Contig-U12990-1
Contig ID Contig-U12990-1
Contig update 2002.12.18
Contig sequence
>Contig-U12990-1 (Contig-U12990-1Q) /CSM_Contig/Contig-U12990-1Q.Seq.d
NNNNNNNNNNGTTAAAATACCATCGAAAAGAAATGCTCATTGTTCAGTTT
TCGATGGATTAAGATACATTTATTTAATTGGTGGTGCTGATAGAGATAGT
AGTAAATTATTGGAAAGATTTGATATTGAAACTCAACAATGGACTAAACT
AGCATCCATGAAATTCGGTCGTAGTTATTTCAATGCTTTCTATCACCCTA
CTAAAAGATGTATTTACGTATTGGATGGCTATGTTAATAAAGACAAGAAA
TCCTCTGTTGAAATGTACTCACTTGAAAAGAATCAGTGGAGTGTGATTTG
TGAGATAAATCAACCAAGATATCTTAGTGGTGTCTCATTTGATGGTTCAA
AATATATAAATATAATTGGTGGTGTTGATAGATCAAACTCTCGGTNATAT
TANAACTATGGNAAGATTTGATACNTCNACTCATAAATGGGAAANNNTAA
ATAATGANCCAGAATCATTNCTATCTCATANTTCAAGTTCAATGAATNTA
ATGGTAGTTCAATCNCCACAATTAAAGAAAAATAATTCATTTTCTTCAAT
TTCTTCTCATTCATCTTTAAATTNTNTAATNCTTCATTNTTNGATGGTGA
ACAATTCATTTTTTTCTACGGTATAAATATTGATGAACATGGTCCACTNT
TACTATAAATTTAGTATAAAAACNAAGAAATTTGAAAAGATNCCAATCGA
TAATA

Gap no gap
Contig length 705
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 106092
End point 106787
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U12990
List of clone(s)

est1=CHG726Z,1,696
Translated Amino Acid sequence
XXXVKIPSKRNAHCSVFDGLRYIYLIGGADRDSSKLLERFDIETQQWTKLASMKFGRSYF
NAFYHPTKRCIYVLDGYVNKDKKSSVEMYSLEKNQWSVICEINQPRYLSGVSFDGSKYIN
IIGGVDRSNSRXYXNYGKI*yxxs*mgxxk**xriixisxfkfnexngssixtikek*fi
ffnffsfifkxxnxsxxdgeqfiffyginidehgplll*i*yknxei*kdxnr*


Translated Amino Acid sequence (All Frames)
Frame A:
xxxx*ntiekkcslfsfrwikihlfnwwc**r***iigki*y*nstmd*tsiheirs*lf
qcflspy*kmylrigwlc**rqeilc*nvlt*kesvecdl*dkstkis*wcli*wfkiyk
ynwwc**iklsvilxlwxdlixxlingkx*imxqnhxylixqvq*x*w*fnxhn*rkiih
flqfllihl*ix*xfixxw*tihfflryky**twstxtinlv*kxrnlkrxqsii


Frame B:
XXXVKIPSKRNAHCSVFDGLRYIYLIGGADRDSSKLLERFDIETQQWTKLASMKFGRSYF
NAFYHPTKRCIYVLDGYVNKDKKSSVEMYSLEKNQWSVICEINQPRYLSGVSFDGSKYIN
IIGGVDRSNSRXYXNYGKI*yxxs*mgxxk**xriixisxfkfnexngssixtikek*fi
ffnffsfifkxxnxsxxdgeqfiffyginidehgplll*i*yknxei*kdxnr*


Frame C:
xxxlkyhrkemlivqfsmd*dtfi*lvvlieivvnywkdlilklnngln*hp*nsvvvis
mlsitllkdvftywmamliktrnpllkcthlkrisgv*fvr*inqdilvvshlmvqni*i
*lvvlidqtlgxixtmxrfdtsthkwexxnnxpesxlshxsssmnxmvvqspqlkknnsf
ssisshsslnxxxlhxxmvnnsffstv*ilmnmvhxyykfsiktkkfekxpidn


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U12990-1 (Contig-U12990-1Q)
/CSM_Contig/Contig-U12990-1Q.Seq.d
(705 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U12990-1 (Contig-U12990-1Q) /CSM_Contig/Conti... 1211 0.0
Contig-U11366-1 (Contig-U11366-1Q) /CSM_Contig/Conti... 1015 0.0
Contig-U11242-1 (Contig-U11242-1Q) /CSM_Contig/Conti... 40 0.003
Contig-U08208-1 (Contig-U08208-1Q) /CSM_Contig/Conti... 40 0.003
Contig-U11908-1 (Contig-U11908-1Q) /CSM_Contig/Conti... 36 0.049
Contig-U05253-1 (Contig-U05253-1Q) /CSM_Contig/Conti... 36 0.049
Contig-U14298-1 (Contig-U14298-1Q) /CSM_Contig/Conti... 34 0.20
Contig-U12181-1 (Contig-U12181-1Q) /CSM_Contig/Conti... 34 0.20
Contig-U11851-1 (Contig-U11851-1Q) /CSM_Contig/Conti... 34 0.20
Contig-U04396-1 (Contig-U04396-1Q) /CSM_Contig/Conti... 30 3.0

>Contig-U12990-1 (Contig-U12990-1Q) /CSM_Contig/Contig-U12990-1Q.Seq.d
Length = 705

Score = 1211 bits (611), Expect = 0.0
Identities = 688/695 (98%)
Strand = Plus / Plus


Query: 11 gttaaaataccatcgaaaagaaatgctcattgttcagttttcgatggattaagatacatt 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gttaaaataccatcgaaaagaaatgctcattgttcagttttcgatggattaagatacatt 70


Query: 71 tatttaattggtggtgctgatagagatagtagtaaattattggaaagatttgatattgaa 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tatttaattggtggtgctgatagagatagtagtaaattattggaaagatttgatattgaa 130


Query: 131 actcaacaatggactaaactagcatccatgaaattcggtcgtagttatttcaatgctttc 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 actcaacaatggactaaactagcatccatgaaattcggtcgtagttatttcaatgctttc 190


Query: 191 tatcaccctactaaaagatgtatttacgtattggatggctatgttaataaagacaagaaa 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tatcaccctactaaaagatgtatttacgtattggatggctatgttaataaagacaagaaa 250


Query: 251 tcctctgttgaaatgtactcacttgaaaagaatcagtggagtgtgatttgtgagataaat 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tcctctgttgaaatgtactcacttgaaaagaatcagtggagtgtgatttgtgagataaat 310


Query: 311 caaccaagatatcttagtggtgtctcatttgatggttcaaaatatataaatataattggt 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 caaccaagatatcttagtggtgtctcatttgatggttcaaaatatataaatataattggt 370


Query: 371 ggtgttgatagatcaaactctcggtnatattanaactatggnaagatttgatacntcnac 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ggtgttgatagatcaaactctcggtnatattanaactatggnaagatttgatacntcnac 430


Query: 431 tcataaatgggaaannntaaataatganccagaatcattnctatctcatanttcaagttc 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tcataaatgggaaannntaaataatganccagaatcattnctatctcatanttcaagttc 490


Query: 491 aatgaatntaatggtagttcaatcnccacaattaaagaaaaataattcattttcttcaat 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aatgaatntaatggtagttcaatcnccacaattaaagaaaaataattcattttcttcaat 550


Query: 551 ttcttctcattcatctttaaattntntaatncttcattnttngatggtgaacaattcann 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ttcttctcattcatctttaaattntntaatncttcattnttngatggtgaacaattcatt 610


Query: 611 nnnnnctacggtataaatattgatgaacatggtccactnttactataaatttagtataaa 670
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tttttctacggtataaatattgatgaacatggtccactnttactataaatttagtataaa 670


Query: 671 aacnaagaaatttgaaaagatnccaatcgataata 705
|||||||||||||||||||||||||||||||||||
Sbjct: 671 aacnaagaaatttgaaaagatnccaatcgataata 705


>Contig-U11366-1 (Contig-U11366-1Q) /CSM_Contig/Contig-U11366-1Q.Seq.d
Length = 1878

Score = 1015 bits (512), Expect = 0.0
Identities = 548/563 (97%), Gaps = 1/563 (0%)
Strand = Plus / Plus


Query: 11 gttaaaataccatcgaaaagaaatgctcattgttcagttttcgatggattaagatacatt 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 gttaaaataccatcgaaaagaaatgctcattgttcagttttcgatggattaagatacatt 1073


Query: 71 tatttaattggtggtgctgatagagatagtagtaaattattggaaagatttgatattgaa 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1074 tatttaattggtggtgctgatagagatagtagtaaattattggaaagatttgatattgaa 1133


Query: 131 actcaacaatggactaaactagcatccatgaaattcggtcgtagttatttcaatgctttc 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1134 actcaacaatggactaaactagcatccatgaaattcggtcgtagttatttcaatgctttc 1193


Query: 191 tatcaccctactaaaagatgtatttacgtattggatggctatgttaataaagacaagaaa 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1194 tatcaccctactaaaagatgtatttacgtattggatggctatgttaataaagacaagaaa 1253


Query: 251 tcctctgttgaaatgtactcacttgaaaagaatcagtggagtgtgatttgtgagataaat 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1254 tcctctgttgaaatgtactcacttgaaaagaatcagtggagtgtgatttgtgagataaat 1313


Query: 311 caaccaagatatcttagtggtgtctcatttgatggttcaaaatatataaatataattggt 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1314 caaccaagatatcttagtggtgtctcatttgatggttcaaaatatataaatataattggt 1373


Query: 371 ggtgttgatagatcaaactctcggtnatattanaactatggnaagatttgatacntcnac 430
|||||||||||||||||||||| || |||||| |||||||| |||||||||||| || ||
Sbjct: 1374 ggtgttgatagatcaaactctc-gtgatattaaaactatggaaagatttgatacatcaac 1432


Query: 431 tcataaatgggaaannntaaataatganccagaatcattnctatctcatanttcaagttc 490
|||||||||||||| |||||||||| ||| ||||||| |||||||||| |||||||||
Sbjct: 1433 tcataaatgggaaatactaaataatgaaccaaaatcattactatctcatacttcaagttc 1492


Query: 491 aatgaatntaatggtagttcaatcnccacaattaaagaaaaataattcattttcttcaat 550
||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1493 aatgaatttaatggtagttcaatcaccacaattaaagaaaaataattcattttcttcaat 1552


Query: 551 ttcttctcattcatctttaaatt 573
|||||||||||||||||||||||
Sbjct: 1553 ttcttctcattcatctttaaatt 1575


Score = 157 bits (79), Expect = 2e-38
Identities = 119/136 (87%), Gaps = 1/136 (0%)
Strand = Plus / Plus


Query: 570 aattntntaatncttcattnttngatggtgaacaattcannnnnnnctacggtataaata 629
|||| | |||| ||||||| || |||||||||||||||| ||| ||||||||||
Sbjct: 1651 aattctttaatacttcattttttgatggtgaacaattcatttttttctatggtataaata 1710


Query: 630 ttgatgaacatggtccactnttactataaatttagtataaaaacnaagaaatttgaaaag 689
||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||
Sbjct: 1711 ttgatgaacatggtccactctta-tataaatttagtataaaaacaaagaaatttgaaaag 1769


Query: 690 atnccaatcgataata 705
|| |||||||||||||
Sbjct: 1770 attccaatcgataata 1785


>Contig-U11242-1 (Contig-U11242-1Q) /CSM_Contig/Contig-U11242-1Q.Seq.d
Length = 1925

Score = 40.1 bits (20), Expect = 0.003
Identities = 20/20 (100%)
Strand = Plus / Minus


Query: 536 ttcattttcttcaatttctt 555
||||||||||||||||||||
Sbjct: 891 ttcattttcttcaatttctt 872


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8805
Number of Sequences: 6905
Number of extensions: 8805
Number of successful extensions: 1062
Number of sequences better than 10.0: 127
length of query: 705
length of database: 5,674,871
effective HSP length: 16
effective length of query: 689
effective length of database: 5,564,391
effective search space: 3833865399
effective search space used: 3833865399
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.12. 4
Homology vs DNA
Query= Contig-U12990-1 (Contig-U12990-1Q) /CSM_Contig/Contig-U12990-1Q.Seq.d
(705 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ379562) Dictyostelium discoideum cDNA clone:ddc35d07, 3' ... 1076 0.0 2
(BJ403291) Dictyostelium discoideum cDNA clone:dds24l16, 3' ... 757 0.0 6
(BJ341670) Dictyostelium discoideum cDNA clone:dda7m14, 3' e... 757 0.0 6
(BJ354303) Dictyostelium discoideum cDNA clone:dda53n05, 3' ... 672 0.0 6
(BJ385331) Dictyostelium discoideum cDNA clone:ddc54i16, 3' ... 684 0.0 6
(BJ354664) Dictyostelium discoideum cDNA clone:dda54h12, 3' ... 599 0.0 5
(BJ386238) Dictyostelium discoideum cDNA clone:ddc57g15, 3' ... 609 0.0 6
(BJ352649) Dictyostelium discoideum cDNA clone:dda47o11, 3' ... 509 0.0 7
(BJ400461) Dictyostelium discoideum cDNA clone:dds13j12, 3' ... 504 0.0 5
(BJ405769) Dictyostelium discoideum cDNA clone:dds32m23, 3' ... 498 0.0 6
(BJ342889) Dictyostelium discoideum cDNA clone:dda15d12, 3' ... 486 0.0 5
(BJ371845) Dictyostelium discoideum cDNA clone:ddc1p17, 3' e... 428 0.0 6
(BJ377703) Dictyostelium discoideum cDNA clone:ddc25b16, 3' ... 371 0.0 5
(BJ356665) Dictyostelium discoideum cDNA clone:dda61e06, 3' ... 329 0.0 5
(BJ351988) Dictyostelium discoideum cDNA clone:dda45c11, 3' ... 502 0.0 3
(C92538) Dictyostelium discoideum slug cDNA, clone SSE587. 278 0.0 5
(BJ377799) Dictyostelium discoideum cDNA clone:ddc26a03, 3' ... 272 e-175 5
(BJ357032) Dictyostelium discoideum cDNA clone:dda62a09, 3' ... 262 e-155 6
(BJ354540) Dictyostelium discoideum cDNA clone:dda53o19, 3' ... 377 e-151 5
(BJ363191) Dictyostelium discoideum cDNA clone:ddc25b16, 5' ... 434 e-117 1
(AU037178) Dictyostelium discoideum slug cDNA, clone SSB573. 228 3e-94 4
(BJ358477) Dictyostelium discoideum cDNA clone:ddc1p17, 5' e... 168 2e-37 1
(AF250284) Amsacta moorei entomopoxvirus, complete genome. 36 0.009 7
(CE045211) tigr-gss-dog-17000351244680 Dog Library Canis lup... 50 0.11 1
(EC820335) SME00003072 esmbsro2 Sawyeria marylandensis cDNA,... 42 0.64 2
(AL662861) Zebrafish DNA sequence from clone RP71-1H5. 46 1.8 1
(AL627126) Zebrafish DNA sequence from clone RP71-1J21. 46 1.8 1
(AC171325) Mus musculus chromosome 3, clone RP23-124B15, com... 46 1.8 1
(AC171315) Mus musculus chromosome 3, clone RP23-240N19, com... 46 1.8 1
(AC116370) Mus musculus chromosome 3, clone RP24-113D8, comp... 46 1.8 1
(AM460536) Vitis vinifera, whole genome shotgun sequence, co... 46 1.8 1
(AM427657) Vitis vinifera contig VV78X012071.7, whole genome... 46 1.8 1
(AM423896) Vitis vinifera contig VV78X255676.6, whole genome... 46 1.8 1
(AC130412) Homo sapiens chromosome 3 clone RP11-21C11, *** S... 46 1.8 1
(AC105154) Mus musculus chromosome 3 clone RP24-156F7 map 3,... 46 1.8 1
(CU914360) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.8 1
(AC189288) Brassica rapa subsp. pekinensis clone KBrB025K04,... 46 1.8 1
(AC171629) Mus musculus chromosome 3 clone RP23-231C23 map 3... 46 1.8 1
(AC171327) Mus musculus chromosome 3 clone RP24-275L2 map 3,... 46 1.8 1
(EK150415) 1095456048396 Global-Ocean-Sampling_GS-31-01-01-1... 46 1.8 1
(EK147337) 1095456028220 Global-Ocean-Sampling_GS-31-01-01-1... 46 1.8 1
(CL101655) ISB1-38O11_T7.1 ISB1 Xenopus (Silurana) tropicali... 46 1.8 1
(BW305396) Ciona intestinalis cDNA, clone:ciht010f01, 5' end... 46 1.8 1
(BW035813) Ciona intestinalis cDNA, clone:cibd029o01, 5' end... 46 1.8 1
(CT077739) Sus scrofa genomic clone CH242-71O10, genomic sur... 38 2.7 2
(AC181641) Strongylocentrotus purpuratus clone R3-1103G14, W... 40 3.3 4
(BH946700) obu84h03.b1 B.oleracea002 Brassica oleracea genom... 38 3.7 2
(EX381804) GQ03303.SP6_M12 GQ033 - Terminal leader (Normaliz... 32 4.7 2
(EX381461) GQ03303.B7_M12 GQ033 - Terminal leader (Normalize... 32 4.7 2
(AM457970) Vitis vinifera, whole genome shotgun sequence, co... 38 5.0 3
(AX413017) Sequence 8 from Patent WO0228891. 34 5.2 4
(AJ223323) Saccharomyces cerevisiae mitochondrial tRNA-Tyr, ... 32 5.9 3
(AL929504) Zebrafish DNA sequence from clone CH211-155A11 in... 40 6.0 5
(AC201422) Strongylocentrotus purpuratus clone R3-20M8, WORK... 44 6.3 3
(AL772387) Mouse DNA sequence from clone RP23-133B16 on chro... 44 7.0 1
(AC188058) Callithrix jacchus chromosome UNK clone CH259-52H... 44 7.0 1
(AL354803) Human DNA sequence from clone RP11-539I23 on chro... 44 7.0 1
(AL137245) Human DNA sequence from clone RP11-196I2 on chrom... 44 7.0 1
(AC010482) Homo sapiens chromosome 5 clone CTD-2318J2, compl... 44 7.0 1
(AC008876) Homo sapiens chromosome 5 clone CTD-2201P10, comp... 44 7.0 1
(AC008568) Homo sapiens chromosome 5 clone CTC-546K23, compl... 44 7.0 1
(AC158844) Bos taurus clone CH240-360F4, WORKING DRAFT SEQUE... 44 7.0 1
(AC131841) Rattus norvegicus clone CH230-43B16, *** SEQUENCI... 44 7.0 1
(AC128953) Rattus norvegicus clone CH230-505N21, WORKING DRA... 44 7.0 1
(AC123329) Rattus norvegicus clone CH230-274A22, *** SEQUENC... 44 7.0 1
(AC119335) Rattus norvegicus clone CH230-239K16, *** SEQUENC... 44 7.0 1
(AC113437) Mus musculus clone RP23-52M6, LOW-PASS SEQUENCE S... 44 7.0 1
(AC109295) Mus musculus clone RP24-237F4, WORKING DRAFT SEQU... 44 7.0 1
(AC101199) Mus musculus clone RP23-177P1, LOW-PASS SEQUENCE ... 44 7.0 1
(CU694740) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 7.0 1
(AC231698) Choloepus hoffmanni clone CH281-350F10, WORKING D... 44 7.0 1
(AC184319) Strongylocentrotus purpuratus clone R3-4005G4, WO... 44 7.0 1
(AC179260) Strongylocentrotus purpuratus clone R3-42O21, WOR... 44 7.0 1
(AC016806) Homo sapiens clone RP11-8N3, WORKING DRAFT SEQUEN... 44 7.0 1
(AC008487) Homo sapiens chromosome 5 clone CTC-422M17, WORKI... 44 7.0 1
(AZ687542) ENTGX45TR Entamoeba histolytica Sheared DNA Entam... 44 7.0 1
(AZ684701) ENTMA78TR Entamoeba histolytica Sheared DNA Entam... 44 7.0 1
(AZ240428) RPCI-23-87N3.TV RPCI-23 Mus musculus genomic clon... 44 7.0 1
(FI184633) MUGQ_CH252P025N10Sp6_GL380_035 CHORI-252 Vervet M... 44 7.0 1
(FH854042) OSB_1270003xb21r1.ab1 OSB_1270 Nicotiana tabacum ... 44 7.0 1
(FH853986) OSB_1270003xm15r1.ab1 OSB_1270 Nicotiana tabacum ... 44 7.0 1
(EJ074549) 1095458111718 Global-Ocean-Sampling_GS-26-01-01-1... 44 7.0 1
(ED007197) MUGQ_CH252P091H13T7_CP132_057 CHORI-252 Vervet Mo... 44 7.0 1
(DX815496) MUGQ_CH252P063E10Sp6_AV1111_043 CHORI-252 Vervet ... 44 7.0 1
(DX532712) GH_MBb0090P07f GH_MBb Gossypium hirsutum genomic ... 44 7.0 1
(DH000563) Oryzias latipes Fosmid clone:GOLWFno0_n23, forwar... 44 7.0 1
(CU242822) Equus caballus GSS, BAC clone CH241-388J11, T7 en... 44 7.0 1
(AG672036) Macaca fuscata fuscata DNA, clone: MSB2-096N11_R,... 44 7.0 1
(AG617299) Macaca fuscata fuscata DNA, clone: MSB2-008M21_F,... 44 7.0 1
(EC824768) SME00001925 esmbsro2 Sawyeria marylandensis cDNA,... 44 7.0 1
(DY677277) TT1AR34TV Tetrahymena thermophila EST library str... 44 7.0 1
(CD419019) ri80c06.y1 Meloidogyne chitwoodi J2 pDNR LIB Melo... 44 7.0 1
(CB803979) AMGNNUC:SRPG2-00010-E9-A srpg2 (10238) Rattus nor... 44 7.0 1
(BJ900248) Oryzias latipes cDNA clone:MF01ASD040m19, 3' end. 44 7.0 1
(BJ531697) Oryzias latipes cDNA clone:MF01SSB011K12, 3' end ... 44 7.0 1
(FG476409) 020909KALA007341HT (KALA) Dormant kiwifruit buds ... 44 7.0 1
(FG454064) 021007KAIA007719HT (KAIA) Actinidia chinensis rip... 44 7.0 1
(FG409969) 020923KAAA009381HT (KAAA) A. deliciosa developing... 44 7.0 1
(AC069515) Homo sapiens chromosome 3 clone RP11-20F9, WORKIN... 42 7.1 3
(AC169241) Bos taurus clone CH240-262D9, WORKING DRAFT SEQUE... 34 7.7 6

>(BJ379562) Dictyostelium discoideum cDNA clone:ddc35d07, 3' end,
single read.
Length = 696

Score = 1076 bits (543), Expect(2) = 0.0
Identities = 597/597 (100%)
Strand = Plus / Minus


Query: 12 ttaaaataccatcgaaaagaaatgctcattgttcagttttcgatggattaagatacattt 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 ttaaaataccatcgaaaagaaatgctcattgttcagttttcgatggattaagatacattt 636


Query: 72 atttaattggtggtgctgatagagatagtagtaaattattggaaagatttgatattgaaa 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 atttaattggtggtgctgatagagatagtagtaaattattggaaagatttgatattgaaa 576


Query: 132 ctcaacaatggactaaactagcatccatgaaattcggtcgtagttatttcaatgctttct 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 ctcaacaatggactaaactagcatccatgaaattcggtcgtagttatttcaatgctttct 516


Query: 192 atcaccctactaaaagatgtatttacgtattggatggctatgttaataaagacaagaaat 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 atcaccctactaaaagatgtatttacgtattggatggctatgttaataaagacaagaaat 456


Query: 252 cctctgttgaaatgtactcacttgaaaagaatcagtggagtgtgatttgtgagataaatc 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cctctgttgaaatgtactcacttgaaaagaatcagtggagtgtgatttgtgagataaatc 396


Query: 312 aaccaagatatcttagtggtgtctcatttgatggttcaaaatatataaatataattggtg 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aaccaagatatcttagtggtgtctcatttgatggttcaaaatatataaatataattggtg 336


Query: 372 gtgttgatagatcaaactctcggtnatattanaactatggnaagatttgatacntcnact 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gtgttgatagatcaaactctcggtnatattanaactatggnaagatttgatacntcnact 276


Query: 432 cataaatgggaaannntaaataatganccagaatcattnctatctcatanttcaagttca 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 cataaatgggaaannntaaataatganccagaatcattnctatctcatanttcaagttca 216


Query: 492 atgaatntaatggtagttcaatcnccacaattaaagaaaaataattcattttcttcaatt 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atgaatntaatggtagttcaatcnccacaattaaagaaaaataattcattttcttcaatt 156


Query: 552 tcttctcattcatctttaaattntntaatncttcattnttngatggtgaacaattca 608
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 tcttctcattcatctttaaattntntaatncttcattnttngatggtgaacaattca 99

Score = 161 bits (81), Expect(2) = 0.0
Identities = 90/90 (100%)
Strand = Plus / Minus


Query: 616 ctacggtataaatattgatgaacatggtccactnttactataaatttagtataaaaacna 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 ctacggtataaatattgatgaacatggtccactnttactataaatttagtataaaaacna 32


Query: 676 agaaatttgaaaagatnccaatcgataata 705
||||||||||||||||||||||||||||||
Sbjct: 31 agaaatttgaaaagatnccaatcgataata 2

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 749,119,912
Number of extensions: 47604608
Number of successful extensions: 4259510
Number of sequences better than 10.0: 104
Length of query: 705
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 681
Effective length of database: 97,308,875,965
Effective search space: 66267344532165
Effective search space used: 66267344532165
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7. 5
Homology vs Protein
Query= Contig-U12990-1 (Contig-U12990-1Q) /CSM_Contig/Contig-U12990-1Q.Seq.d
(705 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

BC071523_1(BC071523|pid:none) Danio rerio kelch-like 18 (Drosoph... 60 6e-08
BC045319_1(BC045319|pid:none) Danio rerio kelch-like 18 (Drosoph... 60 6e-08
BX323559_2(BX323559|pid:none) Zebrafish DNA sequence from clone ... 60 6e-08
BC077434_1(BC077434|pid:none) Xenopus laevis MGC82233 protein, m... 58 3e-07
(P57790) RecName: Full=Kelch-like ECH-associated protein 1; AltN... 57 4e-07
Z82059_7(Z82059|pid:none) Caenorhabditis elegans Cosmid T27E9, c... 56 1e-06
Z82059_8(Z82059|pid:none) Caenorhabditis elegans Cosmid T27E9, c... 56 1e-06
T25373(T25373)hypothetical protein T27E9.4 - Caenorhabditis eleg... 56 1e-06
AK046178_1(AK046178|pid:none) Mus musculus adult male corpora qu... 55 2e-06
AK136319_1(AK136319|pid:none) Mus musculus 15 days embryo male t... 55 2e-06
AK129061_1(AK129061|pid:none) Mus musculus mRNA for mKIAA0132 pr... 55 2e-06
AK295292_1(AK295292|pid:none) Homo sapiens cDNA FLJ61265 complet... 55 2e-06
BC016388_1(BC016388|pid:none) Homo sapiens kelch-like 18 (Drosop... 55 2e-06
AB018338_1(AB018338|pid:none) Homo sapiens mRNA for KIAA0795 pro... 55 2e-06
D50922_1(D50922|pid:none) Homo sapiens KIAA0132 mRNA, partial cds. 55 2e-06
BC021957_1(BC021957|pid:none) Homo sapiens kelch-like ECH-associ... 55 2e-06
(Q14145) RecName: Full=Kelch-like ECH-associated protein 1; AltN... 55 2e-06
BC151545_1(BC151545|pid:none) Bos taurus kelch-like ECH-associat... 55 2e-06
AK056204_1(AK056204|pid:none) Homo sapiens cDNA FLJ31642 fis, cl... 55 2e-06
AC116986_34(AC116986|pid:none) Dictyostelium discoideum chromoso... 55 3e-06
BC088917_1(BC088917|pid:none) Xenopus laevis hypothetical LOC496... 54 4e-06
BC167595_1(BC167595|pid:none) Xenopus tropicalis kelch-like 18, ... 54 4e-06
BC025563_1(BC025563|pid:none) Mus musculus kelch-like 18 (Drosop... 54 5e-06
AK077202_1(AK077202|pid:none) Mus musculus adult male testis cDN... 54 6e-06
(Q9D5V2) RecName: Full=Kelch-like protein 10; &AK014906_1(AK014... 54 6e-06
AK006288_1(AK006288|pid:none) Mus musculus adult male testis cDN... 54 6e-06
BC004092_1(BC004092|pid:none) Mus musculus influenza virus NS1A ... 54 6e-06
AK301797_1(AK301797|pid:none) Homo sapiens cDNA FLJ58296 complet... 53 1e-05
DQ977187_1(DQ977187|pid:none) Pan paniscus IVNS1ABP (IVNS1ABP) g... 53 1e-05
AK057224_1(AK057224|pid:none) Homo sapiens cDNA FLJ32662 fis, cl... 53 1e-05
(Q6JEL2) RecName: Full=Kelch-like protein 10; &AY495339_1(AY495... 53 1e-05
BC067753_1(BC067753|pid:none) Homo sapiens kelch-like 10 (Drosop... 53 1e-05
(Q5RG82) RecName: Full=Influenza virus NS1A-binding protein homo... 52 1e-05
BC163267_1(BC163267|pid:none) Danio rerio kelch repeat and BTB (... 52 1e-05
CU464125_3(CU464125|pid:none) Zebrafish DNA sequence from clone ... 52 1e-05
BC078427_1(BC078427|pid:none) Danio rerio kelch repeat and BTB (... 52 1e-05
AK001273_1(AK001273|pid:none) Homo sapiens cDNA FLJ10411 fis, cl... 52 1e-05
AJ720960_1(AJ720960|pid:none) Gallus gallus mRNA for hypothetica... 52 1e-05
AX877141_1(AX877141|pid:none) Sequence 12046 from Patent EP10746... 52 2e-05
AK093912_1(AK093912|pid:none) Homo sapiens cDNA FLJ36593 fis, cl... 52 2e-05
(Q9Y6Y0) RecName: Full=Influenza virus NS1A-binding protein; ... 52 2e-05
BC067739_1(BC067739|pid:none) Homo sapiens influenza virus NS1A ... 52 2e-05
AB020657_1(AB020657|pid:none) Homo sapiens mRNA for KIAA0850 pro... 52 2e-05
AB170721_1(AB170721|pid:none) Macaca fascicularis brain cDNA clo... 52 2e-05
AB173546_1(AB173546|pid:none) Macaca fascicularis brain cDNA clo... 52 2e-05
FJ905613_1(FJ905613|pid:none) Sus scrofa influenza virus NS1A bi... 52 2e-05
AK129229_1(AK129229|pid:none) Mus musculus mRNA for mKIAA0850 pr... 52 2e-05
(Q99KN0) RecName: Full=Influenza virus NS1A-binding protein homo... 52 2e-05
BC151597_1(BC151597|pid:none) Bos taurus kelch-like 18 (Drosophi... 52 2e-05
AK146001_1(AK146001|pid:none) Mus musculus 11 days pregnant adul... 52 2e-05
AK144835_1(AK144835|pid:none) Mus musculus lung RCB-0558 LLC cDN... 52 2e-05
AK159254_1(AK159254|pid:none) Mus musculus osteoclast-like cell ... 52 2e-05
DQ914523_1(DQ914523|pid:none) Mus musculus kelch family protein ... 52 2e-05
FN357292_65(FN357292|pid:none) Schistosoma mansoni genome sequen... 51 3e-05
AB271119_1(AB271119|pid:none) Danio rerio keap1b mRNA for nrf2-a... 51 3e-05
BC146253_1(BC146253|pid:none) Bos taurus kelch repeat and BTB (P... 51 4e-05
(Q5U504) RecName: Full=Kelch repeat and BTB domain-containing pr... 51 4e-05
BT021600_1(BT021600|pid:none) Bos taurus kelch repeat and BTB (P... 51 4e-05
(Q5F3N5) RecName: Full=Kelch-like protein 14; &AJ851615_1(AJ851... 50 5e-05
AB037805_1(AB037805|pid:none) Homo sapiens mRNA for KIAA1384 pro... 50 5e-05
BC054912_1(BC054912|pid:none) Danio rerio kelch repeat and BTB (... 50 5e-05
AF067946_5(AF067946|pid:none) Caenorhabditis elegans cosmid W02G... 50 5e-05
AK294996_1(AK294996|pid:none) Homo sapiens cDNA FLJ54416 complet... 50 5e-05
AB081315_1(AB081315|pid:none) Danio rerio keap1a mRNA for nrf2-a... 50 5e-05
FN357389_11(FN357389|pid:none) Schistosoma mansoni genome sequen... 50 5e-05
(Q9P2G3) RecName: Full=Kelch-like protein 14; &AB385461_1(AB385... 50 5e-05
AK316571_1(AK316571|pid:none) Homo sapiens cDNA, FLJ93742, highl... 50 5e-05
AF056929_1(AF056929|pid:none) Homo sapiens sarcosin mRNA, comple... 50 7e-05
DQ443529_1(DQ443529|pid:none) Homo sapiens clone ARA3 aryl hydro... 50 7e-05
AY364252_1(AY364252|pid:none) Homo sapiens clone peg2367 sarcome... 50 7e-05
(O60662) RecName: Full=Kelch repeat and BTB domain-containing pr... 50 7e-05
AC093899_2(AC093899|pid:none) Homo sapiens BAC clone RP11-724O16... 50 7e-05
FN357664_3(FN357664|pid:none) Schistosoma mansoni genome sequenc... 50 7e-05
CP000580_4680(CP000580|pid:none) Mycobacterium sp. JLS, complete... 50 7e-05
DQ443528_1(DQ443528|pid:none) Homo sapiens clone NS1BP/FLARA3 ar... 50 7e-05
AM910985_185(AM910985|pid:none) Plasmodium knowlesi strain H chr... 50 9e-05
BC063333_1(BC063333|pid:none) Xenopus tropicalis kelch repeat an... 50 9e-05
AK289855_1(AK289855|pid:none) Homo sapiens cDNA FLJ76338 complet... 50 9e-05
BC146233_1(BC146233|pid:none) Bos taurus kelch-like 28 (Drosophi... 50 9e-05
(Q7ZVQ8) RecName: Full=Influenza virus NS1A-binding protein homo... 50 9e-05
AY172949_1(AY172949|pid:none) Homo sapiens KLHL9 protein mRNA, c... 49 1e-04
BC157241_1(BC157241|pid:none) Xenopus tropicalis cDNA clone MGC:... 49 1e-04
AB179382_1(AB179382|pid:none) Macaca fascicularis testis cDNA cl... 49 1e-04
BC167576_1(BC167576|pid:none) Xenopus tropicalis hypothetical pr... 49 1e-04
AK131135_1(AK131135|pid:none) Mus musculus mRNA for mFLJ00127 pr... 49 2e-04
AK160799_1(AK160799|pid:none) Mus musculus 14, 17 days embryo he... 49 2e-04
DQ374997_1(DQ374997|pid:none) Oryza meridionalis clone hdgD918 K... 48 3e-04
AK068671_1(AK068671|pid:none) Oryza sativa Japonica Group cDNA c... 48 3e-04
AK022605_1(AK022605|pid:none) Homo sapiens cDNA FLJ12543 fis, cl... 48 3e-04
DQ375006_1(DQ375006|pid:none) Oryza sativa (japonica cultivar-gr... 48 3e-04
DQ374994_1(DQ374994|pid:none) Oryza barthii clone hdgD911 Kelch-... 48 3e-04
DQ375009_1(DQ375009|pid:none) Oryza sativa (indica cultivar-grou... 48 3e-04
BT066254_1(BT066254|pid:none) Zea mays full-length cDNA clone ZM... 48 3e-04
BC041384_1(BC041384|pid:none) Homo sapiens kelch-like 8 (Drosoph... 48 3e-04
(Q8N4N3) RecName: Full=Kelch-like protein 36; &BC033821_1(BC033... 48 3e-04
DQ375021_1(DQ375021|pid:none) Oryza rufipogon clone hdgD910 Kelc... 48 3e-04
(Q66HD2) RecName: Full=Kelch-like protein 36; &BC081914_1(BC081... 48 3e-04
DQ375007_1(DQ375007|pid:none) Oryza sativa (japonica cultivar-gr... 48 3e-04
AJ012449_1(AJ012449|pid:none) Homo sapiens mRNA for NS1-binding ... 48 3e-04
DQ375015_1(DQ375015|pid:none) Oryza rufipogon clone hdgD94 Kelch... 48 3e-04
(Q2T9Z7) RecName: Full=Kelch-like protein 9; &BC111192_1(BC1111... 48 3e-04
AL773552_2(AL773552|pid:none) Mouse DNA sequence from clone RP23... 48 3e-04
BC171039_1(BC171039|pid:none) Xenopus tropicalis giant axonal ne... 48 3e-04
AK023630_1(AK023630|pid:none) Homo sapiens cDNA FLJ13568 fis, cl... 48 3e-04
AL773552_3(AL773552|pid:none) Mouse DNA sequence from clone RP23... 48 3e-04
BC129525_1(BC129525|pid:none) Xenopus laevis hypothetical protei... 48 3e-04
AK122491_1(AK122491|pid:none) Mus musculus mRNA for mKIAA1309 pr... 48 3e-04
BC168717_1(BC168717|pid:none) Rattus norvegicus kelch-like 9 (Dr... 48 3e-04
(Q9P2J3) RecName: Full=Kelch-like protein 9; &AK091715_1(AK0917... 48 3e-04
AK049803_1(AK049803|pid:none) Mus musculus 12 days embryo spinal... 48 3e-04
AK129338_1(AK129338|pid:none) Mus musculus mRNA for mKIAA1354 pr... 48 3e-04
BC110491_1(BC110491|pid:none) Homo sapiens kelch repeat and BTB ... 47 4e-04
(Q2TBA0) RecName: Full=Kelch repeat and BTB domain-containing pr... 47 4e-04
(Q8CA72) RecName: Full=Gigaxonin; &BC165989_1(BC165989|pid:none) 47 4e-04
BC043951_1(BC043951|pid:none) Xenopus laevis hypothetical protei... 47 4e-04
AK300682_1(AK300682|pid:none) Homo sapiens cDNA FLJ51312 complet... 47 4e-04
AK039455_1(AK039455|pid:none) Mus musculus adult male spinal cor... 47 4e-04
(Q9CR40) RecName: Full=Kelch-like protein 28; AltName: Full=BTB/... 47 6e-04
AB037799_1(AB037799|pid:none) Homo sapiens mRNA for KIAA1378 pro... 47 6e-04
FN314076_1(FN314076|pid:none) Schistosoma japonicum isolate Anhu... 47 6e-04
AY172948_1(AY172948|pid:none) Homo sapiens KLHL5b protein mRNA, ... 47 6e-04
CP001032_1835(CP001032|pid:none) Opitutus terrae PB90-1, complet... 47 6e-04
(Q9P2G9) RecName: Full=Kelch-like protein 8; &AB385460_1(AB3854... 47 6e-04
CR749265_1(CR749265|pid:none) Homo sapiens mRNA; cDNA DKFZp781C1... 47 6e-04
BC041901_1(BC041901|pid:none) Homo sapiens kelch-like 8 (Drosoph... 47 6e-04
BX538173_1(BX538173|pid:none) Homo sapiens mRNA; cDNA DKFZp686P1... 47 6e-04
AE014297_2384(AE014297|pid:none) Drosophila melanogaster chromos... 47 7e-04
BT031345_1(BT031345|pid:none) Drosophila melanogaster RE34022 fu... 47 7e-04
AB208820_1(AB208820|pid:none) Homo sapiens mRNA for kelch-like 5... 47 7e-04
(Q04652) RecName: Full=Ring canal kelch protein; Contains: Rec... 47 7e-04
BT001720_1(BT001720|pid:none) Drosophila melanogaster RE68961 fu... 47 7e-04
AY060658_1(AY060658|pid:none) Drosophila melanogaster GH08610 fu... 47 7e-04
AE014297_2385(AE014297|pid:none) Drosophila melanogaster chromos... 47 7e-04
AE014134_3003(AE014134|pid:none) Drosophila melanogaster chromos... 47 7e-04
(Q9ER30) RecName: Full=Kelch repeat and BTB domain-containing pr... 47 7e-04
BC058884_1(BC058884|pid:none) Homo sapiens kelch-like 5 (Drosoph... 47 7e-04
(Q96PQ7) RecName: Full=Kelch-like protein 5; 47 7e-04
BC053860_1(BC053860|pid:none) Homo sapiens kelch-like 5 (Drosoph... 47 7e-04
AK289785_1(AK289785|pid:none) Homo sapiens cDNA FLJ77526 complet... 47 7e-04
AE014134_3002(AE014134|pid:none) Drosophila melanogaster chromos... 47 7e-04
BC160163_1(BC160163|pid:none) Synthetic construct Homo sapiens c... 47 7e-04
AK001698_1(AK001698|pid:none) Homo sapiens cDNA FLJ10836 fis, cl... 47 7e-04
AF123320_1(AF123320|pid:none) Homo sapiens lymphocyte activation... 46 0.001
BT058894_1(BT058894|pid:none) Salmo salar clone ssal-rgf-511-317... 46 0.001
AK095378_1(AK095378|pid:none) Homo sapiens cDNA FLJ38059 fis, cl... 46 0.001
(Q9H2C0) RecName: Full=Gigaxonin; AltName: Full=Kelch-like prote... 46 0.001
AF409138_147(AF409138|pid:none) Lumpy skin disease virus isolate... 46 0.001
AK001836_1(AK001836|pid:none) Homo sapiens cDNA FLJ10974 fis, cl... 46 0.001
AF409137_153(AF409137|pid:none) Lumpy skin disease virus NW-LW i... 46 0.001
AF325528_151(AF325528|pid:none) Lumpy skin disease virus NI-2490... 46 0.001
AC004021_1(AC004021|pid:none) Human PAC clone RP1-186K10 from 5q... 46 0.001
AY641809_1(AY641809|pid:none) Rattus norvegicus myocardial ische... 46 0.001
(Q9P2N7) RecName: Full=Kelch-like protein 13; AltName: Full=BTB ... 46 0.001
AK297523_1(AK297523|pid:none) Homo sapiens cDNA FLJ55342 complet... 46 0.001
AC006963_1(AC006963|pid:none) Homo sapiens PAC clone RP1-278D1 f... 46 0.001
AK122724_1(AK122724|pid:none) Homo sapiens cDNA FLJ16227 fis, cl... 46 0.001
(Q5REP9) RecName: Full=Kelch-like protein 3; &CR857470_1(CR8574... 46 0.001
AK296324_1(AK296324|pid:none) Homo sapiens cDNA FLJ56095 complet... 46 0.001
BC064576_1(BC064576|pid:none) Homo sapiens kelch-like 13 (Drosop... 46 0.001
BC150039_1(BC150039|pid:none) Bos taurus kelch-like 13 (Drosophi... 46 0.001
AK316509_1(AK316509|pid:none) Homo sapiens cDNA, FLJ79408 comple... 46 0.001
(Q9Y573) RecName: Full=Actin-binding protein IPP; AltName: Full=... 45 0.002
AM910994_107(AM910994|pid:none) Plasmodium knowlesi strain H chr... 45 0.002
BC150698_1(BC150698|pid:none) Mus musculus kelch repeat and BTB ... 45 0.002
BC032544_1(BC032544|pid:none) Homo sapiens intracisternal A part... 45 0.002
AL929083_4(AL929083|pid:none) Mouse DNA sequence from clone RP23... 45 0.002
AC157983_25(AC157983|pid:none) Medicago truncatula clone mth2-13... 45 0.002
CP000431_283(CP000431|pid:none) Rhodococcus jostii RHA1, complet... 45 0.002
BC024572_1(BC024572|pid:none) Mus musculus kelch-like 2, Mayven ... 45 0.003
CR762406_2(CR762406|pid:none) Zebrafish DNA sequence from clone ... 45 0.003
(Q8JZP3) RecName: Full=Kelch-like protein 2; &BC031142_1(BC0311... 45 0.003
BC149209_1(BC149209|pid:none) Bos taurus kelch-like 2, Mayven (D... 45 0.003
AF325528_144(AF325528|pid:none) Lumpy skin disease virus NI-2490... 45 0.003
AB209727_1(AB209727|pid:none) Homo sapiens mRNA for Kelch-like p... 45 0.003
BC057606_1(BC057606|pid:none) Mus musculus kelch-like 5 (Drosoph... 45 0.003
AK220397_1(AK220397|pid:none) Mus musculus mRNA for mKIAA1490 pr... 45 0.003
AK294336_1(AK294336|pid:none) Homo sapiens cDNA FLJ60241 complet... 45 0.003
(Q8BZM0) RecName: Full=Kelch-like protein 12; AltName: Full=CUL3... 45 0.003
AK032116_1(AK032116|pid:none) Mus musculus adult male medulla ob... 45 0.003
AL731554_3(AL731554|pid:none) Mouse DNA sequence from clone RP23... 45 0.003
AK220195_1(AK220195|pid:none) Mus musculus mRNA for mKIAA4221 pr... 45 0.003
AP011115_409(AP011115|pid:none) Rhodococcus opacus B4 DNA, compl... 45 0.003
(O95198) RecName: Full=Kelch-like protein 2; AltName: Full=Actin... 45 0.003
BC094584_1(BC094584|pid:none) Mus musculus kelch-like 1 (Drosoph... 45 0.003
AK223072_1(AK223072|pid:none) Homo sapiens mRNA for kelch-like 1... 44 0.004
AE013599_2949(AE013599|pid:none) Drosophila melanogaster chromos... 44 0.004
AF208069_1(AF208069|pid:none) Homo sapiens kelch-like protein KL... 44 0.004
AF208070_1(AF208070|pid:none) Homo sapiens kelch-like protein KL... 44 0.004
AE013599_2948(AE013599|pid:none) Drosophila melanogaster chromos... 44 0.004
(Q53G59) RecName: Full=Kelch-like protein 12; AltName: Full=CUL3... 44 0.004
AF409138_154(AF409138|pid:none) Lumpy skin disease virus isolate... 44 0.004
BT044263_1(BT044263|pid:none) Drosophila melanogaster FI06141 fu... 44 0.004
BT001347_1(BT001347|pid:none) Drosophila melanogaster AT24465 fu... 44 0.004
BC073388_1(BC073388|pid:none) Xenopus laevis MGC80829 protein, m... 44 0.004
(Q9JI74) RecName: Full=Kelch-like protein 1; &AF252281_1(AF2522... 44 0.005
BC046953_1(BC046953|pid:none) Xenopus laevis similar to ectoderm... 44 0.005
(Q5U374) RecName: Full=Kelch-like protein 12; &BC085673_1(BC085... 44 0.005
AC012188_10(AC012188|pid:none) Sequence of BAC F14L17 from Arabi... 44 0.005
(P32206) RecName: Full=Protein C13; &L22013_8(L22013|pid:none) 44 0.005
AF067219_16(AF067219|pid:none) Caenorhabditis elegans cosmid R12... 44 0.005
BC080910_1(BC080910|pid:none) Xenopus tropicalis MGC79538 protei... 44 0.005
(Q6NRH0) RecName: Full=Kelch-like protein 12; 44 0.006
BC070780_1(BC070780|pid:none) Xenopus laevis Kelch-like protein ... 44 0.006
AK131718_1(AK131718|pid:none) Mus musculus adult male testis cDN... 44 0.006
AK315541_1(AK315541|pid:none) Homo sapiens cDNA, FLJ96608, highl... 43 0.008
AB172652_1(AB172652|pid:none) Macaca fascicularis brain cDNA clo... 43 0.008
AK022649_1(AK022649|pid:none) Homo sapiens cDNA FLJ12587 fis, cl... 43 0.008
AF393973_1(AF393973|pid:none) Homo sapiens Kelch-like protein 1 ... 43 0.008
FN357506_3(FN357506|pid:none) Schistosoma mansoni genome sequenc... 43 0.008
(Q4KLM4) RecName: Full=Ectoderm-neural cortex protein 2; ... 43 0.008
(Q9H0H3) RecName: Full=Ectoderm-neural cortex protein 2; ... 43 0.008
AF272976_1(AF272976|pid:none) Homo sapiens kelch-like 5 protein ... 43 0.008
BC080381_1(BC080381|pid:none) Xenopus laevis MGC81691 protein, m... 43 0.008
AK295939_1(AK295939|pid:none) Homo sapiens cDNA FLJ52306 complet... 43 0.008
AM451940_1(AM451940|pid:none) Vitis vinifera contig VV78X199560.... 43 0.008
(Q9FZJ3) RecName: Full=Putative F-box/kelch-repeat protein At1g2... 43 0.008
AY689436_157(AY689436|pid:none) Deerpox virus W-848-83, complete... 43 0.008
BC022460_1(BC022460|pid:none) Homo sapiens kelch-like 1 (Drosoph... 43 0.008
BC141798_1(BC141798|pid:none) Danio rerio zgc:163008, mRNA (cDNA... 43 0.008
(Q9NR64) RecName: Full=Kelch-like protein 1; &AB384224_1(AB3842... 43 0.008
CP000388_747(CP000388|pid:none) Pseudoalteromonas atlantica T6c,... 43 0.011
T00693(T00693;G84874)hypothetical protein At2g44130 [imported] -... 43 0.011
AY088471_1(AY088471|pid:none) Arabidopsis thaliana clone 6950 mR... 43 0.011
(O80582) RecName: Full=F-box/kelch-repeat protein At2g44130; &A... 43 0.011
BX649183_1(BX649183|pid:none) Homo sapiens mRNA; cDNA DKFZp686K0... 42 0.014
DQ976970_3(DQ976970|pid:none) Saguinus labiatus IVNS1ABP (IVNS1A... 42 0.014
AL844506_243(AL844506|pid:none) Plasmodium falciparum 3D7 chromo... 42 0.014
(Q6TDP4) RecName: Full=Kelch-like protein 17; AltName: Full=Acti... 42 0.018
CR940347_731(CR940347|pid:none) Theileria annulata strain Ankara... 42 0.018
BT045254_1(BT045254|pid:none) Salmo salar clone ssal-rgf-516-270... 42 0.018
AJ577207_1(AJ577207|pid:none) Anopheles stephensi mRNA for putat... 42 0.024
AY216792_1(AY216792|pid:none) Xenopus laevis ectoderm neural cor... 41 0.031
(Q6DFF7) RecName: Full=Ectoderm-neural cortex protein 2; AltName... 41 0.031
EU599189_1(EU599189|pid:none) Rosa hybrid cultivar putative kelc... 41 0.031
AY139977_1(AY139977|pid:none) Arabidopsis thaliana predicted pro... 41 0.031
(Q8L736) RecName: Full=F-box/kelch-repeat protein SKIP11; AltNam... 41 0.031
AB172938_1(AB172938|pid:none) Macaca fascicularis brain cDNA clo... 41 0.031
AL831868_1(AL831868|pid:none) Homo sapiens mRNA; cDNA DKFZp761P1... 41 0.040
BC057137_1(BC057137|pid:none) Mus musculus kelch-like 4 (Drosoph... 41 0.040
AY088575_1(AY088575|pid:none) Arabidopsis thaliana clone 8014 mR... 41 0.040
AK044930_1(AK044930|pid:none) Mus musculus 9.5 days embryo parth... 41 0.040
AK061344_1(AK061344|pid:none) Oryza sativa Japonica Group cDNA c... 41 0.040
AK022715_1(AK022715|pid:none) Homo sapiens cDNA FLJ12653 fis, cl... 41 0.040
AB027612_1(AB027612|pid:none) Drosophila melanogaster mRNA for k... 41 0.040
CP001348_1068(CP001348|pid:none) Clostridium cellulolyticum H10,... 41 0.040
AF284766_1(AF284766|pid:none) Homo sapiens kelch-like protein KL... 41 0.040
AK300172_1(AK300172|pid:none) Homo sapiens cDNA FLJ50667 complet... 41 0.040
DQ976456_2(DQ976456|pid:none) Gorilla gorilla IVNS1ABP (IVNS1ABP... 41 0.040
AJ720145_1(AJ720145|pid:none) Gallus gallus mRNA for hypothetica... 41 0.040
BX005189_1(BX005189|pid:none) Mouse DNA sequence from clone RP23... 41 0.040
AK056457_1(AK056457|pid:none) Homo sapiens cDNA FLJ31895 fis, cl... 41 0.040
(Q9M1Y1) RecName: Full=F-box/kelch-repeat protein SKIP20; AltNam... 41 0.040
AK161786_1(AK161786|pid:none) Mus musculus 13 days embryo foreli... 41 0.040
(Q503R4) RecName: Full=Kelch-like protein 36; &BC095214_1(BC095... 40 0.053
AM746676_8660(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 40 0.053
CP001390_1598(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 40 0.069
AP006841_728(AP006841|pid:none) Bacteroides fragilis YCH46 DNA, ... 40 0.069
DQ976821_3(DQ976821|pid:none) Lemur catta IVNS1ABP (IVNS1ABP) ge... 40 0.069
AB169278_1(AB169278|pid:none) Macaca fascicularis testis cDNA, c... 40 0.069
I37216(I37216;S55466) calicin - human (fragment) &Z46967_1(Z469... 40 0.069
AE014298_3155(AE014298|pid:none) Drosophila melanogaster chromos... 40 0.069
FN357293_46(FN357293|pid:none) Schistosoma mansoni genome sequen... 40 0.090
S16442(S16442;S16443;S19092) MIPP protein - mouse &X58523_1(X58... 40 0.090
AK300755_1(AK300755|pid:none) Homo sapiens cDNA FLJ57439 complet... 39 0.12
BC029801_1(BC029801|pid:none) Mus musculus kelch-like 20 (Drosop... 39 0.12
EU955577_1(EU955577|pid:none) Zea mays clone 1537616 kelch motif... 39 0.12
AJ844466_1(AJ844466|pid:none) Homo sapiens partial mRNA for KLEI... 39 0.12
(Q5RGB8) RecName: Full=Kelch-like protein 26; &BX936438_4(BX936... 39 0.12
AB026190_1(AB026190|pid:none) Homo sapiens mRNA for Kelch motif ... 39 0.12
CP000113_5848(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 39 0.12
AL161946_18(AL161946|pid:none) Arabidopsis thaliana DNA chromoso... 39 0.12
AB171139_1(AB171139|pid:none) Macaca fascicularis brain cDNA clo... 39 0.12
(Q08DK3) RecName: Full=Kelch-like protein 20; &(Q8VCK5) RecName... 39 0.12
AK066661_1(AK066661|pid:none) Oryza sativa Japonica Group cDNA c... 39 0.15
AE014297_1480(AE014297|pid:none) Drosophila melanogaster chromos... 39 0.20
AF170722_18(AF170722|pid:none) Rabbit fibroma virus, complete ge... 39 0.20
AY247814_1(AY247814|pid:none) Arabidopsis thaliana hypothetical ... 39 0.20
AF336128_12(AF336128|pid:none) Lumpy skin disease virus strain N... 39 0.20
AF409138_19(AF409138|pid:none) Lumpy skin disease virus isolate ... 39 0.20
(Q84M94) RecName: Full=F-box/kelch-repeat protein At1g26930; &A... 39 0.20
(Q9ZW38) RecName: Full=F-box/kelch-repeat protein At2g29600; &A... 39 0.20
BC124287_1(BC124287|pid:none) Danio rerio kelch-like 26 (Drosoph... 39 0.20
(Q5XI58) RecName: Full=Calicin; &BC083832_1(BC083832|pid:none) 38 0.26
BC026739_1(BC026739|pid:none) Mus musculus kelch-like 5 (Drosoph... 38 0.26
AC073556_32(AC073556|pid:none) Oryza sativa chromosome 3 BAC OSJ... 38 0.26
AY965324_1(AY965324|pid:none) Synthetic construct clone VACV-WR_... 38 0.34
AM920689_4361(AM920689|pid:none) Xanthomonas campestris pv. camp... 38 0.34
(Q9LYY6) RecName: Full=Putative F-box/kelch-repeat protein At5g0... 38 0.34
(Q8NBE8) RecName: Full=Kelch-like protein 23; &AK090653_1(AK090... 38 0.34
(P17371) RecName: Full=Kelch repeat protein C2; &AY243312_26(AY... 38 0.34
EF085915_1(EF085915|pid:none) Picea sitchensis clone WS02717_C19... 37 0.45
BC073337_1(BC073337|pid:none) Xenopus laevis MGC80749 protein, m... 37 0.45
BC034514_1(BC034514|pid:none) Mus musculus kelch-like 12 (Drosop... 37 0.45
BC023173_1(BC023173|pid:none) Mus musculus kelch domain containi... 37 0.58
AY128526_1(AY128526|pid:none) Stylonychia lemnae macronuclear de... 37 0.58
BC111363_1(BC111363|pid:none) Bos taurus calicin, mRNA (cDNA clo... 37 0.58
(Q6RZS3) RecName: Full=Kelch repeat protein C2; &AY484669_18(AY... 37 0.58
AF170726_144(AF170726|pid:none) Myxoma virus strain Lausanne, co... 37 0.58
(Q25386) RecName: Full=Beta-scruin; &Z47541_1(Z47541|pid:none) 37 0.58
U46577_4(U46577|pid:none) Myxoma virus MA51 (MA51) gene, partial... 37 0.58
AB168321_1(AB168321|pid:none) Macaca fascicularis testis cDNA cl... 37 0.76
T20166(T20166) hypothetical protein C53A5.6 - Caenorhabditis ele... 37 0.76
BC126494_1(BC126494|pid:none) Bos taurus ectodermal-neural corte... 37 0.76
AF482758_35(AF482758|pid:none) Cowpox virus strain Brighton Red,... 37 0.76
CP000113_7049(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 37 0.76
AE008922_4056(AE008922|pid:none) Xanthomonas campestris pv. camp... 37 0.76
(Q93XW5) RecName: Full=Nitrile-specifier protein 5; Sho... 37 0.76
FN357334_10(FN357334|pid:none) Schistosoma mansoni genome sequen... 37 0.76
BT061822_1(BT061822|pid:none) Zea mays full-length cDNA clone ZM... 37 0.76
DQ121394_27(DQ121394|pid:none) Vaccinia virus strain Lister clon... 36 1.00
AK044906_1(AK044906|pid:none) Mus musculus 9.5 days embryo parth... 36 1.00
(P87617) RecName: Full=Kelch repeat protein C2; &X94355_32(X943... 36 1.00
AY669396_1(AY669396|pid:none) Rattus norvegicus nuclear restrict... 36 1.00
EU643473_5(EU643473|pid:none) Adineta vaga clone Av240_A TPR rep... 36 1.00
DQ437593_33(DQ437593|pid:none) Cowpox virus strain Germany 91-3,... 36 1.00
AF005381_1(AF005381|pid:none) Homo sapiens ectoderm-neural corte... 36 1.00
(O35709) RecName: Full=Ectoderm-neural cortex protein 1; ... 36 1.00
CR940353_309(CR940353|pid:none) Theileria annulata strain Ankara... 36 1.00
BX571730_1(BX571730|pid:none) Zebrafish DNA sequence from clone ... 36 1.00
AK049187_1(AK049187|pid:none) Mus musculus ES cells cDNA, RIKEN ... 36 1.00
AY049781_1(AY049781|pid:none) Homo sapiens ectodermal-neural cor... 36 1.00
AX119015_1(AX119015|pid:none) Sequence 179 from Patent WO0129221. 36 1.3
AK000066_1(AK000066|pid:none) Homo sapiens cDNA FLJ20059 fis, cl... 36 1.3
(Q776A6) RecName: Full=Kelch repeat protein C2; &(Q8V2Z3) RecNa... 36 1.3
AF409137_19(AF409137|pid:none) Lumpy skin disease virus NW-LW is... 36 1.3
AF325528_19(AF325528|pid:none) Lumpy skin disease virus NI-2490 ... 36 1.3
(Q9LYY3) RecName: Full=F-box/kelch-repeat protein At5g03020; &A... 36 1.3
AK012326_1(AK012326|pid:none) Mus musculus 11 days embryo whole ... 36 1.3
AK044892_1(AK044892|pid:none) Mus musculus 9.5 days embryo parth... 35 1.7
(Q56A24) RecName: Full=Kelch-like protein 24; AltName: Full=Kain... 35 1.7
(Q8JLI4) RecName: Full=Kelch repeat protein C2; &AF012825_18(AF... 35 1.7
DQ439815_35(DQ439815|pid:none) Vaccinia virus strain DUKE, compl... 35 1.7
(Q5RCQ9) RecName: Full=Kelch-like protein 23; &CR858210_1(CR858... 35 1.7
AK163616_1(AK163616|pid:none) Mus musculus 4 days neonate male a... 35 1.7
AK299227_1(AK299227|pid:none) Homo sapiens cDNA FLJ50178 complet... 35 1.7
AK014532_1(AK014532|pid:none) Mus musculus 0 day neonate skin cD... 35 2.2
BC064867_1(BC064867|pid:none) Xenopus tropicalis kelch repeat an... 35 2.2
(Q8C3F7) RecName: Full=Kelch-like protein 30; &AK086025_1(AK086... 35 2.2
(Q09563) RecName: Full=Kelch repeat and BTB domain-containing pr... 35 2.2
AK024412_1(AK024412|pid:none) Homo sapiens cDNA FLJ14350 fis, cl... 35 2.2
BC121419_1(BC121419|pid:none) Xenopus tropicalis DRE1 protein, m... 35 2.2
(Q5ZJU2) RecName: Full=Kelch-like protein 15; &AJ720342_1(AJ720... 35 2.2
BC133175_1(BC133175|pid:none) Danio rerio cDNA clone MGC:158866 ... 35 2.2
AM746676_6386(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 35 2.2
AL049500_18(AL049500|pid:none) Arabidopsis thaliana DNA chromoso... 35 2.9
(Q9T0E2) RecName: Full=Putative F-box/kelch-repeat protein At4g1... 35 2.9
CP000909_1874(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 35 2.9
AC079678_5(AC079678|pid:none) Arabidopsis thaliana chromosome 1 ... 35 2.9
DQ011155_21(DQ011155|pid:none) Monkeypox virus strain Zaire_1979... 35 2.9
AC005496_6(AC005496|pid:none) Arabidopsis thaliana chromosome 2 ... 34 3.8
(Q9CAG8) RecName: Full=F-box/kelch-repeat protein At1g67480; &A... 34 3.8
AK046446_1(AK046446|pid:none) Mus musculus adult male corpora qu... 34 3.8
BC070768_1(BC070768|pid:none) Xenopus laevis hypothetical protei... 34 3.8
AM920431_496(AM920431|pid:none) Penicillium chrysogenum Wisconsi... 34 3.8
BT070700_1(BT070700|pid:none) Picea sitchensis clone WS02745_C17... 34 4.9
AK297240_1(AK297240|pid:none) Homo sapiens cDNA FLJ52328 complet... 34 4.9
AB023039_6(AB023039|pid:none) Arabidopsis thaliana genomic DNA, ... 34 4.9
(Q6NPN5) RecName: Full=F-box/kelch-repeat protein At5g26960; &B... 34 4.9
AY216793_1(AY216793|pid:none) Xenopus laevis ectoderm neural cor... 34 4.9
AK175995_1(AK175995|pid:none) Arabidopsis thaliana mRNA for puta... 34 4.9
AB101615_1(AB101615|pid:none) Rattus norvegicus mRNA for DRE1, c... 34 4.9
BT064707_1(BT064707|pid:none) Zea mays full-length cDNA clone ZM... 34 4.9
AL078620_20(AL078620|pid:none) Arabidopsis thaliana DNA chromoso... 34 4.9
AF170722_141(AF170722|pid:none) Rabbit fibroma virus, complete g... 34 4.9
AK055292_1(AK055292|pid:none) Homo sapiens cDNA FLJ30730 fis, cl... 34 4.9
AL732396_2(AL732396|pid:none) Mouse DNA sequence from clone RP23... 34 4.9
(Q6DEL7) RecName: Full=Kelch-like protein 15; &BC077093_1(BC077... 34 4.9
AK295479_1(AK295479|pid:none) Homo sapiens cDNA FLJ50156 complet... 34 4.9
DQ174778_1(DQ174778|pid:none) Toxoplasma gondii leucine zipper-l... 33 6.5
AM270162_5(AM270162|pid:none) Aspergillus niger contig An08c0070... 33 6.5
EU643474_13(EU643474|pid:none) Adineta vaga clone Av240_B G-prot... 33 6.5
FN357375_18(FN357375|pid:none) Schistosoma mansoni genome sequen... 33 6.5
(Q9FI70) RecName: Full=F-box/kelch-repeat protein At5g49000; &A... 33 6.5
AP009178_1794(AP009178|pid:none) Nitratiruptor sp. SB155-2 genom... 33 6.5
T24063(T24063) hypothetical protein R09A8.3 - Caenorhabditis ele... 33 6.5
BC135056_1(BC135056|pid:none) Danio rerio si:ch211-234f20.7, mRN... 33 6.5
AM439603_2(AM439603|pid:none) Vitis vinifera contig VV78X253760.... 33 6.5
BT063820_1(BT063820|pid:none) Zea mays full-length cDNA clone ZM... 33 6.5
AJ419601_6(AJ419601|pid:none) Mycoplasma mycoides subsp. mycoide... 33 8.4
(Q9FIH1) RecName: Full=F-box protein At5g42460; &AB016888_16(AB... 33 8.4
EF678284_1(EF678284|pid:none) Picea sitchensis clone WS02912_J21... 33 8.4
BC151340_1(BC151340|pid:none) Bos taurus kelch repeat and BTB (P... 33 8.4
AK122569_1(AK122569|pid:none) Mus musculus premature mRNA for mK... 33 8.4
(Q0D2K2) RecName: Full=Kelch-like protein 30; 33 8.4
CR926050_1(CR926050|pid:none) Pongo abelii mRNA; cDNA DKFZp459H1... 33 8.4
AF012825_27(AF012825|pid:none) Ectromelia virus strain Moscow, c... 33 8.4
BC141239_1(BC141239|pid:none) Mus musculus kelch-like 32 (Drosop... 33 8.4
BX890572_9(BX890572|pid:none) Zebrafish DNA sequence from clone ... 33 8.4
BC037887_1(BC037887|pid:none) Homo sapiens kelch repeat and BTB ... 33 8.4

>BC071523_1(BC071523|pid:none) Danio rerio kelch-like 18
(Drosophila), mRNA (cDNA clone MGC:86901 IMAGE:6905132),
complete cds.
Length = 574

Score = 60.1 bits (144), Expect = 6e-08
Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Frame = +2

Query: 44 SVFDGLRYIYLIGGADRDSS-KLLERFDIETQQWTKLASMKFGRSYFNAFYHPTKRCIYV 220
+V +GL +Y IGG D S + +E ++ +T WTK+ASM RS IYV
Sbjct: 332 AVVNGL--LYAIGGYDGQSRLRTVEVYNPDTDTWTKVASMNTQRSAMGTVV--VDGHIYV 387

Query: 221 LDGYVNKDKKSSVEMYSLEKNQWSVICEINQPRYLSGVS-FDGSKYINIIGGVD 379
GY K +SVE Y+ E ++W+++ E++ R +GV+ F+G Y++ GG D
Sbjct: 388 CGGYDGKSSLNSVECYAPETDRWTIVTEMSASRSAAGVTVFEGRIYVS--GGHD 439

Score = 37.4 bits (85), Expect = 0.45
Identities = 46/158 (29%), Positives = 62/158 (39%), Gaps = 47/158 (29%)
Frame = +2

Query: 47 VFDGLRYIYLIGGADRDSS-KLLERFDIETQQWTKLASMKFGRS---------------- 175
V DG +IY+ GG D SS +E + ET +WT + M RS
Sbjct: 380 VVDG--HIYVCGGYDGKSSLNSVECYAPETDRWTIVTEMSASRSAAGVTVFEGRIYVSGG 437

Query: 176 -----------YFN---AFYHPT-----KRC----------IYVLDGYVNKDKKSSVEMY 268
Y+N A +HP KRC +YV GY S E+Y
Sbjct: 438 HDGLQIFNTMEYYNQHTASWHPVAPMINKRCRHGAAALGSNLYVAGGYDGSAFLSGAEVY 497

Query: 269 SLEKNQWSVICEINQPR-YLSGVSFDGSKYINIIGGVD 379
S +QWS + +N R +S V+ G Y +GG D
Sbjct: 498 SSVADQWSHLVAMNTRRSRISLVANCGRLY--AVGGYD 533

Score = 36.2 bits (82), Expect = 1.00
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2

Query: 68 IYLIGGADRDSSKL-LERFDIETQQWTKLASMKFGRSYFNAFYHPTKRCIYVLDGYVNKD 244
+Y+ GG D + E + QW+ L +M RS + + + +Y + GY +
Sbjct: 479 LYVAGGYDGSAFLSGAEVYSSVADQWSHLVAMNTRRSRISLVANCGR--LYAVGGYDGQS 536

Query: 245 KKSSVEMYSLEKNQWS 292
SS+EMY E N+W+
Sbjct: 537 NLSSLEMYDQETNRWT 552

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 882,377,833
Number of extensions: 14137742
Number of successful extensions: 27072
Number of sequences better than 10.0: 389
Number of HSP's gapped: 26675
Number of HSP's successfully gapped: 703
Length of query: 235
Length of database: 1,051,180,864
Length adjustment: 125
Effective length of query: 110
Effective length of database: 646,610,989
Effective search space: 71127208790
Effective search space used: 71127208790
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)

PSORT

psg: 0.69 gvh: 0.37 alm: 0.49 top: 0.53 tms: 0.00 mit: 0.28 mip: 0.03
nuc: 0.06 erl: 0.00 erm: 0.20 pox: 0.30 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

40.0 %: cytoplasmic
36.0 %: nuclear
16.0 %: mitochondrial
8.0 %: cytoskeletal

>> prediction for Contig-U12990-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0