Contig-U01998-1
Contig ID Contig-U01998-1
Contig update 2002. 9.13
Contig sequence
>Contig-U01998-1 (Contig-U01998-1Q) /CSM_Contig/Contig-U01998-1Q.Seq.d
TAAAAAAAAAAAAAGTTTGTTTTTACTAAAAATAAAAAAAAAATATTATA
AATAAAAAAAAAAAAAATAGTTTGTAGATAGAAAAAAAATAATATAAAAT
GGATTATGTACCAAAAACCGAATTAGAAAAATTAAATGAACTTTTTTCAA
TGGGTTTTATTACAGAATGGGAATATAATAATAGAAAAAAAGATTTAGGT
GTTGATGATGATAATAATAATAATTCAATAAACAATAAAACCACCAGCAA
TGATTCTAATGATTATTATAATAATAATAATTATTCATCATCATCATATA
ATAATAATAATAATA----------TCCAATTGAATTCAGTGATCCGGAA
TTACTAAAACCTAATCATTTATTAATCCAATTCGGGTCATTCCCAATCCA
CAGAAATAGATGGAATCCCACAACTAAATTCACATCAACCTATAATTTCA
CAGGCACCACTGAATATTTTAAAGGATATAAAGGTGATCCAGTTAAAATC
GATAGAGTAAAATGTCCATACGTTATTGACAAATTTAAATCAGATTTCTC
AATACCACAATACGGTTTTACAAAATACATGGGTGTACCAAGTGAGCAAA
TCACTAATTTCTACTCACCATCAATTAGACCTGAACCATGTAAACCAATA
GTGTACCATAATGATAATAATAATAGTGAAAGAAATGCTACATGGTTAAA
ATTAAATTTTTTAATTCTTTTTAGATATCTTCAAAGTCGTGCTGTTAATG
ATGGTAGAACAGTTACCTATGGTGAACAGTTACCAAATTTGGTATCAAAA
GATAGTTCCATTGAAATTTTAGAACCATTAAAAGATTCAATTAATCAATC
AAAATGTTTAATTTGTTCTCGATCTACTCTTTCTTTTGGCAATTTCTTAT
GTAATACTCATTATTCAAAGGATTTAATGGATGCTTTTGAAAAATGTAAA
CCTTATCTATTCTTTAGATGCAAATAATGAACCAATTAAACAATTACCAA
AAGATCAATTAGAATCATTTAAAGAAAATGAAAAGAAAAAAGAAAAAACA
GTTTTCATTAAAGATAAATTCGCTTATATTGATCCTTCAAATTTACAATC
AATTTTAGATAAAAAAGTTAAACCTTATACTCAAGAAAATAATAATTATA
ATTATAATAGTAATTATGATGATTATTATTAAAAAAAAAAAATAATAAAA
AAAAATAAAAAAAAAAATATGTAAAATTATAAGAACACA

Gap gap included
Contig length 1229
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 1056012
End point 1054782
Strand (PLUS/MINUS) MINUS
Number of clones 3
Number of EST 4
Link to clone list U01998
List of clone(s)

est1=SSM342F,1,316
est2=SSI494Z,317,1033
est3=SSM342Z,630,1231
est4=SSH369Z,864,1216
Translated Amino Acid sequence
kkkkvcfy*k*kkniinkkkknsl*iekk*YKMDYVPKTELEKLNELFSMGFITEWEYNN
RKKDLGVDDDNNNNSINNKTTSNDSNDYYNNNNYSSSSYNNNNN---

---PIEFSDPELLKPNHLLIQFGSFPIHRNRWNPTTKFTSTYNFTGTTEYFKGYKGDPVK
IDRVKCPYVIDKFKSDFSIPQYGFTKYMGVPSEQITNFYSPSIRPEPCKPIVYHNDNNNS
ERNATWLKLNFLILFRYLQSRAVNDGRTVTYGEQLPNLVSKDSSIEILEPLKDSINQSKC
LICSRSTLSFGNFLCNTHYSKDLMDAFEKCKPYLFFRCK**tn*titkrsirii*rk*ke
krknsfh*r*irly*sfkftinfr*ks*tlysrk**l*l***l**lllkkknnkkk*kkk
yvkl*eh


Translated Amino Acid sequence (All Frames)
Frame A:
*kkkkfvftknkkkil*ikkkkivcr*kknnikwimyqkpn*kn*mnffqwvllqngnii
iekki*vlmmiiiiiq*tikppamilmiiiiiiiihhhhiiiiii---

---sn*iq*sgitkt*sfinpirvipnpqk*meshn*ihinl*fhrhh*if*ri*r*ss*
nr*skmsiry*qi*irflnttirfykihgctk*anh*flltin*t*tm*tnsvp******
*kkcymvkikffnsf*isskscc**w*nsylw*tvtkfgikr*fh*nfrtikrfn*sikm
fnlfsiysffwqflm*yslfkgfngcf*km*tlsil*mqimnqlnnyqkin*nhlkkmkr
kkkkqfslkinslililqiynqf*ikklnlilkkiiiiiiivimmiiikkkk**kkikkk
ickiirt

Frame B:
kkkkslfllkikkkyyk*kkkk*fvdrkkii*nglctknrirkik*tffngfyyrmgi**
*kkrfrc*******fnkq*nhqq*f**ll****lfiiii*****---

---PIEFSDPELLKPNHLLIQFGSFPIHRNRWNPTTKFTSTYNFTGTTEYFKGYKGDPVK
IDRVKCPYVIDKFKSDFSIPQYGFTKYMGVPSEQITNFYSPSIRPEPCKPIVYHNDNNNS
ERNATWLKLNFLILFRYLQSRAVNDGRTVTYGEQLPNLVSKDSSIEILEPLKDSINQSKC
LICSRSTLSFGNFLCNTHYSKDLMDAFEKCKPYLFFRCK**tn*titkrsirii*rk*ke
krknsfh*r*irly*sfkftinfr*ks*tlysrk**l*l***l**lllkkknnkkk*kkk
yvkl*eh

Frame C:
kkkkvcfy*k*kkniinkkkknsl*iekk*YKMDYVPKTELEKLNELFSMGFITEWEYNN
RKKDLGVDDDNNNNSINNKTTSNDSNDYYNNNNYSSSSYNNNNN---

---qlnsvirny*nliiy*snsghsqsteidgipqlnshqpiisqaplnilkdikviqlk
sie*nvhtlltnlnqisqyhntvlqntwvyqvskslisthhqldlnhvnq*ctimiiiiv
kemlhg*n*if*ffldifkvvllmmveqlpmvnsyqiwyqkivplkf*nh*kiqlinqnv
*fvldllfllaisyviliiqri*wmllknvnliysldannepikqlpkdqlesfkenekk
kektvfikdkfayidpsnlqsildkkvkpytqennnynynsnyddyy*kkkiikknkkkn
m*nyknt

own update 2004. 6. 9
Homology vs CSM-cDNA
Query= Contig-U01998-1 (Contig-U01998-1Q)
/CSM_Contig/Contig-U01998-1Q.Seq.d
(1239 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U01998-1 (Contig-U01998-1Q) /CSM_Contig/Conti... 1378 0.0
Contig-U14147-1 (Contig-U14147-1Q) /CSM_Contig/Conti... 46 9e-05
Contig-U12434-1 (Contig-U12434-1Q) /CSM_Contig/Conti... 46 9e-05
Contig-U11546-1 (Contig-U11546-1Q) /CSM_Contig/Conti... 46 9e-05
Contig-U08378-1 (Contig-U08378-1Q) /CSM_Contig/Conti... 46 9e-05
Contig-U12625-1 (Contig-U12625-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U11681-1 (Contig-U11681-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U11500-1 (Contig-U11500-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U11328-1 (Contig-U11328-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U10985-1 (Contig-U10985-1Q) /CSM_Contig/Conti... 44 4e-04

>Contig-U01998-1 (Contig-U01998-1Q) /CSM_Contig/Contig-U01998-1Q.Seq.d
Length = 1239

Score = 1378 bits (695), Expect = 0.0
Identities = 695/695 (100%)
Strand = Plus / Plus


Query: 326 tccaattgaattcagtgatccggaattactaaaacctaatcatttattaatccaattcgg 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tccaattgaattcagtgatccggaattactaaaacctaatcatttattaatccaattcgg 385


Query: 386 gtcattcccaatccacagaaatagatggaatcccacaactaaattcacatcaacctataa 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gtcattcccaatccacagaaatagatggaatcccacaactaaattcacatcaacctataa 445


Query: 446 tttcacaggcaccactgaatattttaaaggatataaaggtgatccagttaaaatcgatag 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tttcacaggcaccactgaatattttaaaggatataaaggtgatccagttaaaatcgatag 505


Query: 506 agtaaaatgtccatacgttattgacaaatttaaatcagatttctcaataccacaatacgg 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 agtaaaatgtccatacgttattgacaaatttaaatcagatttctcaataccacaatacgg 565


Query: 566 ttttacaaaatacatgggtgtaccaagtgagcaaatcactaatttctactcaccatcaat 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ttttacaaaatacatgggtgtaccaagtgagcaaatcactaatttctactcaccatcaat 625


Query: 626 tagacctgaaccatgtaaaccaatagtgtaccataatgataataataatagtgaaagaaa 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tagacctgaaccatgtaaaccaatagtgtaccataatgataataataatagtgaaagaaa 685


Query: 686 tgctacatggttaaaattaaattttttaattctttttagatatcttcaaagtcgtgctgt 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tgctacatggttaaaattaaattttttaattctttttagatatcttcaaagtcgtgctgt 745


Query: 746 taatgatggtagaacagttacctatggtgaacagttaccaaatttggtatcaaaagatag 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 taatgatggtagaacagttacctatggtgaacagttaccaaatttggtatcaaaagatag 805


Query: 806 ttccattgaaattttagaaccattaaaagattcaattaatcaatcaaaatgtttaatttg 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 ttccattgaaattttagaaccattaaaagattcaattaatcaatcaaaatgtttaatttg 865


Query: 866 ttctcgatctactctttcttttggcaatttcttatgtaatactcattattcaaaggattt 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 ttctcgatctactctttcttttggcaatttcttatgtaatactcattattcaaaggattt 925


Query: 926 aatggatgcttttgaaaaatgtaaaccttatctattctttagatgcaaataatgaaccaa 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 aatggatgcttttgaaaaatgtaaaccttatctattctttagatgcaaataatgaaccaa 985


Query: 986 ttaaacaattaccaaaagatcaattagaatcattt 1020
|||||||||||||||||||||||||||||||||||
Sbjct: 986 ttaaacaattaccaaaagatcaattagaatcattt 1020


Score = 311 bits (157), Expect = 1e-84
Identities = 171/178 (96%)
Strand = Plus / Plus


Query: 90 taatataaaatggattatgtaccaaaaaccgaattagaaaaattaaatgaacttttttca 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 taatataaaatggattatgtaccaaaaaccgaattagaaaaattaaatgaacttttttca 149


Query: 150 atgggttttattacagaatgggaatataataatagnnnnnnngatttaggtgttgatgat 209
||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 150 atgggttttattacagaatgggaatataataatagaaaaaaagatttaggtgttgatgat 209


Query: 210 gataataataataattcaataaacaataaaaccaccagcaatgattctaatgattatt 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gataataataataattcaataaacaataaaaccaccagcaatgattctaatgattatt 267


Score = 262 bits (132), Expect = 8e-70
Identities = 132/132 (100%)
Strand = Plus / Plus


Query: 1049 cagttttcattaaagataaattcgcttatattgatccttcaaatttacaatcaattttag 1108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1049 cagttttcattaaagataaattcgcttatattgatccttcaaatttacaatcaattttag 1108


Query: 1109 ataaaaaagttaaaccttatactcaagaaaataataattataattataatagtaattatg 1168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1109 ataaaaaagttaaaccttatactcaagaaaataataattataattataatagtaattatg 1168


Query: 1169 atgattattatt 1180
||||||||||||
Sbjct: 1169 atgattattatt 1180


Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 1218 tatgtaaaattataagaacaca 1239
||||||||||||||||||||||
Sbjct: 1218 tatgtaaaattataagaacaca 1239


Score = 30.2 bits (15), Expect = 5.4
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 211 ataataataataatt 225
|||||||||||||||
Sbjct: 268 ataataataataatt 282


Score = 30.2 bits (15), Expect = 5.4
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 208 atgataataataata 222
|||||||||||||||
Sbjct: 661 atgataataataata 675


Score = 30.2 bits (15), Expect = 5.4
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 661 atgataataataata 675
|||||||||||||||
Sbjct: 208 atgataataataata 222


>Contig-U14147-1 (Contig-U14147-1Q) /CSM_Contig/Contig-U14147-1Q.Seq.d
Length = 194

Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus


Query: 1138 aataataattataattataatagtaat 1164
|||||||||||||||||||||| ||||
Sbjct: 81 aataataattataattataataataat 107


Score = 40.1 bits (20), Expect = 0.006
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 1140 taataattataattataata 1159
||||||||||||||||||||
Sbjct: 113 taataattataattataata 132


Score = 34.2 bits (17), Expect = 0.35
Identities = 20/21 (95%)
Strand = Plus / Plus


Query: 1138 aataataattataattataat 1158
||||||||| |||||||||||
Sbjct: 75 aataataataataattataat 95


Score = 30.2 bits (15), Expect = 5.4
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 211 ataataataataatt 225
|||||||||||||||
Sbjct: 76 ataataataataatt 90


>Contig-U12434-1 (Contig-U12434-1Q) /CSM_Contig/Contig-U12434-1Q.Seq.d
Length = 1244

Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus


Query: 198 ggtgttgatgatgataataataataat 224
|||| ||||||||||||||||||||||
Sbjct: 129 ggtgatgatgatgataataataataat 155


Score = 34.2 bits (17), Expect = 0.35
Identities = 20/21 (95%)
Strand = Plus / Plus


Query: 203 tgatgatgataataataataa 223
||||||| |||||||||||||
Sbjct: 137 tgatgataataataataataa 157


Score = 30.2 bits (15), Expect = 5.4
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 661 atgataataataata 675
|||||||||||||||
Sbjct: 139 atgataataataata 153


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 48,506
Number of Sequences: 6905
Number of extensions: 48506
Number of successful extensions: 18099
Number of sequences better than 10.0: 1267
length of query: 1239
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1223
effective length of database: 5,564,391
effective search space: 6805250193
effective search space used: 6805250193
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 5.12
Homology vs DNA
Query= Contig-U01998-1 (Contig-U01998-1Q) /CSM_Contig/Contig-U01998-1Q.Seq.d
(1239 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(C90436) Dictyostelium discoideum slug cDNA, clone SSI494. 1267 0.0 2
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 1259 0.0 4
(AU039069) Dictyostelium discoideum slug cDNA, clone SSM342. 638 0.0 4
(AU038173) Dictyostelium discoideum slug cDNA, clone SSH369. 262 e-101 4
(AU074880) Dictyostelium discoideum slug cDNA, clone SSM342. 94 5e-22 3
(AC176531) Strongylocentrotus purpuratus clone R3-3075K07, W... 54 2e-06 5
(AF362368) Dictyostelium discoideum histidine kinase DhkF (d... 38 1e-05 5
(BX220880) Danio rerio genomic clone DKEY-274I12, genomic su... 54 5e-05 2
(CU929451) Zebrafish DNA sequence from clone CH73-166C6 in l... 62 5e-05 1
(AL954314) Zebrafish DNA sequence from clone XX-162M2 in lin... 62 5e-05 1
(CT316954) Sus scrofa genomic clone CH242-387E10, genomic su... 46 1e-04 2
(EB226605) PEG002-C-108922-501 Normalized Pedal-Pleural Gang... 48 1e-04 2
(CU855685) Zebrafish DNA sequence from clone CH211-172E9 in ... 42 3e-04 5
(AU272031) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 46 3e-04 2
(AU272030) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 46 3e-04 2
(EI816826) POTEA92TR Solanum tuberosum RHPOTKEY BAC ends Sol... 52 3e-04 2
(AZ213629) Sheared DNA-108B6.TF Sheared DNA Trypanosoma bruc... 42 4e-04 3
(AE014832) Plasmodium falciparum 3D7 chromosome 10 section 4... 40 5e-04 7
(CG803280) 1118040H08.x1 1118 - RescueMu Grid S Zea mays gen... 44 8e-04 2
(CR391949) Zebrafish DNA sequence from clone CH211-149B20 in... 58 8e-04 1
(DB917826) Idiosepius paradoxus cDNA, clone:Ip_aB_030_I05, 5... 46 9e-04 2
(BX240678) Danio rerio genomic clone DKEY-287A16, genomic su... 46 0.001 2
(AJ245435) Plasmodium falciparum gc-alpha gene for guanylyl ... 52 0.001 2
(AC115604) Dictyostelium discoideum chromosome 2 map 4354771... 38 0.001 6
(CZ935267) 254373 Tomato EcoRI BAC Library Solanum lycopersi... 46 0.001 2
(CG801575) 1118022F02.y1 1118 - RescueMu Grid S Zea mays gen... 44 0.001 2
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 46 0.002 5
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 38 0.002 5
(AC116551) Dictyostelium discoideum chromosome 2 map complem... 38 0.002 5
(CR376776) Zebrafish DNA sequence from clone CH211-13I23. 48 0.002 4
(CR382398) Plasmodium falciparum chromosome 6, complete sequ... 52 0.002 8
(BI208146) EST526186 cTOS Solanum lycopersicum cDNA clone cT... 46 0.002 2
(AC176040) Strongylocentrotus purpuratus clone R3-18J23, WOR... 44 0.002 6
(AC176574) Strongylocentrotus purpuratus clone R3-3077D19, W... 42 0.002 2
(EI353787) GM_WBc0104B24.f GM_WBc Glycine max genomic clone ... 54 0.003 2
(AM431834) Vitis vinifera contig VV78X106747.9, whole genome... 46 0.003 2
(BG891194) jh_11683.z1 Penaeus chinensis' cephalothorax cDNA... 44 0.003 2
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 46 0.003 5
(CU179730) Zebrafish DNA sequence from clone CH211-186I18 in... 56 0.003 1
(CT025743) Zebrafish DNA sequence from clone CH211-235A11 in... 56 0.003 1
(AC187652) Homo sapiens chromosome 7 clone WI2-2189I4, compl... 56 0.003 1
(AQ626944) CITBI-E1-2652D20.TR CITBI-E1 Homo sapiens genomic... 56 0.003 1
(AC120333) Rattus norvegicus clone CH230-335F7, WORKING DRAF... 52 0.003 2
(BI203327) EST521367 cTOS Solanum lycopersicum cDNA clone cT... 46 0.003 2
(DH123722) Oryzias latipes Fosmid clone:GOLWFno389_f13, reve... 46 0.003 2
(DX435800) BE1096_L24_R IASMA L1 HindIII BAC library Vitis v... 42 0.004 2
(FH920013) CHO_ONF032xn12f1.ab1 CHO_ONF Nicotiana tabacum ge... 54 0.004 2
(EY318165) CAWX6246.fwd CAWX Helobdella robusta Primary Earl... 46 0.004 3
(EY341509) CAWZ11203.rev CAWZ Helobdella robusta Primary Lat... 44 0.004 2
(FG290144) 1108793314521 New World Screwworm Egg 9261 ESTs C... 40 0.004 3
(BX158637) Danio rerio genomic clone DKEY-151B8, genomic sur... 50 0.004 2
(FE149510) LV_LO_RA005P16f Litopenaeus vannamei lymphoid org... 54 0.004 2
(FG288746) 1108793276233 New World Screwworm Egg 9261 ESTs C... 40 0.004 3
(FG290652) 1108793324991 New World Screwworm Egg 9261 ESTs C... 40 0.004 3
(AC112822) Rattus norvegicus clone CH230-35C18, *** SEQUENCI... 52 0.005 2
(CT559304) A BAC library has been constructed from cultivar ... 52 0.005 2
(FG282925) 1108383360962 New World Screwworm Egg 9261 ESTs C... 40 0.005 3
(BX957225) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.005 6
(ER570286) 1093015789862 Global-Ocean-Sampling_GS-36-01-01-2... 46 0.005 2
(AC115607) Dictyostelium discoideum chromosome 2 map 4559693... 48 0.005 4
(AM479898) Vitis vinifera contig VV79X008659.1, whole genome... 46 0.006 2
(CR847883) Zebrafish DNA sequence from clone DKEYP-24H10 in ... 40 0.006 3
(AC115683) Dictyostelium discoideum chromosome 2 map complem... 38 0.007 6
(BX276126) Zebrafish DNA sequence from clone CH211-232L22 in... 50 0.007 6
(DR390038) USDA-FP_149858 Adult Alate Aphis gossypii (WHAGA)... 40 0.007 2
(AC176980) Strongylocentrotus purpuratus clone R3-1103C23, W... 54 0.008 5
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 46 0.009 6
(AZ151415) SP_0031_A1_B03_SP6E Strongylocentrotus purpuratus... 42 0.009 2
(AL486740) T. brucei sheared genomic DNA clone 286a01, rever... 44 0.009 2
(M73770) P.falciparum RNA polymerase III largest subunit gen... 46 0.010 2
(FP236321) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 54 0.010 4
(AU087829) Plasmodium falciparum 3D7 cDNA clone from Sugano ... 40 0.011 2
(AF482397) Dictyostelium discoideum ABC transporter AbcG20 (... 46 0.011 4
(AL487495) T. brucei sheared genomic DNA clone 287b06, forwa... 44 0.011 2
(CT030123) Zebrafish DNA sequence from clone CH73-112A14 in ... 54 0.012 3
(ED240470) AUAC-aau39g03.b1 Ascaris suum whole genome shotgu... 42 0.012 3
(EX855865) CBNF3135.rev CBNF Phycomyces blakesleeanus NRRL15... 46 0.012 2
(ED230939) AUAC-aaj83c04.g1 Ascaris suum whole genome shotgu... 42 0.012 3
(AY159038) Dictyostelium discoideum LvsB (lvsB) gene, comple... 38 0.012 4
(EI861828) CAH1-45F11TV CAA1Ba Cicer arietinum genomic clone... 46 0.013 3
(AL981362) Danio rerio genomic clone DKEY-32E4, genomic surv... 50 0.013 2
(CW160977) 104_567_11150166_116_36507_019 Sorghum methylatio... 40 0.013 2
(AL929458) Zebrafish DNA sequence from clone CH211-248I12. 48 0.013 5
(CU905505) Zebrafish DNA sequence from clone ZFOS-405G10 in ... 54 0.013 1
(CU694476) Zebrafish DNA sequence from clone CH1073-281G2 in... 54 0.013 1
(CU570987) Zebrafish DNA sequence from clone CH73-40A2 in li... 54 0.013 1
(CU570794) Zebrafish DNA sequence from clone CH73-5K23 in li... 54 0.013 1
(CT025746) Zebrafish DNA sequence from clone DKEY-250I19 in ... 54 0.013 1
(CR936518) Zebrafish DNA sequence from clone DKEY-27E18 in l... 54 0.013 1
(CR932440) Zebrafish DNA sequence from clone CH211-247J17 in... 54 0.013 1
(CR847530) Zebrafish DNA sequence from clone DKEY-14I17 in l... 54 0.013 1
(CR627494) Zebrafish DNA sequence from clone CH211-48C9 in l... 54 0.013 1
(CR388016) Zebrafish DNA sequence from clone DKEY-106M5 in l... 54 0.013 1
(CR385066) Zebrafish DNA sequence from clone DKEY-220L23 in ... 54 0.013 1
(CR318629) Zebrafish DNA sequence from clone DKEY-30I24 in l... 54 0.013 1
(CR318608) Zebrafish DNA sequence from clone CH211-250G5 in ... 54 0.013 1
(BX957319) Zebrafish DNA sequence from clone CH211-113J14 in... 54 0.013 1
(BX908776) Zebrafish DNA sequence from clone DKEY-88E12 in l... 54 0.013 1
(BX663522) Zebrafish DNA sequence from clone CH211-261E11 in... 54 0.013 1
(BX572647) Zebrafish DNA sequence from clone CH211-149N1 in ... 54 0.013 1
(BX546488) Zebrafish DNA sequence from clone RP71-7A17 in li... 54 0.013 1
(BX510920) Zebrafish DNA sequence from clone DKEY-30J22 in l... 54 0.013 1
(BX323053) Zebrafish DNA sequence from clone DKEYP-53E9 in l... 54 0.013 1
(BX284621) Zebrafish DNA sequence from clone CH211-207N6. 54 0.013 1
(BX119991) Zebrafish DNA sequence from clone CH211-240A8 in ... 54 0.013 1
(BX119909) Zebrafish DNA sequence from clone CH211-223I3 in ... 54 0.013 1
(BX072534) Zebrafish DNA sequence from clone DKEY-16C1. 54 0.013 1
(BX004853) Zebrafish DNA sequence from clone DKEY-13O11. 54 0.013 1
(AL935291) Zebrafish DNA sequence from clone CH211-226M23 in... 54 0.013 1
(AL929341) Zebrafish DNA sequence from clone CH211-85N16. 54 0.013 1
(AL929131) Zebrafish DNA sequence from clone CH211-286O17. 54 0.013 1
(AC164085) Mus musculus BAC clone RP23-205G24 from chromosom... 54 0.013 1
(AC164084) Mus musculus BAC clone RP23-15P15 from chromosome... 54 0.013 1
(AC141484) Mus musculus BAC clone RP23-67A20 from chromosome... 54 0.013 1
(AC134841) Mus musculus BAC clone RP24-372K3 from 5, complet... 54 0.013 1
(AC134584) Mus musculus BAC clone RP23-299M6 from 5, complet... 54 0.013 1
(AC126241) Mus musculus chromosome UL clone RP24-248P10, com... 54 0.013 1
(AC123873) Mus musculus chromosome UNKNOWN clone RP23-261G21... 54 0.013 1
(CU928472) S.lycopersicum DNA sequence from clone SL_MboI-13... 54 0.013 1
(AM484560) Vitis vinifera contig VV78X144496.6, whole genome... 54 0.013 1
(AC147509) Mus musculus chromosome 7 clone RP23-14K10 map 7,... 54 0.013 1
(AC123218) Rattus norvegicus clone CH230-127K24, *** SEQUENC... 54 0.013 1
(AC098327) Rattus norvegicus clone CH230-1M9, *** SEQUENCING... 54 0.013 1
(FP236456) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 54 0.013 1
(FP067411) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 54 0.013 1
(CU915745) S.lycopersicum DNA sequence *** SEQUENCING IN PRO... 54 0.013 1
(CU611035) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 54 0.013 1
(AC094131) Rattus norvegicus clone CH230-3D12, *** SEQUENCIN... 54 0.013 1
(CT573448) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 54 0.013 1
(CT025928) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 54 0.013 1
(CR925712) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 54 0.013 1
(AC209517) Solanum tuberosum chromosome 6 clone RHPOTKEY057H... 54 0.013 1
(AC168725) Strongylocentrotus purpuratus clone R3-3010N18, W... 54 0.013 1
(AZ378765) 1M0133K11R Mouse 10kb plasmid UUGC1M library Mus ... 54 0.013 1
(DH607132) Rattus norvegicus DNA, BAC clone: RNB1-135C11, 5'... 54 0.013 1
(DH512459) Rattus norvegicus DNA, BAC clone: RNB1-006P16, 3'... 54 0.013 1
(CU826881) A BAC library has been constructed from PN40024 g... 54 0.013 1
(CE277569) tigr-gss-dog-17000333678692 Dog Library Canis lup... 54 0.013 1
(BX171086) Danio rerio genomic clone DKEY-127I18, genomic su... 54 0.013 1
(CD184241) MS1-0042T-R225-H12-U.G MS1-0042 Schistosoma manso... 54 0.013 1
(CD184240) MS1-0042T-R225-H11-U.G MS1-0042 Schistosoma manso... 54 0.013 1
(BQ457431) MAGP0002.IA Schistosoma mansoni adult, Phil LoVer... 54 0.013 1
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet... 54 0.013 1
(CP000727) Clostridium botulinum A str. Hall, complete genome. 54 0.013 1
(CP000726) Clostridium botulinum A str. ATCC 19397, complete... 54 0.013 1
(AM412317) Clostridium botulinum A str. ATCC 3502 complete g... 54 0.013 1
(BJ404885) Dictyostelium discoideum cDNA clone:dds29n19, 3' ... 42 0.014 2
(EY322386) CAWX8419.rev CAWX Helobdella robusta Primary Earl... 42 0.014 2
(AC116919) Dictyostelium discoideum chromosome 2 map complem... 40 0.014 7
(DX915006) gSpTor-846.bT7_2 Spironucleus Zap GSS Library Spi... 42 0.014 2
(BJ384484) Dictyostelium discoideum cDNA clone:ddc49j17, 3' ... 42 0.014 2
(EX811081) CBNA1798.rev CBNA Phycomyces blakesleeanus NRRL15... 46 0.014 2
(BJ386441) Dictyostelium discoideum cDNA clone:ddc58c09, 3' ... 42 0.014 2
(DX440849) BE1085_P08_R IASMA L1 HindIII BAC library Vitis v... 42 0.015 2
(CR388191) Zebrafish DNA sequence from clone DKEY-110I10 in ... 50 0.015 5
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 48 0.015 4
(EY321455) CAWX7909.rev CAWX Helobdella robusta Primary Earl... 42 0.015 2
(EY358051) CAWZ5581.rev CAWZ Helobdella robusta Primary Late... 42 0.015 2
(FM162577) Trypanosoma brucei Lister 427 surface glycoprotei... 46 0.015 2
(EY388895) CAXA7550.rev CAXA Helobdella robusta Subtracted L... 42 0.015 2
(BJ438499) Dictyostelium discoideum cDNA clone:ddv37i05, 3' ... 42 0.016 2
(CU823110) A BAC library has been constructed from PN40024 g... 42 0.016 2
(FC833010) CBHI4825.fwd CBHI Metridium senile tentacle Metri... 40 0.016 2
(AU088504) Plasmodium falciparum 3D7 cDNA clone from Sugano ... 36 0.017 3
(BJ403374) Dictyostelium discoideum cDNA clone:dds24m24, 3' ... 42 0.017 2
(CZ944804) 310106 Tomato EcoRI BAC Library Solanum lycopersi... 50 0.019 2
(AC179043) Strongylocentrotus purpuratus clone R3-4005D03, W... 48 0.019 3
(FM162578) Trypanosoma brucei Lister 427 surface glycoprotei... 42 0.019 4
(AQ942941) Sheared DNA-35G17.TR Sheared DNA Trypanosoma bruc... 36 0.021 3
(CU928117) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.021 7
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 42 0.023 5
(AC200935) Strongylocentrotus purpuratus clone R3-1024H24, W... 38 0.023 6
(AC117080) Dictyostelium discoideum chromosome 2 map complem... 46 0.024 3
(CR388064) Zebrafish DNA sequence from clone CH211-80E15 in ... 50 0.024 4
(AC171134) Helobdella robusta clone CH306-1A5, complete sequ... 36 0.026 6
(AM488370) Vitis vinifera contig VV78X106747.8, whole genome... 44 0.027 2
(CU694233) Zebrafish DNA sequence from clone CH73-208B24. 30 0.028 3
(EL503151) F09_PFLAB1-L-PLATE14B.AB1 Blood stage Plasmodium ... 36 0.030 3
(AL844501) Plasmodium falciparum strain 3D7, chromosome 1. 46 0.031 2
(CR382399) Plasmodium falciparum chromosome 6, complete sequ... 38 0.032 2
(AL954717) Zebrafish DNA sequence from clone CH211-215E6 in ... 52 0.033 8
(FE093923) LV_GL_RA47P16f Litopenaeus vannamei gills cDNA li... 42 0.034 2
(CU855766) Zebrafish DNA sequence from clone CH73-46G7 in li... 36 0.034 2
(AM428624) Vitis vinifera contig VV78X178189.4, whole genome... 42 0.034 2
(EL910256) INIT2_38_C11.g1_A006 G5 trophont cDNA (INIT2) Ich... 44 0.034 2
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 48 0.035 9
(FH064777) CHO_OF3597xj01r1.ab1 CHO_OF3 Nicotiana tabacum ge... 40 0.035 2
(DN308447) PL05016B1G08 cDNA from sexually mature hermaphodi... 40 0.036 2
(ED110149) AUAC-aat69c11.b1 Ascaris suum whole genome shotgu... 36 0.036 3
(CU104713) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 0.036 4
(BI514166) BB160014B10B08.5 Bee Brain Normalized Library, BB... 46 0.036 2
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 46 0.038 6
(AC165584) Bos taurus clone CH240-169D23, WORKING DRAFT SEQU... 44 0.038 3
(AZ157578) SP_0057_A1_C05_SP6E Strongylocentrotus purpuratus... 40 0.038 2
(DY542443) HPO-N-S01-0070-LF Hematopoietic cDNA library Pena... 42 0.038 2
(AM455739) Vitis vinifera contig VV78X227521.14, whole genom... 46 0.039 2
(BX511256) Zebrafish DNA sequence from clone DKEY-58M10 in l... 50 0.039 4
(EU094522) Amaranthus hypochondriacus clone AHAAT016 microsa... 48 0.039 2
(AU086407) Plasmodium falciparum 3D7 cDNA clone from Sugano ... 42 0.040 2
(EY640301) CAWW4810.fwd CAWW Capitella sp. I ECS-2004 Subtra... 38 0.041 3
(AZ608459) 1M0432I12R Mouse 10kb plasmid UUGC1M library Mus ... 40 0.041 2
(EL505592) H01_1659_302.AB1 Blood stage Plasmodium falciparu... 36 0.041 4
(AC180126) Strongylocentrotus purpuratus clone R3-4005M24, W... 46 0.042 5
(EY340825) CAWZ10830.fwd CAWZ Helobdella robusta Primary Lat... 38 0.043 3
(AF057019) Dictyostelium discoideum interaptin (abpD) gene, ... 40 0.044 4
(BG936921) jh_30301.z1 Penaeus chinensis' cephalothorax cDNA... 40 0.045 2
(AU037022) Dictyostelium discoideum slug cDNA, clone SSA765. 38 0.045 2
(AL747958) Danio rerio genomic clone DKEY-10A8, genomic surv... 40 0.047 2
(BI511788) BB160007A10E04.5 Bee Brain Normalized Library, BB... 46 0.047 2
(BX150788) Danio rerio genomic clone DKEY-116K15, genomic su... 46 0.047 2
(DV771976) McClintock_10_B02.ab1 Homarus EST library project... 46 0.048 2
(DW272469) UI-S-GS1-acn-l-23-0-UI.s1 UI-S-GS1 Euprymna scolo... 42 0.048 2
(DY893393) CeleSEQ12723 Cunninghamella elegans pBluescript (... 36 0.049 3
(BJ359739) Dictyostelium discoideum cDNA clone:ddc2b10, 5' e... 40 0.049 2
(AM439322) Vitis vinifera contig VV78X235390.5, whole genome... 42 0.049 2
(AM437134) Vitis vinifera contig VV78X254582.11, whole genom... 42 0.050 2
(AE014833) Plasmodium falciparum 3D7 chromosome 10 section 5... 36 0.051 9
(EI869152) CAH1-33G9TV CAA1Ba Cicer arietinum genomic clone ... 46 0.051 2
(EG417440) SAAH-aaa17b03.b1 Agen 0058 Schmidtea mediterranea... 40 0.051 2
(FF327077) 280432003 Pea aphid whole body normalized full le... 46 0.052 2
(CU914143) Zebrafish DNA sequence from clone CH211-39D24 in ... 52 0.052 1
(CT027548) Zebrafish DNA sequence from clone DKEY-173H8 in l... 52 0.052 1
(CR925781) Zebrafish DNA sequence from clone DKEY-3B23 in li... 52 0.052 1
(BX936364) Zebrafish DNA sequence from clone CH211-247G11 in... 52 0.052 1
(BX927244) Zebrafish DNA sequence from clone CH211-116O3 in ... 52 0.052 1
(BX571794) Zebrafish DNA sequence from clone DKEY-246M18 in ... 52 0.052 1
(BX537110) Zebrafish DNA sequence from clone CH211-205J18 in... 52 0.052 1
(BX511216) Zebrafish DNA sequence from clone DKEY-27F16 in l... 52 0.052 1
(BX324123) Zebrafish DNA sequence from clone DKEY-106L3 in l... 52 0.052 1
(BX323861) Zebrafish DNA sequence from clone CH211-209F23 in... 52 0.052 1
(BX322588) Zebrafish DNA sequence from clone DKEYP-55C8 in l... 52 0.052 1
(AL935049) Zebrafish DNA sequence from clone CH211-185K2 in ... 52 0.052 1
(AC166161) Mus musculus BAC clone RP23-467M7 from chromosome... 52 0.052 1
(AC165294) Mus musculus BAC clone RP23-115J11 from chromosom... 52 0.052 1
(AC163611) Mus musculus BAC clone RP23-86K21 from chromosome... 52 0.052 1
(AC147261) Mus musculus BAC clone RP24-288A1 from 5, complet... 52 0.052 1
(AC141645) Mus musculus BAC clone RP23-109K22 from chromosom... 52 0.052 1
(AC140444) Mus musculus BAC clone RP23-57N5 from chromosome ... 52 0.052 1
(AC133196) Mus musculus BAC clone RP23-173B14 from 5, comple... 52 0.052 1
(AC133095) Mus musculus BAC clone RP23-270E19 from 5, comple... 52 0.052 1
(AC130832) Mus musculus BAC clone RP24-85B14 from chromosome... 52 0.052 1
(AC126035) Mus musculus chromosome UNKNOWN clone RP24-122B7,... 52 0.052 1
(AC125382) Mus musculus BAC clone RP23-365E3 from chromosome... 52 0.052 1
(AC125197) Mus musculus BAC clone RP23-249A1 from 5, complet... 52 0.052 1
(AC125178) Mus musculus chromosome UNKNOWN clone RP23-319L16... 52 0.052 1
(AC125068) Mus musculus chromosome UNKNOWN clone RP23-432M17... 52 0.052 1
(AC124606) Mus musculus BAC clone RP23-82D2 from chromosome ... 52 0.052 1
(AC124599) Mus musculus chromosome UL clone RP23-24D13, comp... 52 0.052 1
(AC124575) Mus musculus BAC clone RP23-162F11 from chromosom... 52 0.052 1
(AC124237) Mus musculus chromosome 17, clone RP23-281A8, com... 52 0.052 1
(AM488721) Vitis vinifera contig VV78X188388.20, whole genom... 52 0.052 1
(AE014841) Plasmodium falciparum 3D7 chromosome 11 section 6... 52 0.052 1
(AL512663) Human DNA sequence from clone RP11-356H7 on chrom... 52 0.052 1
(AC023992) Homo sapiens chromosome 17, clone RP11-247I5, com... 52 0.052 1
(AC006376) Homo sapiens BAC clone RP11-386L3 from Y, complet... 52 0.052 1
(AC004687) Homo sapiens chromosome 17, clone RP5-1171I10, co... 52 0.052 1
(AC126446) Mus musculus chromosome UNK clone RP23-326H22, WO... 52 0.052 1
(AC118169) Rattus norvegicus clone CH230-404J17, *** SEQUENC... 52 0.052 1
(AC115646) Rattus norvegicus clone CH230-290I1, *** SEQUENCI... 52 0.052 1
(FP016231) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.052 1
(CU655884) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.052 1
(AC068438) Homo sapiens chromosome 17 clone RP11-110F1 map 1... 52 0.052 1
(AC027520) Homo sapiens chromosome 1 clone RP11-301D3 map 1,... 52 0.052 1
(CT027839) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.052 1
(CT027725) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.052 1
(CR854885) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.052 1
(CR388059) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.052 1
(AL844509) Plasmodium falciparum chromosome 13. 52 0.052 1
(AL844506) Plasmodium falciparum chromosome 7. 52 0.052 1
(AC233053) Solanum tuberosum chromosome 6 clone RHPOTKEY063H... 52 0.052 1
(AC166363) Mus musculus chromosome UNKNOWN clone RP23-195C13... 52 0.052 1
(AC010911) Homo sapiens clone 6_M_12, LOW-PASS SEQUENCE SAMP... 52 0.052 1
(AZ372945) 1M0125G06F Mouse 10kb plasmid UUGC1M library Mus ... 52 0.052 1
(FI239708) CccaBb031-N1JR CccABb Cajanus cajan genomic clone... 52 0.052 1
(ER863672) PPTB168TF Solanum tuberosum RHPOTKEY BAC ends Sol... 52 0.052 1
(AG894347) Oryza sativa Indica Group genomic DNA, BAC end se... 52 0.052 1
(BX178244) Danio rerio genomic clone DKEY-185I24, genomic su... 52 0.052 1
(BX136598) Danio rerio genomic clone DKEY-98K22, genomic sur... 52 0.052 1
(DY736106) EST_ssal_rgb2_91845 ssalrgb2 mixed_tissue Salmo s... 52 0.052 1
(DR025804) Osmo00866 F. cylindrus osmotic stress library Fra... 52 0.052 1
(CN586299) USDA-FP_129371 Acyrthosiphon pisum, Pea Aphid Acy... 52 0.052 1
(BB728931) Mus musculus 8 cells embryo 8 cells cDNA, RIKEN f... 52 0.052 1
(EY367096) CAXA11077.rev CAXA Helobdella robusta Subtracted ... 52 0.052 1
(EX616972) 255397788 Pea aphid whole body normalized full le... 52 0.052 1
(EX613225) 255383468 Pea aphid whole body normalized full le... 52 0.052 1
(FI365192) CH321-70G05.x CHORI-321 Drosophila melanogaster g... 38 0.053 2
(FF321564) 280414917 Pea aphid whole body normalized full le... 46 0.053 2
(BX163099) Danio rerio genomic clone DKEY-169M10, genomic su... 48 0.054 2
(EX612557) 255379775 Pea aphid whole body normalized full le... 46 0.055 2
(CR626875) Zebrafish DNA sequence from clone DKEY-31J4 in li... 50 0.055 5
(BJ338487) Dictyostelium discoideum cDNA clone:dda61p14, 5' ... 46 0.055 2
(AC005139) Plasmodium falciparum chromosome 12, *** SEQUENCI... 46 0.055 9
(EX618290) 255400900 Pea aphid whole body normalized full le... 46 0.056 2
(EX641589) 256637927 Pea aphid whole body normalized full le... 46 0.056 2
(FF306286) 279364598 Pea aphid whole body normalized full le... 46 0.057 2
(BX950201) Zebrafish DNA sequence from clone CH211-101L11 in... 46 0.057 4
(AC178129) Strongylocentrotus purpuratus clone R3-1117C11, W... 44 0.057 7
(EX649192) 256729036 Pea aphid whole body normalized full le... 46 0.058 2
(EG412106) SAAH-aaa87h06.b1 Agen 0058 Schmidtea mediterranea... 40 0.058 2
(FF312608) 279386020 Pea aphid whole body normalized full le... 46 0.058 2
(FH402974) CHO_OF4826xo15f1.ab1 CHO_OF4 Nicotiana tabacum ge... 38 0.058 2
(EX617254) 255399557 Pea aphid whole body normalized full le... 46 0.060 2
(FF331583) 280447300 Pea aphid whole body normalized full le... 46 0.060 2
(CG006045) ZUAEH69TH ZM_3.0_4.0_KB Zea mays genomic clone ZM... 50 0.061 2
(FE122165) LV_HC_RA075P01r Litopenaeus vannamei hemocyte cDN... 38 0.061 2
(FH403052) CHO_OF4826xo15r1.ab1 CHO_OF4 Nicotiana tabacum ge... 38 0.061 2
(AM478748) Vitis vinifera contig VV78X080079.5, whole genome... 42 0.062 2
(GO066873) PmTwI08A05.scf PmTwI Penaeus monodon cDNA 3', mRN... 38 0.062 2
(AZ157710) SP_0058_A1_B05_SP6E Strongylocentrotus purpuratus... 40 0.063 2
(FE121779) LV_HC_RA074E04r Litopenaeus vannamei hemocyte cDN... 38 0.063 2
(FH474117) CHO_OF4989xi03f1.ab1 CHO_OF4 Nicotiana tabacum ge... 48 0.065 2
(EY319508) CAWX6920.fwd CAWX Helobdella robusta Primary Earl... 44 0.067 2
(EY304912) CAWX18948.fwd CAWX Helobdella robusta Primary Ear... 44 0.069 2
(EL595597) ED423 P. monodon hemocyte library Penaeus monodon... 38 0.069 3
(AL008970) Plasmodium falciparum MAL3P4. 38 0.069 10
(AZ202314) SP_0056_A2_F09_SP6E Strongylocentrotus purpuratus... 44 0.070 2
(DW405262) ES-N-S03-0068-W Penaeus monodon Eyestalk cDNA lib... 38 0.071 2
(DY885485) CeleSEQ752 Cunninghamella elegans pBluescript (Ec... 38 0.071 2
(EI896474) VUH1-83D20TV VUUBBa (VUH1) Vigna unguiculata geno... 40 0.071 2
(BX569779) Zebrafish DNA sequence from clone CH211-113I9 in ... 40 0.071 4
(CK420178) AUF_IpTrk_25_o14 Trunk kidney cDNA library Ictalu... 48 0.072 2
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 40 0.072 4
(AZ157728) SP_0058_A1_C05_SP6E Strongylocentrotus purpuratus... 40 0.073 2
(BD140494) Elongation factor-2 kinase (EF-2 kinase) and meth... 38 0.074 3
(AR193041) Sequence 7 from patent US 6346406. 38 0.074 3
(U90946) Dictyostelium discoideum myosin heavy chain kinase ... 38 0.074 3
(AC192533) Ornithorhynchus anatinus clone OA_Bb-80J8, WORKIN... 46 0.075 4
(DU013595) 295947 Tomato MboI BAC Library Solanum lycopersic... 46 0.076 2
(AM478561) Vitis vinifera contig VV78X112409.2, whole genome... 50 0.076 2
(CU467868) Zebrafish DNA sequence from clone CH73-334N2 in l... 50 0.078 2
(CG807191) 1118078G09.y1 1118 - RescueMu Grid S Zea mays gen... 38 0.078 2
(CU694369) Zebrafish DNA sequence from clone CH73-25P10 in l... 46 0.083 2
(BX005081) Zebrafish DNA sequence from clone CH211-69M16 in ... 46 0.083 5
(CT737172) Zebrafish DNA sequence from clone DKEY-284O11 in ... 42 0.085 5
(AC177604) Strongylocentrotus purpuratus clone R3-1023L14, W... 44 0.085 6
(AE014834) Plasmodium falciparum 3D7 chromosome 10 section 6... 46 0.086 11
(AL929358) Plasmodium falciparum strain 3D7, chromosome 9; s... 36 0.088 11
(M59474) Plasmodium falciparum asparagine-rich antigen Pfa35... 38 0.089 3
(EH382891) EST00092 G. natalis leg muscle expression library... 38 0.091 2
(FM992689) Candida dubliniensis CD36 chromosome 2, complete ... 36 0.091 12
(BJ434143) Dictyostelium discoideum cDNA clone:ddv16c03, 3' ... 40 0.094 3
(DW405295) ES-N-S03-0119-W Penaeus monodon Eyestalk cDNA lib... 38 0.095 2
(BX914207) Zebrafish DNA sequence from clone DKEY-158P11 in ... 46 0.096 2
(AM444659) Vitis vinifera contig VV78X043451.11, whole genom... 42 0.10 3
(EH383020) EST00375 G. natalis leg muscle expression library... 38 0.10 2
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 38 0.10 5
(CP001182) Acinetobacter baumannii AB0057, complete genome. 34 0.10 2
(AY160093) Dictyostelium discoideum nucleotide exchange fact... 40 0.10 3
(CU459141) Acinetobacter baumannii str. AYE, complete genome. 34 0.10 2
(CP000863) Acinetobacter baumannii ACICU, complete genome. 34 0.10 2
(CP001172) Acinetobacter baumannii AB307-0294, complete genome. 34 0.10 2
(DX397203) GE__Sa0092E01.b1 Gossypium exiguum WGS library Go... 44 0.11 2
(FE116441) LV_HC_RA064P13f Litopenaeus vannamei hemocyte cDN... 38 0.11 2
(DW405518) ES-N-S03-0540-W Penaeus monodon Eyestalk cDNA lib... 38 0.11 2
(DV773681) McClintock46_E02.ab1 Homarus EST library project ... 38 0.11 3
(AC201292) Strongylocentrotus purpuratus clone R3-16G23, WOR... 38 0.11 5
(EY440917) CBAY4445.fwd CBAY Tubifex tubifex Embryos and juv... 46 0.12 2
(EH383477) EST01294 G. natalis leg muscle expression library... 38 0.12 2
(CR847960) Zebrafish DNA sequence from clone DKEY-30E1 in li... 36 0.12 2
(CR855265) Zebrafish DNA sequence from clone CH211-195E6 in ... 46 0.12 2
(AC176509) Strongylocentrotus purpuratus clone R3-3072O16, W... 46 0.12 5
(EY292014) CAWX10321.rev CAWX Helobdella robusta Primary Ear... 36 0.12 3
(FP236471) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.12 2
(DH307326) Oryzias latipes Fosmid clone:GOLWFno659_g16, forw... 38 0.12 2
(AC176992) Strongylocentrotus purpuratus clone R3-36P6, WORK... 40 0.13 9
(AC173556) Strongylocentrotus purpuratus clone R3-3002C13, W... 40 0.13 3
(CR385086) Zebrafish DNA sequence from clone DKEY-223G14 in ... 40 0.13 5
(CG803197) 1118039H04.y1 1118 - RescueMu Grid S Zea mays gen... 46 0.13 2
(CG803196) 1118039H04.1EL_x1 1118 - RescueMu Grid S Zea mays... 46 0.13 2
(CU633615) Zebrafish DNA sequence from clone CH1073-120P15 i... 36 0.13 2
(DW677858) HC-H-S01-0209-LF heat-induced haemocyte cDNA libr... 36 0.13 3
(AF193620) AF193620 Plasmodium falciparum 7G8 Plasmodium fal... 46 0.14 2
(AM478115) Vitis vinifera contig VV78X115679.5, whole genome... 50 0.14 2
(CU768662) A BAC library has been constructed from PN40024 g... 38 0.14 2
(EU146118) Cryptosporidium hominis isolate 10963 47 kDa prot... 42 0.14 2
(CG807194) 1118078H01.y1 1118 - RescueMu Grid S Zea mays gen... 46 0.14 2
(AM440473) Vitis vinifera contig VV78X157770.9, whole genome... 42 0.14 2
(AM440839) Vitis vinifera contig VV78X199190.7, whole genome... 40 0.15 2
(FE712064) FCMI-PM-307 WSSV infected Penaeus monodon cDNA li... 42 0.15 2
(CR383683) Zebrafish DNA sequence from clone DKEY-114C3 in l... 50 0.15 4
(GH707388) Ap-BrOvp-VI-F6 Ap-BrOvp Acyrthosiphon pisum cDNA ... 38 0.15 2
(FE148589) LV_LO_RA004O07f Litopenaeus vannamei lymphoid org... 38 0.15 2
(CU797285) A BAC library has been constructed from PN40024 g... 42 0.16 2
(DH344803) Oryzias latipes Fosmid clone:GOLWFno716_m13, forw... 38 0.16 2
(FE191468) LV_NC_RA55G12r Litopenaeus vannamei nerve cord cD... 38 0.16 2
(AC179824) Strongylocentrotus purpuratus clone R3-1012N7, WO... 44 0.16 3
(FH450403) CHO_OF4717xf11f1.ab1 CHO_OF4 Nicotiana tabacum ge... 38 0.16 2
(FG586244) TpNBL014871 Trichinella pseudospiralis new born l... 38 0.16 3
(CU651632) Zebrafish DNA sequence from clone CH1073-312B22 i... 48 0.16 2
(EG346776) SAAH-aaa71c11.b1 Agen 0058 Schmidtea mediterranea... 46 0.17 2
(AY068933) Schmidtea mediterranea clone H.27.11b unknown mRN... 38 0.17 2
(BX566813) Glossina morsitans morsitans (Tseatse fly) EST fr... 46 0.17 2
(AC213540) Populus trichocarpa clone POP053-A08, complete se... 36 0.17 6
(FE055055) LV_ES_RA22B19f Litopenaeus vannamei eyestalk cDNA... 42 0.17 2
(BG937026) jh_50243.b1 Penaeus chinensis' cephalothorax cDNA... 40 0.17 2
(AZ154683) SP_0015_B1_G06_SP6E Strongylocentrotus purpuratus... 38 0.17 2
(EE674340) EST1449 Mycelia Grown in Nitrogen Limited Media C... 40 0.17 2
(BU496549) PfESToab51f08.y1 Plasmodium falciparum 3D7 asexua... 38 0.17 2
(BG902343) jh_15791.z1 Penaeus chinensis' cephalothorax cDNA... 40 0.17 2
(BQ739554) PfESToab47d08.y1 Plasmodium falciparum 3D7 asexua... 38 0.17 2
(GH549439) FCMI-PM-1200 WSSV infected Penaeus monodon cDNA l... 38 0.17 2
(ED335668) AUAC-aaz63b09.b1 Ascaris suum whole genome shotgu... 42 0.17 2
(AQ656664) Sheared DNA-2H15.TF Sheared DNA Trypanosoma bruce... 42 0.17 2
(EU094513) Amaranthus hypochondriacus clone AHAAT005 microsa... 38 0.17 2
(FE045128) LV_ES_RA04C21r Litopenaeus vannamei eyestalk cDNA... 42 0.17 2
(BI815168) PfESToaa15c07.y1 Plasmodium falciparum 3D7 asexua... 44 0.18 2
(BJ396799) Dictyostelium discoideum cDNA clone:dds44b03, 5' ... 46 0.18 2
(AY531391) Schizaphis graminum mitochondrion, complete genome. 36 0.18 6
(AL749101) Danio rerio genomic clone DKEY-4J6, genomic surve... 38 0.18 2
(FE174609) LV_NC_RA09E22f Litopenaeus vannamei nerve cord cD... 38 0.18 2
(ER861573) PPTE209TF Solanum tuberosum RHPOTKEY BAC ends Sol... 46 0.19 2
(EY345787) CAWZ14271.rev CAWZ Helobdella robusta Primary Lat... 38 0.19 2
(AQ003751) CpG0372A CpIOWAgDNA1 Cryptosporidium parvum genom... 44 0.19 2
(AL929379) Zebrafish DNA sequence from clone CH211-156H6. 46 0.19 4
(AC168769) Strongylocentrotus purpuratus clone R3-13O22, WOR... 48 0.19 3
(FG587754) TpNBL016381 Trichinella pseudospiralis new born l... 38 0.19 3
(CR149231) Reverse strand read from insert in 5'HPRT inserti... 44 0.19 2
(AF300533) Diadasia chilensis cytochrome oxidase subunit I g... 36 0.20 3
(U96323) Mimus polyglottos clone 24 microsatellite sequence. 46 0.20 2
(FP101877) Zebrafish DNA sequence from clone CH1073-41D10 in... 36 0.20 3
(CX559476) ydb23h06.y2 Sea urchin EST Lib1 Strongylocentrotu... 38 0.20 2
(FI429131) CH322-160N09.x CHORI-322 Drosophila melanogaster ... 44 0.20 2
(EB192221) PEG001-C-004534-501 Non-Normalized Pedal-Pleural ... 38 0.20 2
(BH615873) BMBAC305A05SP6_PSU Brugia malayi Genomic Bac Libr... 46 0.20 2
(EY299631) CAWX14573.rev CAWX Helobdella robusta Primary Ear... 38 0.20 2
(EG414990) SAAH-aab27f08.b1 Agen 0058 Schmidtea mediterranea... 38 0.20 2
(EY357379) CAWZ4865.rev CAWZ Helobdella robusta Primary Late... 38 0.20 2
(ED121932) AUAC-aae30c09.g1 Ascaris suum whole genome shotgu... 38 0.20 2
(EG416313) SAAH-aab47d03.b1 Agen 0058 Schmidtea mediterranea... 46 0.20 2
(FG288720) 1108793274846 New World Screwworm Egg 9261 ESTs C... 36 0.20 3
(G42731) B5M5 Plasmodium falciparum haploid Plasmodium falci... 36 0.20 2
(EG412874) SAAH-aaa07f08.b1 Agen 0058 Schmidtea mediterranea... 38 0.20 2
(EG415342) SAAH-aab35f08.b1 Agen 0058 Schmidtea mediterranea... 46 0.20 2
(BX211144) Danio rerio genomic clone DKEY-264I15, genomic su... 38 0.20 2
(EG410848) SAAH-aaa65e03.b1 Agen 0058 Schmidtea mediterranea... 38 0.20 2
(EY294947) CAWX11976.rev CAWX Helobdella robusta Primary Ear... 38 0.21 2
(BZ967134) PUCBV61TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 38 0.21 2
(CU693474) Zebrafish DNA sequence from clone CH1073-323J21 i... 50 0.21 1
(CU302223) Zebrafish DNA sequence from clone CH73-58A17 in l... 50 0.21 1
(CU137647) Zebrafish DNA sequence from clone DKEY-201C1 in l... 50 0.21 1
(CU019653) Zebrafish DNA sequence from clone DKEY-190N15 in ... 50 0.21 1
(CT998559) Zebrafish DNA sequence from clone DKEY-192J13 in ... 50 0.21 1
(CT737197) Zebrafish DNA sequence from clone DKEYP-94F8 in l... 50 0.21 1
(CT476811) Zebrafish DNA sequence from clone CH211-188C11 in... 50 0.21 1
(CT030207) Zebrafish DNA sequence from clone CH211-176G6 in ... 50 0.21 1
(CR932058) Zebrafish DNA sequence from clone DKEY-22M14 in l... 50 0.21 1
(CR855861) Zebrafish DNA sequence from clone DKEY-208C22 in ... 50 0.21 1
(CR855273) Zebrafish DNA sequence from clone DKEYP-34E1 in l... 50 0.21 1
(CR848802) Zebrafish DNA sequence from clone DKEY-15J19 in l... 50 0.21 1
(CR848661) Zebrafish DNA sequence from clone CH211-187B9 in ... 50 0.21 1
(CR788237) Zebrafish DNA sequence from clone DKEY-75L11 in l... 50 0.21 1
(CR524825) Zebrafish DNA sequence from clone CH211-15N24 in ... 50 0.21 1
(CR405711) Zebrafish DNA sequence from clone DKEY-166C18 in ... 50 0.21 1
(CR388083) Zebrafish DNA sequence from clone DKEY-181J1 in l... 50 0.21 1
(CR388057) Zebrafish DNA sequence from clone DKEYP-28G3 in l... 50 0.21 1
(CR361552) Zebrafish DNA sequence from clone CH211-239J15 in... 50 0.21 1
(BX936464) Zebrafish DNA sequence from clone DKEY-246O4 in l... 50 0.21 1
(BX936331) Zebrafish DNA sequence from clone CH211-1C10 in l... 50 0.21 1
(BX914206) Zebrafish DNA sequence from clone CH211-174J14 in... 50 0.21 1
(BX901909) Zebrafish DNA sequence from clone CH211-42I14 in ... 50 0.21 1
(BX649488) Zebrafish DNA sequence from clone DKEY-21O6 in li... 50 0.21 1
(BX649312) Zebrafish DNA sequence from clone DKEY-170M15 in ... 50 0.21 1
(BX649258) Zebrafish DNA sequence from clone CH211-203F4 in ... 50 0.21 1
(BX571899) Zebrafish DNA sequence from clone DKEY-256I3 in l... 50 0.21 1
(BX571720) Zebrafish DNA sequence from clone DKEY-77G5 in li... 50 0.21 1
(BX569789) Zebrafish DNA sequence from clone DKEY-68O6 in li... 50 0.21 1
(BX470131) Zebrafish DNA sequence from clone CH211-175M2 in ... 50 0.21 1
(BX470087) Zebrafish DNA sequence from clone CH211-202A10 in... 50 0.21 1
(BX470073) Zebrafish DNA sequence from clone DKEY-239D21 in ... 50 0.21 1
(BX004865) Zebrafish DNA sequence from clone CH211-204E13. 50 0.21 1
(AL954181) Zebrafish DNA sequence from clone CH211-216B1. 50 0.21 1
(AL844512) Zebrafish DNA sequence from clone DKEY-8M7 in lin... 50 0.21 1
(AL805947) Zebrafish DNA sequence from clone CH211-212P13. 50 0.21 1
(AL591676) Zebrafish DNA sequence from clone BUSM1-259M24 in... 50 0.21 1
(EU001252) Glyptapanteles indiensis bracovirus segment 23, c... 50 0.21 1
(BV498848) S217P60164RD9.T0 Noemie Pan troglodytes troglodyt... 50 0.21 1
(AC160531) Mus musculus chromosome 3, clone RP24-374F22, com... 50 0.21 1
(AC154254) Mus musculus BAC clone RP24-201L14 from chromosom... 50 0.21 1
(AC151730) Mus musculus BAC clone RP24-84E18 from chromosome... 50 0.21 1
(AC129014) Mus musculus BAC clone RP24-317F20 from chromosom... 50 0.21 1
(AC117728) Mus musculus chromosome 6, clone RP24-126C21, com... 50 0.21 1
(AY955840) Paracoccidioides brasiliensis strain Pb18 mitocho... 50 0.21 1
(AM440557) Vitis vinifera, whole genome shotgun sequence, co... 50 0.21 1
(AM435841) Vitis vinifera contig VV78X112273.14, whole genom... 50 0.21 1
(EF710652) Glyptapanteles indiensis clone BAC 1H21, complete... 50 0.21 1
(AE014840) Plasmodium falciparum 3D7 chromosome 11 section 5... 50 0.21 1
(AE014819) Plasmodium falciparum 3D7 chromosome 14 section 4... 50 0.21 1
(BX546468) Human DNA sequence from clone RP5-1111N9 on chrom... 50 0.21 1
(AL022574) Human DNA sequence from clone RP5-1111N9 on chrom... 50 0.21 1
(AC140134) Homo sapiens chromosome 5 clone RP11-1319K7, comp... 50 0.21 1
(AC139778) Homo sapiens chromosome 5 clone RP11-1012N14, com... 50 0.21 1
(AC138866) Homo sapiens chromosome 5 clone RP11-1415C14, com... 50 0.21 1
(AC136619) Homo sapiens chromosome 16 clone RP11-467M13, com... 50 0.21 1
(AC136431) Homo sapiens chromosome 16 clone RP11-148M17, com... 50 0.21 1
(AC132801) Homo sapiens chromosome 5 clone CTC-202O15, compl... 50 0.21 1
(AC104027) Homo sapiens chromosome 8, clone RP11-451O18, com... 50 0.21 1
(AC104005) Homo sapiens chromosome 8, clone RP11-158M23, com... 50 0.21 1
(AC027275) Homo sapiens chromosome 16 clone CTD-2059I8, comp... 50 0.21 1
(AC021856) Homo sapiens BAC clone RP11-553E5 from 4, complet... 50 0.21 1
(AC141253) Homo sapiens chromosome 16 clone RP11-1269O3, WOR... 50 0.21 1

>(C90436) Dictyostelium discoideum slug cDNA, clone SSI494.
Length = 717

Score = 1267 bits (639), Expect(2) = 0.0
Identities = 639/639 (100%)
Strand = Plus / Plus


Query: 326 tccaattgaattcagtgatccggaattactaaaacctaatcatttattaatccaattcgg 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tccaattgaattcagtgatccggaattactaaaacctaatcatttattaatccaattcgg 60


Query: 386 gtcattcccaatccacagaaatagatggaatcccacaactaaattcacatcaacctataa 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtcattcccaatccacagaaatagatggaatcccacaactaaattcacatcaacctataa 120


Query: 446 tttcacaggcaccactgaatattttaaaggatataaaggtgatccagttaaaatcgatag 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttcacaggcaccactgaatattttaaaggatataaaggtgatccagttaaaatcgatag 180


Query: 506 agtaaaatgtccatacgttattgacaaatttaaatcagatttctcaataccacaatacgg 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agtaaaatgtccatacgttattgacaaatttaaatcagatttctcaataccacaatacgg 240


Query: 566 ttttacaaaatacatgggtgtaccaagtgagcaaatcactaatttctactcaccatcaat 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttttacaaaatacatgggtgtaccaagtgagcaaatcactaatttctactcaccatcaat 300


Query: 626 tagacctgaaccatgtaaaccaatagtgtaccataatgataataataatagtgaaagaaa 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tagacctgaaccatgtaaaccaatagtgtaccataatgataataataatagtgaaagaaa 360


Query: 686 tgctacatggttaaaattaaattttttaattctttttagatatcttcaaagtcgtgctgt 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgctacatggttaaaattaaattttttaattctttttagatatcttcaaagtcgtgctgt 420


Query: 746 taatgatggtagaacagttacctatggtgaacagttaccaaatttggtatcaaaagatag 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taatgatggtagaacagttacctatggtgaacagttaccaaatttggtatcaaaagatag 480


Query: 806 ttccattgaaattttagaaccattaaaagattcaattaatcaatcaaaatgtttaatttg 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttccattgaaattttagaaccattaaaagattcaattaatcaatcaaaatgtttaatttg 540


Query: 866 ttctcgatctactctttcttttggcaatttcttatgtaatactcattattcaaaggattt 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttctcgatctactctttcttttggcaatttcttatgtaatactcattattcaaaggattt 600


Query: 926 aatggatgcttttgaaaaatgtaaaccttatctattctt 964
|||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aatggatgcttttgaaaaatgtaaaccttatctattctt 639

Score = 113 bits (57), Expect(2) = 0.0
Identities = 57/57 (100%)
Strand = Plus / Plus


Query: 964 ttagatgcaaataatgaaccaattaaacaattaccaaaagatcaattagaatcattt 1020
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ttagatgcaaataatgaaccaattaaacaattaccaaaagatcaattagaatcattt 694

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,285,720,661
Number of extensions: 86169562
Number of successful extensions: 9638367
Number of sequences better than 10.0: 2802
Length of query: 1239
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 1215
Effective length of database: 99,340,224,878
Effective search space: 120698373226770
Effective search space used: 120698373226770
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.18
Homology vs Protein
Query= Contig-U01998-1 (Contig-U01998-1Q) /CSM_Contig/Contig-U01998-1Q.Seq.d
(1239 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC115599_3(AC115599|pid:none) Dictyostelium discoideum chromosom... 449 e-147
AK150945_1(AK150945|pid:none) Mus musculus bone marrow macrophag... 34 9.5
AK151316_1(AK151316|pid:none) Mus musculus bone marrow macrophag... 34 9.5
AK151573_1(AK151573|pid:none) Mus musculus bone marrow macrophag... 34 9.5
CP001074_832(CP001074|pid:none) Rhizobium etli CIAT 652, complet... 34 9.5
BC055836_1(BC055836|pid:none) Mus musculus neutrophil cytosolic ... 34 9.5
CP000880_2850(CP000880|pid:none) Salmonella enterica subsp. ariz... 34 9.5
(Q09014) RecName: Full=Neutrophil cytosol factor 1; Sho... 34 9.5
AF267747_1(AF267747|pid:none) Mus musculus p47-phox gene, comple... 34 9.5
I54525(I54525) leukemia-related protein - mouse (fragment) &L11... 34 9.5

>AC115599_3(AC115599|pid:none) Dictyostelium discoideum chromosome 2
map 4229098-4354721 strain AX4, complete sequence.
Length = 620

Score = 449 bits (1154), Expect(2) = e-147
Identities = 212/212 (100%), Positives = 212/212 (100%)
Frame = +3

Query: 327 PIEFSDPELLKPNHLLIQFGSFPIHRNRWNPTTKFTSTYNFTGTTEYFKGYKGDPVKIDR 506
PIEFSDPELLKPNHLLIQFGSFPIHRNRWNPTTKFTSTYNFTGTTEYFKGYKGDPVKIDR
Sbjct: 337 PIEFSDPELLKPNHLLIQFGSFPIHRNRWNPTTKFTSTYNFTGTTEYFKGYKGDPVKIDR 396

Query: 507 VKCPYVIDKFKSDFSIPQYGFTKYMGVPSEQITNFYSPSIRPEPCKPIVYHNDNNNSERN 686
VKCPYVIDKFKSDFSIPQYGFTKYMGVPSEQITNFYSPSIRPEPCKPIVYHNDNNNSERN
Sbjct: 397 VKCPYVIDKFKSDFSIPQYGFTKYMGVPSEQITNFYSPSIRPEPCKPIVYHNDNNNSERN 456

Query: 687 ATWLKLNFLILFRYLQSRAVNDGRTVTYGEQLPNLVSKDSSIEILEPLKDSINQSKCLIC 866
ATWLKLNFLILFRYLQSRAVNDGRTVTYGEQLPNLVSKDSSIEILEPLKDSINQSKCLIC
Sbjct: 457 ATWLKLNFLILFRYLQSRAVNDGRTVTYGEQLPNLVSKDSSIEILEPLKDSINQSKCLIC 516

Query: 867 SRSTLSFGNFLCNTHYSKDLMDAFEKCKPYLF 962
SRSTLSFGNFLCNTHYSKDLMDAFEKCKPYLF
Sbjct: 517 SRSTLSFGNFLCNTHYSKDLMDAFEKCKPYLF 548

Score = 98.2 bits (243), Expect(2) = e-147
Identities = 49/58 (84%), Positives = 49/58 (84%)
Frame = +1

Query: 964 LDANNEPIKQLPKDQLESFXXXXXXXXXTVFIKDKFAYIDPSNLQSILDKKVKPYTQE 1137
LDANNEPIKQLPKDQLESF TVFIKDKFAYIDPSNLQSILDKKVKPYTQE
Sbjct: 549 LDANNEPIKQLPKDQLESFKENEKKKEKTVFIKDKFAYIDPSNLQSILDKKVKPYTQE 606

Score = 43.5 bits (101), Expect = 0.016
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +3

Query: 150 MGFITEWEYNNRKKDLGV 203
MGFITEWEYNNRKKDLGV
Sbjct: 1 MGFITEWEYNNRKKDLGV 18

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,377,959,443
Number of extensions: 24260741
Number of successful extensions: 64182
Number of sequences better than 10.0: 10
Number of HSP's gapped: 64162
Number of HSP's successfully gapped: 12
Length of query: 413
Length of database: 1,051,180,864
Length adjustment: 131
Effective length of query: 282
Effective length of database: 627,191,635
Effective search space: 176868041070
Effective search space used: 176868041070
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.57 gvh: 0.19 alm: 0.47 top: 0.53 tms: 0.00 mit: 0.21 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: nuclear
32.0 %: cytoplasmic
8.0 %: cytoskeletal
8.0 %: mitochondrial
4.0 %: vacuolar
4.0 %: vesicles of secretory system

>> prediction for Contig-U01998-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 3
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0