Contig-U12922-1
Contig ID Contig-U12922-1
Contig update 2002.12.18
Contig sequence
>Contig-U12922-1 (Contig-U12922-1Q) /CSM_Contig/Contig-U12922-1Q.Seq.d
ACTGTTGGCCTACTGGNATTATTATTATTATTCAAAATATATATTTGTAT
ACACATAAAATATATATAAATAATTTTTATTAGTGGTAAATTTTGTTTAA
TTAATTTCAATAGTTTCAAATTTTTAAAATAATAAAGAAAAAAAAAATGG
CANGAAAGAAATTAAGAGAATATTCAACAAAATATATTATTAAAAATAAT
TTTGCATTATCATGCAATGGATCTAAATTAAATTTAAAGATGATTCAAGT
TTCACCAACAACACCAACTCTTATTGAATTATCGAAATCAATTGATAATA
TATGGGTCAACAATTCCAAACTCGTAGTTAAACCAGATATGTTATTTGGA
AAAAGAGGTAAAAATGGTTTAGTTTTATTAAATGCAACTTTGGAAGAAGC
CGATAAATTCATTAAAGAGAAAATAAATAAACCAGTTGAAATTGGAGGTA
AATCAGGATTGGTTACTCATTTCATTGTTGAGCCATTTTTACCACATACC
GAAGAATACTACCTTTCAATCACTGCAGAAAGAGAATCAAATAGAATTTC
ATTTTCAAATTGTGGTGGTATGGAAATCGAAGAAAATTGGGATAAAGTCT
CCTCAATTGAAATTCCATATGGTGAATCAATTGATTAATTTGATTTACAT
ACAATAATTGATTCTTCTGTACAAAATAGAGAATATGTTATTGATTTTAT
TAGAAATGTTTATAAATTATTTAATGATTTATCATTCCATTTTATTGAAA
TGAATCCATTTACATTAGATGCAGAAGGTAAACCTTATCCATTAGATGCA
AGAGGTGAAGTTGATGAATGTGCATCATTTAAATGTGGTGGTCGTTGGTT
AGTTGATGGCGAACCAGTTCAATTTCCACAACCATTTGGTAGAAGTTTAT
ATCCAGAGGAAACCTATGTAAATGAAATTGATGAAAAAACAGGTGCATCC
TTGAAATTAACTTTATTAAATCCAAAAGGAAGAATATGGGCAATGGTTGC
CGGAGGTGGTGCCTCTGTTATCTATGCTGACACTGTTGCTGATTTAGGTT
TTGGTAATGAGCTTGGAAATTATGGTGAATATTCCGGTGATCCAAATGAA
GAGGATACTCATAAATATGCATGCACTTTAATTTCATTGGCAACCAGAAA
TCCTGATTCTAGACCAAGAGCATTATTAATTGGTGGTGGTATTGCTAATT
TTACTGATGTGGCTGCCACTTTCAAAGGTATCATTAGAGCAATTAAAGAG
TATCATGATGATATCATTAAATCAAATCTTTCCATTTTCGTTAGAAGAGG
TGGTCCAAATTATCAATCGGGTTTACAACATATGAGAGAAATTGGTCATA
AATTACATATCCCAATCAAAGTTTTCGGTCCTGAAGTTAATATGACAAGT
ATTGTTGCAATGGCAATCCAACATATTAATGTACCTATTGTTAATCCTTT
AAAACCACAAACAAATAATTTTTCACCAACTTTAAATGGTGTTCATTAAA
AATTTTAAAAAAAAAAAAAAAAAAAAAAAA

Gap no gap
Contig length 1530
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 715228
End point 713718
Strand (PLUS/MINUS) MINUS
Number of clones 29
Number of EST 35
Link to clone list U12922
List of clone(s)

est1=AFA176F,1,143
est2=CFD793F,15,143
est3=CFB553F,21,143
est4=CFI528F,21,143
est5=CFD477F,27,143
est6=SFI350F,37,143
est7=SFD703F,68,583
est8=VFF576F,206,776
est9=VFL785F,221,417
est10=AFA176Z,704,1468
est11=VFF648Z,716,1502
est12=SFF560Z,784,1450
est13=VFE113Z,787,1342
est14=CFF880Z,793,1504
est15=VFF576Z,793,1502
est16=VFF631Z,814,1502
est17=CFI528Z,815,1521
est18=CHA469Z,863,1323
est19=VSB813Z,888,1527
est20=CFB553Z,910,1486
est21=VFM554Z,917,1380
est22=SFI350Z,928,1514
est23=SSC786E,939,1528
est24=VSB133Z,945,1528
est25=VFG575Z,965,1472
est26=SLC828E,973,1507
est27=VSF546Z,973,1478
est28=VFC615Z,1026,1476
est29=VFF273Z,1026,1476
est30=VFK767Z,1026,1390
est31=VFO493Z,1026,1324
est32=SFH439Z,1031,1249
est33=VFM543Z,1088,1357
est34=AFD191Z,1090,1477
est35=CFD793Z,1111,1460
Translated Amino Acid sequence
cwptgiiiiiqniylythkiyinnfy*w*ilfn*fq*fqifkiikkkkmaxkklreystk
yiiknnfalscngsklnlkmiqvspttptlielsksidniwvnnsklvvkpdmlfgkrgk
nglvllnatleeadkfikekinkpveiggksglvthfivepflphteeyylsitaeresn
risfsncggmeieenwdkvssieipygesid*FDLHTIIDSSVQNREYVIDFIRNVYKLF
NDLSFHFIEMNPFTLDAEGKPYPLDARGEVDECASFKCGGRWLVDGEPVQFPQPFGRSLY
PEETYVNEIDEKTGASLKLTLLNPKGRIWAMVAGGGASVIYADTVADLGFGNELGNYGEY
SGDPNEEDTHKYACTLISLATRNPDSRPRALLIGGGIANFTDVAATFKGIIRAIKEYHDD
IIKSNLSIFVRRGGPNYQSGLQHMREIGHKLHIPIKVFGPEVNMTSIVAMAIQHINVPIV
NPLKPQTNNFSPTLNGVH*kf*kkkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
tvgllxllllfkiyicihikyi*iifisgkfclinfnsfkflk**rkkkwxern*eniqq
nillkiilhyhamdln*i*r*fkfhqqhqlllnyrnqliiygstipns*lnqicylekev
kmv*fy*mqlwkkpinslkrk*inqlklevnqdwllisllshfyhipknttfqslqkenq
iefhfqivvvwkskkigikspqlkfhmvnqlinliyiq*lillykienmllillemfiny
lmiyhsillk*ihlh*mqkvnlih*mqevklmnvhhlnvvvvg*lmanqfnfhnhlvevy
iqrkpm*mklmkkqvhp*n*ly*iqkeeygqwlpevvpllsmltllli*vlvmsleimvn
ipviqmkrilinmhal*fhwqpeilildqehy*lvvvllillmwlplskvsleqlksimm
islnqifpfsleevvqiinrvyni*eklvinyisqskfsvlkli*qvllqwqsnilmyll
lil*nhkqiifhql*mvfiknfkkkkkkkk


Frame B:
llaywxyyyyskyifvyt*niyk*fllvvnfv*lisivsnf*nnkekkngxkeikrifnk
iyy*k*fciimqwi*ikfkddssftnntnsy*iiein**ymgqqfqtrs*tryviwkkr*
kwfsfikcnfgrsr*ih*renk*ts*nwr*irigysfhc*aifttyrrilpfnhcrkrik
*nfifklwwygnrrklg*slln*nsiw*in*li*ftynn*ffctk*ricy*fy*kcl*ii
**fiipfy*nesiyircrr*tlsirckr*s**mcii*mwwslvs*wrtssisttiw*kfi
srgnlck*n**knrcileinfikskrknmgngcrrwclcylc*hcc*frfw**awklw*i
fr*sk*rgys*icmhfnfignqks*f*tksiinwwwyc*fy*cgchfqryh*sn*rvs**
yh*iksfhfr*krwsklsigfttyernws*itypnqsfrs*s*ydkyccngnpty*ctyc
*sfkttnk*fftnfkwcslkilkkkkkkk


Frame C:
cwptgiiiiiqniylythkiyinnfy*w*ilfn*fq*fqifkiikkkkmaxkklreystk
yiiknnfalscngsklnlkmiqvspttptlielsksidniwvnnsklvvkpdmlfgkrgk
nglvllnatleeadkfikekinkpveiggksglvthfivepflphteeyylsitaeresn
risfsncggmeieenwdkvssieipygesid*FDLHTIIDSSVQNREYVIDFIRNVYKLF
NDLSFHFIEMNPFTLDAEGKPYPLDARGEVDECASFKCGGRWLVDGEPVQFPQPFGRSLY
PEETYVNEIDEKTGASLKLTLLNPKGRIWAMVAGGGASVIYADTVADLGFGNELGNYGEY
SGDPNEEDTHKYACTLISLATRNPDSRPRALLIGGGIANFTDVAATFKGIIRAIKEYHDD
IIKSNLSIFVRRGGPNYQSGLQHMREIGHKLHIPIKVFGPEVNMTSIVAMAIQHINVPIV
NPLKPQTNNFSPTLNGVH*kf*kkkkkkk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U12922-1 (Contig-U12922-1Q)
/CSM_Contig/Contig-U12922-1Q.Seq.d
(1530 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U12922-1 (Contig-U12922-1Q) /CSM_Contig/Conti... 2688 0.0
Contig-U04651-1 (Contig-U04651-1Q) /CSM_Contig/Conti... 46 1e-04
Contig-U14143-1 (Contig-U14143-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U11082-1 (Contig-U11082-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U14644-1 (Contig-U14644-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U13115-1 (Contig-U13115-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U13114-1 (Contig-U13114-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U11902-1 (Contig-U11902-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U11299-1 (Contig-U11299-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U06640-1 (Contig-U06640-1Q) /CSM_Contig/Conti... 40 0.007

>Contig-U12922-1 (Contig-U12922-1Q) /CSM_Contig/Contig-U12922-1Q.Seq.d
Length = 1530

Score = 2688 bits (1356), Expect = 0.0
Identities = 1359/1359 (100%)
Strand = Plus / Plus


Query: 148 tggcangaaagaaattaagagaatattcaacaaaatatattattaaaaataattttgcat 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 tggcangaaagaaattaagagaatattcaacaaaatatattattaaaaataattttgcat 207


Query: 208 tatcatgcaatggatctaaattaaatttaaagatgattcaagtttcaccaacaacaccaa 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tatcatgcaatggatctaaattaaatttaaagatgattcaagtttcaccaacaacaccaa 267


Query: 268 ctcttattgaattatcgaaatcaattgataatatatgggtcaacaattccaaactcgtag 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ctcttattgaattatcgaaatcaattgataatatatgggtcaacaattccaaactcgtag 327


Query: 328 ttaaaccagatatgttatttggaaaaagaggtaaaaatggtttagttttattaaatgcaa 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttaaaccagatatgttatttggaaaaagaggtaaaaatggtttagttttattaaatgcaa 387


Query: 388 ctttggaagaagccgataaattcattaaagagaaaataaataaaccagttgaaattggag 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ctttggaagaagccgataaattcattaaagagaaaataaataaaccagttgaaattggag 447


Query: 448 gtaaatcaggattggttactcatttcattgttgagccatttttaccacataccgaagaat 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gtaaatcaggattggttactcatttcattgttgagccatttttaccacataccgaagaat 507


Query: 508 actacctttcaatcactgcagaaagagaatcaaatagaatttcattttcaaattgtggtg 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 actacctttcaatcactgcagaaagagaatcaaatagaatttcattttcaaattgtggtg 567


Query: 568 gtatggaaatcgaagaaaattgggataaagtctcctcaattgaaattccatatggtgaat 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gtatggaaatcgaagaaaattgggataaagtctcctcaattgaaattccatatggtgaat 627


Query: 628 caattgattaatttgatttacatacaataattgattcttctgtacaaaatagagaatatg 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 caattgattaatttgatttacatacaataattgattcttctgtacaaaatagagaatatg 687


Query: 688 ttattgattttattagaaatgtttataaattatttaatgatttatcattccattttattg 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 ttattgattttattagaaatgtttataaattatttaatgatttatcattccattttattg 747


Query: 748 aaatgaatccatttacattagatgcagaaggtaaaccttatccattagatgcaagaggtg 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 aaatgaatccatttacattagatgcagaaggtaaaccttatccattagatgcaagaggtg 807


Query: 808 aagttgatgaatgtgcatcatttaaatgtggtggtcgttggttagttgatggcgaaccag 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 aagttgatgaatgtgcatcatttaaatgtggtggtcgttggttagttgatggcgaaccag 867


Query: 868 ttcaatttccacaaccatttggtagaagtttatatccagaggaaacctatgtaaatgaaa 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 ttcaatttccacaaccatttggtagaagtttatatccagaggaaacctatgtaaatgaaa 927


Query: 928 ttgatgaaaaaacaggtgcatccttgaaattaactttattaaatccaaaaggaagaatat 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 ttgatgaaaaaacaggtgcatccttgaaattaactttattaaatccaaaaggaagaatat 987


Query: 988 gggcaatggttgccggaggtggtgcctctgttatctatgctgacactgttgctgatttag 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 gggcaatggttgccggaggtggtgcctctgttatctatgctgacactgttgctgatttag 1047


Query: 1048 gttttggtaatgagcttggaaattatggtgaatattccggtgatccaaatgaagaggata 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 gttttggtaatgagcttggaaattatggtgaatattccggtgatccaaatgaagaggata 1107


Query: 1108 ctcataaatatgcatgcactttaatttcattggcaaccagaaatcctgattctagaccaa 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1108 ctcataaatatgcatgcactttaatttcattggcaaccagaaatcctgattctagaccaa 1167


Query: 1168 gagcattattaattggtggtggtattgctaattttactgatgtggctgccactttcaaag 1227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1168 gagcattattaattggtggtggtattgctaattttactgatgtggctgccactttcaaag 1227


Query: 1228 gtatcattagagcaattaaagagtatcatgatgatatcattaaatcaaatctttccattt 1287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1228 gtatcattagagcaattaaagagtatcatgatgatatcattaaatcaaatctttccattt 1287


Query: 1288 tcgttagaagaggtggtccaaattatcaatcgggtttacaacatatgagagaaattggtc 1347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1288 tcgttagaagaggtggtccaaattatcaatcgggtttacaacatatgagagaaattggtc 1347


Query: 1348 ataaattacatatcccaatcaaagttttcggtcctgaagttaatatgacaagtattgttg 1407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1348 ataaattacatatcccaatcaaagttttcggtcctgaagttaatatgacaagtattgttg 1407


Query: 1408 caatggcaatccaacatattaatgtacctattgttaatcctttaaaaccacaaacaaata 1467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1408 caatggcaatccaacatattaatgtacctattgttaatcctttaaaaccacaaacaaata 1467


Query: 1468 atttttcaccaactttaaatggtgttcattaaaaatttt 1506
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1468 atttttcaccaactttaaatggtgttcattaaaaatttt 1506


Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/32 (100%)
Strand = Plus / Plus


Query: 1 actgttggcctactggnattattattattatt 32
||||||||||||||||||||||||||||||||
Sbjct: 1 actgttggcctactggnattattattattatt 32


>Contig-U04651-1 (Contig-U04651-1Q) /CSM_Contig/Contig-U04651-1Q.Seq.d
Length = 509

Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 1451 aaaaccacaaacaaataattttt 1473
|||||||||||||||||||||||
Sbjct: 55 aaaaccacaaacaaataattttt 77


>Contig-U14143-1 (Contig-U14143-1Q) /CSM_Contig/Contig-U14143-1Q.Seq.d
Length = 130

Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/33 (93%), Gaps = 1/33 (3%)
Strand = Plus / Plus


Query: 1 actgttggcctactggnatta-ttattattatt 32
|||||||||||||||| |||| |||||||||||
Sbjct: 2 actgttggcctactggtattatttattattatt 34


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 45,696
Number of Sequences: 6905
Number of extensions: 45696
Number of successful extensions: 12794
Number of sequences better than 10.0: 1981
length of query: 1530
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1514
effective length of database: 5,564,391
effective search space: 8424487974
effective search space used: 8424487974
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.12. 4
Homology vs DNA
Query= Contig-U12922-1 (Contig-U12922-1Q) /CSM_Contig/Contig-U12922-1Q.Seq.d
(1530 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ428571) Dictyostelium discoideum cDNA clone:ddv12o12, 3' ... 1560 0.0 1
(BJ343049) Dictyostelium discoideum cDNA clone:dda1g19, 3' e... 1471 0.0 2
(BJ428677) Dictyostelium discoideum cDNA clone:ddv12g19, 3' ... 1402 0.0 1
(BJ372519) Dictyostelium discoideum cDNA clone:ddc12p20, 3' ... 1402 0.0 1
(BJ428557) Dictyostelium discoideum cDNA clone:ddv12m08, 3' ... 1344 0.0 1
(BJ398473) Dictyostelium discoideum cDNA clone:dds12g15, 3' ... 1267 0.0 1
(BJ375333) Dictyostelium discoideum cDNA clone:ddc18g07, 3' ... 1225 0.0 1
(BJ346882) Dictyostelium discoideum cDNA clone:dda25l12, 3' ... 1199 0.0 3
(AU262263) Dictyostelium discoideum vegetative cDNA clone:VS... 1181 0.0 2
(C84106) Dictyostelium discoideum slug cDNA, clone SSC786. 1126 0.0 1
(BJ410512) Dictyostelium discoideum cDNA clone:ddv12g19, 5' ... 1124 0.0 1
(AU261837) Dictyostelium discoideum vegetative cDNA clone:VS... 1106 0.0 1
(BJ430872) Dictyostelium discoideum cDNA clone:ddv9i03, 3' e... 1090 0.0 1
(AU034404) Dictyostelium discoideum slug cDNA, clone SLC828. 1059 0.0 1
(BJ373701) Dictyostelium discoideum cDNA clone:ddc4i13, 3' e... 1059 0.0 3
(BJ402622) Dictyostelium discoideum cDNA clone:dds17d13, 3' ... 1039 0.0 1
(BJ431604) Dictyostelium discoideum cDNA clone:ddv14e19, 3' ... 890 0.0 2
(BJ377108) Dictyostelium discoideum cDNA clone:ddc22j18, 3' ... 848 0.0 2
(AU265399) Dictyostelium discoideum vegetative cDNA clone:VS... 729 0.0 2
(BJ388126) Dictyostelium discoideum cDNA clone:dds8f01, 5' e... 841 0.0 1
(BJ435277) Dictyostelium discoideum cDNA clone:ddv26k13, 3' ... 827 0.0 1
(BJ428381) Dictyostelium discoideum cDNA clone:ddv11a20, 3' ... 688 0.0 1
(BJ430125) Dictyostelium discoideum cDNA clone:ddv6m04, 3' e... 680 0.0 1
(BJ374564) Dictyostelium discoideum cDNA clone:ddc8j23, 3' e... 656 0.0 1
(BJ433662) Dictyostelium discoideum cDNA clone:ddv22f17, 3' ... 581 e-161 1
(BJ341703) Dictyostelium discoideum cDNA clone:dda7e23, 3' e... 549 e-151 1
(BJ436085) Dictyostelium discoideum cDNA clone:ddv29j24, 3' ... 440 e-119 1
(BJ435167) Dictyostelium discoideum cDNA clone:ddv26e11, 3' ... 353 1e-92 1
(BJ416078) Dictyostelium discoideum cDNA clone:ddv24j21, 5' ... 353 1e-92 1
(BJ400927) Dictyostelium discoideum cDNA clone:dds15n10, 3' ... 264 9e-66 1
(EF085037) Picea sitchensis clone WS0283_M06 unknown mRNA. 56 2e-16 4
(EF085911) Picea sitchensis clone WS0277_N08 unknown mRNA. 56 2e-16 4
(CO166531) FLD1_62_E08.g1_A029 Root flooded Pinus taeda cDNA... 64 6e-15 3
(EX262983) 1443487_5_E13_059 PY06 Carica papaya cDNA, mRNA s... 62 1e-14 3
(CA932300) MTU5CS.P11.B11 Aspen stem cDNA Library Populus tr... 60 1e-13 4
(BM108865) EST556401 potato roots Solanum tuberosum cDNA clo... 52 4e-12 4
(DN910724) Cuc6_1_B02 Cucumber fruit development cDNA librar... 54 5e-12 3
(BQ512190) EST619605 Generation of a set of potato cDNA clon... 52 5e-12 4
(ES815529) UFL_285_21 Cotton fiber 0-10 day post anthesis Go... 66 6e-12 3
(AP007889) Lotus japonicus genomic DNA, chromosome 1, clone:... 60 6e-12 9
(ES801576) UFL_610_23 Cotton fiber 0-10 day post anthesis Go... 66 9e-12 3
(DR095621) STRR1_22_A10.g1_A033 Stem Response Resistant Pinu... 64 1e-11 2
(DN978650) SV5_53B04_SV5_53_030 SV5 Solanum chacoense cDNA, ... 52 1e-11 4
(DR054914) RTCA1_20_H10.b1_A029 Roots minus calcium Pinus ta... 64 1e-11 2
(DR387496) RTHG1_22_E03.b1_A029 Roots plus added mercury Pin... 64 1e-11 2
(DR058287) RTNIT1_10_H09.g1_A029 Roots minus nitrogen Pinus ... 64 1e-11 2
(DR102844) STRR1_84_A08.g1_A033 Stem Response Resistant Pinu... 64 1e-11 2
(DR119036) RTMG1_20_F02.g1_A029 Roots minus magnesium Pinus ... 64 1e-11 2
(DR013268) HEAT1_18_F08.b1_A029 Root at 37 C for 24 hr Pinus... 64 1e-11 2
(CX650381) COLD1_45_G01.b1_A029 Root cold Pinus taeda cDNA c... 64 1e-11 2
(CO166463) FLD1_62_E08.b1_A029 Root flooded Pinus taeda cDNA... 64 1e-11 2
(CO364564) RTK1_16_A11.g1_A029 Roots minus potassium Pinus t... 64 1e-11 2
(DR020024) STRS1_34_D04.b1_A034 Shoot tip pitch canker susce... 64 1e-11 2
(CO163523) FLD1_42_E01.b1_A029 Root flooded Pinus taeda cDNA... 64 1e-11 2
(CO365124) RTK1_23_F11.g1_A029 Roots minus potassium Pinus t... 64 1e-11 2
(CO166981) FLD1_65_H08.g1_A029 Root flooded Pinus taeda cDNA... 64 1e-11 2
(DR163891) RTFE1_45_C07.g1_A029 Roots minus iron Pinus taeda... 64 1e-11 2
(DR092751) STRR1_3_E10.g1_A033 Stem Response Resistant Pinus... 64 1e-11 2
(DR092698) STRR1_3_E10.b1_A033 Stem Response Resistant Pinus... 64 2e-11 2
(EA053492) Sequence 221 from patent US 7157621. 62 2e-11 4
(DY329960) OB_MEa0004O04.r OB_MEa Ocimum basilicum cDNA clon... 66 5e-11 4
(AM287747) Prunus persica EST, clone Skin20C02. 50 5e-11 3
(DR167640) RTPHOS1_20_C10.b1_A029 Roots minus phosphorous Pi... 62 5e-11 2
(DR386549) RTHG1_16_A03.b1_A029 Roots plus added mercury Pin... 46 7e-11 3
(EH725401) CNMM11830.b1_L06.ab1 CNM(LMS) spotted knapweed Ce... 46 1e-10 4
(EL351920) CCEL8545.b1_B01.ab1 CCE(LMS) endive Cichorium end... 60 2e-10 3
(ES662595) WS03917.C21_O17 SS-B-24 Picea sitchensis cDNA clo... 56 4e-10 3
(BQ512191) EST619606 Generation of a set of potato cDNA clon... 52 6e-10 3
(DR111566) RTS1_18_E11.g1_A029 Roots minus sulfur Pinus taed... 64 6e-10 2
(DR055000) RTCA1_20_H10.g1_A029 Roots minus calcium Pinus ta... 64 6e-10 2
(DR015755) STRS1_5_A05.g1_A034 Shoot tip pitch canker suscep... 64 7e-10 2
(DR096741) STRR1_30_B07.b1_A033 Stem Response Resistant Pinu... 64 8e-10 2
(CO367637) RTK1_35_C08.g1_A029 Roots minus potassium Pinus t... 64 8e-10 2
(CK860327) 31259 In vitro Root Solanum tuberosum cDNA, mRNA ... 52 9e-10 3
(CX699339) 85873.1 Stolon Solanum tuberosum cDNA clone 85873... 52 9e-10 3
(FG190831) AGN_PNL216dr1_d4.trimmed.seq AGN_PNL Nicotiana ta... 44 1e-09 4
(CV434559) 58037.1 Suspension culture Solanum tuberosum cDNA... 52 1e-09 3
(FG199584) AGN_PNL228dr1_e9.trimmed.seq AGN_PNL Nicotiana ta... 44 2e-09 4
(FG150930) AGN_RNC112xj22r1.ab1 AGN_RNC Nicotiana tabacum cD... 44 2e-09 4
(FG175073) AGN_RNC123xd16r1.ab1 AGN_RNC Nicotiana tabacum cD... 44 2e-09 4
(EB451932) KT7C.112P10F.051221T7 KT7 Nicotiana tabacum cDNA ... 44 2e-09 4
(FG149994) AGN_RNC114xo11r1.ab1 AGN_RNC Nicotiana tabacum cD... 44 2e-09 4
(FG161005) AGN_RNC019xh19r1.ab1 AGN_RNC Nicotiana tabacum cD... 44 2e-09 4
(FG170131) AGN_RNC002xi19r1.ab1 AGN_RNC Nicotiana tabacum cD... 44 2e-09 4
(FG152890) AGN_RNC107xn09r1.ab1 AGN_RNC Nicotiana tabacum cD... 44 2e-09 4
(DW004136) KR3B.107N22F.051110T7 KR3B Nicotiana tabacum cDNA... 44 2e-09 4
(FG149834) AGN_RNC115xh06r1.ab1 AGN_RNC Nicotiana tabacum cD... 44 2e-09 4
(AM717637) Cucumis melo subsp. melo EST, clone PS_38-E05-M13R. 46 2e-09 4
(FG158544) AGN_RNC023xa17r1.ab1 AGN_RNC Nicotiana tabacum cD... 44 2e-09 4
(ES877511) WS02934.CR_O16 SS-IB-A-FL-15 Picea sitchensis cDN... 56 3e-09 2
(ES248441) WS0368.C21_N01 SS-B-N-21 Picea sitchensis cDNA cl... 56 3e-09 2
(DR515694) WS02741.CR_E23 SS-IL-A-FL-14 Picea sitchensis cDN... 56 3e-09 2
(ES251498) WS03714.C21.1_M06 SS-B-N-22 Picea sitchensis cDNA... 56 3e-09 2
(ES871197) WS02834.CR_D20 SS-IB-A-FL-13 Picea sitchensis cDN... 56 3e-09 2
(ES876373) WS02931.CR_K03 SS-IB-A-FL-15 Picea sitchensis cDN... 56 3e-09 2
(DR517669) WS02747.CR_B09 SS-IL-A-FL-14 Picea sitchensis cDN... 56 3e-09 2
(ES878704) WS02938.CR_I07 SS-IB-A-FL-15 Picea sitchensis cDN... 56 3e-09 2
(EX439068) GQ04009.B7_J14 GQ040 - Shoot tip - Active growth ... 56 3e-09 2
(ES864197) WS027102.CR_D09 SS-IL-A-FL-14 Picea sitchensis cD... 56 3e-09 2
(DR516837) WS02744.CR_I19 SS-IL-A-FL-14 Picea sitchensis cDN... 56 3e-09 2

>(BJ428571) Dictyostelium discoideum cDNA clone:ddv12o12, 3' end,
single read.
Length = 787

Score = 1560 bits (787), Expect = 0.0
Identities = 787/787 (100%)
Strand = Plus / Minus


Query: 716 attatttaatgatttatcattccattttattgaaatgaatccatttacattagatgcaga 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 attatttaatgatttatcattccattttattgaaatgaatccatttacattagatgcaga 728


Query: 776 aggtaaaccttatccattagatgcaagaggtgaagttgatgaatgtgcatcatttaaatg 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 aggtaaaccttatccattagatgcaagaggtgaagttgatgaatgtgcatcatttaaatg 668


Query: 836 tggtggtcgttggttagttgatggcgaaccagttcaatttccacaaccatttggtagaag 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tggtggtcgttggttagttgatggcgaaccagttcaatttccacaaccatttggtagaag 608


Query: 896 tttatatccagaggaaacctatgtaaatgaaattgatgaaaaaacaggtgcatccttgaa 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 tttatatccagaggaaacctatgtaaatgaaattgatgaaaaaacaggtgcatccttgaa 548


Query: 956 attaactttattaaatccaaaaggaagaatatgggcaatggttgccggaggtggtgcctc 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 attaactttattaaatccaaaaggaagaatatgggcaatggttgccggaggtggtgcctc 488


Query: 1016 tgttatctatgctgacactgttgctgatttaggttttggtaatgagcttggaaattatgg 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tgttatctatgctgacactgttgctgatttaggttttggtaatgagcttggaaattatgg 428


Query: 1076 tgaatattccggtgatccaaatgaagaggatactcataaatatgcatgcactttaatttc 1135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tgaatattccggtgatccaaatgaagaggatactcataaatatgcatgcactttaatttc 368


Query: 1136 attggcaaccagaaatcctgattctagaccaagagcattattaattggtggtggtattgc 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 attggcaaccagaaatcctgattctagaccaagagcattattaattggtggtggtattgc 308


Query: 1196 taattttactgatgtggctgccactttcaaaggtatcattagagcaattaaagagtatca 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 taattttactgatgtggctgccactttcaaaggtatcattagagcaattaaagagtatca 248


Query: 1256 tgatgatatcattaaatcaaatctttccattttcgttagaagaggtggtccaaattatca 1315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tgatgatatcattaaatcaaatctttccattttcgttagaagaggtggtccaaattatca 188


Query: 1316 atcgggtttacaacatatgagagaaattggtcataaattacatatcccaatcaaagtttt 1375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 atcgggtttacaacatatgagagaaattggtcataaattacatatcccaatcaaagtttt 128


Query: 1376 cggtcctgaagttaatatgacaagtattgttgcaatggcaatccaacatattaatgtacc 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 cggtcctgaagttaatatgacaagtattgttgcaatggcaatccaacatattaatgtacc 68


Query: 1436 tattgttaatcctttaaaaccacaaacaaataatttttcaccaactttaaatggtgttca 1495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 tattgttaatcctttaaaaccacaaacaaataatttttcaccaactttaaatggtgttca 8


Query: 1496 ttaaaaa 1502
|||||||
Sbjct: 7 ttaaaaa 1

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,847,883,868
Number of extensions: 121330689
Number of successful extensions: 10311094
Number of sequences better than 10.0: 1188
Length of query: 1530
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1506
Effective length of database: 97,308,875,965
Effective search space: 146547167203290
Effective search space used: 146547167203290
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7. 5
Homology vs Protein
Query= Contig-U12922-1 (Contig-U12922-1Q) /CSM_Contig/Contig-U12922-1Q.Seq.d
(1530 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AJ344108_1(AJ344108|pid:none) Lupinus albus mRNA for ATP citrate... 451 e-125
AC132565_14(AC132565|pid:none) Medicago truncatula clone mth2-4a... 447 e-124
AM468006_2(AM468006|pid:none) Vitis vinifera contig VV78X180138.... 446 e-123
BT070808_1(BT070808|pid:none) Picea sitchensis clone WS02750_O19... 443 e-123
AC002292_32(AC002292|pid:none) Arabidopsis thaliana BAC F8A5, co... 442 e-122
AC009398_11(AC009398|pid:none) Genomic sequence for Arabidopsis ... 441 e-122
AK062236_1(AK062236|pid:none) Oryza sativa Japonica Group cDNA c... 438 e-121
AY087536_1(AY087536|pid:none) Arabidopsis thaliana clone 36439 m... 437 e-121
EU962919_1(EU962919|pid:none) Zea mays clone 246539 ATP-citrate ... 435 e-120
BT041953_1(BT041953|pid:none) Zea mays full-length cDNA clone ZM... 435 e-120
AC003970_9(AC003970|pid:none) Arabidopsis thaliana chromosome I ... 426 e-117
CP001230_1681(CP001230|pid:none) Persephonella marina EX-H1, com... 381 e-104
DQ853422_1(DQ853422|pid:none) Sulfurihydrogenibium subterraneum ... 379 e-103
CP001080_1023(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP... 372 e-101
DQ853418_1(DQ853418|pid:none) Desulfurobacterium crinifex ATP ci... 370 e-101
AB036847_1(AB036847|pid:none) Ciona intestinalis Ci-ACL mRNA for... 369 e-100
(P53396) RecName: Full=ATP-citrate synthase; EC=2.3.3.8... 356 1e-96
(Q32PF2) RecName: Full=ATP-citrate synthase; EC=2.3.3.8... 356 1e-96
AK295675_1(AK295675|pid:none) Homo sapiens cDNA FLJ56442 complet... 355 2e-96
(Q91V92) RecName: Full=ATP-citrate synthase; EC=2.3.3.8... 352 2e-95
AK162364_1(AK162364|pid:none) Mus musculus adult male epididymis... 352 2e-95
BC100618_1(BC100618|pid:none) Rattus norvegicus ATP citrate lyas... 352 2e-95
AJ851548_1(AJ851548|pid:none) Gallus gallus mRNA for hypothetica... 352 2e-95
EU073662_1(EU073662|pid:none) Sus scrofa ATP citrate lyase (ACL)... 350 8e-95
BC084253_1(BC084253|pid:none) Xenopus laevis hypothetical LOC495... 345 2e-93
BC084776_1(BC084776|pid:none) Xenopus laevis hypothetical LOC495... 343 7e-93
DQ853417_1(DQ853417|pid:none) Balnearium lithotrophicum ATP citr... 343 1e-92
BC080908_1(BC080908|pid:none) Xenopus tropicalis acly protein, m... 342 2e-92
AE013599_2272(AE013599|pid:none) Drosophila melanogaster chromos... 339 2e-91
AF132166_1(AF132166|pid:none) Drosophila melanogaster LD21334 fu... 339 2e-91
BC076484_1(BC076484|pid:none) Danio rerio ATP citrate lyase, mRN... 337 7e-91
CP001279_682(CP001279|pid:none) Nautilia profundicola AmH, compl... 337 7e-91
AC146937_2(AC146937|pid:none) Oryza sativa (japonica cultivar-gr... 330 6e-89
AY312991_5(AY312991|pid:none) Alvinella pompejana epibiont 7G3 f... 310 7e-83
AL356173_32(AL356173|pid:none) Neurospora crassa DNA linkage gro... 309 2e-82
CU638743_786(CU638743|pid:none) Podospora anserina genomic DNA c... 308 4e-82
FN357308_19(FN357308|pid:none) Schistosoma mansoni genome sequen... 307 6e-82
CP000153_568(CP000153|pid:none) Sulfurimonas denitrificans DSM 1... 307 8e-82
(P53585) RecName: Full=Probable ATP-citrate synthase; E... 306 2e-81
AY312990_4(AY312990|pid:none) Alvinella pompejana epibiont 6C6 f... 305 3e-81
AJ132431_1(AJ132431|pid:none) Gibberella pulicaris acl1 gene, ex... 300 7e-80
AP007157_186(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 300 7e-80
AM270218_53(AM270218|pid:none) Aspergillus niger contig An11c001... 297 8e-79
EU038296_1(EU038296|pid:none) Toxoplasma gondii strain RH ATP ci... 261 6e-68
AY929800_1(AY929800|pid:none) Thioreductor micantisoli strain BK... 248 4e-64
AY929802_1(AY929802|pid:none) Sulfurovum lithotrophicum strain B... 241 4e-62
AK222079_1(AK222079|pid:none) Arabidopsis thaliana mRNA for hypo... 227 8e-58
L47319_1(L47319|pid:none) Rattus norvegicus ATP-citrate lyase (A... 218 6e-55
AP008217_1510(AP008217|pid:none) Oryza sativa (japonica cultivar... 197 9e-50
CP001097_1191(CP001097|pid:none) Chlorobium limicola DSM 245, co... 176 2e-42
CP000492_1261(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 174 8e-42
CP001100_2530(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 173 1e-41
CP000607_853(CP000607|pid:none) Chlorobium phaeovibrioides DSM 2... 172 2e-41
CP000096_1031(CP000096|pid:none) Pelodictyon luteolum DSM 273, c... 170 1e-40
CP001101_1291(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 166 3e-39
CP001108_1058(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 164 1e-38
AE006470_1079(AE006470|pid:none) Chlorobium tepidum TLS, complet... 164 1e-38
CP001099_987(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, ... 160 9e-38
AB054669_1(AB054669|pid:none) Chlorobium limicola aclB gene for ... 160 1e-37
EU156136_1(EU156136|pid:none) Uncultured Sulfurihydrogenibium sp... 143 1e-32
AY430991_1(AY430991|pid:none) Uncultured prokaryote clone 2E08 A... 142 3e-32
EU156138_1(EU156138|pid:none) Uncultured Sulfurihydrogenibium sp... 142 3e-32
EU156137_1(EU156137|pid:none) Uncultured Sulfurihydrogenibium sp... 140 2e-31
EU156132_1(EU156132|pid:none) Uncultured Sulfurihydrogenibium sp... 139 2e-31
EU156139_1(EU156139|pid:none) Uncultured Sulfurihydrogenibium sp... 139 3e-31
EU156134_1(EU156134|pid:none) Uncultured Sulfurihydrogenibium sp... 139 4e-31
AY308641_1(AY308641|pid:none) Persephonella marina ATP citrate l... 135 4e-30
AY430981_1(AY430981|pid:none) Uncultured prokaryote clone 690-42... 135 5e-30
EF644680_1(EF644680|pid:none) Enrichment culture clone BSEaclB5 ... 134 9e-30
AY430956_1(AY430956|pid:none) Uncultured prokaryote clone 820-C1... 133 2e-29
AY308604_1(AY308604|pid:none) Uncultured episymbiont of Alvinell... 133 2e-29
AY308637_1(AY308637|pid:none) Uncultured episymbiont of Alvinell... 132 3e-29
AY430946_1(AY430946|pid:none) Uncultured prokaryote clone 729-4_... 132 3e-29
AY430951_1(AY430951|pid:none) Uncultured prokaryote clone 827-3 ... 132 3e-29
AY430950_1(AY430950|pid:none) Uncultured prokaryote clone 827-4 ... 132 3e-29
AY430945_1(AY430945|pid:none) Uncultured prokaryote clone 729-4_... 131 6e-29
AY430977_1(AY430977|pid:none) Uncultured prokaryote clone 694-3 ... 130 1e-28
AY308596_1(AY308596|pid:none) Uncultured episymbiont of Alvinell... 130 1e-28
AY430953_1(AY430953|pid:none) Uncultured prokaryote clone 820-D8... 130 2e-28
AY308591_1(AY308591|pid:none) Uncultured episymbiont of Alvinell... 130 2e-28
AY308589_1(AY308589|pid:none) Uncultured episymbiont of Alvinell... 129 2e-28
AY308635_1(AY308635|pid:none) Uncultured episymbiont of Alvinell... 129 3e-28
AY308616_1(AY308616|pid:none) Uncultured episymbiont of Alvinell... 129 3e-28
EF644671_1(EF644671|pid:none) Uncultured prokaryote clone BSaclB... 129 3e-28
AY430958_1(AY430958|pid:none) Uncultured prokaryote clone 820-C1... 129 4e-28
AY430948_1(AY430948|pid:none) Uncultured prokaryote clone 828-2 ... 129 4e-28
AY430964_1(AY430964|pid:none) Uncultured prokaryote clone 820-A6... 129 4e-28
AY430987_1(AY430987|pid:none) Uncultured prokaryote clone 2F10 A... 129 4e-28
AY430952_1(AY430952|pid:none) Uncultured prokaryote clone 827-2 ... 129 4e-28
EF644672_1(EF644672|pid:none) Uncultured prokaryote clone BSaclB... 128 5e-28
AY308587_1(AY308587|pid:none) Uncultured episymbiont of Alvinell... 128 5e-28
AY430978_1(AY430978|pid:none) Uncultured prokaryote clone 694-2 ... 128 6e-28
AY430968_1(AY430968|pid:none) Uncultured prokaryote clone 694-13... 128 6e-28
AY885677_1(AY885677|pid:none) Thiomicrospira denitrificans ATP c... 128 6e-28
AY430943_1(AY430943|pid:none) Uncultured prokaryote clone 729-4_... 128 6e-28
AY430941_1(AY430941|pid:none) Uncultured prokaryote clone 729-4_... 128 6e-28
AY308640_1(AY308640|pid:none) Candidatus Arcobacter sulfidicus A... 127 8e-28
AY430967_1(AY430967|pid:none) Uncultured prokaryote clone 694-14... 127 8e-28
AY308612_1(AY308612|pid:none) Uncultured episymbiont of Alvinell... 127 1e-27
AY308590_1(AY308590|pid:none) Uncultured episymbiont of Alvinell... 127 1e-27
AY308626_1(AY308626|pid:none) Uncultured episymbiont of Alvinell... 127 1e-27
AY308599_1(AY308599|pid:none) Uncultured episymbiont of Alvinell... 127 1e-27
AY430990_1(AY430990|pid:none) Uncultured prokaryote clone 2E09 A... 126 2e-27
EF644677_1(EF644677|pid:none) Uncultured prokaryote clone BSaclB... 126 2e-27
AY430940_1(AY430940|pid:none) Uncultured prokaryote clone 729-4_... 126 2e-27
AY308628_1(AY308628|pid:none) Uncultured episymbiont of Alvinell... 126 2e-27
AY308617_1(AY308617|pid:none) Uncultured episymbiont of Alvinell... 126 2e-27
AM181291_1(AM181291|pid:none) Uncultured epsilon proteobacterium... 126 2e-27
AY430982_1(AY430982|pid:none) Uncultured prokaryote clone 690-39... 126 2e-27
AY430954_1(AY430954|pid:none) Uncultured prokaryote clone 820-D5... 126 2e-27
AY308623_1(AY308623|pid:none) Uncultured episymbiont of Alvinell... 125 3e-27
AM181248_1(AM181248|pid:none) Uncultured epsilon proteobacterium... 125 3e-27
EU265781_1(EU265781|pid:none) Uncultured epsilon proteobacterium... 125 4e-27
AY308625_1(AY308625|pid:none) Uncultured episymbiont of Alvinell... 125 5e-27
AY308618_1(AY308618|pid:none) Uncultured episymbiont of Alvinell... 124 7e-27
AY430989_1(AY430989|pid:none) Uncultured prokaryote clone 2E10 A... 124 7e-27
AM181247_1(AM181247|pid:none) Uncultured epsilon proteobacterium... 124 7e-27
AY430949_1(AY430949|pid:none) Uncultured prokaryote clone 827-5 ... 124 7e-27
AY430962_1(AY430962|pid:none) Uncultured prokaryote clone 820-A1... 124 7e-27
AY430947_1(AY430947|pid:none) Uncultured prokaryote clone 828-1 ... 124 7e-27
AY308615_1(AY308615|pid:none) Uncultured episymbiont of Alvinell... 124 7e-27
AY308620_1(AY308620|pid:none) Uncultured episymbiont of Alvinell... 124 9e-27
EU265783_1(EU265783|pid:none) Uncultured epsilon proteobacterium... 124 1e-26
AY308601_1(AY308601|pid:none) Uncultured episymbiont of Alvinell... 124 1e-26
AM181263_1(AM181263|pid:none) Uncultured epsilon proteobacterium... 123 2e-26
AM181285_1(AM181285|pid:none) Uncultured epsilon proteobacterium... 122 3e-26
AY308622_1(AY308622|pid:none) Uncultured episymbiont of Alvinell... 122 3e-26
AM181261_1(AM181261|pid:none) Uncultured epsilon proteobacterium... 122 3e-26
AM181266_1(AM181266|pid:none) Uncultured epsilon proteobacterium... 122 5e-26
AM181267_1(AM181267|pid:none) Uncultured epsilon proteobacterium... 122 5e-26
AY430983_1(AY430983|pid:none) Uncultured prokaryote clone 2h09 A... 121 6e-26
AY430973_1(AY430973|pid:none) Uncultured prokaryote clone 694-8 ... 121 6e-26
EU265782_1(EU265782|pid:none) Uncultured epsilon proteobacterium... 120 1e-25
AY553060_1(AY553060|pid:none) Epsilon proteobacterium 899-3 AclB... 119 2e-25
AY430985_1(AY430985|pid:none) Uncultured prokaryote clone 2G10 A... 118 5e-25
AY553054_1(AY553054|pid:none) Epsilon proteobacterium 899-1 AclB... 118 7e-25
AM403116_1(AM403116|pid:none) Uncultured prokaryote partial aclb... 116 2e-24
EF644765_1(EF644765|pid:none) Nautilia sp. MT3 ATP citrate lyase... 113 2e-23
EF644670_1(EF644670|pid:none) Uncultured prokaryote clone BSaclB... 110 1e-22
AY308633_1(AY308633|pid:none) Uncultured episymbiont of Alvinell... 110 1e-22
AM403105_1(AM403105|pid:none) Uncultured prokaryote partial aclb... 108 4e-22
EF644831_1(EF644831|pid:none) Enrichment culture clone RaclB21 A... 107 9e-22
AM403120_1(AM403120|pid:none) Uncultured prokaryote partial aclb... 107 9e-22
AM403104_1(AM403104|pid:none) Uncultured prokaryote partial aclb... 107 9e-22
EF644770_1(EF644770|pid:none) Caminibacter hydrogeniphilus ATP c... 107 9e-22
AM403106_1(AM403106|pid:none) Uncultured prokaryote partial aclb... 107 1e-21
AM403110_1(AM403110|pid:none) Uncultured prokaryote partial aclb... 107 1e-21
EF644675_1(EF644675|pid:none) Uncultured prokaryote clone BSaclB... 107 1e-21
EF644674_1(EF644674|pid:none) Uncultured prokaryote clone BSaclB... 107 2e-21
EF644676_1(EF644676|pid:none) Uncultured prokaryote clone BSaclB... 107 2e-21
AM403107_1(AM403107|pid:none) Uncultured prokaryote partial aclb... 107 2e-21
EF644768_1(EF644768|pid:none) Caminibacter mediatlanticus ATP ci... 106 2e-21
AM403109_1(AM403109|pid:none) Uncultured prokaryote partial aclb... 106 3e-21
AM403103_1(AM403103|pid:none) Uncultured prokaryote partial aclb... 105 3e-21
AM403118_1(AM403118|pid:none) Uncultured prokaryote partial aclb... 105 6e-21
EF644767_1(EF644767|pid:none) Nautilia sp. MT5 ATP citrate lyase... 103 2e-20
AM403115_1(AM403115|pid:none) Uncultured prokaryote partial aclb... 103 2e-20
EF644673_1(EF644673|pid:none) Uncultured prokaryote clone BSaclB... 102 4e-20
AM403108_1(AM403108|pid:none) Uncultured prokaryote partial aclb... 101 6e-20
AM259544_1(AM259544|pid:none) Sulfurihydrogenibium sp. GV2-1C1 p... 100 2e-19
AM259548_1(AM259548|pid:none) Sulfurihydrogenibium sp. 153IV-9 p... 99 3e-19
AM259549_1(AM259549|pid:none) Sulfurihydrogenibium sp. Y04ANG1 p... 99 4e-19
AM259542_1(AM259542|pid:none) Sulfurihydrogenibium azorense part... 96 3e-18
AM259540_1(AM259540|pid:none) Sulfurihydrogenibium yellowstonens... 96 3e-18
AM259547_1(AM259547|pid:none) Sulfurihydrogenibium sp. UZ3-5 par... 95 6e-18
EF644766_1(EF644766|pid:none) Nautilia sp. MT4 ATP citrate lyase... 94 1e-17
AM259546_1(AM259546|pid:none) Sulfurihydrogenibium sp. UZ1-1C2 p... 93 3e-17
EF644771_1(EF644771|pid:none) Caminibacter profundus ATP citrate... 92 7e-17
CP000471_3595(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 87 1e-15
(Q4FP29) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 87 2e-15
(Q57663) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 85 8e-15
CP000148_300(CP000148|pid:none) Geobacter metallireducens GS-15,... 84 1e-14
CP001391_1004(CP001391|pid:none) Wolbachia sp. wRi, complete gen... 84 1e-14
AK304802_1(AK304802|pid:none) Homo sapiens cDNA FLJ55447 complet... 84 1e-14
CP001401_274(CP001401|pid:none) Sulfolobus islandicus M.16.27, c... 81 9e-14
CP001400_272(CP001400|pid:none) Sulfolobus islandicus M.14.25, c... 81 1e-13
(Q73FW3) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 80 2e-13
CP000682_1560(CP000682|pid:none) Metallosphaera sedula DSM 5348,... 80 2e-13
DQ017892_1(DQ017892|pid:none) Endosymbiont of Alviniconcha sp. c... 80 2e-13
DQ017891_1(DQ017891|pid:none) Endosymbiont of Alviniconcha sp. c... 80 3e-13
(Q6MBM7) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 80 3e-13
CP000243_4532(CP000243|pid:none) Escherichia coli UTI89, complet... 80 3e-13
CP001089_2691(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 79 3e-13
AE006641_2269(AE006641|pid:none) Sulfolobus solfataricus P2, com... 79 4e-13
(A4SZY0) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 79 6e-13
(A8MM16) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 78 8e-13
AC079675_5(AC079675|pid:none) Arabidopsis thaliana chromosome 1 ... 78 8e-13
(Q122H7) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 78 1e-12
CP001013_2688(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 77 2e-12
CP001635_5131(CP001635|pid:none) Variovorax paradoxus S110 chrom... 77 2e-12
CP000450_212(CP000450|pid:none) Nitrosomonas eutropha C91, compl... 76 3e-12
CP000867_1548(CP000867|pid:none) Methanococcus maripaludis C6, c... 76 4e-12
AL954747_50(AL954747|pid:none) Nitrosomonas europaea ATCC 19718,... 75 5e-12
(B4U901) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 75 5e-12
(B2V8I4) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 75 6e-12
(A4IM83) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 75 6e-12
CP000698_3924(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 75 6e-12
AJ621270_1(AJ621270|pid:none) Thermoproteus tenax sucC gene for ... 75 6e-12
CP000352_469(CP000352|pid:none) Ralstonia metallidurans CH34, co... 75 8e-12
CU633749_497(CU633749|pid:none) Cupriavidus taiwanensis str. LMG... 74 1e-11
CP001230_1121(CP001230|pid:none) Persephonella marina EX-H1, com... 74 1e-11
(A1TW81) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 74 1e-11
CP001068_462(CP001068|pid:none) Ralstonia pickettii 12J chromoso... 74 2e-11
(Q1D6I9) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 73 2e-11
(Q5FH54) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 73 2e-11
CP000884_868(CP000884|pid:none) Delftia acidovorans SPH-1, compl... 73 2e-11
CP001638_1017(CP001638|pid:none) Geobacillus sp. WCH70, complete... 73 2e-11
(A9IKE3) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 73 2e-11
(Q5L0N7) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 73 3e-11
CT573073_197(CT573073|pid:none) Kuenenia stuttgartiensis genome ... 73 3e-11
(A0RPE8) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 73 3e-11
CP001635_4430(CP001635|pid:none) Variovorax paradoxus S110 chrom... 72 4e-11
(B0RPQ9) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 72 4e-11
(Q5HC25) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 72 4e-11
BA000002_732(BA000002|pid:none) Aeropyrum pernix K1 DNA, complet... 72 5e-11
B72706(B72706)probable succinyl-CoA synthetase beta chain APE106... 72 5e-11
(A6Q391) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 72 7e-11
BX950229_1105(BX950229|pid:none) Methanococcus maripaludis strai... 72 7e-11
AP009385_2552(AP009385|pid:none) Burkholderia multivorans ATCC 1... 71 9e-11
(Q3ATR4) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 71 9e-11
CP000745_353(CP000745|pid:none) Methanococcus maripaludis C7, co... 71 1e-10
(A1AZH7) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 71 1e-10
(Q1IJS5) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 70 2e-10
CP001124_258(CP001124|pid:none) Geobacter bemidjiensis Bem, comp... 70 2e-10
(A4JHJ8) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 70 2e-10
(Q1AWI8) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 70 2e-10
(Q8PHL5) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 70 2e-10
(A1VYP2) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 70 2e-10
CP000922_1730(CP000922|pid:none) Anoxybacillus flavithermus WK1,... 70 2e-10
(O94415) RecName: Full=Probable succinyl-CoA ligase [GDP-forming... 70 2e-10
(A8EYY8) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 70 2e-10
AM295250_877(AM295250|pid:none) Staphylococcus carnosus subsp. c... 70 2e-10
CP000127_671(CP000127|pid:none) Nitrosococcus oceani ATCC 19707,... 70 3e-10
CP000698_153(CP000698|pid:none) Geobacter uraniireducens Rf4, co... 70 3e-10
CP001140_1038(CP001140|pid:none) Desulfurococcus kamchatkensis 1... 70 3e-10
(A7H4K9) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 69 4e-10
(Q3BQ83) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 69 4e-10
(A3DLR9) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 69 4e-10
(Q5HVN3) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 69 4e-10
BA000035_2446(BA000035|pid:none) Corynebacterium efficiens YS-31... 69 5e-10
(Q31FV4) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 69 6e-10
CP000103_1073(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 69 6e-10
(O82662) RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit... 69 6e-10
CP001034_2362(CP001034|pid:none) Natranaerobius thermophilus JW/... 69 6e-10
AE000657_904(AE000657|pid:none) Aquifex aeolicus VF5, complete g... 69 6e-10
CU861906_561(CU861906|pid:none) Ralstonia solanacearum strain Mo... 68 8e-10
(Q6GHJ0) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 68 8e-10
(A9N8R8) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 68 8e-10
(A8FKV6) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 68 8e-10
(Q8Y1Y3) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 68 8e-10
(Q6MGW1) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 68 8e-10
(Q02K73) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 68 1e-09
(B0KNW8) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 68 1e-09
(A9KBQ4) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 68 1e-09
AM181176_1782(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 68 1e-09
(Q3KFU6) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 68 1e-09
(A1UQV9) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 67 1e-09
EF530042_1(EF530042|pid:none) Caragana jubata succinyl-CoA ligas... 67 1e-09
CP001052_3230(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 67 1e-09
AM490515_1(AM490515|pid:none) Herbaspirillum seropedicae sucC ge... 67 1e-09
CP000148_721(CP000148|pid:none) Geobacter metallireducens GS-15,... 67 1e-09
CP001097_1867(CP001097|pid:none) Chlorobium limicola DSM 245, co... 67 1e-09
(Q3YSV6) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 67 1e-09
DQ294279_1(DQ294279|pid:none) Solanum tuberosum clone 180E05 suc... 67 1e-09
(A5ISD0) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 67 1e-09
(A0LIY8) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 67 1e-09
(A1KAU3) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 67 1e-09
CP001612_481(CP001612|pid:none) Rickettsia africae ESF-5, comple... 67 2e-09
CP000450_585(CP000450|pid:none) Nitrosomonas eutropha C91, compl... 67 2e-09
(Q4ULQ7) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 67 2e-09
(Q4KFY6) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 67 2e-09
FM872307_839(FM872307|pid:none) Chlamydia trachomatis B/TZ1A828/... 67 2e-09
CP001001_3615(CP001001|pid:none) Methylobacterium radiotolerans ... 66 3e-09
FM872308_838(FM872308|pid:none) Chlamydia trachomatis JALI20 ser... 66 3e-09
(Q3IGW5) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 66 3e-09
(Q0KE75) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 66 3e-09
CP001472_2480(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 66 3e-09
AY087596_1(AY087596|pid:none) Arabidopsis thaliana clone 36904 m... 66 3e-09
(B1JAV3) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 66 3e-09
(B7UVD3) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 66 3e-09
CP000102_1338(CP000102|pid:none) Methanosphaera stadtmanae DSM 3... 66 4e-09
(A4XV90) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 66 4e-09
CP000859_74(CP000859|pid:none) Desulfococcus oleovorans Hxd3, co... 66 4e-09
(B5EMG2) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 65 5e-09
AE009439_731(AE009439|pid:none) Methanopyrus kandleri AV19, comp... 65 5e-09
(Q30RQ3) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 65 5e-09
AP009384_4015(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 65 7e-09
(Q87A98) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 65 7e-09
CP000941_1922(CP000941|pid:none) Xylella fastidiosa M12, complet... 65 7e-09
(Q96I99) RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit... 65 9e-09
(O28097) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 65 9e-09
(A1WZ92) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 65 9e-09
(A7NNW3) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 65 9e-09
(A3MWQ7) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 64 1e-08
(A5V080) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 64 1e-08
(A3PN13) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 64 1e-08
(A4WNM6) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 64 1e-08
(Q0VPF7) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 64 1e-08
CP000777_1956(CP000777|pid:none) Leptospira biflexa serovar Pato... 64 1e-08
CP000141_889(CP000141|pid:none) Carboxydothermus hydrogenoforman... 64 1e-08
CP001227_87(CP001227|pid:none) Rickettsia peacockii str. Rustic,... 64 1e-08
BT039713_1(BT039713|pid:none) Zea mays full-length cDNA clone ZM... 64 1e-08
(Q1RH55) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 64 1e-08
AB124582_4(AB124582|pid:none) Hydrogenobacter thermophilus genes... 64 1e-08
(A8GUV0) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 64 1e-08
AB221128_1(AB221128|pid:none) Pelotomaculum thermopropionicum mm... 64 1e-08
(Q482S1) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 64 1e-08
(Q5HPU5) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 64 1e-08
(B1YIL7) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 64 2e-08
CP000555_3248(CP000555|pid:none) Methylibium petroleiphilum PM1,... 64 2e-08
L06944_1(L06944|pid:none) Sus scrofa succinyl-CoA synthetase bet... 64 2e-08
CP000698_4274(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 64 2e-08
A44529(A44529)succinate-CoA ligase (GDP-forming) (EC 6.2.1.4) be... 64 2e-08
AY967152_1(AY967152|pid:none) Synthetic construct isolate FTT050... 64 2e-08
(Q65JP0) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 64 2e-08
(A8FD73) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 63 3e-08
(Q255N7) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 63 3e-08
(Q8A9M7) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 63 3e-08
(Q68WU5) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 63 3e-08
(Q14IV5) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 63 3e-08
CR380952_334(CR380952|pid:none) Candida glabrata strain CBS138 c... 63 3e-08
(A7NDR1) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 63 3e-08
CP000915_1117(CP000915|pid:none) Francisella tularensis subsp. m... 63 3e-08
(Q6K9N6) RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit... 63 3e-08
AM494972_317(AM494972|pid:none) Leishmania braziliensis chromoso... 62 4e-08
CP000394_52(CP000394|pid:none) Granulibacter bethesdensis CGDNIH... 62 4e-08
BT030582_1(BT030582|pid:none) Bos taurus Homo sapiens similar to... 62 6e-08
(O05966) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 62 6e-08
(A8GNF5) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 62 6e-08
(A7GYI5) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 62 7e-08
(A4VKQ1) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 62 7e-08
BC160886_1(BC160886|pid:none) Rattus norvegicus succinate-CoA li... 62 7e-08
(Q5WFP4) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 62 7e-08
BC099746_1(BC099746|pid:none) Rattus norvegicus succinate-CoA li... 62 7e-08
CP001336_189(CP001336|pid:none) Desulfitobacterium hafniense DCB... 62 7e-08
(Q47AN8) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 62 7e-08
BC089863_1(BC089863|pid:none) Rattus norvegicus succinate-CoA li... 62 7e-08
(Q6ARL2) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 61 1e-07
AP007157_319(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 61 1e-07
CP001014_1430(CP001014|pid:none) Thermoproteus neutrophilus V24S... 61 1e-07
(Q5L593) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 61 1e-07
CP000908_1769(CP000908|pid:none) Methylobacterium extorquens PA1... 61 1e-07
AE014296_1024(AE014296|pid:none) Drosophila melanogaster chromos... 61 1e-07
CP001281_883(CP001281|pid:none) Thauera sp. MZ1T, complete genome. 61 1e-07
(A4FP60) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 61 1e-07
CP000781_489(CP000781|pid:none) Xanthobacter autotrophicus Py2, ... 61 1e-07
AE017282_907(AE017282|pid:none) Methylococcus capsulatus str. Ba... 61 1e-07
AP009484_833(AP009484|pid:none) Macrococcus caseolyticus JCSC540... 61 1e-07
(Q87RE8) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 61 1e-07
CP000934_1471(CP000934|pid:none) Cellvibrio japonicus Ueda107, c... 61 1e-07
AP008230_245(AP008230|pid:none) Desulfitobacterium hafniense Y51... 61 1e-07
(A4WL16) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 60 2e-07
(A5UIW0) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 60 2e-07
(P53594) RecName: Full=Malate--CoA ligase subunit beta; ... 60 2e-07
(Q6G1M1) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 60 2e-07
(B6JE33) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 60 2e-07
CP000750_3970(CP000750|pid:none) Kineococcus radiotolerans SRS30... 60 2e-07
(Q5LCW4) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 60 2e-07
CP000943_2036(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 60 2e-07
CP001196_2696(CP001196|pid:none) Oligotropha carboxidovorans OM5... 60 2e-07
(Q4QLA3) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 60 2e-07
(A5UCR4) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 60 3e-07
(Q15UW6) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 60 3e-07
(A5VSQ3) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 60 3e-07
(P45101) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 59 4e-07
BX248583_314(BX248583|pid:none) Blochmannia floridanus complete ... 59 4e-07
CP001615_2881(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 59 4e-07
BC043312_1(BC043312|pid:none) Mus musculus succinate-Coenzyme A ... 59 4e-07
(A0KJK9) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 59 4e-07
CP001103_1861(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 59 4e-07
(B3Q760) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 59 4e-07
(Q4FVH9) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 59 5e-07
(P53589) RecName: Full=Probable succinyl-CoA ligase [GDP-forming... 59 5e-07
BA000023_1041(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 59 5e-07
(Q3SKM1) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 59 5e-07
CP001099_1466(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,... 59 6e-07
CP001349_6804(CP001349|pid:none) Methylobacterium nodulans ORS 2... 59 6e-07
(A5WC33) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 59 6e-07
(Q822A1) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 59 6e-07
(Q2W063) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 59 6e-07
(A0LZD4) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 59 6e-07
(A5EX54) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 59 6e-07
CP000968_1378(CP000968|pid:none) Candidatus Korarchaeum cryptofi... 58 8e-07
AF058956_1(AF058956|pid:none) Mus musculus GTP-specific succinyl... 58 8e-07
CP001110_709(CP001110|pid:none) Pelodictyon phaeoclathratiforme ... 58 8e-07
BC108802_1(BC108802|pid:none) Xenopus laevis hypothetical protei... 58 8e-07
BC084473_1(BC084473|pid:none) Xenopus tropicalis hypothetical LO... 58 8e-07
(Q2S3H9) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 58 8e-07
(Q0HJQ4) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 58 1e-06
CP000781_154(CP000781|pid:none) Xanthobacter autotrophicus Py2, ... 58 1e-06
CP001277_1700(CP001277|pid:none) Candidatus Hamiltonella defensa... 58 1e-06
(B5ZSR9) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 57 1e-06
CP000463_3177(CP000463|pid:none) Rhodopseudomonas palustris BisA... 57 1e-06
CP001029_1554(CP001029|pid:none) Methylobacterium populi BJ001, ... 57 1e-06
EU016581_6(EU016581|pid:none) Uncultured marine microorganism HF... 57 1e-06
(A9GD65) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 57 2e-06
CP000771_1352(CP000771|pid:none) Fervidobacterium nodosum Rt17-B... 57 2e-06
CP001298_1819(CP001298|pid:none) Methylobacterium chloromethanic... 57 2e-06
(Q28U74) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 57 2e-06
(Q6F8L4) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 57 2e-06
(A1APQ8) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 57 2e-06
CP000908_1614(CP000908|pid:none) Methylobacterium extorquens PA1... 57 2e-06
(Q1QQR3) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 57 2e-06
CP001280_1678(CP001280|pid:none) Methylocella silvestris BL2, co... 57 2e-06
(A1TZS9) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 57 2e-06
CP000362_3952(CP000362|pid:none) Roseobacter denitrificans OCh 1... 57 2e-06
CU459003_926(CU459003|pid:none) Magnetospirillum gryphiswaldense... 57 2e-06
CP001349_1078(CP001349|pid:none) Methylobacterium nodulans ORS 2... 57 2e-06
(P53312) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 57 2e-06
(Q0S533) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 56 3e-06
CP001365_2178(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 56 3e-06
(Q9P567) RecName: Full=Probable succinyl-CoA ligase [GDP-forming... 56 3e-06
(A6TKJ3) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 56 3e-06
CP000088_2570(CP000088|pid:none) Thermobifida fusca YX, complete... 56 3e-06
AP008230_1926(AP008230|pid:none) Desulfitobacterium hafniense Y5... 56 3e-06
(B7HDV9) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 56 4e-06
(A3QDH6) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 56 4e-06
(A7N158) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 56 4e-06
(Q04QS3) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 56 4e-06
(Q07UX6) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 56 4e-06
(A1KH85) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 56 4e-06
CP000852_1193(CP000852|pid:none) Caldivirga maquilingensis IC-16... 55 5e-06
(A5E936) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 55 5e-06
(A5CC52) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 55 5e-06
AP011115_5642(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 55 5e-06
CP001390_241(CP001390|pid:none) Geobacter sp. FRC-32, complete g... 55 5e-06
(A0KVX6) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 55 7e-06
BC019868_1(BC019868|pid:none) Homo sapiens, clone IMAGE:4996134,... 55 7e-06
(Q9RUY3) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 55 7e-06
AP008981_1349(AP008981|pid:none) Orientia tsutsugamushi str. Ike... 55 7e-06
CP001337_2020(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 55 7e-06
(A1R3M0) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 55 7e-06
CU468230_727(CU468230|pid:none) Acinetobacter baumannii str. SDF... 55 9e-06
(A0RHK9) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 55 9e-06
CP001032_4214(CP001032|pid:none) Opitutus terrae PB90-1, complet... 55 9e-06
(A5U0Z1) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 55 9e-06
(A3M887) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 55 9e-06
(A9VT74) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 54 1e-05
(A4YKC6) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 54 1e-05
CP001157_2872(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 54 1e-05
BA000011_275(BA000011|pid:none) Thermoplasma volcanium GSS1 DNA,... 54 1e-05
(Q9EYG9) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 54 2e-05
CP000830_2862(CP000830|pid:none) Dinoroseobacter shibae DFL 12, ... 54 2e-05
CP000961_1822(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 54 2e-05
(Q89X60) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 54 2e-05
(Q819X0) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 54 2e-05
CP001100_2246(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 54 2e-05
(Q1MAW1) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 53 3e-05
(A8FX46) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 53 3e-05
(Q7UKI3) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 53 3e-05
BX294152_3(BX294152|pid:none) Rhodopirellula baltica SH 1 comple... 53 3e-05
CP001338_1854(CP001338|pid:none) Candidatus Methanosphaerula pal... 53 3e-05
CP000353_737(CP000353|pid:none) Ralstonia metallidurans CH34 meg... 53 3e-05
CT573213_1119(CT573213|pid:none) Frankia alni str. ACN14A chromo... 53 3e-05
CP001074_4114(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 53 3e-05
(Q5X7K6) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 53 3e-05
CP000866_1119(CP000866|pid:none) Nitrosopumilus maritimus SCM1, ... 53 3e-05
BA000021_417(BA000021|pid:none) Wigglesworthia glossinidia endos... 53 3e-05
AP008957_4429(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 52 4e-05
AK294598_1(AK294598|pid:none) Homo sapiens cDNA FLJ50080 complet... 52 4e-05
CP001341_924(CP001341|pid:none) Arthrobacter chlorophenolicus A6... 52 4e-05
FM992695_594(FM992695|pid:none) Candida dubliniensis CD36 chromo... 52 4e-05
(Q2N695) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 52 6e-05
AE017341_719(AE017341|pid:none) Cryptococcus neoformans var. neo... 52 6e-05
(Q0I3A8) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 52 6e-05
CP000930_391(CP000930|pid:none) Heliobacterium modesticaldum Ice... 52 8e-05
CP000716_1822(CP000716|pid:none) Thermosipho melanesiensis BI429... 52 8e-05
(Q11CV8) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 51 1e-04
CP000362_1505(CP000362|pid:none) Roseobacter denitrificans OCh 1... 51 1e-04
(A9M4F8) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 51 1e-04
(Q2K3F0) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 51 1e-04
AC115594_9(AC115594|pid:none) Dictyostelium discoideum chromosom... 51 1e-04
(A7MQX5) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 51 1e-04
CP000769_3683(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 51 1e-04
(Q55AI5) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 51 1e-04
AE014297_861(AE014297|pid:none) Drosophila melanogaster chromoso... 50 2e-04
CP000687_454(CP000687|pid:none) Actinobacillus pleuropneumoniae ... 50 2e-04
AY849649_1(AY849649|pid:none) Magnaporthe grisea succinyl-CoA li... 50 2e-04
DQ200398_1(DQ200398|pid:none) Solanum tuberosum clone 071C05 suc... 50 2e-04
BA000030_3459(BA000030|pid:none) Streptomyces avermitilis MA-468... 50 2e-04
CP000628_3272(CP000628|pid:none) Agrobacterium radiobacter K84 c... 50 2e-04
CP000016_321(CP000016|pid:none) Candidatus Blochmannia pennsylva... 50 3e-04
(O87840) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 50 3e-04
(Q5YPP8) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 49 4e-04
(Q98EC5) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 49 4e-04
DQ780077_1(DQ780077|pid:none) Endoriftia persephone 'Hot96_1+Hot... 49 4e-04
(Q9JZP4) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 49 5e-04
BC166998_1(BC166998|pid:none) Rattus norvegicus succinate-CoA li... 49 5e-04
AM910995_189(AM910995|pid:none) Plasmodium knowlesi strain H chr... 49 6e-04
AM942759_564(AM942759|pid:none) Proteus mirabilis strain HI4320,... 49 6e-04
CP000496_535(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 48 8e-04
(Q3INN3) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 48 8e-04
(P53587) RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit... 48 8e-04
(A3MZH0) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 48 8e-04
AB196983_3(AB196983|pid:none) Acidithiobacillus thiooxidans aco,... 48 8e-04
(Q2IIC1) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 48 0.001
CP000112_2330(CP000112|pid:none) Desulfovibrio desulfuricans G20... 48 0.001
(Q5V4Q4) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 48 0.001
(Q9JUT0) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 48 0.001
(A1KTM6) RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit... 48 0.001

>AJ344108_1(AJ344108|pid:none) Lupinus albus mRNA for ATP citrate
lyase b-subunit (aclb gene).
Length = 423

Score = 451 bits (1160), Expect = e-125
Identities = 230/428 (53%), Positives = 306/428 (71%), Gaps = 1/428 (0%)
Frame = +3

Query: 147 MAXKKLREYSTKYIIKNNFALSCNGSKLNLKMIQVSPTTPTLIELSKSIDNIWVNNSKLV 326
MA KK+REY +K ++K ++ +G+ L +K QV+ TT EL + W+++SKLV
Sbjct: 1 MARKKIREYDSKRLLKEHYK-RLSGNDLPIKSAQVTETTD-FTELQEK--EPWLSSSKLV 56

Query: 327 VKPDMLFGKRGKNGLVLLNATLEEADKFIKEKINKPVEIGGKSGLVTHFIVEPFLPHTEE 506
VKPDMLFGKRGK+GLV LN L + F+KE++ VE+ G G +T FIVEPF+PH EE
Sbjct: 57 VKPDMLFGKRGKSGLVALNLDLAQVASFVKERLGNEVEMSGCKGPITTFIVEPFIPHNEE 116

Query: 507 YYLSITAERESNRISFSNCGGMEIEENWDKVSSIEIPYGESID*FDLHTIIDS-SVQNRE 683
+YL+I ++R N ISFS CGG+EIEENWDKV ++ +P G S+ + ++ + ++ +
Sbjct: 117 FYLNIVSDRLGNSISFSECGGIEIEENWDKVKTVFVPTGVSLTSEIIAPLVATLPLEIKG 176

Query: 684 YVIDFIRNVYKLFNDLSFHFIEMNPFTLDAEGKPYPLDARGEVDECASFKCGGRWLVDGE 863
+ +F++ ++ LF DL F F+EMNPFTL +GKPYPLD RGE+D+ A+FK +W
Sbjct: 177 EIEEFLKVIFNLFQDLDFTFLEMNPFTL-VDGKPYPLDMRGELDDTAAFKNFKKW----G 231

Query: 864 PVQFPQPFGRSLYPEETYVNEIDEKTGASLKLTLLNPKGRIWAMVAGGGASVIYADTVAD 1043
++FP PFGR + P E++++ +DEKT ASLK T+LNPKGRIW MVAGGGASVIYADTV D
Sbjct: 232 NIEFPLPFGRVMSPTESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGD 291

Query: 1044 LGFGNELGNYGEYSGDPNEEDTHKYACTLISLATRNPDSRPRALLIGGGIANFTDVAATF 1223
LGF NELGNY EYSG P E++ +YA +I AT NPD + RAL++GGGIANFTDVAATF
Sbjct: 292 LGFANELGNYAEYSGAPKEDEVLQYARVVIDCATANPDGQKRALVVGGGIANFTDVAATF 351

Query: 1224 KGIIRAIKEYHDDIIKSNLSIFVRRGGPNYQSGLQHMREIGHKLHIPIKVFGPEVNMTSI 1403
GIIRA+KE + + + I+VRRGGPNYQ GL MRE+G ++ IPI+V+GPE MT I
Sbjct: 352 SGIIRALKEKESKLKAARMHIYVRRGGPNYQKGLAKMRELGEEIGIPIEVYGPEATMTGI 411

Query: 1404 VAMAIQHI 1427
AIQ I
Sbjct: 412 CKEAIQCI 419

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,369,326,381
Number of extensions: 48142335
Number of successful extensions: 133549
Number of sequences better than 10.0: 564
Number of HSP's gapped: 132846
Number of HSP's successfully gapped: 584
Length of query: 510
Length of database: 1,051,180,864
Length adjustment: 133
Effective length of query: 377
Effective length of database: 620,718,517
Effective search space: 234010880909
Effective search space used: 234010880909
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.44 alm: 0.38 top: 0.53 tms: 0.00 mit: 0.20 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

60.0 %: cytoplasmic
24.0 %: nuclear
8.0 %: vesicles of secretory system
4.0 %: cytoskeletal
4.0 %: mitochondrial

>> prediction for Contig-U12922-1 is cyt

VS (DIR, S) 3
VH (FL, L) 0
VF (FL, S) 12
AH (FL, L) 0
AF (FL, S) 2
SL (DIR, L) 1
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 4
CH (FL, L) 1
CF (FL, S) 5
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0