| Contig-U12921-1 |
| Contig ID |
Contig-U12921-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
643 |
| Chromosome number (1..6, M) |
4 |
| Chromosome length |
5430582 |
| Start point |
5195085 |
| End point |
5195728 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
2 |
| Number of EST |
2 |
| Link to clone list |
U12921 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.12. 4 |
| Homology vs DNA |
Query= Contig-U12921-1 (Contig-U12921-1Q) /CSM_Contig/Contig-U12921-1Q.Seq.d
(643 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ377341) Dictyostelium discoideum cDNA clone:ddc23p24, 3' ... 708 0.0 2
(BJ377089) Dictyostelium discoideum cDNA clone:ddc22f18, 3' ... 244 5e-85 2
(AP009664) Lotus japonicus genomic DNA, chromosome 1, clone:... 48 0.39 1
(AP009155) Lotus japonicus genomic DNA, chromosome 2, clone:... 48 0.39 1
(AP009154) Lotus japonicus genomic DNA, chromosome 2, clone:... 48 0.39 1
(EK011075) 1092955180680 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.39 1
(EJ114978) 1092343266346 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.39 1
(AL589932) Human DNA sequence from clone RP11-200E19 on chro... 40 0.56 4
(EK163259) 1095458040619 Global-Ocean-Sampling_GS-31-01-01-1... 42 0.93 2
(EJ788750) 1093017366680 Global-Ocean-Sampling_GS-30-02-01-1... 32 0.98 3
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 40 1.4 9
(AE017243) Mycoplasma hyopneumoniae J, complete genome. 32 1.5 12
(AC133059) Rattus norvegicus clone CH230-14O22, *** SEQUENCI... 46 1.5 1
(AC117025) Rattus norvegicus clone CH230-223G12, *** SEQUENC... 46 1.5 1
(AC108622) Rattus norvegicus clone CH230-266H16, *** SEQUENC... 46 1.5 1
(EK150029) 1095456044301 Global-Ocean-Sampling_GS-31-01-01-1... 46 1.5 1
(AC023104) Homo sapiens chromosome X clone RP11-733O18 map X... 42 1.9 4
(DQ333197) Spiroplasma kunkelii CR2-3x SkArp2 operon, comple... 40 2.3 2
(AC216595) Populus trichocarpa clone POP017-G14, complete se... 42 2.6 4
(ER620026) 1093017390649 Global-Ocean-Sampling_GS-36-01-01-2... 36 3.0 2
(AZ537747) ENTFE72TF Entamoeba histolytica Sheared DNA Entam... 32 4.0 2
(BH138314) ENTOE20TF Entamoeba histolytica Sheared DNA Entam... 32 4.0 2
(BD061520) Genome DNA of symbiotic bacteria of aphid. 38 4.6 7
(AR409405) Sequence 1 from patent US 6632935. 38 4.6 7
(BA000003) Buchnera aphidicola str. APS (Acyrthosiphon pisum... 38 4.6 7
(AE017263) Mesoplasma florum L1 complete genome. 34 4.8 13
(CR762444) Zebrafish DNA sequence from clone CH211-247J6 in ... 44 6.1 1
(AC140985) Mus musculus BAC clone RP23-60H23 from chromosome... 44 6.1 1
(AC198094) Pongo abelii BAC clone CH276-117L23 from chromoso... 44 6.1 1
(DI011475) Enterococcus faecalis polynucleotides and polypep... 44 6.1 1
(BD193504) Enterococcus faecialis polynucleotides and polype... 44 6.1 1
(AR395949) Sequence 1964 from patent US 6617156. 44 6.1 1
(Z50873) Caenorhabditis elegans Cosmid F17E5. 44 6.1 1
(AL360236) Human DNA sequence from clone RP11-380M3 on chrom... 44 6.1 1
(AC108110) Homo sapiens chromosome 5 clone RP11-265O6, compl... 44 6.1 1
(AC149848) Papio anubis clone RP41-213I2, WORKING DRAFT SEQU... 44 6.1 1
(AC137161) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 44 6.1 1
(AC102962) Rattus norvegicus clone CH230-170B17, *** SEQUENC... 44 6.1 1
(AC097983) Rattus norvegicus clone CH230-49I18, WORKING DRAF... 44 6.1 1
(AC094918) Rattus norvegicus clone CH230-6D3, *** SEQUENCING... 44 6.1 1
(AC209598) Chlorocebus aethiops clone CH252-275M1, WORKING D... 44 6.1 1
(AC189176) Colobus guereza clone CH272-289N6, WORKING DRAFT ... 44 6.1 1
(AC170196) Macaca mulatta clone CH250-420C15, WORKING DRAFT ... 44 6.1 1
(EK157158) 1095458009393 Global-Ocean-Sampling_GS-31-01-01-1... 44 6.1 1
(EJ482796) 1095403480504 Global-Ocean-Sampling_GS-28-01-01-1... 44 6.1 1
(ED431271) AUAC-aak27g11.b1 Ascaris suum whole genome shotgu... 44 6.1 1
(DH741707) Rattus norvegicus DNA, BAC clone: RNB1-316E01, 3'... 44 6.1 1
(DH737947) Rattus norvegicus DNA, BAC clone: RNB1-311C20, 5'... 44 6.1 1
(EH682531) CCIL7242.b1_D12.ab1 CCI(LMS) chicory Cichorium in... 44 6.1 1
(EG623748) EMBRYOF088220B22 POSSUM_01-POSSUM-C-EMBRYO-2KB Tr... 44 6.1 1
(EG614135) REPROTRACTF095445F14 POSSUM_01-POSSUM-C-REPROTRAC... 44 6.1 1
(AV331980) Mus musculus adult male medulla oblongata cDNA, R... 44 6.1 1
(CN448261) GUO_cDNA_35_22 Flower bud cDNA library from Lycor... 44 6.1 1
(BP833490) Arabidopsis thaliana cDNA clone:RAFL22-96-G18, 5'... 44 6.1 1
(FE587935) CAXG3123.rev Amphioxus Branchiostoma floridae unp... 44 6.1 1
(CP000568) Clostridium thermocellum ATCC 27405, complete gen... 44 6.1 1
(CP000563) Shewanella baltica OS155, complete genome. 44 6.1 1
(AP006628) Onion yellows phytoplasma OY-M DNA, complete genome. 44 6.1 1
(AM422018) Candidatus Phytoplasma australiense complete genome. 44 6.1 1
(AE016830) Enterococcus faecalis V583, complete genome. 44 6.1 1
(CW069152) 104_318_10525696_1_30095 Sorghum methylation filt... 40 6.7 2
(AF240627) Homo sapiens chromosome 21 map 21q21 clone B650K3... 38 7.8 2
(BM902413) rc35f06.y1 Meloidogyne hapla egg pAMP1 v1 Meloido... 40 8.1 2
(AL590127) Human DNA sequence from clone RP11-255C8 on chrom... 40 8.2 2
(CV193534) SnESTbab04f02.y1 Sarcocystis neurona merozoite UK... 38 8.4 2
(AL121781) Human DNA sequence from clone RP5-1164C1 on chrom... 32 8.6 6
(CP000233) Lactobacillus salivarius UCC118, complete genome. 32 9.0 14
(CR767821) Ehrlichia ruminantium strain Welgevonden, complet... 32 9.3 2
(CR925678) Ehrlichia ruminantium str. Welgevonden, complete ... 32 9.3 2
(EK411433) 1095505193327 Global-Ocean-Sampling_GS-31-01-01-1... 34 9.9 2
>(BJ377341) Dictyostelium discoideum cDNA clone:ddc23p24, 3' end,
single read.
Length = 644
Score = 708 bits (357), Expect(2) = 0.0
Identities = 360/360 (100%)
Strand = Plus / Minus
Query: 284 gtaatttcaattgatttcaataaaagagctttagaagcttttgaattaatggcaaataat 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtaatttcaattgatttcaataaaagagctttagaagcttttgaattaatggcaaataat 302
Query: 344 aaagtaaatggtattgcagtaaatgatgaaaaaggacatattattgcaaatattagtgca 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaagtaaatggtattgcagtaaatgatgaaaaaggacatattattgcaaatattagtgca 242
Query: 404 agagatttaaaagaattgttaaatgaaactagagtatttgaaaatttatacctttcagtt 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agagatttaaaagaattgttaaatgaaactagagtatttgaaaatttatacctttcagtt 182
Query: 464 ggtgaattcatttcaaaagttcgtcaacaagattacaaagctgttaatccttcaatttct 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtgaattcatttcaaaagttcgtcaacaagattacaaagctgttaatccttcaatttct 122
Query: 524 tgtcatatgaatgattctttggctaatattatcacaagaatggttgctgctaatattcat 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtcatatgaatgattctttggctaatattatcacaagaatggttgctgctaatattcat 62
Query: 584 cgtgtcttacattatagatgaagaaagaaangccaattggtgttattagcattcatgata 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgtgtcttacattatagatgaagaaagaaangccaattggtgttattagcattcatgata 2
Score = 545 bits (275), Expect(2) = 0.0
Identities = 275/275 (100%)
Strand = Plus / Minus
Query: 1 tttattcaatcacacatatgcatcctatgtaacggatctatcacaacgtaatcctttcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tttattcaatcacacatatgcatcctatgtaacggatctatcacaacgtaatcctttcat 585
Query: 61 accagttgtaaaaggtgcatcattattagaagcaatcactgttatgaccaagaatcaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 accagttgtaaaaggtgcatcattattagaagcaatcactgttatgaccaagaatcaaat 525
Query: 121 taatagagtaccagtaattgaaaacaatgttaatggtgaaggtgctcaaatcgttaatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 taatagagtaccagtaattgaaaacaatgttaatggtgaaggtgctcaaatcgttaatct 465
Query: 181 aatcactcaatctgccatcctctcttatcttggaaaaaacattgaacaacttggtaaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 aatcactcaatctgccatcctctcttatcttggaaaaaacattgaacaacttggtaaatg 405
Query: 241 gtctttaaaatcaattaaagatttaggttttaaag 275
|||||||||||||||||||||||||||||||||||
Sbjct: 404 gtctttaaaatcaattaaagatttaggttttaaag 370
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 772,148,230
Number of extensions: 46651760
Number of successful extensions: 3542072
Number of sequences better than 10.0: 71
Length of query: 643
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 620
Effective length of database: 93,106,754,628
Effective search space: 57726187869360
Effective search space used: 57726187869360
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7. 5 |
| Homology vs Protein |
Query= Contig-U12921-1 (Contig-U12921-1Q) /CSM_Contig/Contig-U12921-1Q.Seq.d
(643 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY054565_1(AY054565|pid:none) Arabidopsis thaliana Unknown prote... 87 4e-16
AK071912_1(AK071912|pid:none) Oryza sativa Japonica Group cDNA c... 77 4e-13
(Q8LBB2) RecName: Full=SNF1-related protein kinase regulatory su... 77 4e-13
AP003707_7(AP003707|pid:none) Oryza sativa Japonica Group genomi... 75 2e-12
BT070138_1(BT070138|pid:none) Zea mays full-length cDNA clone ZM... 74 5e-12
AP008207_1696(AP008207|pid:none) Oryza sativa (japonica cultivar... 72 1e-11
AM426713_6(AM426713|pid:none) Vitis vinifera contig VV78X080187.... 72 1e-11
BT041658_1(BT041658|pid:none) Zea mays full-length cDNA clone ZM... 71 3e-11
FM992693_358(FM992693|pid:none) Candida dubliniensis CD36 chromo... 70 4e-11
CP000497_253(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 68 3e-10
(A1CQZ4) RecName: Full=Protein sds23; 67 3e-10
AY247269_1(AY247269|pid:none) Medicago truncatula AKIN gamma mRN... 67 4e-10
BT052054_1(BT052054|pid:none) Medicago truncatula clone MTYF9_FA... 67 4e-10
EF016456_1(EF016456|pid:none) Chiloscyllium punctatum AMP-activa... 66 1e-09
AE016819_219(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 64 3e-09
BC109015_1(BC109015|pid:none) Mus musculus protein kinase, AMP-a... 64 5e-09
AB169499_1(AB169499|pid:none) Macaca fascicularis brain cDNA, cl... 64 5e-09
(P54619) RecName: Full=5'-AMP-activated protein kinase subunit g... 64 5e-09
AB174631_1(AB174631|pid:none) Macaca fascicularis brain cDNA clo... 64 5e-09
(Q09138) RecName: Full=5'-AMP-activated protein kinase subunit g... 64 5e-09
AK097606_1(AK097606|pid:none) Homo sapiens cDNA FLJ40287 fis, cl... 64 5e-09
DQ318140_1(DQ318140|pid:none) Equus caballus AMPK-activated prot... 64 5e-09
AP007154_417(AP007154|pid:none) Aspergillus oryzae RIB40 genomic... 63 8e-09
BC073621_1(BC073621|pid:none) Xenopus laevis MGC82938 protein, m... 63 8e-09
(P80385) RecName: Full=5'-AMP-activated protein kinase subunit g... 63 8e-09
AJ720277_1(AJ720277|pid:none) Gallus gallus mRNA for hypothetica... 62 1e-08
DQ212709_1(DQ212709|pid:none) Gallus gallus 5'-AMP-activated pro... 62 1e-08
DQ212708_1(DQ212708|pid:none) Gallus gallus 5'-AMP-activated pro... 62 1e-08
AY606033_1(AY606033|pid:none) Oncorhynchus mykiss 5'-AMP-activat... 61 2e-08
FM992688_771(FM992688|pid:none) Candida dubliniensis CD36 chromo... 61 2e-08
DQ318144_1(DQ318144|pid:none) Equus caballus AMPK-activated prot... 61 3e-08
EF584738_1(EF584738|pid:none) Petromyzon marinus AMP-activated p... 61 3e-08
AY693013_1(AY693013|pid:none) Saccharomyces cerevisiae clone FLH... 61 3e-08
Z72577_1(Z72577|pid:none) S.cerevisiae chromosome VII reading fr... 61 3e-08
AY376689_1(AY376689|pid:none) Equus caballus AMP-activated prote... 61 3e-08
(A6ZUC0) RecName: Full=Protein SDS23; 61 3e-08
AY423273_1(AY423273|pid:none) Equus caballus AMP-activated prote... 61 3e-08
AL033501_1(AL033501|pid:none) C.albicans cosmid Ca41C10. &T1822... 61 3e-08
EF584739_1(EF584739|pid:none) Petromyzon marinus AMP-activated p... 60 5e-08
AK069698_1(AK069698|pid:none) Oryza sativa Japonica Group cDNA c... 60 5e-08
(Q9UGI9) RecName: Full=5'-AMP-activated protein kinase subunit g... 60 7e-08
AY348864_1(AY348864|pid:none) Mus musculus AMP-activated protein... 60 7e-08
EF016455_1(EF016455|pid:none) Chiloscyllium punctatum AMP-activa... 60 7e-08
AK300078_1(AK300078|pid:none) Homo sapiens cDNA FLJ51967 complet... 60 7e-08
AX814738_1(AX814738|pid:none) Sequence 1 from Patent WO03063586. 60 7e-08
BC115291_1(BC115291|pid:none) Danio rerio zgc:136850, mRNA (cDNA... 60 7e-08
AF214519_1(AF214519|pid:none) Homo sapiens AMP-activated protein... 60 7e-08
BC097267_1(BC097267|pid:none) Rattus norvegicus protein kinase, ... 59 9e-08
AY376854_1(AY376854|pid:none) Rattus norvegicus adenosine monoph... 59 9e-08
AY348865_1(AY348865|pid:none) Rattus norvegicus AMP-activated pr... 59 9e-08
(A3LQC5) RecName: Full=Protein SDS23; &CP000496_912(CP000496|pi... 59 9e-08
AX398335_1(AX398335|pid:none) Sequence 5 from Patent WO0220850. 59 1e-07
AX099774_1(AX099774|pid:none) Sequence 1 from Patent WO0120003. 59 1e-07
AX398333_1(AX398333|pid:none) Sequence 3 from Patent WO0220850. 59 1e-07
AX398337_1(AX398337|pid:none) Sequence 7 from Patent WO0220850. 59 1e-07
AF214521_1(AF214521|pid:none) Sus scrofa AMPK gamma subunit (PRK... 59 1e-07
AX398339_1(AX398339|pid:none) Sequence 9 from Patent WO0220850. 59 1e-07
(Q9MYP4) RecName: Full=5'-AMP-activated protein kinase subunit g... 59 1e-07
(Q5R4S0) RecName: Full=5'-AMP-activated protein kinase subunit g... 59 2e-07
BC166111_1(BC166111|pid:none) Xenopus tropicalis hypothetical pr... 59 2e-07
DQ082736_2(DQ082736|pid:none) Bos taurus 5'-AMP-activated protei... 58 2e-07
(A2RB71) RecName: Full=Protein sds23; &AM270409_53(AM270409|pid... 58 2e-07
DQ082736_4(DQ082736|pid:none) Bos taurus 5'-AMP-activated protei... 58 2e-07
DQ082733_1(DQ082733|pid:none) Bos taurus 5'-AMP-activated protei... 58 3e-07
BC170164_1(BC170164|pid:none) Xenopus laevis hypothetical protei... 58 3e-07
BC059181_1(BC059181|pid:none) Danio rerio protein kinase, AMP-ac... 58 3e-07
DQ082736_3(DQ082736|pid:none) Bos taurus 5'-AMP-activated protei... 58 3e-07
BC155923_1(BC155923|pid:none) Xenopus laevis hypothetical protei... 58 3e-07
EU477214_1(EU477214|pid:none) Ovis aries 5'-AMP-activated protei... 57 4e-07
(Q91WG5) RecName: Full=5'-AMP-activated protein kinase subunit g... 57 4e-07
BC121620_1(BC121620|pid:none) Xenopus tropicalis AMP-activated p... 57 4e-07
AK154296_1(AK154296|pid:none) Mus musculus NOD-derived CD11c +ve... 57 4e-07
AK165834_1(AK165834|pid:none) Mus musculus lung RCB-0558 LLC cDN... 57 4e-07
DQ082735_1(DQ082735|pid:none) Bos taurus 5'-AMP-activated protei... 57 4e-07
DQ082734_1(DQ082734|pid:none) Bos taurus 5'-AMP-activated protei... 57 4e-07
CR380952_298(CR380952|pid:none) Candida glabrata strain CBS138 c... 57 4e-07
(A7F3V4) RecName: Full=Protein sds23; 57 4e-07
AK032238_1(AK032238|pid:none) Mus musculus adult male olfactory ... 57 4e-07
BT008166_1(BT008166|pid:none) Synthetic construct Homo sapiens p... 57 5e-07
AF087875_1(AF087875|pid:none) Homo sapiens AMP-activated protein... 57 5e-07
AB025580_1(AB025580|pid:none) Homo sapiens mRNA for H91620p, com... 57 5e-07
(Q9UGJ0) RecName: Full=5'-AMP-activated protein kinase subunit g... 57 5e-07
BC020540_1(BC020540|pid:none) Homo sapiens protein kinase, AMP-a... 57 5e-07
AY263402_1(AY263402|pid:none) Mus musculus AMP-activated protein... 57 6e-07
(Q75EC0) RecName: Full=Protein SDS23; &AE016814_342(AE016814|pi... 57 6e-07
(Q6BMN7) RecName: Full=Protein SDS23; &CR382138_166(CR382138|pi... 57 6e-07
BC043738_1(BC043738|pid:none) Xenopus laevis protein kinase, AMP... 56 1e-06
DQ133598_1(DQ133598|pid:none) Gallus gallus 5'-AMP-activated pro... 55 1e-06
DQ133597_1(DQ133597|pid:none) Gallus gallus 5'-AMP-activated pro... 55 1e-06
AP007166_360(AP007166|pid:none) Aspergillus oryzae RIB40 genomic... 55 1e-06
AK301123_1(AK301123|pid:none) Homo sapiens cDNA FLJ54740 complet... 55 1e-06
FN392319_993(FN392319|pid:none) Pichia pastoris GS115 chromosome... 55 1e-06
CU640366_529(CU640366|pid:none) Podospora anserina genomic DNA c... 55 1e-06
AM462408_2(AM462408|pid:none) Vitis vinifera contig VV78X226055.... 54 3e-06
FM178280_1(FM178280|pid:none) Carassius carassius partial mRNA f... 54 3e-06
BX842620_8(BX842620|pid:none) Neurospora crassa DNA linkage grou... 54 3e-06
AJ277480_1(AJ277480|pid:none) Kluyveromyces lactis snf4 gene. 54 4e-06
AE014297_3070(AE014297|pid:none) Drosophila melanogaster chromos... 53 7e-06
AE014297_3064(AE014297|pid:none) Drosophila melanogaster chromos... 53 7e-06
AY166753_1(AY166753|pid:none) Drosophila melanogaster loechrig i... 53 7e-06
AE014297_3071(AE014297|pid:none) Drosophila melanogaster chromos... 53 7e-06
AE014297_3066(AE014297|pid:none) Drosophila melanogaster chromos... 53 7e-06
AF094763_1(AF094763|pid:none) Drosophila melanogaster SNF4/AMP-a... 53 7e-06
AE014297_3063(AE014297|pid:none) Drosophila melanogaster chromos... 53 7e-06
AE014297_3058(AE014297|pid:none) Drosophila melanogaster chromos... 53 7e-06
CP000769_1437(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 53 9e-06
BT029655_1(BT029655|pid:none) Drosophila melanogaster IP17240 fu... 52 1e-05
(Q10343) RecName: Full=Uncharacterized protein C1556.08c; &CU32... 52 1e-05
CU928175_207(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 52 1e-05
EU952181_1(EU952181|pid:none) Zea mays clone 1217166 AKIN gamma ... 52 1e-05
AL132904_8(AL132904|pid:none) Caenorhabditis elegans YAC Y111B2A... 52 1e-05
(A6ZLF4) RecName: Full=Protein SDS24; &(P38314) RecName: Fu &S4... 52 2e-05
BT001549_1(BT001549|pid:none) Drosophila melanogaster RE11278 fu... 52 2e-05
CP001326_282(CP001326|pid:none) Micromonas sp. RCC299 chromosome... 51 3e-05
(A7TL18) RecName: Full=Protein SDS23; 51 3e-05
CP001399_852(CP001399|pid:none) Sulfolobus islandicus L.S.2.15, ... 51 3e-05
AM270326_15(AM270326|pid:none) Aspergillus niger contig An14c019... 50 4e-05
(Q6C5K4) RecName: Full=Protein SDS23; &CR382131_707(CR382131|pi... 50 6e-05
CP001331_486(CP001331|pid:none) Micromonas sp. RCC299 chromosome... 47 5e-04
AE017341_342(AE017341|pid:none) Cryptococcus neoformans var. neo... 47 5e-04
U97550_3(U97550|pid:none) Caenorhabditis elegans cosmid T20F7, c... 46 0.001
S67444(T38059;S67444) probable 5'-AMP-activated, gamma subunit f... 45 0.001
CP000477_478(CP000477|pid:none) Methanosaeta thermophila PT, com... 45 0.001
CP001337_2564(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 45 0.001
AM920436_831(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 45 0.002
CP000686_882(CP000686|pid:none) Roseiflexus sp. RS-1, complete g... 45 0.002
CP000448_2479(CP000448|pid:none) Syntrophomonas wolfei subsp. wo... 45 0.002
AE008384_1304(AE008384|pid:none) Methanosarcina mazei strain Goe... 45 0.002
CP000804_3678(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 44 0.003
BA000023_2516(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 44 0.003
(Q9UY49) RecName: Full=Inosine-5'-monophosphate dehydrogenase; ... 44 0.004
CP000583_516(CP000583|pid:none) Ostreococcus lucimarinus CCE9901... 44 0.004
BA000023_2773(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 43 0.007
CP000568_2826(CP000568|pid:none) Clostridium thermocellum ATCC 2... 43 0.009
BA000023_1957(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 43 0.009
AE017180_1998(AE017180|pid:none) Geobacter sulfurreducens PCA, c... 43 0.009
AC006761_7(AC006761|pid:none) Caenorhabditis elegans cosmid Y41G... 42 0.012
BA000023_885(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA, ... 42 0.012
(A4QRM8) RecName: Full=Protein SDS23; 42 0.012
CP000562_1562(CP000562|pid:none) Methanoculleus marisnigri JR1, ... 42 0.012
CP000941_698(CP000941|pid:none) Xylella fastidiosa M12, complete... 42 0.015
DQ212711_1(DQ212711|pid:none) Gallus gallus 5'-AMP-activated pro... 42 0.015
AE009442_605(AE009442|pid:none) Xylella fastidiosa Temecula1, co... 42 0.015
CP001404_134(CP001404|pid:none) Sulfolobus islandicus Y.N.15.51,... 42 0.020
CP000300_1627(CP000300|pid:none) Methanococcoides burtonii DSM 6... 42 0.020
AE001437_968(AE001437|pid:none) Clostridium acetobutylicum ATCC ... 42 0.020
AK118213_1(AK118213|pid:none) Arabidopsis thaliana At1g80090 mRN... 42 0.020
AE003849_1409(AE003849|pid:none) Xylella fastidiosa 9a5c, comple... 42 0.020
CP001399_2524(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 41 0.026
AP009049_2488(AP009049|pid:none) Clostridium kluyveri NBRC 12016... 41 0.026
CP000673_2745(CP000673|pid:none) Clostridium kluyveri DSM 555, c... 41 0.026
AY870332_1(AY870332|pid:none) Aedes aegypti AMPK-gamma subunit (... 41 0.026
CP001322_3831(CP001322|pid:none) Desulfatibacillum alkenivorans ... 40 0.045
CP001359_1512(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 40 0.058
CP000572_598(CP000572|pid:none) Burkholderia pseudomallei 1106a ... 40 0.076
BX571965_544(BX571965|pid:none) Burkholderia pseudomallei strain... 40 0.076
CP000570_583(CP000570|pid:none) Burkholderia pseudomallei 668 ch... 40 0.076
FM178281_1(FM178281|pid:none) Carassius carassius partial mRNA f... 40 0.076
CP000251_2421(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 40 0.076
CR855095_5(CR855095|pid:none) Oryza sativa (indica cultivar-grou... 40 0.076
CP001562_165(CP001562|pid:none) Bartonella grahamii as4aup, comp... 39 0.099
AC007591_27(AC007591|pid:none) Arabidopsis thaliana chromosome 1... 39 0.099
BT054026_1(BT054026|pid:none) Zea mays full-length cDNA clone ZM... 39 0.13
CP000562_1787(CP000562|pid:none) Methanoculleus marisnigri JR1, ... 39 0.13
BT039834_1(BT039834|pid:none) Zea mays full-length cDNA clone ZM... 39 0.13
(Q59011) RecName: Full=Inosine-5'-monophosphate dehydrogenase; ... 39 0.13
BT043117_1(BT043117|pid:none) Zea mays full-length cDNA clone ZM... 39 0.13
CP000947_1898(CP000947|pid:none) Haemophilus somnus 2336, comple... 39 0.13
BX897699_176(BX897699|pid:none) Bartonella henselae strain Houst... 39 0.13
AM429206_1(AM429206|pid:none) Vitis vinifera contig VV78X056335.... 39 0.13
CP001016_1553(CP001016|pid:none) Beijerinckia indica subsp. indi... 39 0.13
CP001185_1614(CP001185|pid:none) Thermosipho africanus TCF52B, c... 39 0.17
CP001087_2848(CP001087|pid:none) Desulfobacterium autotrophicum ... 39 0.17
CP001080_748(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP1... 39 0.17
EU967077_1(EU967077|pid:none) Zea mays clone 299326 SNF4 mRNA, c... 39 0.17
FM178279_1(FM178279|pid:none) Carassius carassius partial mRNA f... 39 0.17
AE006641_2501(AE006641|pid:none) Sulfolobus solfataricus P2, com... 39 0.17
CP000709_280(CP000709|pid:none) Brucella ovis ATCC 25840 chromos... 38 0.22
T08069(T08069) protein kinase, 48K - Chlamydomonas reinhardtii ... 38 0.29
AE008384_1302(AE008384|pid:none) Methanosarcina mazei strain Goe... 38 0.29
CP000817_4013(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 38 0.29
S41583(S41583)yhcV homolog - Methanothermus fervidus 38 0.29
AM180088_2244(AM180088|pid:none) Haloquadratum walsbyi DSM 16790... 37 0.49
EF583989_11(EF583989|pid:none) Uncultured haloarchaeon clone fos... 37 0.49
AM889285_2623(AM889285|pid:none) Gluconacetobacter diazotrophicu... 37 0.49
CP000716_1271(CP000716|pid:none) Thermosipho melanesiensis BI429... 37 0.64
AP009568_60(AP009568|pid:none) Welwitschia mirabilis chloroplast... 37 0.64
AE009439_869(AE009439|pid:none) Methanopyrus kandleri AV19, comp... 37 0.64
CP000612_1786(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 36 0.84
AF143742_1(AF143742|pid:none) Lycopersicon esculentum SNF4 (SNF4... 36 0.84
CP000909_1928(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 36 0.84
CP001357_303(CP001357|pid:none) Brachyspira hyodysenteriae WA1, ... 36 0.84
CP000655_1897(CP000655|pid:none) Polynucleobacter necessarius su... 36 0.84
CP000738_376(CP000738|pid:none) Sinorhizobium medicae WSM419, co... 36 0.84
CP000561_376(CP000561|pid:none) Pyrobaculum calidifontis JCM 115... 36 0.84
(O50316) RecName: Full=Inosine-5'-monophosphate dehydrogenase; ... 36 0.84
CP000908_2899(CP000908|pid:none) Methylobacterium extorquens PA1... 36 0.84
BA000023_2282(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 36 0.84
CP001196_2431(CP001196|pid:none) Oligotropha carboxidovorans OM5... 36 1.1
CP001389_369(CP001389|pid:none) Rhizobium sp. NGR234, complete g... 36 1.1
AP004317_23(AP004317|pid:none) Oryza sativa Japonica Group genom... 36 1.1
CP000494_643(CP000494|pid:none) Bradyrhizobium sp. BTAi1, comple... 36 1.1
CP001189_2158(CP001189|pid:none) Gluconacetobacter diazotrophicu... 36 1.1
AE017125_702(AE017125|pid:none) Helicobacter hepaticus ATCC 5144... 36 1.1
AE017224_770(AE017224|pid:none) Brucella abortus biovar 1 str. 9... 35 1.4
CP000099_943(CP000099|pid:none) Methanosarcina barkeri str. Fusa... 35 1.4
T17196(T17196) IMP dehydrogenase (EC 1.1.1.205) [similarity] - C... 35 1.4
CP001325_670(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 35 1.4
CR954203_513(CR954203|pid:none) Ostreococcus tauri strain OTTH05... 35 1.4
AP009389_801(AP009389|pid:none) Pelotomaculum thermopropionicum ... 35 1.4
AE008918_897(AE008918|pid:none) Brucella melitensis 16M chromoso... 35 1.4
CP000559_541(CP000559|pid:none) Methanocorpusculum labreanum Z, ... 35 1.9
CP000300_1599(CP000300|pid:none) Methanococcoides burtonii DSM 6... 35 1.9
CP000254_2818(CP000254|pid:none) Methanospirillum hungatei JF-1,... 35 1.9
CP001251_986(CP001251|pid:none) Dictyoglomus turgidum DSM 6724, ... 35 1.9
CP000716_773(CP000716|pid:none) Thermosipho melanesiensis BI429,... 35 2.4
AE017308_575(AE017308|pid:none) Mycoplasma mobile 163K complete ... 35 2.4
AM286690_1851(AM286690|pid:none) Alcanivorax borkumensis SK2, co... 35 2.4
CP001365_404(CP001365|pid:none) Halorubrum lacusprofundi ATCC 49... 35 2.4
CP000312_498(CP000312|pid:none) Clostridium perfringens SM101, c... 35 2.4
AE014186_269(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 35 2.4
CP000096_769(CP000096|pid:none) Pelodictyon luteolum DSM 273, co... 35 2.4
CP000816_496(CP000816|pid:none) Ignicoccus hospitalis KIN4/I, co... 35 2.4
CP001098_1225(CP001098|pid:none) Halothermothrix orenii H 168, c... 35 2.4
CP000634_638(CP000634|pid:none) Agrobacterium vitis S4 chromosom... 35 2.4
CP000246_516(CP000246|pid:none) Clostridium perfringens ATCC 131... 35 2.4
AL591688_762(AL591688|pid:none) Sinorhizobium meliloti 1021 comp... 35 2.4
F97434(F97434)IMP dehydrogenase (EC 1.1.1.205) [similarity] - Ag... 34 3.2
Z93373_1(Z93373|pid:none) Caenorhabditis elegans Cosmid C01B9, c... 34 3.2
T18800(T18800)hypothetical protein C01B9.1 - Caenorhabditis eleg... 34 3.2
CP000557_2671(CP000557|pid:none) Geobacillus thermodenitrificans... 34 3.2
CP000686_1672(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 34 3.2
CP000682_1234(CP000682|pid:none) Metallosphaera sedula DSM 5348,... 34 3.2
CU468230_1996(CU468230|pid:none) Acinetobacter baumannii str. SD... 34 3.2
CP000682_239(CP000682|pid:none) Metallosphaera sedula DSM 5348, ... 34 3.2
CP000609_112(CP000609|pid:none) Methanococcus maripaludis C5, co... 34 3.2
AB2653(AB2653) IMP dehydrogenase (EC 1.1.1.205) [similarity] - A... 34 3.2
CP000867_957(CP000867|pid:none) Methanococcus maripaludis C6, co... 34 3.2
Z93373_2(Z93373|pid:none) Caenorhabditis elegans Cosmid C01B9, c... 34 3.2
BA000023_1922(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 34 4.2
AE008384_1303(AE008384|pid:none) Methanosarcina mazei strain Goe... 34 4.2
AE010299_4529(AE010299|pid:none) Methanosarcina acetivorans str.... 34 4.2
AE017221_477(AE017221|pid:none) Thermus thermophilus HB27, compl... 34 4.2
CR378673_187(CR378673|pid:none) Photobacterium profundum SS9; se... 34 4.2
CP000499_523(CP000499|pid:none) Pichia stipitis CBS 6054 chromos... 34 4.2
AP008226_829(AP008226|pid:none) Thermus thermophilus HB8 genomic... 34 4.2
AE009439_526(AE009439|pid:none) Methanopyrus kandleri AV19, comp... 33 5.4
CP000968_520(CP000968|pid:none) Candidatus Korarchaeum cryptofil... 33 5.4
EF085319_1(EF085319|pid:none) Picea sitchensis clone WS02728_G14... 33 5.4
CP001230_1106(CP001230|pid:none) Persephonella marina EX-H1, com... 33 5.4
CP000725_1580(CP000725|pid:none) Streptococcus gordonii str. Cha... 33 5.4
CP000232_511(CP000232|pid:none) Moorella thermoacetica ATCC 3907... 33 5.4
CP000077_1123(CP000077|pid:none) Sulfolobus acidocaldarius DSM 6... 33 5.4
CP000780_1266(CP000780|pid:none) Candidatus Methanoregula boonei... 33 5.4
AE016877_618(AE016877|pid:none) Bacillus cereus ATCC 14579, comp... 33 5.4
T13345(T13345) hypothetical protein 56 - Streptococcus phage phi... 33 5.4
CP000742_1123(CP000742|pid:none) Methanococcus vannielii SB, com... 33 5.4
CP000246_227(CP000246|pid:none) Clostridium perfringens ATCC 131... 33 7.1
AE015927_271(AE015927|pid:none) Clostridium tetani E88, complete... 33 7.1
CP001080_786(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP1... 33 7.1
CP000127_963(CP000127|pid:none) Nitrosococcus oceani ATCC 19707,... 33 7.1
AE017321_523(AE017321|pid:none) Wolbachia endosymbiont strain TR... 33 7.1
CP001213_1041(CP001213|pid:none) Bifidobacterium animalis subsp.... 33 7.1
EU579524_1(EU579524|pid:none) Plasmodium berghei sporozoite and ... 33 7.1
AC146328_6(AC146328|pid:none) Oryza sativa (japonica cultivar-gr... 33 7.1
CP001515_505(CP001515|pid:none) Bifidobacterium animalis subsp. ... 33 7.1
CP000816_1087(CP000816|pid:none) Ignicoccus hospitalis KIN4/I, c... 33 7.1
AE010299_3472(AE010299|pid:none) Methanosarcina acetivorans str.... 33 7.1
CP001176_660(CP001176|pid:none) Bacillus cereus B4264, complete ... 33 7.1
CP000504_250(CP000504|pid:none) Pyrobaculum islandicum DSM 4184,... 33 7.1
CP000521_2131(CP000521|pid:none) Acinetobacter baumannii ATCC 17... 33 7.1
AE008384_475(AE008384|pid:none) Methanosarcina mazei strain Goe1... 33 7.1
CP000504_1305(CP000504|pid:none) Pyrobaculum islandicum DSM 4184... 33 7.1
BX538350_94(BX538350|pid:none) Cryptosporidium parvum chromosome... 33 9.3
CP001146_767(CP001146|pid:none) Dictyoglomus thermophilum H-6-12... 33 9.3
AE006469_335(AE006469|pid:none) Sinorhizobium meliloti 1021 plas... 33 9.3
CP001279_1070(CP001279|pid:none) Nautilia profundicola AmH, comp... 33 9.3
AL844509_211(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 33 9.3
AE000666_1206(AE000666|pid:none) Methanothermobacter thermautotr... 33 9.3
CP000852_584(CP000852|pid:none) Caldivirga maquilingensis IC-167... 33 9.3
CT573326_148(CT573326|pid:none) Pseudomonas entomophila str. L48... 33 9.3
CP001337_3282(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 33 9.3
CR940347_89(CR940347|pid:none) Theileria annulata strain Ankara ... 33 9.3
FM864216_618(FM864216|pid:none) Mycoplasma conjunctivae HRC/581T... 33 9.3
>AY054565_1(AY054565|pid:none) Arabidopsis thaliana Unknown protein
(At1g69800; T17F3.17) mRNA, complete cds.
Length = 248
Score = 87.0 bits (214), Expect = 4e-16
Identities = 62/188 (32%), Positives = 102/188 (54%), Gaps = 9/188 (4%)
Frame = +2
Query: 53 PFIPVVKGASLLEAITVMTKNQINRVPVIENNVNGEGAQIVNLITQSAILSYLG--KNIE 226
PF+PV +S+L + +++K ++ VPVI+ GE I N +TQSA++ L K +
Sbjct: 20 PFLPVSTESSMLSVMLLLSKYRLRNVPVIK---TGE-PDIKNYVTQSAVVHGLEGCKGRD 75
Query: 227 QLGKWSLKSIKDLG---FKEKKVISIDFNKRALEAFELMANNKVNGI-AVNDEKGHIIAN 394
S I DLG +VISI+ + LEAF+ M +N + G+ V I+ N
Sbjct: 76 WFDHISALPISDLGLPFMSPNEVISIESEELILEAFKRMRDNNIGGLPVVEGLNKKIVGN 135
Query: 395 ISARDLKELLNETRVFENL-YLSVGEFISKVRQ--QDYKAVNPSISCHMNDSLANIITRM 565
IS RD++ LL + VF N L+V F +K+ ++Y P+I+C + +L ++I +
Sbjct: 136 ISMRDIRYLLLQPEVFSNFRQLTVKSFATKIATAGEEYGLAIPAITCRPDSTLGSVINSL 195
Query: 566 VAANIHRV 589
+ ++HRV
Sbjct: 196 ASRSVHRV 203
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 851,713,734
Number of extensions: 15040564
Number of successful extensions: 40905
Number of sequences better than 10.0: 284
Number of HSP's gapped: 40753
Number of HSP's successfully gapped: 286
Length of query: 214
Length of database: 1,051,180,864
Length adjustment: 123
Effective length of query: 91
Effective length of database: 653,084,107
Effective search space: 59430653737
Effective search space used: 59430653737
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
2 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |