| Homology vs DNA |
 Query= Contig-U12867-1 (Contig-U12867-1Q) /CSM_Contig/Contig-U12867-1Q.Seq.d
(803 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ373042) Dictyostelium discoideum cDNA clone:ddc15a14, 3' ... 1413 0.0 1
(BJ372390) Dictyostelium discoideum cDNA clone:ddc12o09, 3' ... 1025 0.0 2
(BJ353312) Dictyostelium discoideum cDNA clone:dda49o18, 3' ... 995 0.0 2
(BJ352037) Dictyostelium discoideum cDNA clone:dda45n09, 3' ... 839 0.0 2
(BJ434444) Dictyostelium discoideum cDNA clone:ddv16j24, 3' ... 833 0.0 2
(BJ402633) Dictyostelium discoideum cDNA clone:dds17e18, 3' ... 823 0.0 2
(AU039926) Dictyostelium discoideum slug cDNA, clone SLG765. 793 0.0 2
(AC114258) Dictyostelium discoideum chromosome 2 map complem... 724 0.0 3
(BJ347724) Dictyostelium discoideum cDNA clone:dda27p23, 3' ... 722 0.0 2
(BJ344362) Dictyostelium discoideum cDNA clone:dda19c01, 3' ... 706 0.0 3
(BJ346547) Dictyostelium discoideum cDNA clone:dda24d12, 3' ... 658 0.0 3
(BJ375885) Dictyostelium discoideum cDNA clone:ddc20l12, 3' ... 521 0.0 3
(BJ431974) Dictyostelium discoideum cDNA clone:ddv17p01, 3' ... 448 0.0 2
(AU061954) Dictyostelium discoideum slug cDNA, clone SLG765. 795 0.0 1
(C83960) Dictyostelium discoideum slug cDNA, clone SLA589. 513 0.0 3
(BJ374402) Dictyostelium discoideum cDNA clone:ddc7l16, 3' e... 311 0.0 4
(BJ431998) Dictyostelium discoideum cDNA clone:ddv17d12, 3' ... 432 0.0 2
(BJ431975) Dictyostelium discoideum cDNA clone:ddv17p02, 3' ... 315 0.0 5
(AU034271) Dictyostelium discoideum slug cDNA, clone SLC428. 412 e-111 1
(BJ413885) Dictyostelium discoideum cDNA clone:ddv17d12, 5' ... 60 1e-04 1
(AE015929) Staphylococcus epidermidis ATCC 12228, complete g... 38 2e-04 17
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 38 0.095 5
(BG581404) EST483137 GVN Medicago truncatula cDNA clone pGVN... 34 0.38 2
(BG581336) EST483069 GVN Medicago truncatula cDNA clone pGVN... 34 0.38 2
(CU539052) Zebrafish DNA sequence from clone CH211-190M1 in ... 48 0.51 1
(EJ490672) 1095403534412 Global-Ocean-Sampling_GS-28-01-01-1... 48 0.51 1
(BJ396513) Dictyostelium discoideum cDNA clone:dds42o02, 5' ... 36 0.57 2
(FC799405) CBGC2910.fwd CBGC Lottia gigantea 15h 18h embryos... 36 0.71 2
(FC800919) CBGC4046.fwd CBGC Lottia gigantea 15h 18h embryos... 36 0.75 2
(FC800918) CBGC4046.rev CBGC Lottia gigantea 15h 18h embryos... 36 0.75 2
(AE014134) Drosophila melanogaster chromosome 2L, complete s... 32 0.77 2
(BJ409769) Dictyostelium discoideum cDNA clone:dds42o02, 3' ... 36 0.79 2
(AU262081) Dictyostelium discoideum vegetative cDNA clone:VS... 36 0.95 2
(C92075) Dictyostelium discoideum slug cDNA, clone SSD360. 36 0.99 2
(AU261409) Dictyostelium discoideum vegetative cDNA clone:VS... 36 1.00 2
(AC007467) Drosophila melanogaster, chromosome 2L, region 38... 32 1.1 2
(AC004759) Drosophila melanogaster DNA sequence (P1s DS04217... 32 1.1 2
(BJ357682) Dictyostelium discoideum cDNA clone:dda64j07, 3' ... 36 1.1 2
(FC789716) CBGC19879.fwd CBGC Lottia gigantea 15h 18h embryo... 36 1.1 2
(AU264757) Dictyostelium discoideum vegetative cDNA clone:VS... 36 1.1 2
(AU264745) Dictyostelium discoideum vegetative cDNA clone:VS... 36 1.1 2
(AU262450) Dictyostelium discoideum vegetative cDNA clone:VS... 36 1.2 2
(CB012782) Hc_ad_45B05_SKPL Haemonchus contortus adult from ... 36 1.2 2
(AU268994) Dictyostelium discoideum vegetative cDNA clone:VS... 36 1.2 2
(AC019718) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 32 1.2 2
(CV014942) Z01-A06X cDNA cold acclimated (CA) Rhododendron l... 36 1.2 2
(C24328) Dictyostelium discoideum gamete cDNA, clone FC-AR09. 36 1.2 2
(EA023563) Sequence 124 from patent US 7135558. 32 1.2 2
(CQ574181) Sequence 1939 from Patent WO0171042. 32 1.2 2
(BT021398) Drosophila melanogaster LD14246 full insert cDNA. 32 1.3 2
(EA023564) Sequence 125 from patent US 7135558. 32 1.3 2
(CQ574182) Sequence 1940 from Patent WO0171042. 32 1.3 2
(U11288) Drosophila melanogaster diaphanous protein (dia) mR... 32 1.3 2
(FC802925) CBGC5435.fwd CBGC Lottia gigantea 15h 18h embryos... 36 1.4 2
(AC013262) Homo sapiens BAC clone RP11-89C12 from 2, complet... 36 1.4 6
(FE240656) CAPG5956.fwd CAPG Naegleria gruberi amoeba stage ... 34 1.4 2
(FE243627) CAPG7746.fwd CAPG Naegleria gruberi amoeba stage ... 34 1.4 2
(FE231931) CAPG1480.fwd CAPG Naegleria gruberi amoeba stage ... 34 1.4 2
(FE242004) CAPG6959.fwd CAPG Naegleria gruberi amoeba stage ... 34 1.4 2
(FE236201) CAPG3767.fwd CAPG Naegleria gruberi amoeba stage ... 34 1.4 2
(FE242357) CAPG7128.fwd CAPG Naegleria gruberi amoeba stage ... 34 1.4 2
(EV161339) 0085201 Brassica napus Bud library Brassica napus... 34 1.4 3
(DU759309) ASNG2486.g2 HF200_10-06-02 uncultured marine micr... 36 1.6 2
(AB254816) Cryptomeria japonica mRNA for putative p23 co-cha... 36 1.8 2
(AC020104) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 42 2.0 4
(DQ675518) Xenopus tropicalis Shox2 mRNA, complete cds. 46 2.0 1
(CU651581) M.truncatula DNA sequence from clone MTH2-66L10 o... 46 2.0 1
(AC141799) Apis mellifera clone CH224-61C23, WORKING DRAFT S... 46 2.0 1
(AC080111) Homo sapiens chromosome 4 clone RP11-636B14 map 4... 46 2.0 1
(EK967570) 1095521012727 Global-Ocean-Sampling_GS-33-01-01-1... 46 2.0 1
(CZ936299) 255426 Tomato EcoRI BAC Library Solanum lycopersi... 46 2.0 1
(DY581750) B036-C8 Acropora millepora prawn chip library B A... 46 2.0 1
(DT042917) Mdrtp1007H15.g1 Apple_EST_Mdrtp Malus x domestica... 46 2.0 1
(DT041459) Mdrtp1004L14.g1 Apple_EST_Mdrtp Malus x domestica... 46 2.0 1
(DR894820) JGI_XZT32599.fwd NIH_XGC_tropTad5 Xenopus (Silura... 46 2.0 1
(FD454159) EGGAS69TR Haematobia irritans eggs Haematobia irr... 46 2.0 1
(EX933091) li81e08.g7 Ginkgo microsporophyll (NYBG) Ginkgo b... 46 2.0 1
(CP000789) Vibrio harveyi ATCC BAA-1116 chromosome I, comple... 46 2.0 1
(FC798418) CBGC25408.fwd CBGC Lottia gigantea 15h 18h embryo... 34 2.1 2
(FG509585) 030327KAQC001206HT (KAQC) Actinidia polygama peta... 34 3.9 2
(EY019098) CBAB2488.g1:P T. versicolor self root extracts re... 34 4.0 2
(AC080013) Homo sapiens 3 BAC RP11-379F4 (Roswell Park Cance... 38 4.2 4
(AJ272370) Oncorhynchus mykiss mRNA for type II keratin E2 (... 38 4.3 2
(EY007038) CBAI2088.g1:P T. versicolor root tip enriched SSH... 34 4.5 2
(EJ105998) 1092343137107 Global-Ocean-Sampling_GS-27-01-01-1... 36 4.9 2
(DR169511) 21_A12:A Triphysaria versicolor root-tip, early D... 34 5.1 2
(BB937986) Trifolium pratense cDNA clone:RCC11180. 34 5.1 2
(BB936564) Trifolium pratense cDNA clone:RCC09519. 34 5.2 2
(BB939258) Trifolium pratense cDNA clone:RCC12642. 34 5.3 2
(BB939123) Trifolium pratense cDNA clone:RCC12485. 34 5.3 2
(BB938265) Trifolium pratense cDNA clone:RCC11494. 34 5.3 2
(BB938089) Trifolium pratense cDNA clone:RCC11296. 34 5.3 2
(BB934672) Trifolium pratense cDNA clone:RCC07357. 34 5.3 2
(BB932065) Trifolium pratense cDNA clone:RCC03955. 34 5.3 2
(BB931979) Trifolium pratense cDNA clone:RCC03857. 34 5.3 2
(BB931915) Trifolium pratense cDNA clone:RCC03786. 34 5.3 2
(BB931298) Trifolium pratense cDNA clone:RCC03083. 34 5.3 2
(BB930420) Trifolium pratense cDNA clone:RCC02069. 34 5.3 2
(BB929296) Trifolium pratense cDNA clone:RCC00705. 34 5.3 2
(BB939117) Trifolium pratense cDNA clone:RCC12478. 34 5.3 2
>(BJ373042) Dictyostelium discoideum cDNA clone:ddc15a14, 3' end,
single read.
Length = 714
Score = 1413 bits (713), Expect = 0.0
Identities = 713/713 (100%)
Strand = Plus / Minus
Query: 91 tcattaaaagaaattgctcaaggtaaattcactcttagaagtatgcaacaacaatttcaa 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 tcattaaaagaaattgctcaaggtaaattcactcttagaagtatgcaacaacaatttcaa 655
Query: 151 caaattatgcaattaggtccaattgataaacttgtacaaatgatacctggtatgaatcaa 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 caaattatgcaattaggtccaattgataaacttgtacaaatgatacctggtatgaatcaa 595
Query: 211 ttaccacaattacaaggtaatgaaggtggtttgaaattaaaagcatatattaatatattg 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 ttaccacaattacaaggtaatgaaggtggtttgaaattaaaagcatatattaatatattg 535
Query: 271 gatagtttatcagaaaaagaattggatggaaagaaaccaatcacacaaaaacgtattatt 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gatagtttatcagaaaaagaattggatggaaagaaaccaatcacacaaaaacgtattatt 475
Query: 331 acaattgctcaaggttcaggtagacatccaaatgaggttgtagaattattggaacaacat 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 acaattgctcaaggttcaggtagacatccaaatgaggttgtagaattattggaacaacat 415
Query: 391 aaaacatttgaaaaacttattggtaaaggtggtccaggtggtggtttgggtagtttgatg 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 aaaacatttgaaaaacttattggtaaaggtggtccaggtggtggtttgggtagtttgatg 355
Query: 451 gcaggtaaaggtggtccaaagaatatggaacaagcaatgaaacaaatgaatgctaatggt 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gcaggtaaaggtggtccaaagaatatggaacaagcaatgaaacaaatgaatgctaatggt 295
Query: 511 ggtatgcagggtttaatgaattcacttaaaggtatgccaagtatgggtgaccttgccaaa 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ggtatgcagggtttaatgaattcacttaaaggtatgccaagtatgggtgaccttgccaaa 235
Query: 571 atgatgggaggtatgggtggcggcggtagaggaggtggtggtatgccaaatatgggtgac 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 atgatgggaggtatgggtggcggcggtagaggaggtggtggtatgccaaatatgggtgac 175
Query: 631 ctcgccaaaatgatgggaggcatgggaggtggtgctggtaaaggtggtcaaaatggtttc 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 ctcgccaaaatgatgggaggcatgggaggtggtgctggtaaaggtggtcaaaatggtttc 115
Query: 691 cctaatcttgacttggattaaatttaaactttaaaatacaattttgcgacctatttatca 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 cctaatcttgacttggattaaatttaaactttaaaatacaattttgcgacctatttatca 55
Query: 751 tcatattttataactctatatcctaacaacacttttataatgtataattccaa 803
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 tcatattttataactctatatcctaacaacacttttataatgtataattccaa 2
Score = 69.9 bits (35), Expect(3) = 1e-10
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 541 ggtatgccaagtatgggtgaccttgccaaaatgatgggaggtatggg 587
|||||||||| |||||||||||| ||||||||||||||||| |||||
Sbjct: 195 ggtatgccaaatatgggtgacctcgccaaaatgatgggaggcatggg 149
Score = 69.9 bits (35), Expect(3) = 1e-10
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 610 ggtatgccaaatatgggtgacctcgccaaaatgatgggaggcatggg 656
|||||||||| |||||||||||| ||||||||||||||||| |||||
Sbjct: 264 ggtatgccaagtatgggtgaccttgccaaaatgatgggaggtatggg 218
Score = 30.2 bits (15), Expect(3) = 1e-10
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 412 ggtaaaggtggtcca 426
|||||||||||||||
Sbjct: 351 ggtaaaggtggtcca 337
Score = 30.2 bits (15), Expect(3) = 1e-10
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 454 ggtaaaggtggtcca 468
|||||||||||||||
Sbjct: 393 ggtaaaggtggtcca 379
Score = 26.3 bits (13), Expect(3) = 1e-10
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 102 aattgctcaaggt 114
|||||||||||||
Sbjct: 472 aattgctcaaggt 460
Score = 26.3 bits (13), Expect(3) = 1e-10
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 333 aattgctcaaggt 345
|||||||||||||
Sbjct: 703 aattgctcaaggt 691
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 993,002,959
Number of extensions: 60973336
Number of successful extensions: 5101161
Number of sequences better than 10.0: 176
Length of query: 803
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 779
Effective length of database: 97,308,875,965
Effective search space: 75803614376735
Effective search space used: 75803614376735
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| Homology vs Protein |
Query= Contig-U12867-1 (Contig-U12867-1Q) /CSM_Contig/Contig-U12867-1Q.Seq.d
(803 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q75K18) RecName: Full=Signal recognition particle 54 kDa protei... 303 4e-81
CR954210_53(CR954210|pid:none) Ostreococcus tauri strain OTTH059... 109 1e-22
CP000590_53(CP000590|pid:none) Ostreococcus lucimarinus CCE9901 ... 105 2e-21
(P37106) RecName: Full=Signal recognition particle 54 kDa protei... 105 2e-21
AB023033_4(AB023033|pid:none) Arabidopsis thaliana genomic DNA, ... 105 2e-21
(P49969) RecName: Full=Signal recognition particle 54 kDa protei... 104 3e-21
(P49966) RecName: Full=Signal recognition particle 54 kDa protei... 103 7e-21
(P49971) RecName: Full=Signal recognition particle 54 kDa protei... 101 2e-20
GN109362_1(GN109362|pid:none) Sequence 14143 from Patent WO20090... 99 2e-19
GN109450_1(GN109450|pid:none) Sequence 14231 from Patent WO20090... 98 3e-19
GN109448_1(GN109448|pid:none) Sequence 14229 from Patent WO20090... 98 3e-19
AC147009_5(AC147009|pid:none) Medicago truncatula clone mth2-139... 97 5e-19
GN109338_1(GN109338|pid:none) Sequence 14119 from Patent WO20090... 96 1e-18
A88763(A88763) protein F21D5.7 [imported] - Caenorhabditis elega... 96 1e-18
EF147818_1(EF147818|pid:none) Populus trichocarpa clone WS0125_D... 96 1e-18
(P21565) RecName: Full=Signal recognition particle 54 kDa protei... 96 2e-18
(P49970) RecName: Full=Signal recognition particle 54 kDa protei... 96 2e-18
AK318735_1(AK318735|pid:none) Arabidopsis thaliana AT1G48900 mRN... 95 3e-18
FN392322_333(FN392322|pid:none) Pichia pastoris GS115 chromosome... 94 5e-18
CP001141_293(CP001141|pid:none) Phaeodactylum tricornutum CCAP 1... 93 9e-18
(Q0W2G1) RecName: Full=Signal recognition 54 kDa protein; AltNam... 93 9e-18
AB115419_1(AB115419|pid:none) Oryza sativa Japonica Group srp54-... 93 1e-17
CR380957_339(CR380957|pid:none) Candida glabrata strain CBS138 c... 92 2e-17
(O27376) RecName: Full=Signal recognition 54 kDa protein; AltNam... 91 3e-17
(Q5UY20) RecName: Full=Signal recognition 54 kDa protein; AltNam... 91 4e-17
CP001329_482(CP001329|pid:none) Micromonas sp. RCC299 chromosome... 91 4e-17
(Q46E01) RecName: Full=Signal recognition 54 kDa protein; AltNam... 90 7e-17
CP001398_1951(CP001398|pid:none) Thermococcus gammatolerans EJ3,... 90 1e-16
AY135212_1(AY135212|pid:none) Trypanosoma brucei signal recognit... 89 1e-16
EU686628_8(EU686628|pid:none) Uncultured marine group III euryar... 87 5e-16
(O42816) RecName: Full=Signal recognition particle 54 kDa protei... 87 6e-16
CR382124_369(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 87 6e-16
(B6YSS1) RecName: Full=Signal recognition 54 kDa protein; AltNam... 87 6e-16
(A0B638) RecName: Full=Signal recognition 54 kDa protein; AltNam... 87 8e-16
(Q99150) RecName: Full=Signal recognition particle 54 kDa protei... 86 1e-15
(Q18EV2) RecName: Full=Signal recognition 54 kDa protein; AltNam... 86 1e-15
(Q8PXF3) RecName: Full=Signal recognition 54 kDa protein; AltNam... 86 1e-15
(Q9V1E8) RecName: Full=Signal recognition 54 kDa protein; AltNam... 85 2e-15
EF583999_16(EF583999|pid:none) Uncultured haloarchaeon clone fos... 85 3e-15
AM502242_38(AM502242|pid:none) Leishmania infantum chromosome 24. 84 5e-15
BA000001_1742(BA000001|pid:none) Pyrococcus horikoshii OT3 DNA, ... 84 5e-15
GN109368_1(GN109368|pid:none) Sequence 14149 from Patent WO20090... 84 7e-15
BT078577_1(BT078577|pid:none) Lepeophtheirus salmonis Pacific fo... 84 7e-15
U42418_1(U42418|pid:none) Yarrowia lipolytica signal recognition... 83 9e-15
CT005263_70(CT005263|pid:none) Leishmania major strain Friedlin,... 83 1e-14
AM494961_75(AM494961|pid:none) Leishmania braziliensis chromosom... 83 1e-14
AE016814_227(AE016814|pid:none) Ashbya gossypii (= Eremothecium ... 83 1e-14
(O29633) RecName: Full=Signal recognition 54 kDa protein; AltNam... 82 2e-14
CU928175_716(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 82 2e-14
(Q8THD0) RecName: Full=Signal recognition 54 kDa protein; AltNam... 82 2e-14
Y12702_1(Y12702|pid:none) S.acidocaldarius ffh gene. 82 2e-14
(O07853) RecName: Full=Signal recognition 54 kDa protein; AltNam... 82 2e-14
(P70722) RecName: Full=Signal recognition 54 kDa protein; AltNam... 82 2e-14
BC061368_1(BC061368|pid:none) Xenopus tropicalis signal recognit... 82 2e-14
(Q8MZJ6) RecName: Full=Signal recognition particle 54 kDa protei... 82 3e-14
AL590444_97(AL590444|pid:none) chromosome IV of strain GB-M1 of ... 81 3e-14
CP000254_2929(CP000254|pid:none) Methanospirillum hungatei JF-1,... 81 5e-14
DQ646413_1(DQ646413|pid:none) Bombyx mori putative signal recogn... 81 5e-14
CP000867_1107(CP000867|pid:none) Methanococcus maripaludis C6, c... 81 5e-14
(P61010) RecName: Full=Signal recognition particle 54 kDa protei... 80 6e-14
(Q6AYB5) RecName: Full=Signal recognition particle 54 kDa protei... 80 6e-14
X16319_1(X16319|pid:none) Mouse mRNA for 54K subunit of signal r... 80 6e-14
AK293319_1(AK293319|pid:none) Homo sapiens cDNA FLJ54343 complet... 80 6e-14
BT044934_1(BT044934|pid:none) Salmo salar clone ssal-rgf-507-335... 80 6e-14
(Q9YB62) RecName: Full=Signal recognition 54 kDa protein; AltNam... 80 6e-14
CU928170_476(CU928170|pid:none) Kluyveromyces thermotolerans str... 80 8e-14
(P20424) RecName: Full=Signal recognition particle subunit SRP54... 79 2e-13
(A2STI3) RecName: Full=Signal recognition 54 kDa protein; AltNam... 79 2e-13
X16908_1(X16908|pid:none) Yeast SRH1 gene for Srh1p, a homologue... 79 2e-13
BT043608_1(BT043608|pid:none) Salmo salar clone HM4_3367 signal ... 79 2e-13
(B0R7X3) RecName: Full=Signal recognition 54 kDa protein; AltNam... 79 2e-13
(A2BNB5) RecName: Full=Signal recognition 54 kDa protein; AltNam... 78 3e-13
BC005543_1(BC005543|pid:none) Mus musculus signal recognition pa... 77 5e-13
(Q6LX03) RecName: Full=Signal recognition 54 kDa protein; AltNam... 77 5e-13
AK090018_1(AK090018|pid:none) Mus musculus colon RCB-0549 Cle-H3... 77 5e-13
(A4FVX4) RecName: Full=Signal recognition 54 kDa protein; AltNam... 77 7e-13
(A6VHE0) RecName: Full=Signal recognition 54 kDa protein; AltNam... 77 7e-13
(Q2NE47) RecName: Full=Signal recognition 54 kDa protein; AltNam... 77 9e-13
AY094660_1(AY094660|pid:none) Drosophila melanogaster AT23778 fu... 75 2e-12
(A6UQJ8) RecName: Full=Signal recognition 54 kDa protein; AltNam... 75 2e-12
FN357459_2(FN357459|pid:none) Schistosoma mansoni genome sequenc... 74 6e-12
(Q97ZE7) RecName: Full=Signal recognition 54 kDa protein; AltNam... 71 4e-11
CP000505_499(CP000505|pid:none) Thermofilum pendens Hrk 5, compl... 70 8e-11
AE017345_366(AE017345|pid:none) Cryptococcus neoformans var. neo... 70 1e-10
CP001403_1209(CP001403|pid:none) Sulfolobus islandicus Y.G.57.14... 69 2e-10
CP001399_1193(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 69 2e-10
CP000968_1575(CP000968|pid:none) Candidatus Korarchaeum cryptofi... 69 2e-10
(A1RS43) RecName: Full=Signal recognition 54 kDa protein; AltNam... 69 2e-10
(B1Y9L4) RecName: Full=Signal recognition 54 kDa protein; AltNam... 69 2e-10
CP000816_1038(CP000816|pid:none) Ignicoccus hospitalis KIN4/I, c... 69 2e-10
AE009442_48(AE009442|pid:none) Xylella fastidiosa Temecula1, com... 67 5e-10
AE003849_73(AE003849|pid:none) Xylella fastidiosa 9a5c, complete... 67 9e-10
AM039952_1338(AM039952|pid:none) Xanthomonas campestris pv. vesi... 65 3e-09
AE008923_1268(AE008923|pid:none) Xanthomonas axonopodis pv. citr... 65 3e-09
AC135414_19(AC135414|pid:none) Medicago truncatula clone mth2-8n... 65 3e-09
(A3MWX6) RecName: Full=Signal recognition 54 kDa protein; AltNam... 65 3e-09
AE015929_912(AE015929|pid:none) Staphylococcus epidermidis ATCC ... 64 4e-09
CP000029_786(CP000029|pid:none) Staphylococcus epidermidis RP62A... 64 4e-09
AM743169_1298(AM743169|pid:none) Stenotrophomonas maltophilia K2... 64 7e-09
(Q979Y8) RecName: Full=Signal recognition 54 kDa protein; AltNam... 64 7e-09
CP000488_550(CP000488|pid:none) Candidatus Ruthia magnifica str.... 64 7e-09
CP000251_3296(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 63 1e-08
EU016623_3(EU016623|pid:none) Uncultured marine microorganism HF... 63 1e-08
CP001359_3419(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 62 2e-08
AJ938182_1101(AJ938182|pid:none) Staphylococcus aureus RF122 com... 62 2e-08
BX571856_1187(BX571856|pid:none) Staphylococcus aureus subsp. au... 62 2e-08
CP000453_1921(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-... 62 2e-08
CP001131_3357(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 62 2e-08
AP009324_1228(AP009324|pid:none) Staphylococcus aureus subsp. au... 62 2e-08
AE013598_1301(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K... 62 2e-08
CP001184_103(CP001184|pid:none) Ureaplasma urealyticum serovar 1... 62 2e-08
AP008229_1215(AP008229|pid:none) Xanthomonas oryzae pv. oryzae M... 62 2e-08
CP000769_3332(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 62 3e-08
AP009484_823(AP009484|pid:none) Macrococcus caseolyticus JCSC540... 61 4e-08
AP009178_1505(AP009178|pid:none) Nitratiruptor sp. SB155-2 genom... 61 5e-08
AE014299_1334(AE014299|pid:none) Shewanella oneidensis MR-1, com... 60 6e-08
CP000891_1279(CP000891|pid:none) Shewanella baltica OS195, compl... 60 6e-08
CP000444_2899(CP000444|pid:none) Shewanella sp. MR-7, complete g... 60 6e-08
CP001252_3046(CP001252|pid:none) Shewanella baltica OS223, compl... 60 6e-08
CP000356_2707(CP000356|pid:none) Sphingopyxis alaskensis RB2256,... 60 6e-08
CP000446_2828(CP000446|pid:none) Shewanella sp. MR-4, complete g... 60 6e-08
CP000285_2996(CP000285|pid:none) Chromohalobacter salexigens DSM... 60 8e-08
CP000679_2075(CP000679|pid:none) Caldicellulosiruptor saccharoly... 60 8e-08
AE015927_1101(AE015927|pid:none) Clostridium tetani E88, complet... 60 1e-07
CP001102_912(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 60 1e-07
AP009247_536(AP009247|pid:none) Candidatus Vesicomyosocius okuta... 60 1e-07
CP000113_4727(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 60 1e-07
BA000043_1196(BA000043|pid:none) Geobacillus kaustophilus HTA426... 59 1e-07
CP000252_2330(CP000252|pid:none) Syntrophus aciditrophicus SB, c... 59 2e-07
CP001101_1233(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 59 2e-07
CP000813_1479(CP000813|pid:none) Bacillus pumilus SAFR-032, comp... 59 2e-07
AI1671(AI1671) signal recognition particle protein Ffh homolog f... 59 2e-07
AM942444_796(AM942444|pid:none) Corynebacterium urealyticum DSM ... 59 2e-07
AP011115_6585(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 59 2e-07
AI1299(AI1299) signal recognition particle protein Ffh homolog f... 58 3e-07
AP006716_1677(AP006716|pid:none) Staphylococcus haemolyticus JCS... 58 3e-07
CP000517_1081(CP000517|pid:none) Lactobacillus helveticus DPC 45... 58 3e-07
CP000382_1313(CP000382|pid:none) Clostridium novyi NT, complete ... 58 3e-07
CP000924_1258(CP000924|pid:none) Thermoanaerobacter pseudethanol... 58 4e-07
CP000923_1675(CP000923|pid:none) Thermoanaerobacter sp. X514, co... 58 4e-07
CP001098_723(CP001098|pid:none) Halothermothrix orenii H 168, co... 58 4e-07
CP000230_1180(CP000230|pid:none) Rhodospirillum rubrum ATCC 1117... 58 4e-07
BA000035_1963(BA000035|pid:none) Corynebacterium efficiens YS-31... 58 4e-07
CP001275_1759(CP001275|pid:none) Thermomicrobium roseum DSM 5159... 58 4e-07
CP000764_2357(CP000764|pid:none) Bacillus cereus subsp. cytotoxi... 57 5e-07
CR628336_467(CR628336|pid:none) Legionella pneumophila str. Pari... 57 5e-07
CP001124_3392(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 57 5e-07
CP000576_1472(CP000576|pid:none) Prochlorococcus marinus str. MI... 57 5e-07
CP000812_126(CP000812|pid:none) Thermotoga lettingae TMO, comple... 57 5e-07
AE016877_3655(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 57 5e-07
CP000236_456(CP000236|pid:none) Ehrlichia chaffeensis str. Arkan... 57 5e-07
AE017333_1722(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 57 5e-07
AE016879_3653(AE016879|pid:none) Bacillus anthracis str. Ames, c... 57 5e-07
CP000111_1504(CP000111|pid:none) Prochlorococcus marinus str. MI... 57 5e-07
AM295250_856(AM295250|pid:none) Staphylococcus carnosus subsp. c... 57 5e-07
CP000909_2006(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 57 5e-07
AX763776_1(AX763776|pid:none) Sequence 83 from Patent WO03040180... 57 5e-07
CP000227_3529(CP000227|pid:none) Bacillus cereus Q1, complete ge... 57 5e-07
CU466930_1522(CU466930|pid:none) Candidatus Cloacamonas acidamin... 57 7e-07
CR936503_717(CR936503|pid:none) Lactobacillus sakei strain 23K c... 57 7e-07
AC112209_22(AC112209|pid:none) Oryza sativa (japonica cultivar-g... 57 7e-07
CP000551_1481(CP000551|pid:none) Prochlorococcus marinus str. AS... 57 7e-07
GN109434_1(GN109434|pid:none) Sequence 14215 from Patent WO20090... 57 7e-07
AM494475_785(AM494475|pid:none) Orientia tsutsugamushi Boryong c... 57 9e-07
AM746676_8554(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 57 9e-07
CP001638_1005(CP001638|pid:none) Geobacillus sp. WCH70, complete... 57 9e-07
CP001229_995(CP001229|pid:none) Sulfurihydrogenibium azorense Az... 57 9e-07
CP001279_1462(CP001279|pid:none) Nautilia profundicola AmH, comp... 57 9e-07
CP001001_3567(CP001001|pid:none) Methylobacterium radiotolerans ... 57 9e-07
CP000825_1509(CP000825|pid:none) Prochlorococcus marinus str. MI... 56 1e-06
AP009179_367(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic D... 56 1e-06
AP010904_3471(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 56 1e-06
CP000577_2696(CP000577|pid:none) Rhodobacter sphaeroides ATCC 17... 56 1e-06
(P37105) RecName: Full=Signal recognition particle protein; AltN... 56 1e-06
CP000108_792(CP000108|pid:none) Chlorobium chlorochromatii CaD3,... 56 1e-06
CP001173_1071(CP001173|pid:none) Helicobacter pylori G27, comple... 56 1e-06
CP000248_1399(CP000248|pid:none) Novosphingobium aromaticivorans... 56 1e-06
CP001615_2871(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 56 1e-06
AE008691_1367(AE008691|pid:none) Thermoanaerobacter tengcongensi... 56 1e-06
AP008981_838(AP008981|pid:none) Orientia tsutsugamushi str. Iked... 56 1e-06
BA000045_2639(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 56 1e-06
CP001390_1467(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 56 2e-06
EF676559_1(EF676559|pid:none) Picea sitchensis clone WS02742_C17... 56 2e-06
AE017354_389(AE017354|pid:none) Legionella pneumophila subsp. pn... 56 2e-06
CP000675_459(CP000675|pid:none) Legionella pneumophila str. Corb... 56 2e-06
BA000016_1713(BA000016|pid:none) Clostridium perfringens str. 13... 56 2e-06
CR628337_443(CR628337|pid:none) Legionella pneumophila str. Lens... 56 2e-06
CP000961_1244(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 56 2e-06
BX548174_1473(BX548174|pid:none) Prochlorococcus marinus MED4 co... 56 2e-06
CP000509_3218(CP000509|pid:none) Nocardioides sp. JS614, complet... 56 2e-06
CP000088_659(CP000088|pid:none) Thermobifida fusca YX, complete ... 56 2e-06
CP000728_2378(CP000728|pid:none) Clostridium botulinum F str. La... 55 2e-06
CP000507_883(CP000507|pid:none) Shewanella amazonensis SB2B, com... 55 2e-06
CP000148_2840(CP000148|pid:none) Geobacter metallireducens GS-15... 55 2e-06
(P56005) RecName: Full=Signal recognition particle protein; AltN... 55 2e-06
CP000492_1470(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 55 2e-06
EU016628_22(EU016628|pid:none) Uncultured Group I marine crenarc... 55 2e-06
CP000557_1038(CP000557|pid:none) Geobacillus thermodenitrificans... 55 2e-06
AM412317_2445(AM412317|pid:none) Clostridium botulinum A str. AT... 55 2e-06
CP000866_527(CP000866|pid:none) Nitrosopumilus maritimus SCM1, c... 55 2e-06
CP001601_1583(CP001601|pid:none) Corynebacterium aurimucosum ATC... 55 2e-06
CP001080_622(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP1... 55 3e-06
CP000431_6470(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 55 3e-06
CP000264_757(CP000264|pid:none) Jannaschia sp. CCS1, complete ge... 55 3e-06
CP000095_1653(CP000095|pid:none) Prochlorococcus marinus str. NA... 55 3e-06
CP001217_1111(CP001217|pid:none) Helicobacter pylori P12, comple... 55 3e-06
CP000553_1699(CP000553|pid:none) Prochlorococcus marinus str. NA... 55 3e-06
BX842651_292(BX842651|pid:none) Bdellovibrio bacteriovorus compl... 55 3e-06
BX908798_654(BX908798|pid:none) Parachlamydia-related symbiont U... 55 3e-06
CP001339_831(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, c... 55 3e-06
CP000448_1442(CP000448|pid:none) Syntrophomonas wolfei subsp. wo... 55 3e-06
CP000362_1222(CP000362|pid:none) Roseobacter denitrificans OCh 1... 55 3e-06
AP009389_1724(AP009389|pid:none) Pelotomaculum thermopropionicum... 55 3e-06
CP000767_1252(CP000767|pid:none) Campylobacter curvus 525.92, co... 54 5e-06
CP000413_759(CP000413|pid:none) Lactobacillus gasseri ATCC 33323... 54 5e-06
CP000962_2426(CP000962|pid:none) Clostridium botulinum A3 str. L... 54 5e-06
CR767821_564(CR767821|pid:none) Ehrlichia ruminantium strain Wel... 54 5e-06
CP001078_1125(CP001078|pid:none) Clostridium botulinum E3 str. A... 54 5e-06
GN109436_1(GN109436|pid:none) Sequence 14217 from Patent WO20090... 54 5e-06
CP000058_1299(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 54 5e-06
CP000820_1132(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 54 5e-06
AM181176_4897(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 54 5e-06
AP006618_4176(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 54 6e-06
CP000686_1247(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 54 6e-06
CP000804_1620(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 54 6e-06
CP000916_1148(CP000916|pid:none) Thermotoga neapolitana DSM 4359... 54 6e-06
CP000792_1131(CP000792|pid:none) Campylobacter concisus 13826, c... 54 6e-06
BX569693_197(BX569693|pid:none) Synechococcus sp. WH8102 complet... 54 6e-06
AE017332_59(AE017332|pid:none) Mycoplasma hyopneumoniae 232, com... 54 8e-06
AC150442_3(AC150442|pid:none) Medicago truncatula chromosome 7 c... 54 8e-06
CP000661_174(CP000661|pid:none) Rhodobacter sphaeroides ATCC 170... 54 8e-06
CP000075_1280(CP000075|pid:none) Pseudomonas syringae pv. syring... 54 8e-06
CP000076_1072(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 54 8e-06
CT971583_1731(CT971583|pid:none) Synechococcus WH7803 complete g... 54 8e-06
CP001280_2909(CP001280|pid:none) Methylocella silvestris BL2, co... 54 8e-06
CP000471_499(CP000471|pid:none) Magnetococcus sp. MC-1, complete... 54 8e-06
CP001298_614(CP001298|pid:none) Methylobacterium chloromethanicu... 54 8e-06
CP000908_636(CP000908|pid:none) Methylobacterium extorquens PA1,... 54 8e-06
CP001322_4618(CP001322|pid:none) Desulfatibacillum alkenivorans ... 54 8e-06
AP009608_300(AP009608|pid:none) Mycoplasma fermentans PG18 DNA, ... 53 1e-05
CP000644_611(CP000644|pid:none) Aeromonas salmonicida subsp. sal... 53 1e-05
AE001437_1733(AE001437|pid:none) Clostridium acetobutylicum ATCC... 53 1e-05
CP000698_3699(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 53 1e-05
AP008955_3618(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 53 1e-05
CP000746_743(CP000746|pid:none) Actinobacillus succinogenes 130Z... 53 1e-05
AE000512_1538(AE000512|pid:none) Thermotoga maritima MSB8, compl... 53 1e-05
CT573213_5659(CT573213|pid:none) Frankia alni str. ACN14A chromo... 53 1e-05
CP000155_1692(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 53 1e-05
AE017226_2073(AE017226|pid:none) Treponema denticola ATCC 35405,... 53 1e-05
AE015450_288(AE015450|pid:none) Mycoplasma gallisepticum strain ... 53 1e-05
CP000716_1759(CP000716|pid:none) Thermosipho melanesiensis BI429... 53 1e-05
CP000412_1111(CP000412|pid:none) Lactobacillus delbrueckii subsp... 53 1e-05
CP000414_1481(CP000414|pid:none) Leuconostoc mesenteroides subsp... 53 1e-05
CP000411_409(CP000411|pid:none) Oenococcus oeni PSU-1, complete ... 53 1e-05
CP000157_1496(CP000157|pid:none) Erythrobacter litoralis HTCC259... 53 1e-05
AE000513_1797(AE000513|pid:none) Deinococcus radiodurans R1 chro... 53 1e-05
AE006470_1151(AE006470|pid:none) Chlorobium tepidum TLS, complet... 53 1e-05
CP001100_2442(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 53 1e-05
AE017285_836(AE017285|pid:none) Desulfovibrio vulgaris subsp. vu... 52 2e-05
CP001016_3249(CP001016|pid:none) Beijerinckia indica subsp. indi... 52 2e-05
GN109444_1(GN109444|pid:none) Sequence 14225 from Patent WO20090... 52 2e-05
CP000479_3639(CP000479|pid:none) Mycobacterium avium 104, comple... 52 2e-05
CP000422_795(CP000422|pid:none) Pediococcus pentosaceus ATCC 257... 52 2e-05
(P74214) RecName: Full=Signal recognition particle protein; AltN... 52 2e-05
CP000110_868(CP000110|pid:none) Synechococcus sp. CC9605, comple... 52 2e-05
AD3280(AD3280) signal recognition particle, chain ffh/srp54 [imp... 52 2e-05
AP007281_1088(AP007281|pid:none) Lactobacillus reuteri JCM 1112 ... 52 2e-05
AE017321_49(AE017321|pid:none) Wolbachia endosymbiont strain TRS... 52 2e-05
CP000325_1695(CP000325|pid:none) Mycobacterium ulcerans Agy99, c... 52 2e-05
CT573326_3951(CT573326|pid:none) Pseudomonas entomophila str. L4... 52 2e-05
CP000708_1614(CP000708|pid:none) Brucella ovis ATCC 25840 chromo... 52 2e-05
AE014291_1769(AE014291|pid:none) Brucella suis 1330 chromosome I... 52 3e-05
CP000776_522(CP000776|pid:none) Campylobacter hominis ATCC BAA-3... 52 3e-05
CP000975_1271(CP000975|pid:none) Methylacidiphilum infernorum V4... 52 3e-05
CP000712_4207(CP000712|pid:none) Pseudomonas putida F1, complete... 52 3e-05
BX950851_3334(BX950851|pid:none) Erwinia carotovora subsp. atros... 52 3e-05
AM889285_3092(AM889285|pid:none) Gluconacetobacter diazotrophicu... 52 3e-05
CP000462_641(CP000462|pid:none) Aeromonas hydrophila subsp. hydr... 52 3e-05
CP000926_1058(CP000926|pid:none) Pseudomonas putida GB-1, comple... 52 3e-05
CP000283_508(CP000283|pid:none) Rhodopseudomonas palustris BisB5... 52 3e-05
CP000009_188(CP000009|pid:none) Gluconobacter oxydans 621H, comp... 52 3e-05
CP000771_627(CP000771|pid:none) Fervidobacterium nodosum Rt17-B1... 52 3e-05
CP001110_1384(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 51 4e-05
AM285304_239(AM285304|pid:none) Spiroplasma citri GII3-3X chromo... 51 4e-05
AM180355_1294(AM180355|pid:none) Clostridium difficile 630 compl... 51 4e-05
CP001034_1352(CP001034|pid:none) Natranaerobius thermophilus JW/... 51 4e-05
AE005176_1616(AE005176|pid:none) Lactococcus lactis subsp. lacti... 51 4e-05
CP000388_1659(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 51 4e-05
BA000026_253(BA000026|pid:none) Mycoplasma penetrans HF-2 DNA, c... 51 4e-05
CP001037_2587(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 51 4e-05
CP000250_352(CP000250|pid:none) Rhodopseudomonas palustris HaA2,... 51 4e-05
(Q01442) RecName: Full=Signal recognition particle protein; AltN... 51 5e-05
CP001015_1169(CP001015|pid:none) Streptococcus pneumoniae G54, c... 51 5e-05
CP001096_244(CP001096|pid:none) Rhodopseudomonas palustris TIE-1... 51 5e-05
CP000381_1758(CP000381|pid:none) Neisseria meningitidis 053442, ... 51 5e-05
AM420293_5875(AM420293|pid:none) Saccharopolyspora erythraea NRR... 51 5e-05
BX571863_47(BX571863|pid:none) Photorhabdus luminescens subsp. l... 51 5e-05
CP001033_1250(CP001033|pid:none) Streptococcus pneumoniae CGSP14... 51 5e-05
CP000115_2764(CP000115|pid:none) Nitrobacter winogradskyi Nb-255... 51 5e-05
AE005672_1215(AE005672|pid:none) Streptococcus pneumoniae TIGR4,... 51 5e-05
BX293980_398(BX293980|pid:none) Mycoplasma mycoides subsp. mycoi... 51 5e-05
CP000919_1140(CP000919|pid:none) Streptococcus pneumoniae JJA, c... 51 5e-05
CP000282_1200(CP000282|pid:none) Saccharophagus degradans 2-40, ... 50 7e-05
CP000781_1453(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 50 7e-05
AL445564_61(AL445564|pid:none) Mycoplasma pulmonis (strain UAB C... 50 7e-05
CP000697_2124(CP000697|pid:none) Acidiphilium cryptum JF-5, comp... 50 7e-05
CP000094_1017(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 50 7e-05
CP000627_85(CP000627|pid:none) Vibrio cholerae O395 chromosome 2... 50 7e-05
CP000949_4132(CP000949|pid:none) Pseudomonas putida W619, comple... 50 7e-05
CP000514_2279(CP000514|pid:none) Marinobacter aquaeolei VT8, com... 50 7e-05
CP000806_3468(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 50 7e-05
AF089724_1(AF089724|pid:none) Pisum sativum signal recognition p... 50 9e-05
BX248358_160(BX248358|pid:none) Corynebacterium diphtheriae grav... 50 9e-05
CP000249_3552(CP000249|pid:none) Frankia sp. CcI3, complete geno... 50 9e-05
CP000853_1437(CP000853|pid:none) Alkaliphilus oremlandii OhILAs,... 50 9e-05
CP000359_1427(CP000359|pid:none) Deinococcus geothermalis DSM 11... 50 9e-05
AE017340_1716(AE017340|pid:none) Idiomarina loihiensis L2TR, com... 50 9e-05
CP001147_1860(CP001147|pid:none) Thermodesulfovibrio yellowstoni... 50 9e-05
BA000012_3367(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 50 9e-05
AF482013_1(AF482013|pid:none) Neisseria gonorrhoeae signal recog... 50 1e-04
CP000494_350(CP000494|pid:none) Bradyrhizobium sp. BTAi1, comple... 50 1e-04
CP000481_1559(CP000481|pid:none) Acidothermus cellulolyticus 11B... 50 1e-04
BA000031_2534(BA000031|pid:none) Vibrio parahaemolyticus RIMD 22... 50 1e-04
AE004091_3745(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 50 1e-04
FP236842_2784(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/9... 49 1e-04
CP000937_1774(CP000937|pid:none) Francisella philomiragia subsp.... 49 1e-04
AP009493_1892(AP009493|pid:none) Streptomyces griseus subsp. gri... 49 1e-04
AE016827_519(AE016827|pid:none) Mannheimia succiniciproducens MB... 49 1e-04
AE016830_1591(AE016830|pid:none) Enterococcus faecalis V583, com... 49 1e-04
AP006840_1465(AP006840|pid:none) Symbiobacterium thermophilum IA... 49 1e-04
CP000875_4601(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 49 1e-04
CP001032_2825(CP001032|pid:none) Opitutus terrae PB90-1, complet... 49 2e-04
CP001562_1674(CP001562|pid:none) Bartonella grahamii as4aup, com... 49 2e-04
BA000037_2789(BA000037|pid:none) Vibrio vulnificus YJ016 DNA, ch... 49 2e-04
CP000885_2379(CP000885|pid:none) Clostridium phytofermentans ISD... 49 2e-04
AE017180_638(AE017180|pid:none) Geobacter sulfurreducens PCA, co... 49 2e-04
CP000774_1415(CP000774|pid:none) Parvibaculum lavamentivorans DS... 49 2e-04
AL157959_1955(AL157959|pid:none) Neisseria meningitidis serogrou... 49 2e-04
CP001129_981(CP001129|pid:none) Streptococcus equi subsp. zooepi... 49 2e-04
CP000023_826(CP000023|pid:none) Streptococcus thermophilus LMG 1... 49 2e-04
CP000383_2712(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 49 2e-04
AM422018_825(AM422018|pid:none) Candidatus Phytoplasma australie... 49 2e-04
CP001146_1360(CP001146|pid:none) Dictyoglomus thermophilum H-6-1... 49 2e-04
CP000932_952(CP000932|pid:none) Campylobacter lari RM2100, compl... 49 2e-04
CP000436_1435(CP000436|pid:none) Haemophilus somnus 129PT, compl... 49 2e-04
CP000814_674(CP000814|pid:none) Campylobacter jejuni subsp. jeju... 49 2e-04
CP000387_1103(CP000387|pid:none) Streptococcus sanguinis SK36, c... 49 2e-04
CP000020_542(CP000020|pid:none) Vibrio fischeri ES114 chromosome... 48 3e-04
CP000323_1978(CP000323|pid:none) Psychrobacter cryohalolentis K5... 48 3e-04
AM233362_1238(AM233362|pid:none) Francisella tularensis subsp. h... 48 3e-04
CP001154_2469(CP001154|pid:none) Laribacter hongkongensis HLHK9,... 48 3e-04
AE016822_1195(AE016822|pid:none) Leifsonia xyli subsp. xyli str.... 48 3e-04
CP000608_704(CP000608|pid:none) Francisella tularensis subsp. tu... 48 3e-04
AM260525_2026(AM260525|pid:none) Bartonella tribocorum CIP 10547... 48 3e-04
CP001139_534(CP001139|pid:none) Vibrio fischeri MJ11 chromosome ... 48 3e-04
CP000082_1707(CP000082|pid:none) Psychrobacter arcticus 273-4, c... 48 3e-04
AE004439_1183(AE004439|pid:none) Pasteurella multocida subsp. mu... 48 4e-04
CP000633_3085(CP000633|pid:none) Agrobacterium vitis S4 chromoso... 48 4e-04
CP001341_2191(CP001341|pid:none) Arthrobacter chlorophenolicus A... 48 4e-04
AP006627_2286(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c... 48 4e-04
GN109440_1(GN109440|pid:none) Sequence 14221 from Patent WO20090... 48 4e-04
CP000025_784(CP000025|pid:none) Campylobacter jejuni RM1221, com... 48 4e-04
CP000237_520(CP000237|pid:none) Neorickettsia sennetsu strain Mi... 48 4e-04
AE006468_2602(AE006468|pid:none) Salmonella enterica subsp. ente... 48 4e-04
AE017143_1690(AE017143|pid:none) Haemophilus ducreyi strain 3500... 48 4e-04
CP000857_2692(CP000857|pid:none) Salmonella enterica subsp. ente... 48 4e-04
BA000040_481(BA000040|pid:none) Bradyrhizobium japonicum USDA 11... 48 4e-04
(Q54431) RecName: Full=Signal recognition particle protein; AltN... 48 4e-04
CP000667_1286(CP000667|pid:none) Salinispora tropica CNB-440, co... 47 6e-04
AE002098_281(AE002098|pid:none) Neisseria meningitidis MC58, com... 47 6e-04
AE007869_2629(AE007869|pid:none) Agrobacterium tumefaciens str. ... 47 6e-04
CT573071_1077(CT573071|pid:none) Kuenenia stuttgartiensis genome... 47 6e-04
FM864216_111(FM864216|pid:none) Mycoplasma conjunctivae HRC/581T... 47 6e-04
CR378673_1(CR378673|pid:none) Photobacterium profundum SS9; segm... 47 6e-04
AF092168_1(AF092168|pid:none) Arabidopsis thaliana signal recogn... 47 6e-04
AM933173_2562(AM933173|pid:none) Salmonella enterica subsp. ente... 47 6e-04
CP001157_3828(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 47 7e-04
CP000860_620(CP000860|pid:none) Candidatus Desulforudis audaxvia... 47 7e-04
CP000738_3061(CP000738|pid:none) Sinorhizobium medicae WSM419, c... 47 7e-04
CP000687_1722(CP000687|pid:none) Actinobacillus pleuropneumoniae... 47 7e-04
CR954201_80(CR954201|pid:none) Ostreococcus tauri strain OTTH059... 47 0.001
CP001321_1359(CP001321|pid:none) Haemophilus parasuis SH0165, co... 47 0.001
BX897699_1548(BX897699|pid:none) Bartonella henselae strain Hous... 47 0.001
AE004092_915(AE004092|pid:none) Streptococcus pyogenes M1 GAS, c... 47 0.001
CP000524_67(CP000524|pid:none) Bartonella bacilliformis KC583, c... 47 0.001
AJ749949_964(AJ749949|pid:none) Francisella tularensis subsp. tu... 47 0.001
CP000672_492(CP000672|pid:none) Haemophilus influenzae PittGG, c... 47 0.001
AE017263_481(AE017263|pid:none) Mesoplasma florum L1 complete ge... 46 0.001
CU928164_2797(CU928164|pid:none) Escherichia coli IAI39 chromoso... 46 0.001
AL591688_3259(AL591688|pid:none) Sinorhizobium meliloti 1021 com... 46 0.001
AP009153_2347(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 46 0.001
CP000386_1369(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 46 0.001
AP008971_525(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 46 0.001
CP000017_914(CP000017|pid:none) Streptococcus pyogenes MGAS5005,... 46 0.001
AB2050(AB2050) signal recognition particle protein [imported] - ... 46 0.001
CP000262_1064(CP000262|pid:none) Streptococcus pyogenes MGAS1075... 46 0.001
CP000266_2648(CP000266|pid:none) Shigella flexneri 5 str. 8401, ... 46 0.001
BA000034_1041(BA000034|pid:none) Streptococcus pyogenes SSI-1 DN... 46 0.001
U88582_3(U88582|pid:none) Streptococcus mutans ProX (opuABC) gen... 46 0.001
X01818_1(X01818|pid:none) E. coli trmD operon and nearby regions. 46 0.001
CP000056_885(CP000056|pid:none) Streptococcus pyogenes MGAS6180,... 46 0.001
CP000829_886(CP000829|pid:none) Streptococcus pyogenes NZ131, co... 46 0.001
CP000970_2676(CP000970|pid:none) Escherichia coli SMS-3-5, compl... 46 0.001
CP000435_741(CP000435|pid:none) Synechococcus sp. CC9311, comple... 46 0.001
CP000463_325(CP000463|pid:none) Rhodopseudomonas palustris BisA5... 46 0.001
CP000260_1029(CP000260|pid:none) Streptococcus pyogenes MGAS1027... 46 0.001
AM942759_375(AM942759|pid:none) Proteus mirabilis strain HI4320,... 46 0.001
AP007255_4062(AP007255|pid:none) Magnetospirillum magneticum AMB... 46 0.002
CP001600_3107(CP001600|pid:none) Edwardsiella ictaluri 93-146, c... 46 0.002
AP010656_579(AP010656|pid:none) Candidatus Azobacteroides pseudo... 46 0.002
CP000934_1641(CP000934|pid:none) Cellvibrio japonicus Ueda107, c... 46 0.002
AF071565_1(AF071565|pid:none) Streptomyces lividans signal recog... 46 0.002
CP001616_2757(CP001616|pid:none) Tolumonas auensis DSM 9187, com... 45 0.002
AP006628_676(AP006628|pid:none) Onion yellows phytoplasma OY-M D... 45 0.002
CP001620_1131(CP001620|pid:none) Corynebacterium kroppenstedtii ... 45 0.002
AD0400(AD0400) signal recognition particle protein [imported] - ... 45 0.003
CP000061_65(CP000061|pid:none) Aster yellows witches'-broom phyt... 45 0.003
AM286690_797(AM286690|pid:none) Alcanivorax borkumensis SK2, com... 45 0.003
CP001087_3062(CP001087|pid:none) Desulfobacterium autotrophicum ... 45 0.003
CP000671_483(CP000671|pid:none) Haemophilus influenzae PittEE, c... 45 0.003
AF238499_1(AF238499|pid:none) Chlamydomonas reinhardtii chloropl... 45 0.003
BX936398_833(BX936398|pid:none) Yersinia pseudotuberculosis IP32... 45 0.003
CP000472_3602(CP000472|pid:none) Shewanella piezotolerans WP3, c... 45 0.003
CP000724_2655(CP000724|pid:none) Alkaliphilus metalliredigens QY... 45 0.003
AP008232_545(AP008232|pid:none) Sodalis glossinidius str. 'morsi... 45 0.004
CP001348_700(CP001348|pid:none) Clostridium cellulolyticum H10, ... 45 0.004
AM236080_4544(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 45 0.004
CP000513_402(CP000513|pid:none) Dichelobacter nodosus VCS1703A, ... 44 0.005
CP001103_1674(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 44 0.005
(P44518) RecName: Full=Signal recognition particle protein; AltN... 44 0.006
FM177140_1764(FM177140|pid:none) Lactobacillus casei BL23 comple... 44 0.006
CP000259_1016(CP000259|pid:none) Streptococcus pyogenes MGAS9429... 44 0.006
AM286415_797(AM286415|pid:none) Yersinia enterocolitica subsp. e... 44 0.006
CP000140_210(CP000140|pid:none) Parabacteroides distasonis ATCC ... 44 0.008
CP000826_847(CP000826|pid:none) Serratia proteamaculans 568, com... 44 0.008
CP000360_3031(CP000360|pid:none) Acidobacteria bacterium Ellin34... 44 0.008
CP001020_1252(CP001020|pid:none) Coxiella burnetii CbuK_Q154, co... 44 0.008
EU020399_1(EU020399|pid:none) Limulus polyphemus clone Lpo25f2 p... 44 0.008
CP001074_4180(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 43 0.010
CP001191_3709(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 43 0.010
CP000133_3900(CP000133|pid:none) Rhizobium etli CFN 42, complete... 43 0.010
A72117(A72117) signal recognition particle GTPase - Chlamydophil... 43 0.010
(P47294) RecName: Full=Signal recognition particle protein; AltN... 43 0.010
CP000238_177(CP000238|pid:none) Baumannia cicadellinicola str. H... 43 0.010
AE002161_647(AE002161|pid:none) Chlamydophila pneumoniae AR39, c... 43 0.010
CP000048_666(CP000048|pid:none) Borrelia hermsii DAH, complete g... 43 0.014
EU020403_1(EU020403|pid:none) Cypridopsis vidua clone Ost25f2 pu... 43 0.014
CP001358_1781(CP001358|pid:none) Desulfovibrio desulfuricans sub... 43 0.014
FJ227541_1(FJ227541|pid:none) Lactobacillus casei strain lm41 si... 43 0.014
CP001019_1396(CP001019|pid:none) Coxiella burnetii CbuG_Q212, co... 43 0.014
AE017282_1260(AE017282|pid:none) Methylococcus capsulatus str. B... 43 0.014
EU020397_1(EU020397|pid:none) Forficula auricularia clone Fau25f... 42 0.018
CP000581_85(CP000581|pid:none) Ostreococcus lucimarinus CCE9901 ... 42 0.018
EU020406_1(EU020406|pid:none) Thulinius stephaniae clone Thul25f... 42 0.023
AE005673_3627(AE005673|pid:none) Caulobacter crescentus CB15, co... 42 0.023
EU020401_1(EU020401|pid:none) Mastigoproctus giganteus clone Mga... 42 0.031
EU020411_1(EU020411|pid:none) Prodoxus quinquepunctellus clone P... 42 0.031
EU020410_1(EU020410|pid:none) Cydia pomonella clone Cpo25f2 puta... 42 0.031
CP000450_1658(CP000450|pid:none) Nitrosomonas eutropha C91, comp... 42 0.031
CP000890_481(CP000890|pid:none) Coxiella burnetii RSA 331, compl... 42 0.031
CP000240_258(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-13... 42 0.031
AE016828_379(AE016828|pid:none) Coxiella burnetii RSA 493, compl... 42 0.031
AE014295_951(AE014295|pid:none) Bifidobacterium longum NCC2705, ... 42 0.031
EU020402_1(EU020402|pid:none) Narceus americanus clone Nam25f2 p... 42 0.031
CP001628_860(CP001628|pid:none) Micrococcus luteus NCTC 2665, co... 41 0.040
CP001281_1134(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 41 0.040
CR543861_753(CR543861|pid:none) Acinetobacter sp. ADP1 complete ... 41 0.040
CP000896_327(CP000896|pid:none) Acholeplasma laidlawii PG-8A, co... 41 0.040
AE000520_412(AE000520|pid:none) Treponema pallidum subsp. pallid... 41 0.052
CP000927_4869(CP000927|pid:none) Caulobacter sp. K31, complete g... 41 0.052
EU020398_1(EU020398|pid:none) Lithobius forticatus clone Lfo25f2... 41 0.052
(Q4UKH4) RecName: Full=Signal recognition particle protein; AltN... 40 0.068
CP000053_1106(CP000053|pid:none) Rickettsia felis URRWXCal2, com... 40 0.068
AL954747_1461(AL954747|pid:none) Nitrosomonas europaea ATCC 1971... 40 0.068
CP000976_665(CP000976|pid:none) Borrelia duttonii Ly, complete g... 40 0.089
CP000993_654(CP000993|pid:none) Borrelia recurrentis A1, complet... 40 0.089
CP000159_1592(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 40 0.089
CP000683_168(CP000683|pid:none) Rickettsia massiliae MTU5, compl... 40 0.089
(Q92J55) RecName: Full=Signal recognition particle protein; AltN... 40 0.12
(Q55311) RecName: Full=Signal sequence-binding protein; &X92071... 40 0.12
CP001612_185(CP001612|pid:none) Rickettsia africae ESF-5, comple... 40 0.12
AE017283_1428(AE017283|pid:none) Propionibacterium acnes KPA1712... 39 0.15
AE017221_674(AE017221|pid:none) Thermus thermophilus HB27, compl... 39 0.15
CP000239_1022(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, com... 39 0.20
CP001095_376(CP001095|pid:none) Bifidobacterium longum subsp. in... 39 0.20
CP000049_665(CP000049|pid:none) Borrelia turicatae 91E135, compl... 39 0.20
CP000409_190(CP000409|pid:none) Rickettsia canadensis str. McKie... 39 0.20
CP001205_660(CP001205|pid:none) Borrelia burgdorferi ZS7, comple... 39 0.26
CP000849_289(CP000849|pid:none) Rickettsia bellii OSU 85-389, co... 38 0.34
AM269894_88(AM269894|pid:none) Eimeria tenella chromosome 1, ord... 38 0.34
AP009380_1205(AP009380|pid:none) Porphyromonas gingivalis ATCC 3... 38 0.34
AE015924_967(AE015924|pid:none) Porphyromonas gingivalis W83, co... 38 0.34
CP000847_233(CP000847|pid:none) Rickettsia akari str. Hartford, ... 38 0.34
CP000090_2925(CP000090|pid:none) Ralstonia eutropha JMP134 chrom... 38 0.44
AE000783_693(AE000783|pid:none) Borrelia burgdorferi B31, comple... 38 0.44
CP000103_2118(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 38 0.44
AY812447_1(AY812447|pid:none) Schistosoma japonicum SJCHGC03486 ... 38 0.44
AP006861_353(AP006861|pid:none) Chlamydophila felis Fe/C-56 DNA,... 37 0.58
AM884176_275(AM884176|pid:none) Chlamydia trachomatis strain L2/... 37 0.58
EU020400_1(EU020400|pid:none) Mesocyclops edax clone Meso25f2 pu... 37 0.75
>(Q75K18) RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54; &AC114258_13(AC114258|pid:none)
Length = 542
Score = 303 bits (776), Expect = 4e-81
Identities = 171/256 (66%), Positives = 171/256 (66%), Gaps = 20/256 (7%)
Frame = +1
Query: 1 PSTFVSKLLGYGDMKGMLEKIKEVIPEDSTSLKEIAQGKFTLRSXXXXXXXXXXLGPIDK 180
PSTFVSKLLGYGDMKGMLEKIKEVIPEDSTSLKEIAQGKFTLRS LGPIDK
Sbjct: 287 PSTFVSKLLGYGDMKGMLEKIKEVIPEDSTSLKEIAQGKFTLRSMQQQFQQIMQLGPIDK 346
Query: 181 LVQMIPGMNQLPQLQGNEGGLKLKAYINILDSLSEKELDGKKPITQKRIITIAQGSGRHP 360
LVQMIPGMNQLPQLQGNEGGLKLKAYINILDSLSEKELDGKKPITQKRIITIAQGSGRHP
Sbjct: 347 LVQMIPGMNQLPQLQGNEGGLKLKAYINILDSLSEKELDGKKPITQKRIITIAQGSGRHP 406
Query: 361 NEVVELLEQHKTFEXXXXXXXXXXXXXXXXXXXXXPKNMEQAMKQMNANGGMQGLMNSLK 540
NEVVELLEQHKTFE PKNMEQAMKQMNANGGMQGLMNSLK
Sbjct: 407 NEVVELLEQHKTFEKLIGKGGPGGGLGSLMAGKGGPKNMEQAMKQMNANGGMQGLMNSLK 466
Query: 541 GM--------------------PSMGDLAKXXXXXXXXXXXXXXXXXXXDLXXXXXXXXX 660
GM PSMGDLAK DL
Sbjct: 467 GMGGMGDLAKMFGGGGGGGGGMPSMGDLAKMMGGMGGGGRGGGGMPNMGDLAKMMGGMGG 526
Query: 661 XXXXXXQNGFPNLDLD 708
QNGFPNLDLD
Sbjct: 527 GAGKGGQNGFPNLDLD 542
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,162,486,680
Number of extensions: 21825409
Number of successful extensions: 49278
Number of sequences better than 10.0: 513
Number of HSP's gapped: 48618
Number of HSP's successfully gapped: 520
Length of query: 267
Length of database: 1,051,180,864
Length adjustment: 126
Effective length of query: 141
Effective length of database: 643,374,430
Effective search space: 90715794630
Effective search space used: 90715794630
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
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