1
Query: 331 LQEQPQDSDLLAQYGVLL-SMEGKNKEAEESLRKAVEVDTDNSRAWQAYGEFLERTNNPK 507 L+ P ++ L Y L + +AE ++A+E D N Y FL + Sbjct: 592 LEVGPNHANNLGNYASFLHDIRHAYDQAEAYYKRALEADPKNVVTLGNYANFLCNIRHAY 651
Query: 508 KAKEVYGEAYKHAAPKIAXXXXXXXXXXXYAIFIQK-SGEIDKAEKLYKRIVTSGARSSE 684 EVY A PK A YA+F+ + D+AE+ YK+ + + +++ Sbjct: 652 DQAEVYYRRALEADPKNAVTLGN------YAVFLNDIRHDYDQAERYYKKALDADQKNAN 705
Query: 685 SLGRYGLFLLEVKKDVEKGGIYLKDAADIDPPSPEWCTRYSNYLKTYKKDEFEATKYQKR 864 +LG Y +FL ++ D ++G Y K A D DP Y+++L T + +A Y KR Sbjct: 706 ALGNYAVFLNNIRHDYDQGERYYKKALDADPNHANTLGNYASFLHTIRHAYDQAEVYYKR 765
Score = 66.6 bits (161), Expect = 1e-09 Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 10/206 (4%) Frame = +1
Query: 247 AASASQQN-NPTSLFEITDLSLKNDIIEG-------LQEQPQDSDLLAQYGVLL-SMEGK 399 A A Q+N N + + ++++D +G L P ++ L Y L ++ Sbjct: 696 ALDADQKNANALGNYAVFLNNIRHDYDQGERYYKKALDADPNHANTLGNYASFLHTIRHA 755
Query: 400 NKEAEESLRKAVEVDTDNSRAWQAYGEFLERTNNPKKAKEVYGEAYKHAAPKIAXXXXXX 579 +AE ++A+E D +++ + Y FL + EVY + A P A Sbjct: 756 YDQAEVYYKRALEADPNHANTLRNYALFLHIIRHAYDQAEVYYKRALEADPNHANNLGN- 814
Query: 580 XXXXXYAIFIQKSGEI-DKAEKLYKRIVTSGARSSESLGRYGLFLLEVKKDVEKGGIYLK 756 YA+F+Q D+AE YKR + + +++ +LG Y LFL ++ D ++ Y K Sbjct: 815 -----YALFLQDIRHAYDQAESYYKRGLEADPKNANNLGNYALFLNNIRHDYDQAETYYK 869
Query: 757 DAADIDPPSPEWCTRYSNYLKTYKKD 834 A ++DP S Y+++L T + D Sbjct: 870 RALEVDPKSANKLGNYAHFLITCRGD 895
Score = 62.4 bits (150), Expect = 3e-08 Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 2/182 (1%) Frame = +1
Query: 325 EGLQEQPQDSDLLAQYGVLL-SMEGKNKEAEESLRKAVEVDTDNSRAWQAYGEFLERTNN 501 + L+ P++++ L Y L ++ +AE ++A+E D +++ + Y FL + Sbjct: 485 QALEADPKNANALGNYASFLHTIRHAYDQAEAYYKRALEADPNHANTFGNYANFLCNIRH 544
Query: 502 PKKAKEVYGEAYKHAAPKIAXXXXXXXXXXXYAIFIQKSGEI-DKAEKLYKRIVTSGARS 678 EVY + A P A YA+F+ D+AE YKR + G Sbjct: 545 AYDQAEVYYKQALEADPNHANTLGN------YALFLHTIRHAYDQAETYYKRALEVGPNH 598
Query: 679 SESLGRYGLFLLEVKKDVEKGGIYLKDAADIDPPSPEWCTRYSNYLKTYKKDEFEATKYQ 858 + +LG Y FL +++ ++ Y K A + DP + Y+N+L + +A Y Sbjct: 599 ANNLGNYASFLHDIRHAYDQAEAYYKRALEADPKNVVTLGNYANFLCNIRHAYDQAEVYY 658
Query: 859 KR 864 +R Sbjct: 659 RR 660
Score = 62.0 bits (149), Expect = 3e-08 Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 3/193 (1%) Frame = +1
Query: 295 TDLSLKNDII-EGLQEQPQDSDLLAQYGVLL-SMEGKNKEAEESLRKAVEVDTDNSRAWQ 468 TD+ K+ I EG+ + PQD++LL Y L ++ +AE ++A+E D N+ Sbjct: 369 TDIDKKDKIYQEGIAKYPQDANLLGDYANFLHTIRHDYDQAEMYYKQALEADPKNAITLG 428
Query: 469 AYGEFLERTNNPKKAKEVYGEAYKHAAPKIAXXXXXXXXXXXYAIFIQKSGEI-DKAEKL 645 Y FL NN + A Y +A ++ + YA F+ D+AE Sbjct: 429 NYAVFL---NNIRHA---YDQAERYYKQALEADPNHANTLGNYANFLCNIRHAYDQAEVY 482
Query: 646 YKRIVTSGARSSESLGRYGLFLLEVKKDVEKGGIYLKDAADIDPPSPEWCTRYSNYLKTY 825 YK+ + + +++ +LG Y FL ++ ++ Y K A + DP Y+N+L Sbjct: 483 YKQALEADPKNANALGNYASFLHTIRHAYDQAEAYYKRALEADPNHANTFGNYANFLCNI 542
Query: 826 KKDEFEATKYQKR 864 + +A Y K+ Sbjct: 543 RHAYDQAEVYYKQ 555
Score = 60.1 bits (144), Expect = 1e-07 Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 2/182 (1%) Frame = +1
Query: 325 EGLQEQPQDSDLLAQYGVLLS-MEGKNKEAEESLRKAVEVDTDNSRAWQAYGEFLERTNN 501 + L ++++ L Y V L+ + + E +KA++ D +++ Y FL + Sbjct: 695 KALDADQKNANALGNYAVFLNNIRHDYDQGERYYKKALDADPNHANTLGNYASFLHTIRH 754
Query: 502 PKKAKEVYGEAYKHAAPKIAXXXXXXXXXXXYAIFIQKSGEI-DKAEKLYKRIVTSGARS 678 EVY + A P A YA+F+ D+AE YKR + + Sbjct: 755 AYDQAEVYYKRALEADPNHANTLRN------YALFLHIIRHAYDQAEVYYKRALEADPNH 808
Query: 679 SESLGRYGLFLLEVKKDVEKGGIYLKDAADIDPPSPEWCTRYSNYLKTYKKDEFEATKYQ 858 + +LG Y LFL +++ ++ Y K + DP + Y+ +L + D +A Y Sbjct: 809 ANNLGNYALFLQDIRHAYDQAESYYKRGLEADPKNANNLGNYALFLNNIRHDYDQAETYY 868
Query: 859 KR 864 KR Sbjct: 869 KR 870
Score = 49.3 bits (116), Expect = 2e-04 Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 10/175 (5%) Frame = +1
Query: 331 LQEQPQDSDLLAQYGVLLSM-EGKNKEAEESLRKAVEVDTDNSRAWQAYGEFLERTNNPK 507 L+ P ++ L Y + L + +AE ++A+E D +++ Y FL+ + Sbjct: 767 LEADPNHANTLRNYALFLHIIRHAYDQAEVYYKRALEADPNHANNLGNYALFLQDIRHAY 826
Query: 508 KAKEVYGEAYKHAAPKIAXXXXXXXXXXXYAIFIQK-SGEIDKAEKLYKRIVTSGARSSE 684 E Y + A PK A YA+F+ + D+AE YKR + +S+ Sbjct: 827 DQAESYYKRGLEADPKNANNLGN------YALFLNNIRHDYDQAETYYKRALEVDPKSAN 880
Query: 685 SLGRYGLFLLEVKKDVEKGGIYLKDA---ADIDPPSPE-----WCTRYSNYLKTY 825 LG Y FL+ + D ++ ++ A AD D + W RY++Y + + Sbjct: 881 KLGNYAHFLITCRGDFKRADSLIQQAFENADNDEETKPLQAKLWFYRYAHYYEEW 935
Score = 43.5 bits (101), Expect = 0.012 Identities = 22/90 (24%), Positives = 43/90 (47%) Frame = +1
Query: 595 YAIFIQKSGEIDKAEKLYKRIVTSGARSSESLGRYGLFLLEVKKDVEKGGIYLKDAADID 774 Y + +IDK +K+Y+ + + + LG Y FL ++ D ++ +Y K A + D Sbjct: 361 YLFDANQETDIDKKDKIYQEGIAKYPQDANLLGDYANFLHTIRHDYDQAEMYYKQALEAD 420
Query: 775 PPSPEWCTRYSNYLKTYKKDEFEATKYQKR 864 P + Y+ +L + +A +Y K+ Sbjct: 421 PKNAITLGNYAVFLNNIRHAYDQAERYYKQ 450
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3236559 Number of Hits to DB: 959,798,231 Number of extensions: 15026849 Number of successful extensions: 44518 Number of sequences better than 10.0: 312 Number of HSP's gapped: 44356 Number of HSP's successfully gapped: 378 Length of query: 345 Length of database: 1,051,180,864 Length adjustment: 129 Effective length of query: 216 Effective length of database: 633,664,753 Effective search space: 136871586648 Effective search space used: 136871586648 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 32 (16.9 bits)
|
PSORT |
|
VS (DIR, S) |
0 |
VH (FL, L) |
0 |
VF (FL, S) |
0 |
AH (FL, L) |
0 |
AF (FL, S) |
0 |
SL (DIR, L) |
0 |
SS (DIR, S) |
3 |
SH (FL, L) |
0 |
SF (FL, S) |
0 |
CH (FL, L) |
0 |
CF (FL, S) |
0 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
0 |
FC-IC (SUB) |
0 |