Contig-U01996-1
Contig ID Contig-U01996-1
Contig update 2001. 8.29
Contig sequence
>Contig-U01996-1 (Contig-U01996-1Q) /CSM_Contig/Contig-U01996-1Q.Seq.d
AAATTGGGTAAACTTTTAACAAGTACAAGTTTTCAACATTTAGGAAAATT
AAAGAAACTTGTAATTTCAAATACAAATTTAGAAATGATTGATGATCAAG
CTTTCTCACCATTGAAATCAACATTGGAGGAATTGATTCTCGCTGGTAAC
TCATTACTTAAGAGCATACCAAGTTCGTTGTTAGATTGTAAACAATTGGA
GGTATTGGATCTAAGTAGTTGTGGTTTAAATCAGTTACCAGATTTATTTG
GTGCTTGTTTAACTTCAATTTTGGAATTAAATTTGGGTAATAATA-----
-----TATCACCATCATCATCATCAACTCCACCATCACCACAATATAATT
TAAATTCAAATGTAAATACAAATGTAAATAATAATATTAATAATAATAAT
AATATTTTAAATACAACATTATTTGAAATACCTGGACCAAAACCAATTAA
AGATCAAATTCAAATAATTTTACGTGTAGATATTAAAACAATAATGAAAA
GAATATTTGATGCAGTTGGTTTAACAAATAATGTTTCACCATTAATTCAA
CAACAACAATTGGTTACAATTGGTAATACAATTACACCCGCTCAACAAGA
ACTTGATAAGTTATTTGCTTGTTTAGGTATTAAAACTGATCATTTCAATT
TTAATTCACCAATACCTTCAAATTCTGATGAGAAAATTGTACAAATTAAA
AAAATTATAAATTTGAAATTGGAAAAAATTGCACTCTTTTCAAGATCACT
TTTGGAATATATTGATCATCAAAATCAATATCAATCAAATTCTCCAGATT
ATGATAAAAGAATTTCATTAATTTTTAATTCTTTAAATCAATTCACTTCA
AAATTAAATAAAATTTAATAAAAATAAAAATAAAAATTAATAAAAATAAA
ATAAAAATA

Gap gap included
Contig length 899
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 2056331
End point 2057231
Strand (PLUS/MINUS) PLUS
Number of clones 2
Number of EST 3
Link to clone list U01996
List of clone(s)

est1=SSM302F,1,296
est2=SSM302Z,297,890
est3=SLD395Z,460,901
Translated Amino Acid sequence
KLGKLLTSTSFQHLGKLKKLVISNTNLEMIDDQAFSPLKSTLEELILAGNSLLKSIPSSL
LDCKQLEVLDLSSCGLNQLPDLFGACLTSILELNLGNN---

---SPSSSSTPPSPQYNLNSNVNTNVNNNINNNNNILNTTLFEIPGPKPIKDQIQIILRV
DIKTIMKRIFDAVGLTNNVSPLIQQQQLVTIGNTITPAQQELDKLFACLGIKTDHFNFNS
PIPSNSDEKIVQIKKIINLKLEKIALFSRSLLEYIDHQNQYQSNSPDYDKRISLIFNSLN
QFTSKLNKI**k*k*klikik*k


Translated Amino Acid sequence (All Frames)
Frame A:
KLGKLLTSTSFQHLGKLKKLVISNTNLEMIDDQAFSPLKSTLEELILAGNSLLKSIPSSL
LDCKQLEVLDLSSCGLNQLPDLFGACLTSILELNLGNN---

---yhhhhhqlhhhhnii*iqm*iqm*iiiliiiiif*iqhylkyldqnqlkikfk*fyv
*ilkq**keylmqlv*qimfhh*fnnnnwlqlviqlhplnknlisyllv*vlkliisili
hqylqilmrklyklkkl*i*nwkklhsfqdhfwniliikininqilqimikefh*flil*
inslqn*ikfnknknkn**k*nkn

Frame B:
nwvnf*qvqvfni*en*rnl*fqiqi*k*lmiklshh*nqhwrn*fslvthylrayqvrc
*ivnnwrywi*vvvv*isyqiylvlv*lqfwn*iwvii---

---itiiiinstitti*fkfkckykck**y*****yfkynii*ntwtktn*rsnsnnftc
ry*nnnekni*cswfnk*cftinstttigynw*ynytrstrt**viclfry*n*sfqf*f
tntfkf**enctn*knykfeigknctlfkitfgiy*ssksisikfsrl**knfinf*ffk
sihfkik*nlikikikinknkiki

Frame C:
ig*tfnkykfstfrkiketcnfkykfrnd**ssfltieiniggidsrw*lit*ehtkfvv
rl*tiggigsk*lwfksvtrfiwclfnfnfgikfg**---

---SPSSSSTPPSPQYNLNSNVNTNVNNNINNNNNILNTTLFEIPGPKPIKDQIQIILRV
DIKTIMKRIFDAVGLTNNVSPLIQQQQLVTIGNTITPAQQELDKLFACLGIKTDHFNFNS
PIPSNSDEKIVQIKKIINLKLEKIALFSRSLLEYIDHQNQYQSNSPDYDKRISLIFNSLN
QFTSKLNKI**k*k*klikik*k

own update 2004. 6. 9
Homology vs CSM-cDNA
Query= Contig-U01996-1 (Contig-U01996-1Q)
/CSM_Contig/Contig-U01996-1Q.Seq.d
(909 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U01996-1 (Contig-U01996-1Q) /CSM_Contig/Conti... 638 0.0
Contig-U11010-1 (Contig-U11010-1Q) /CSM_Contig/Conti... 44 3e-04
Contig-U12437-1 (Contig-U12437-1Q) /CSM_Contig/Conti... 40 0.004
Contig-U11807-1 (Contig-U11807-1Q) /CSM_Contig/Conti... 40 0.004
Contig-U03961-1 (Contig-U03961-1Q) /CSM_Contig/Conti... 40 0.004
Contig-U01447-1 (Contig-U01447-1Q) /CSM_Contig/Conti... 40 0.004
Contig-U14197-1 (Contig-U14197-1Q) /CSM_Contig/Conti... 38 0.016
Contig-U13408-1 (Contig-U13408-1Q) /CSM_Contig/Conti... 38 0.016
Contig-U13162-1 (Contig-U13162-1Q) /CSM_Contig/Conti... 38 0.016
Contig-U12535-1 (Contig-U12535-1Q) /CSM_Contig/Conti... 38 0.016

>Contig-U01996-1 (Contig-U01996-1Q) /CSM_Contig/Contig-U01996-1Q.Seq.d
Length = 909

Score = 638 bits (322), Expect = 0.0
Identities = 352/352 (100%)
Strand = Plus / Plus


Query: 1 aaattgggtaaacttttaacaagtacaagttttcaacatttaggaaaattaaagaaactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaattgggtaaacttttaacaagtacaagttttcaacatttaggaaaattaaagaaactt 60


Query: 61 gtaatttcaaatacaaatttagaaatgattgatgatcaagctttctcaccattgaaatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtaatttcaaatacaaatttagaaatgattgatgatcaagctttctcaccattgaaatca 120


Query: 121 acattggaggaattgattctcgctggtaactcattacttaagagcataccaagttcgttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acattggaggaattgattctcgctggtaactcattacttaagagcataccaagttcgttg 180


Query: 181 ttagattgtaaacaattggaggtattggatctaagtagttgtggtttaaatcagttacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttagattgtaaacaattggaggtattggatctaagtagttgtggtttaaatcagttacca 240


Query: 241 gatttatttggtgcttgtttaacttcaattttggaattaaatttgggtaataatannnnn 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatttatttggtgcttgtttaacttcaattttggaattaaatttgggtaataatannnnn 300


Query: 301 nnnnntatcaccatcatcatcatcaactccaccatcaccacaatataattta 352
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 nnnnntatcaccatcatcatcatcaactccaccatcaccacaatataattta 352


Score = 569 bits (287), Expect = e-162
Identities = 287/287 (100%)
Strand = Plus / Plus


Query: 405 ttttaaatacaacattatttgaaatacctggaccaaaaccaattaaagatcaaattcaaa 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ttttaaatacaacattatttgaaatacctggaccaaaaccaattaaagatcaaattcaaa 464


Query: 465 taattttacgtgtagatattaaaacaataatgaaaagaatatttgatgcagttggtttaa 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 taattttacgtgtagatattaaaacaataatgaaaagaatatttgatgcagttggtttaa 524


Query: 525 caaataatgtttcaccattaattcaacaacaacaattggttacaattggtaatacaatta 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 caaataatgtttcaccattaattcaacaacaacaattggttacaattggtaatacaatta 584


Query: 585 cacccgctcaacaagaacttgataagttatttgcttgtttaggtattaaaactgatcatt 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 cacccgctcaacaagaacttgataagttatttgcttgtttaggtattaaaactgatcatt 644


Query: 645 tcaattttaattcaccaataccttcaaattctgatgagaaaattgta 691
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 tcaattttaattcaccaataccttcaaattctgatgagaaaattgta 691


Score = 236 bits (119), Expect = 3e-62
Identities = 119/119 (100%)
Strand = Plus / Plus


Query: 731 gcactcttttcaagatcacttttggaatatattgatcatcaaaatcaatatcaatcaaat 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gcactcttttcaagatcacttttggaatatattgatcatcaaaatcaatatcaatcaaat 790


Query: 791 tctccagattatgataaaagaatttcattaatttttaattctttaaatcaattcacttc 849
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 tctccagattatgataaaagaatttcattaatttttaattctttaaatcaattcacttc 849


>Contig-U11010-1 (Contig-U11010-1Q) /CSM_Contig/Contig-U11010-1Q.Seq.d
Length = 1379

Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 307 atcaccatcatcatcatcaact 328
||||||||||||||||||||||
Sbjct: 1240 atcaccatcatcatcatcaact 1261


>Contig-U12437-1 (Contig-U12437-1Q) /CSM_Contig/Contig-U12437-1Q.Seq.d
Length = 908

Score = 40.1 bits (20), Expect = 0.004
Identities = 20/20 (100%)
Strand = Plus / Minus


Query: 306 tatcaccatcatcatcatca 325
||||||||||||||||||||
Sbjct: 289 tatcaccatcatcatcatca 270


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 26,364
Number of Sequences: 6905
Number of extensions: 26364
Number of successful extensions: 4489
Number of sequences better than 10.0: 585
length of query: 909
length of database: 5,674,871
effective HSP length: 16
effective length of query: 893
effective length of database: 5,564,391
effective search space: 4969001163
effective search space used: 4969001163
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 5.12
Homology vs DNA
Query= Contig-U01996-1 (Contig-U01996-1Q) /CSM_Contig/Contig-U01996-1Q.Seq.d
(909 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU039032) Dictyostelium discoideum slug cDNA, clone SSM302. 533 0.0 3
(AU052478) Dictyostelium discoideum slug cDNA, clone SLD395. 424 e-150 2
(AU074871) Dictyostelium discoideum slug cDNA, clone SSM302. 476 e-130 1
(DL209203) Full length cDNA. 58 6e-04 1
(DD035911) Full length cDNA. 58 6e-04 1
(CQ842994) Sequence 1641 from Patent EP1440981. 58 6e-04 1
(AP006178) Homo sapiens genomic DNA, chromosome 8q24.22, clo... 58 6e-04 1
(AK125946) Homo sapiens cDNA FLJ43958 fis, clone TESTI401611... 58 6e-04 1
(AC080005) Homo sapiens 3 BAC RP11-475N22 (Roswell Park Canc... 58 6e-04 1
(AF301236) Homo sapiens chromosome 8 clone CTD-2269D11 map 8... 58 6e-04 1
(BZ604335) WHAAX48TF Human MCF7 breast cancer cell line libr... 58 6e-04 1
(AL954390) Mouse DNA sequence from clone RP23-13H18 on chrom... 56 0.002 1
(AC093482) Mus musculus clone RP23-79J2, WORKING DRAFT SEQUE... 56 0.002 1
(AC184199) Strongylocentrotus purpuratus clone R3-3032O21, W... 56 0.002 1
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 34 0.007 14
(AL353150) Human DNA sequence from clone RP11-82L18 on chrom... 54 0.010 1
(AL157388) Human DNA sequence from clone RP11-215A21 on chro... 54 0.010 1
(AC106865) Homo sapiens BAC clone RP11-153M7 from 4, complet... 54 0.010 1
(AC133677) Rattus norvegicus clone CH230-273H13, *** SEQUENC... 54 0.010 1
(AC125859) Rattus norvegicus clone CH230-35H21, *** SEQUENCI... 54 0.010 1
(AC125591) Rattus norvegicus clone CH230-9F22, *** SEQUENCIN... 54 0.010 1
(AC120669) Rattus norvegicus clone CH230-22G10, WORKING DRAF... 54 0.010 1
(AC114884) Rattus norvegicus strain Brown Norway clone RP31-... 54 0.010 1
(AC114039) Rattus norvegicus clone CH230-186D12, *** SEQUENC... 54 0.010 1
(AC110651) Rattus norvegicus clone CH230-81I7, WORKING DRAFT... 54 0.010 1
(AC110115) Rattus norvegicus clone CH230-307P7, *** SEQUENCI... 54 0.010 1
(AC105455) Rattus norvegicus clone CH230-1I15, *** SEQUENCIN... 54 0.010 1
(AC104773) Homo sapiens chromosome 4 clone RP11-4D13, WORKIN... 54 0.010 1
(AC095715) Rattus norvegicus clone CH230-9D18, *** SEQUENCIN... 54 0.010 1
(AC095171) Rattus norvegicus clone CH230-7K10, WORKING DRAFT... 54 0.010 1
(AC091352) Rattus norvegicus clone CH230-1B19, *** SEQUENCIN... 54 0.010 1
(BX572642) Human DNA sequence *** SEQUENCING IN PROGRESS ***... 54 0.010 1
(AC212679) Pongo abelii chromosome 16 clone CH276-337O9, WOR... 54 0.010 1
(AC181162) Strongylocentrotus purpuratus clone R3-16C12, WOR... 54 0.010 1
(AC181057) Strongylocentrotus purpuratus clone R3-3049I5, WO... 54 0.010 1
(AC181049) Strongylocentrotus purpuratus clone R3-3050K15, W... 54 0.010 1
(AC178785) Strongylocentrotus purpuratus clone R3-29P4, WORK... 54 0.010 1
(AC178730) Strongylocentrotus purpuratus clone R3-13D8, WORK... 54 0.010 1
(AC178525) Strongylocentrotus purpuratus clone R3-3032J21, W... 54 0.010 1
(AC178126) Strongylocentrotus purpuratus clone R3-3075A16, W... 54 0.010 1
(AC176570) Strongylocentrotus purpuratus clone R3-3077A08, W... 54 0.010 1
(AC168384) Strongylocentrotus purpuratus clone R3-4013C4, WO... 54 0.010 1
(AC013303) Homo sapiens clone RP11-4D13, WORKING DRAFT SEQUE... 54 0.010 1
(BZ185874) CH230-473P17.TJ CHORI-230 Segment 2 Rattus norveg... 54 0.010 1
(AG095704) Pan troglodytes DNA, clone: PTB-096N16.R. 54 0.010 1
(DV611877) EST1214873 Glossina morsitans morsitans Fat body ... 54 0.010 1
(BI041018) IL3-NT0280-140201-455-E03 NT0280 Homo sapiens cDN... 54 0.010 1
(BF999744) RC2-GN0136-111100-012-b08 GN0136 Homo sapiens cDN... 54 0.010 1
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 40 0.026 9
(AC138589) Mus musculus chromosome 1, clone RP24-153C14, com... 52 0.038 1
(AC129555) Mus musculus chromosome 5, clone RP24-90F19, comp... 52 0.038 1
(AC115905) Mus musculus chromosome 1, clone RP24-472N17, com... 52 0.038 1
(CQ342489) Sequence 16583 from Patent WO0157275. 52 0.038 1
(CQ329738) Sequence 3832 from Patent WO0157275. 52 0.038 1
(CQ305288) Sequence 16393 from Patent WO0186003. 52 0.038 1
(CQ292752) Sequence 3857 from Patent WO0186003. 52 0.038 1
(CQ268254) Sequence 16515 from Patent WO0157277. 52 0.038 1
(CQ255656) Sequence 3917 from Patent WO0157277. 52 0.038 1
(CQ230106) Sequence 16945 from Patent WO0157273. 52 0.038 1
(CQ217078) Sequence 3917 from Patent WO0157273. 52 0.038 1
(CQ206688) Sequence 8965 from Patent WO0157271. 52 0.038 1
(CQ201552) Sequence 3829 from Patent WO0157271. 52 0.038 1
(CQ182292) Sequence 13688 from Patent WO0157274. 52 0.038 1
(CQ172380) Sequence 3776 from Patent WO0157274. 52 0.038 1
(CQ146881) Sequence 16903 from Patent WO0157276. 52 0.038 1
(CQ133842) Sequence 3864 from Patent WO0157276. 52 0.038 1
(CQ108252) Sequence 17111 from Patent WO0157272. 52 0.038 1
(CQ095094) Sequence 3953 from Patent WO0157272. 52 0.038 1
(CQ077251) Sequence 13051 from Patent WO0157278. 52 0.038 1
(CQ068034) Sequence 3834 from Patent WO0157278. 52 0.038 1
(CQ057943) Sequence 8763 from Patent WO0157270. 52 0.038 1
(CQ052940) Sequence 3760 from Patent WO0157270. 52 0.038 1
(AP006262) Homo sapiens genomic DNA, 8q24.3, PCR product: KP... 52 0.038 1
(AL583962) Human DNA sequence from clone LA20-VLA2066F10L on... 52 0.038 1
(AC005291) Homo sapiens chromosome 17, clone hRPK.401_O_9, c... 52 0.038 1
(AC135579) Rattus norvegicus clone CH230-425K12, *** SEQUENC... 52 0.038 1
(AC126075) Rattus norvegicus clone CH230-476O5, *** SEQUENCI... 52 0.038 1
(AC125840) Rattus norvegicus clone CH230-55A4, *** SEQUENCIN... 52 0.038 1
(AC095373) Rattus norvegicus clone CH230-1P12, *** SEQUENCIN... 52 0.038 1
(FP236143) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 52 0.038 1
(AC201072) Strongylocentrotus purpuratus clone R3-13A3, WORK... 52 0.038 1
(AC199672) Eulemur macaco macaco clone CH273-53G10, WORKING ... 52 0.038 1
(AC184451) Strongylocentrotus purpuratus clone R3-3086F17, W... 52 0.038 1
(AC181940) Strongylocentrotus purpuratus clone R3-1009D16, W... 52 0.038 1
(AC180547) Strongylocentrotus purpuratus clone R3-3096O15, W... 52 0.038 1
(AC178237) Strongylocentrotus purpuratus clone R3-3086C18, W... 52 0.038 1
(AC176351) Strongylocentrotus purpuratus clone R3-3049B1, WO... 52 0.038 1
(AC168666) Strongylocentrotus purpuratus clone R3-3015M17, W... 52 0.038 1
(CR689378) Tetraodon nigroviridis full-length cDNA. 52 0.038 1
(CR667254) Tetraodon nigroviridis full-length cDNA. 52 0.038 1
(CR636166) Tetraodon nigroviridis full-length cDNA. 52 0.038 1
(AZ208128) SP_0136_B1_D12_SP6E Strongylocentrotus purpuratus... 52 0.038 1
(BU027509) QHG6B20.yg.ab1 QH_EFGHJ sunflower RHA280 Helianth... 52 0.038 1
(AC007825) Drosophila melanogaster, chromosome 3R, region 96... 38 0.075 4
(AC106289) Rattus norvegicus clone CH230-70G1, *** SEQUENCIN... 36 0.089 2
(AC177566) Strongylocentrotus purpuratus clone R3-1026E11, W... 36 0.091 2
(AC179675) Strongylocentrotus purpuratus clone R3-1021O8, WO... 36 0.091 2
(AC176497) Strongylocentrotus purpuratus clone R3-3072G14, W... 46 0.092 2
(AC173361) Strongylocentrotus purpuratus clone R3-1113J20, W... 36 0.093 2
(ER557536) 1093015715764 Global-Ocean-Sampling_GS-36-01-01-2... 36 0.12 2
(FM172656) Oryzias latipes EST, clone M074--C11_091. 38 0.12 2
(AC125960) Rattus norvegicus clone CH230-345N9, *** SEQUENCI... 46 0.15 5
(BX294380) Zebrafish DNA sequence from clone DKEY-58N10 in l... 50 0.15 1
(AC113104) Mus musculus chromosome 18, clone RP23-321L15, co... 50 0.15 1
(AC102610) Mus musculus chromosome 19, clone RP23-411P21, co... 50 0.15 1
(AC187621) Pan troglodytes BAC clone CH251-458G17 from chrom... 50 0.15 1
(BX537318) Human DNA sequence from clone CITF22-92A6 on chro... 50 0.15 1
(AL137001) Human DNA sequence from clone RP11-301J16 on chro... 50 0.15 1
(AC016182) Homo sapiens chromosome 17, clone RP11-559N14, co... 50 0.15 1
(AC159718) Bos taurus clone CH240-81E1, WORKING DRAFT SEQUEN... 50 0.15 1
(AC141810) Apis mellifera clone CH224-61C7, WORKING DRAFT SE... 50 0.15 1
(AC141377) Rattus norvegicus clone CH230-259J22, WORKING DRA... 50 0.15 1
(AC139855) Mus musculus chromosome 1 clone RP23-195M16 map 1... 50 0.15 1
(AC135684) Rattus norvegicus clone CH230-266I24, *** SEQUENC... 50 0.15 1
(AC132523) Rattus norvegicus clone CH230-440A17, WORKING DRA... 50 0.15 1
(AC128333) Rattus norvegicus clone CH230-107I5, *** SEQUENCI... 50 0.15 1
(AC125690) Rattus norvegicus clone CH230-39B7, *** SEQUENCIN... 50 0.15 1
(AC118297) Rattus norvegicus clone CH230-24E4, WORKING DRAFT... 50 0.15 1
(AC111965) Rattus norvegicus clone CH230-185I9, WORKING DRAF... 50 0.15 1
(AC111789) Rattus norvegicus clone CH230-79F8, *** SEQUENCIN... 50 0.15 1
(AC107291) Rattus norvegicus clone CH230-96I5, WORKING DRAFT... 50 0.15 1
(AC107004) Rattus norvegicus clone CH230-272H14, WORKING DRA... 50 0.15 1
(AC095218) Rattus norvegicus clone CH230-9L13, *** SEQUENCIN... 50 0.15 1
(AC181331) Strongylocentrotus purpuratus clone R3-4018L22, W... 50 0.15 1
(AC179007) Strongylocentrotus purpuratus clone R3-1108K21, W... 50 0.15 1
(DH772441) Rattus norvegicus DNA, BAC clone: RNB1-357N11, 5'... 50 0.15 1
(CL100618) ISB1-36A1_Sp6.1 ISB1 Xenopus (Silurana) tropicali... 50 0.15 1
(CL099951) ISB1-33H24_Sp6.1 ISB1 Xenopus (Silurana) tropical... 50 0.15 1
(CL099711) ISB1-33B22_Sp6.1 ISB1 Xenopus (Silurana) tropical... 50 0.15 1
(FD350842) CBPN2980.b1 CBPN: Subtracted channel catfish cDNA... 50 0.15 1
(FC831266) CBHI3926.fwd CBHI Metridium senile tentacle Metri... 50 0.15 1
(EY391636) CAXA9375.rev CAXA Helobdella robusta Subtracted L... 50 0.15 1
(EY372455) CAXA14020.rev CAXA Helobdella robusta Subtracted ... 50 0.15 1
(EX471974) 1T-519 Subtracted cDNA Libraries of Differencial ... 50 0.15 1
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 38 0.19 11
(AY160105) Dictyostelium discoideum nucleotide exchange fact... 38 0.22 4
(AC174263) Strongylocentrotus purpuratus clone R3-3088H7, **... 44 0.28 3
(AC181820) Strongylocentrotus purpuratus clone R3-1023J6, WO... 48 0.31 2
(AC098289) Rattus norvegicus clone CH230-1K23, WORKING DRAFT... 36 0.33 2
(AC133032) Rattus norvegicus clone CH230-66I16, *** SEQUENCI... 36 0.33 2
(AC137448) Rattus norvegicus clone CH230-unknown, WORKING DR... 36 0.33 2
(AC122520) Mus musculus BAC clone RP24-470M22 from 6, comple... 46 0.33 3
(AC207294) Macaca mulatta chromosome UNKNOWN clone CH250-513... 38 0.34 2
(AC124986) Mus musculus clone RP24-335F24, WORKING DRAFT SEQ... 36 0.34 2
(AC024517) Homo sapiens chromosome 1 clone RP11-168B8 map 1,... 46 0.34 2
(AL158800) Human chromosome 14 DNA sequence BAC R-359N5 of l... 34 0.34 2
(AC102022) Mus musculus chromosome 8, clone RP24-67K5, compl... 36 0.34 2
(AC174868) Pan troglodytes BAC clone CH251-401P11 from chrom... 36 0.34 2
(EY295351) CAWX12203.rev CAWX Helobdella robusta Primary Ear... 38 0.39 2
(BJ345136) Dictyostelium discoideum cDNA clone:dda21a20, 3' ... 46 0.41 2
(EK436368) 1095521050151 Global-Ocean-Sampling_GS-31-01-01-1... 46 0.42 2
(EH011567) USDA-FP_184554 Lysiphlebus testaceipes adult whol... 38 0.44 2
(DX433385) BE1075_H05_R IASMA L1 HindIII BAC library Vitis v... 40 0.45 2
(AC095637) Rattus norvegicus clone CH230-8K5, *** SEQUENCING... 46 0.46 2
(DW677858) HC-H-S01-0209-LF heat-induced haemocyte cDNA libr... 38 0.46 2
(EK432594) 1095516165301 Global-Ocean-Sampling_GS-31-01-01-1... 46 0.55 2
(AF079445) Dictyostelium discoideum TipC (tipC) gene, comple... 32 0.56 5
(AF106951) Xenopus laevis methyl-CpG-binding protein MeCP2 (... 48 0.60 1
(AF051768) Xenopus laevis methyl-CpG-binding protein 2 mRNA,... 48 0.60 1
(AL672060) Mouse DNA sequence from clone RP23-423L11 on chro... 48 0.60 1
(AL671118) Mouse DNA sequence from clone RP23-256J17 on chro... 48 0.60 1
(AL669814) Mouse DNA sequence from clone RP23-431J18 on chro... 48 0.60 1
(AL592080) Mouse DNA sequence from clone RP23-102H10 on chro... 48 0.60 1
(AC164579) Mus musculus 6 BAC RP23-384P24 (Roswell Park Canc... 48 0.60 1
(AC163327) Mus musculus chromosome 1, clone RP24-297J20, com... 48 0.60 1
(AC158662) Mus musculus 6 BAC RP23-20K24 (Roswell Park Cance... 48 0.60 1
(AC138640) Mus musculus chromosome 1, clone RP23-463G19, com... 48 0.60 1
(AC121850) Mus musculus BAC clone RP24-92E18 from chromosome... 48 0.60 1
(AC091605) Mus musculus Strain C57BL6/J Chromosome X BAC, RP... 48 0.60 1
(AC188419) Pan troglodytes BAC clone CH251-305M6 from chromo... 48 0.60 1
(AC186397) Pan troglodytes BAC clone CH251-2O12 from chromos... 48 0.60 1
(AC160143) Pan troglodytes BAC clone CH251-565M18 from chrom... 48 0.60 1
(AL596275) Human DNA sequence from clone RP11-183G22 on chro... 48 0.60 1
(AC141001) Homo sapiens X BAC RP11-1051N9 (Roswell Park Canc... 48 0.60 1
(AC138512) Homo sapiens chromosome 16 clone RP11-93B18, comp... 48 0.60 1
(AC134312) Homo sapiens chromosome 16 clone RP11-863P13, com... 48 0.60 1
(AC073094) Homo sapiens BAC clone RP11-369D24 from 7, comple... 48 0.60 1
(AC011454) Homo sapiens chromosome 19 clone CTC-347E6, compl... 48 0.60 1
(AC160519) Lytechinus variegatus clone BAC 199M10, *** SEQUE... 48 0.60 1
(AC158610) Mus musculus clone RP23-223K8, WORKING DRAFT SEQU... 48 0.60 1
(AC140399) Mus musculus chromosome UNK clone RP24-89F16, WOR... 48 0.60 1
(AC130056) Rattus norvegicus clone CH230-206B18, WORKING DRA... 48 0.60 1
(AC127098) Rattus norvegicus clone CH230-216A12, WORKING DRA... 48 0.60 1
(AC126481) Rattus norvegicus clone CH230-37H21, WORKING DRAF... 48 0.60 1
(AC126286) Rattus norvegicus clone CH230-127F4, WORKING DRAF... 48 0.60 1
(AC120255) Rattus norvegicus clone CH230-489C24, WORKING DRA... 48 0.60 1
(AC118349) Rattus norvegicus clone CH230-311H4, *** SEQUENCI... 48 0.60 1
(AC112738) Rattus norvegicus clone CH230-116O10, WORKING DRA... 48 0.60 1
(AC110445) Rattus norvegicus clone CH230-326G6, *** SEQUENCI... 48 0.60 1
(AC109943) Rattus norvegicus clone CH230-221B3, *** SEQUENCI... 48 0.60 1
(AC109884) Rattus norvegicus clone CH230-311K19, WORKING DRA... 48 0.60 1
(AC107430) Rattus norvegicus clone CH230-145H22, WORKING DRA... 48 0.60 1
(AC106515) Rattus norvegicus clone CH230-105P5, WORKING DRAF... 48 0.60 1
(AC096175) Rattus norvegicus clone CH230-11N23, WORKING DRAF... 48 0.60 1
(AC096097) Rattus norvegicus clone CH230-24N16, *** SEQUENCI... 48 0.60 1
(AC094732) Rattus norvegicus clone CH230-5I6, WORKING DRAFT ... 48 0.60 1
(CU928524) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.60 1
(AC087097) Mus musculus chromosome 11 clone RP23-93F18, WORK... 48 0.60 1
(AC055704) Mus musculus strain C57BL6/J clone RP23-20K24, WO... 48 0.60 1
(AC201690) Strongylocentrotus purpuratus clone R3-4009D10, W... 48 0.60 1
(AC193067) Microcebus murinus clone CH257-258N1, WORKING DRA... 48 0.60 1
(AC184300) Strongylocentrotus purpuratus clone R3-37K15, WOR... 48 0.60 1
(AC180753) Strongylocentrotus purpuratus clone R3-3077H15, W... 48 0.60 1
(AC180681) Strongylocentrotus purpuratus clone R3-3087P23, W... 48 0.60 1
(AC179703) Strongylocentrotus purpuratus clone R3-1021J10, W... 48 0.60 1
(AC179380) Strongylocentrotus purpuratus clone R3-59O6, WORK... 48 0.60 1
(AC179133) Strongylocentrotus purpuratus clone R3-4011N21, W... 48 0.60 1
(AC178905) Strongylocentrotus purpuratus clone R3-1112F5, WO... 48 0.60 1
(AC177129) Strongylocentrotus purpuratus clone R3-1035N5, WO... 48 0.60 1
(AC176909) Strongylocentrotus purpuratus clone R3-1104M4, WO... 48 0.60 1
(AC176802) Strongylocentrotus purpuratus clone R3-3109A24, W... 48 0.60 1
(AC176057) Strongylocentrotus purpuratus clone R3-3024F12, W... 48 0.60 1
(ER452189) 1092963853973 Global-Ocean-Sampling_GS-35-01-01-1... 48 0.60 1
(EJ134712) 1092343590761 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.60 1
(EJ126213) 1092343394555 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.60 1
(DE842728) Macropus eugenii DNA, BAC clone: MEB1-002P12_F, 5... 48 0.60 1
(BJ076698) Xenopus laevis cDNA clone:XL058h17, 3' end, singl... 48 0.60 1
(BJ052015) Xenopus laevis cDNA clone:XL040b21, 3' end, singl... 48 0.60 1
(GE569622) CCHT4195.b1_F18.ab1 CCHT Niger Seed Guizotia abys... 48 0.60 1
(GE551455) CCHT10174.b1_L23.ab1 CCHT Niger Seed Guizotia aby... 48 0.60 1
(EY293894) CAWX11378.rev CAWX Helobdella robusta Primary Ear... 48 0.60 1
(AC134926) Oryza sativa Japonica Group chromosome 11 clone O... 42 0.60 4
(AC179756) Strongylocentrotus purpuratus clone R3-1018A10, W... 38 0.65 5
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 34 0.69 9
(AC177234) Strongylocentrotus purpuratus clone R3-1034H24, W... 38 0.72 6
(AY254473) Dictyostelium discoideum nucleotide exchange fact... 36 0.75 3
(AC181791) Strongylocentrotus purpuratus clone R3-1029I18, W... 40 0.84 3
(BX549169) Glossina morsitans morsitans (Tseatse fly) EST fr... 40 0.96 2
(AC115607) Dictyostelium discoideum chromosome 2 map 4559693... 36 1.0 6
(AY445095) Homo sapiens nitric oxide synthase 1 (neuronal) (... 46 1.1 2
(CZ039808) OM__Ba0021G21.r OM__Ba Oryza minuta genomic clone... 40 1.1 2
(EX454801) sq2d24e87e Alexandrium catenella ACC07 expressed ... 38 1.1 2
(AC120684) Rattus norvegicus clone CH230-13M5, *** SEQUENCIN... 46 1.2 2
(AC109661) Rattus norvegicus clone CH230-112B22, WORKING DRA... 32 1.2 2
(AC098636) Rattus norvegicus clone CH230-148F22, WORKING DRA... 46 1.2 2
(AL831790) Mouse DNA sequence from clone RP23-334I5 on chrom... 46 1.2 2
(AC128263) Rattus norvegicus clone CH230-234G11, WORKING DRA... 34 1.2 2
(AC198663) Pan troglodytes chromosome 10 clone CH251-693M2, ... 32 1.2 2
(CW999369) OA_BBa0080N19.f OA_BBa Oryza alta genomic clone O... 40 1.2 2
(AC008734) Homo sapiens chromosome 19 clone CTD-2529P6, comp... 34 1.2 2
(AC159818) Mus musculus BAC clone RP23-244M3 from chromosome... 42 1.2 2
(AC184350) Strongylocentrotus purpuratus clone R3-3111D12, W... 36 1.2 2
(AC178448) Strongylocentrotus purpuratus clone R3-1118G21, W... 36 1.2 2
(AC110496) Mus musculus chromosome 7, clone RP23-56P3, compl... 32 1.2 2
(AC177594) Strongylocentrotus purpuratus clone R3-1023P7, WO... 32 1.2 2
(AC068799) Homo sapiens 12 BAC RP11-331O1 (Roswell Park Canc... 46 1.2 2
(AC136911) Homo sapiens chromosome 16 clone RP11-933C23, WOR... 36 1.2 2
(AC135782) Homo sapiens chromosome 16 clone CTD-2555A7, comp... 36 1.2 2
(CS741980) Sequence 9976 from Patent WO2005083127. 34 1.2 2
(AC101941) Mus musculus chromosome 7, clone RP24-112F21, com... 32 1.2 2
(CT485994) RP43-077B08, complete sequence. 44 1.2 5
(AC008749) Homo sapiens chromosome 19 clone CTD-2611O12, com... 36 1.2 2
(AC176641) Strongylocentrotus purpuratus clone R3-3080M02, W... 32 1.3 2
(AC023183) Homo sapiens clone RP11-677L3, WORKING DRAFT SEQU... 46 1.3 2
(DD389766) CA125 Gene and Its Use for Diagnostic and Therape... 34 1.3 2
(AF362376) Dictyostelium discoideum histidine kinase DhkK (d... 32 1.4 3
(AC180286) Strongylocentrotus purpuratus clone R3-3121K19, W... 46 1.4 4
(AC180779) Strongylocentrotus purpuratus clone R3-3076A23, W... 44 1.5 3
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 36 1.5 11
(EH743783) CNMS3473.b1_A05.ab1 CNM(LMS) spotted knapweed Cen... 38 1.5 2
(AP008036) Lotus japonicus genomic DNA, chromosome 4, clone:... 42 1.6 3
(DU076925) 88629 Tomato HindIII BAC Library Solanum lycopers... 36 1.6 2
(AX440174) Sequence 27 from Patent WO0190154. 34 1.6 2
(AX440175) Sequence 28 from Patent WO0190154. 34 1.6 2
(ER311475) 1092343796479 Global-Ocean-Sampling_GS-34-01-01-1... 34 1.6 2
(EB333914) CNSN01-F-140493-501 Normalized CNS library (juven... 32 1.6 2
(AX440177) Sequence 30 from Patent WO0190154. 34 1.6 2
(AC164898) Bos taurus clone CH240-155D1, *** SEQUENCING IN P... 46 1.7 2
(CS771067) Sequence 39063 from Patent WO2005083127. 34 1.7 2
(BZ451560) BONLV70TF BO_1.6_2_KB_tot Brassica oleracea genom... 42 1.8 2
(AP010292) Lotus japonicus genomic DNA, chromosome 1, clone:... 40 1.8 3
(BV693767) CqfSI_AAC58 Cronartium nuclear microsatellite seq... 34 1.8 3
(AC131501) Lytechinus variegatus clone Lv53J24, *** SEQUENCI... 42 1.9 2
(AL928637) Zebrafish DNA sequence from clone CH211-227I6. 38 2.0 9
(AL354927) Human DNA sequence *** SEQUENCING CANCELLED *** f... 40 2.1 4
(AC022542) Homo sapiens chromosome 10 clone RP11-537G20, com... 40 2.2 6
(AU060445) Dictyostelium discoideum slug cDNA, clone SLJ756. 40 2.2 2
(AL590065) Human DNA sequence from clone RP11-307A17 on chro... 44 2.2 6
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975... 32 2.3 9
(CU694490) Zebrafish DNA sequence from clone ZFOS-433A6 in l... 46 2.4 1
(BX469934) Zebrafish DNA sequence from clone CH211-209P5 in ... 46 2.4 1
(AF344167) Oryza sativa subsp. indica microsatellite marker ... 46 2.4 1
(AB149729) Homo sapiens DNA, STS on chromosome 12, D12S0713i... 46 2.4 1
(CU210846) Mouse DNA sequence from clone DN-297B1 on chromos... 46 2.4 1
(CT010476) Mouse DNA sequence from clone RP23-339L19 on chro... 46 2.4 1
(AL833803) Mouse DNA sequence from clone RP23-244H7 on chrom... 46 2.4 1
(AL731687) Mouse DNA sequence from clone RP23-56I20 on chrom... 46 2.4 1
(AL672219) Mouse DNA sequence from clone RP23-456B9 on chrom... 46 2.4 1
(AL606925) Mouse DNA sequence from clone RP23-12J1 on chromo... 46 2.4 1
(AC165273) Mus musculus BAC clone RP24-267I1 from chromosome... 46 2.4 1
(AC165240) Mus musculus chromosome 5, clone RP24-174P7, comp... 46 2.4 1
(AC164631) Mus musculus 6 BAC RP23-359M3 (Roswell Park Cance... 46 2.4 1
(AC160105) Mus musculus BAC clone RP24-353L12 from chromosom... 46 2.4 1
(AC159204) Mus musculus BAC clone RP23-229H13 from chromosom... 46 2.4 1
(AC154576) Mus musculus BAC clone RP23-372B6 from chromosome... 46 2.4 1
(AC154472) Mus musculus BAC clone RP24-120L6 from chromosome... 46 2.4 1
(AC154299) Mus musculus BAC clone RP23-402I16 from chromosom... 46 2.4 1
(AC153498) Mus musculus 10 BAC RP23-353P23 (Roswell Park Can... 46 2.4 1
(AC137107) Mus musculus chromosome 5, clone RP23-274I21, com... 46 2.4 1
(AC132610) Mus musculus BAC clone RP23-374N15 from chromosom... 46 2.4 1
(AC132050) Rattus norvegicus 20 BAC CH230-118G13 (Children's... 46 2.4 1
(AC127285) Mus musculus BAC clone RP23-336P20 from chromosom... 46 2.4 1
(AC119382) Rattus norvegicus 4 BAC CH230-125G2 (Children's H... 46 2.4 1
(AC113113) Mus musculus chromosome 16, clone RP23-334P10, co... 46 2.4 1
(AC112739) Rattus norvegicus 7 BAC CH230-108A12 (Children's ... 46 2.4 1
(AC110170) Mus musculus chromosome 12, clone RP23-301G24, co... 46 2.4 1
(AC108825) Mus musculus chromosome 19, clone RP23-103N22, co... 46 2.4 1
(AC108321) Rattus norvegicus BAC CH230-261E4 (Children's Hos... 46 2.4 1
(AC102999) Rattus norvegicus 7 BAC CH230-33J22 (Children's H... 46 2.4 1
(AC102342) Mus musculus chromosome 18, clone RP23-250K3, com... 46 2.4 1
(AC101542) Mus musculus chromosome 19, clone RP23-456B17, co... 46 2.4 1
(AC202602) Rhesus Macaque BAC CH250-393G10 () complete sequ... 46 2.4 1
(AC161006) Pan troglodytes BAC clone CH251-842O13 from chrom... 46 2.4 1
(AC160938) Pan troglodytes BAC clone CH251-901A9 from chromo... 46 2.4 1
(AC147120) Pan troglodytes BAC clone CH251-531L7 from Y, com... 46 2.4 1
(EU162611) Capsella rubella clone contig46 BAC sequence. 46 2.4 1
(AP008212) Oryza sativa (japonica cultivar-group) genomic DN... 46 2.4 1
(AP003573) Oryza sativa Japonica Group genomic DNA, chromoso... 46 2.4 1
(AP003571) Oryza sativa Japonica Group genomic DNA, chromoso... 46 2.4 1
(AL161492) Arabidopsis thaliana DNA chromosome 4, contig fra... 46 2.4 1
(AF096370) Arabidopsis thaliana BAC F11O4. 46 2.4 1
(EA688683) Sequence 67562 from patent US 7365185. 46 2.4 1
(EA116740) Sequence 924 from patent US 7205146. 46 2.4 1
(EA116513) Sequence 697 from patent US 7205146. 46 2.4 1
(DJ466672) Method for analysing genome using microsatellite ... 46 2.4 1
(DD331557) A method for evaluating risk of hypertension. 46 2.4 1
(CQ812866) Sequence 18 from Patent WO2004039839. 46 2.4 1
(GC853634) Sequence 168879 from patent US 6812339. 46 2.4 1
(GC724436) Sequence 39681 from patent US 6812339. 46 2.4 1
(GC698520) Sequence 13765 from patent US 6812339. 46 2.4 1
(CR974570) Pig DNA sequence from clone CH242-206F5 on chromo... 46 2.4 1
(EF671829) Drosophila melanogaster strain fsp28 R6 locus gen... 46 2.4 1
(EF207629) Excirolana hirsuticauda clone Ehir16 microsatelli... 46 2.4 1
(AF468572) Crassostrea gigas clone c055 microsatellite seque... 46 2.4 1
(FJ770081) Homo sapiens chromosome 7 PCR sequence PCR_NA1895... 46 2.4 1
(AP000859) Homo sapiens genomic DNA, chromosome 11q clone:CM... 46 2.4 1
(AL139254) Human DNA sequence from clone RP4-749H3 on chromo... 46 2.4 1
(AL117329) Human DNA sequence from clone RP11-191L9 on chrom... 46 2.4 1
(AL023586) Human DNA sequence from clone RP3-426F10 on chrom... 46 2.4 1
(AK093686) Homo sapiens cDNA FLJ36367 fis, clone THYMU2007854. 46 2.4 1
(AC226118) Homo sapiens BAC clone CH15-135D13 from chromosom... 46 2.4 1
(AC139149) Homo sapiens chromosome 17, clone RP13-766D20, co... 46 2.4 1
(AC137896) Homo sapiens chromosome 17, clone RP11-765O14, co... 46 2.4 1
(AC092723) Homo sapiens chromosome 16 clone RP11-542M13, com... 46 2.4 1
(AC090667) Homo sapiens 12q BAC RP11-791L7 (Roswell Park Can... 46 2.4 1
(AC087892) Homo sapiens 12q BAC RP11-3L23 (Roswell Park Canc... 46 2.4 1
(AC087880) Homo sapiens 12q BAC RP11-121J20 (Roswell Park Ca... 46 2.4 1
(AC073912) Homo sapiens 12 BAC RP11-989F5 (Roswell Park Canc... 46 2.4 1
(AC021218) Homo sapiens BAC clone RP11-525O1 from 7, complet... 46 2.4 1
(AC012629) Homo sapiens chromosome 5 clone CTD-2154B17, comp... 46 2.4 1
(AC009158) Homo sapiens chromosome 16 clone RP11-67I10, comp... 46 2.4 1
(AC007623) Homo sapiens 12 BAC RP11-608E13 (Roswell Park Can... 46 2.4 1
(AC007240) Homo sapiens BAC clone RP11-83M8 from 2, complete... 46 2.4 1
(AC007221) Homo sapiens chromosome 16 clone RPCI-11_418I22, ... 46 2.4 1
(AC007218) Homo sapiens chromosome 16 clone RP11-297M9, comp... 46 2.4 1
(AC004933) Homo sapiens PAC clone RP5-952L21 from 7p22-p2, c... 46 2.4 1
(AC161390) Bos taurus clone CH240-91L12, WORKING DRAFT SEQUE... 46 2.4 1
(AC156395) Mus musculus clone RP24-66H4, WORKING DRAFT SEQUE... 46 2.4 1
(AC153186) Bos taurus clone CH240-29D19, WORKING DRAFT SEQUE... 46 2.4 1
(AC149902) Strongylocentrotus purpuratus clone R3-12E1, WORK... 46 2.4 1
(AC140115) Rattus norvegicus clone CH230-303C17, WORKING DRA... 46 2.4 1
(AC139606) Rattus norvegicus clone CH230-388D19, WORKING DRA... 46 2.4 1
(AC139515) Rattus norvegicus clone CH230-175E5, WORKING DRAF... 46 2.4 1
(AC138160) Rattus norvegicus strain Brown Norway clone RP31-... 46 2.4 1
(AC137436) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 46 2.4 1
(AC137301) Rattus norvegicus clone CH230-unknown, WORKING DR... 46 2.4 1
(AC137279) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 46 2.4 1
(AC137057) Rattus norvegicus strain Brown Norway clone CH230... 46 2.4 1
(AC137029) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 46 2.4 1
(AC136802) Rattus norvegicus clone CH230-209E12, *** SEQUENC... 46 2.4 1
(AC135659) Rattus norvegicus clone CH230-474E11, *** SEQUENC... 46 2.4 1
(AC135571) Rattus norvegicus clone CH230-347P8, WORKING DRAF... 46 2.4 1
(AC135374) Rattus norvegicus clone CH230-198J8, WORKING DRAF... 46 2.4 1
(AC135032) Rattus norvegicus clone CH230-470H5, WORKING DRAF... 46 2.4 1
(AC134514) Rattus norvegicus clone CH230-10I11, WORKING DRAF... 46 2.4 1
(AC133442) Rattus norvegicus clone CH230-195P21, WORKING DRA... 46 2.4 1
(AC133434) Rattus norvegicus clone CH230-55G16, WORKING DRAF... 46 2.4 1
(AC133365) Rattus norvegicus clone CH230-61L8, *** SEQUENCIN... 46 2.4 1
(AC133343) Rattus norvegicus clone CH230-21A19, WORKING DRAF... 46 2.4 1
(AC133266) Rattus norvegicus clone CH230-270O9, WORKING DRAF... 46 2.4 1
(AC132695) Rattus norvegicus clone CH230-141I19, WORKING DRA... 46 2.4 1
(AC132638) Rattus norvegicus clone CH230-208O13, WORKING DRA... 46 2.4 1
(AC132497) Rattus norvegicus clone CH230-510B4, *** SEQUENCI... 46 2.4 1
(AC131962) Rattus norvegicus clone CH230-299N22, WORKING DRA... 46 2.4 1
(AC130131) Rattus norvegicus clone CH230-112N9, *** SEQUENCI... 46 2.4 1
(AC130110) Rattus norvegicus clone CH230-55M4, *** SEQUENCIN... 46 2.4 1
(AC129738) Rattus norvegicus clone CH230-510D12, WORKING DRA... 46 2.4 1
(AC129701) Rattus norvegicus clone CH230-10D9, WORKING DRAFT... 46 2.4 1
(AC128976) Rattus norvegicus clone CH230-90D18, *** SEQUENCI... 46 2.4 1
(AC128503) Rattus norvegicus clone CH230-32M10, *** SEQUENCI... 46 2.4 1
(AC128321) Rattus norvegicus clone CH230-229D19, *** SEQUENC... 46 2.4 1
(AC128178) Rattus norvegicus clone CH230-377L10, WORKING DRA... 46 2.4 1
(AC128025) Rattus norvegicus clone CH230-124G14, *** SEQUENC... 46 2.4 1
(AC127899) Homo sapiens clone RP11-414K16, *** SEQUENCING IN... 46 2.4 1
(AC127219) Rattus norvegicus clone CH230-7L21, WORKING DRAFT... 46 2.4 1
(AC127099) Rattus norvegicus clone CH230-187H16, *** SEQUENC... 46 2.4 1
(AC127081) Rattus norvegicus clone CH230-195P22, WORKING DRA... 46 2.4 1
(AC127040) Rattus norvegicus clone CH230-194D4, *** SEQUENCI... 46 2.4 1
(AC126989) Rattus norvegicus clone CH230-185L18, WORKING DRA... 46 2.4 1
(AC126882) Rattus norvegicus clone CH230-18J16, WORKING DRAF... 46 2.4 1
(AC126472) Homo sapiens clone RP11-677L3, *** SEQUENCING IN ... 46 2.4 1
(AC125651) Rattus norvegicus clone CH230-212F4, *** SEQUENCI... 46 2.4 1
(AC125338) Rattus norvegicus clone CH230-6I20, WORKING DRAFT... 46 2.4 1
(AC123430) Rattus norvegicus clone CH230-423C10, WORKING DRA... 46 2.4 1
(AC122973) Rattus norvegicus clone CH230-31N8, WORKING DRAFT... 46 2.4 1
(AC122665) Rattus norvegicus clone CH230-225M15, WORKING DRA... 46 2.4 1
(AC122097) Rattus norvegicus clone CH230-108A24, WORKING DRA... 46 2.4 1
(AC121432) Rattus norvegicus clone CH230-195D9, *** SEQUENCI... 46 2.4 1
(AC121413) Rattus norvegicus clone CH230-436G8, WORKING DRAF... 46 2.4 1
(AC121019) Rattus norvegicus clone CH230-218F12, WORKING DRA... 46 2.4 1
(AC120729) Rattus norvegicus clone CH230-214O10, WORKING DRA... 46 2.4 1
(AC120079) Rattus norvegicus clone CH230-169C15, WORKING DRA... 46 2.4 1
(AC119550) Rattus norvegicus clone CH230-67E6, *** SEQUENCIN... 46 2.4 1
(AC119117) Rattus norvegicus clone CH230-104F11, *** SEQUENC... 46 2.4 1
(AC118876) Rattus norvegicus clone CH230-494P6, WORKING DRAF... 46 2.4 1
(AC118821) Rattus norvegicus clone CH230-429D19, *** SEQUENC... 46 2.4 1
(AC118364) Rattus norvegicus clone CH230-325H3, *** SEQUENCI... 46 2.4 1
(AC118362) Rattus norvegicus clone CH230-231O7, *** SEQUENCI... 46 2.4 1
(AC117916) Rattus norvegicus clone CH230-148E6, WORKING DRAF... 46 2.4 1
(AC115960) Mus musculus clone RP24-65L12, WORKING DRAFT SEQU... 46 2.4 1
(AC114716) Rattus norvegicus clone CH230-400P7, WORKING DRAF... 46 2.4 1
(AC114711) Rattus norvegicus clone CH230-177M19, *** SEQUENC... 46 2.4 1
(AC114362) Rattus norvegicus clone CH230-325M6, WORKING DRAF... 46 2.4 1
(AC112464) Rattus norvegicus clone CH230-130L16, *** SEQUENC... 46 2.4 1
(AC112433) Rattus norvegicus clone CH230-37H24, *** SEQUENCI... 46 2.4 1
(AC111932) Rattus norvegicus clone CH230-154O2, WORKING DRAF... 46 2.4 1
(AC111916) Rattus norvegicus clone CH230-235G5, WORKING DRAF... 46 2.4 1
(AC111846) Rattus norvegicus clone CH230-277G14, WORKING DRA... 46 2.4 1
(AC111816) Rattus norvegicus clone CH230-46B20, *** SEQUENCI... 46 2.4 1
(AC111739) Rattus norvegicus clone CH230-65C22, *** SEQUENCI... 46 2.4 1
(AC111691) Rattus norvegicus clone CH230-68I7, WORKING DRAFT... 46 2.4 1
(AC111441) Rattus norvegicus clone CH230-187I17, WORKING DRA... 46 2.4 1
(AC110655) Rattus norvegicus clone CH230-140D22, WORKING DRA... 46 2.4 1
(AC110475) Rattus norvegicus clone CH230-24N15, *** SEQUENCI... 46 2.4 1
(AC110347) Rattus norvegicus clone CH230-64P11, WORKING DRAF... 46 2.4 1
(AC109887) Rattus norvegicus clone CH230-312G3, *** SEQUENCI... 46 2.4 1
(AC109871) Rattus norvegicus clone CH230-296H17, WORKING DRA... 46 2.4 1
(AC109688) Rattus norvegicus clone CH230-251F5, WORKING DRAF... 46 2.4 1
(AC109101) Rattus norvegicus clone CH230-290L5, *** SEQUENCI... 46 2.4 1
(AC108955) Rattus norvegicus clone CH230-6F10, *** SEQUENCIN... 46 2.4 1
(AC108238) Rattus norvegicus clone CH230-126G9, *** SEQUENCI... 46 2.4 1
(AC107150) Rattus norvegicus clone CH230-26K20, *** SEQUENCI... 46 2.4 1
(AC106587) Rattus norvegicus clone CH230-206F12, *** SEQUENC... 46 2.4 1
(AC106273) Rattus norvegicus clone CH230-235C9, WORKING DRAF... 46 2.4 1
(AC106084) Rattus norvegicus clone CH230-121C20, *** SEQUENC... 46 2.4 1
(AC105839) Rattus norvegicus clone CH230-45O19, *** SEQUENCI... 46 2.4 1
(AC105477) Rattus norvegicus clone CH230-203K10, *** SEQUENC... 46 2.4 1
(AC103295) Rattus norvegicus clone CH230-134K10, *** SEQUENC... 46 2.4 1
(AC103204) Rattus norvegicus clone CH230-29D3, WORKING DRAFT... 46 2.4 1
(AC103058) Rattus norvegicus clone CH230-162K12, WORKING DRA... 46 2.4 1
(AC103052) Rattus norvegicus clone CH230-147P15, WORKING DRA... 46 2.4 1
(AC099426) Rattus norvegicus clone CH230-209O11, WORKING DRA... 46 2.4 1
(AC098506) Rattus norvegicus clone CH230-64B13, *** SEQUENCI... 46 2.4 1
(AC098029) Rattus norvegicus clone CH230-87D10, WORKING DRAF... 46 2.4 1
(AC097693) Rattus norvegicus clone CH230-80N14, *** SEQUENCI... 46 2.4 1
(AC097411) Rattus norvegicus clone CH230-142N16, WORKING DRA... 46 2.4 1
(AC097198) Rattus norvegicus clone CH230-212P14, *** SEQUENC... 46 2.4 1
(AC096936) Rattus norvegicus clone CH230-41H3, WORKING DRAFT... 46 2.4 1
(AC096529) Rattus norvegicus clone CH230-128D22, WORKING DRA... 46 2.4 1
(AC096448) Rattus norvegicus clone CH230-129E12, WORKING DRA... 46 2.4 1
(AC096371) Rattus norvegicus chromosome 18 clone CH230-15B19... 46 2.4 1
(AC096177) Rattus norvegicus clone CH230-11D4, *** SEQUENCIN... 46 2.4 1
(AC095779) Rattus norvegicus clone CH230-9E5, *** SEQUENCING... 46 2.4 1
(AC095591) Rattus norvegicus clone CH230-8I20, WORKING DRAFT... 46 2.4 1
(AC095421) Rattus norvegicus clone CH230-7C16, *** SEQUENCIN... 46 2.4 1
(AC095221) Rattus norvegicus clone CH230-9M7, *** SEQUENCING... 46 2.4 1
(AC095216) Rattus norvegicus clone CH230-9L11, *** SEQUENCIN... 46 2.4 1
(AC094737) Rattus norvegicus clone CH230-5F11, WORKING DRAFT... 46 2.4 1
(AC094542) Rattus norvegicus clone CH230-4I16, WORKING DRAFT... 46 2.4 1
(FP102979) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.4 1
(FP102842) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.4 1
(FP015865) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.4 1
(CU915394) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.4 1
(AC094461) Rattus norvegicus clone CH230-3O21, WORKING DRAFT... 46 2.4 1
(AC094366) Rattus norvegicus clone CH230-3F15, *** SEQUENCIN... 46 2.4 1
(AC094176) Rattus norvegicus clone CH230-2P4, WORKING DRAFT ... 46 2.4 1
(AC094072) Rattus norvegicus clone CH230-108C17, WORKING DRA... 46 2.4 1
(AC093667) Homo sapiens chromosome UNK clone RP11-493P12, **... 46 2.4 1
(AC091351) Rattus norvegicus clone CH230-1B17, WORKING DRAFT... 46 2.4 1
(AC074149) Mus musculus clone RP23-114M1, WORKING DRAFT SEQU... 46 2.4 1
(AC074146) Mus musculus clone RP23-107G3, WORKING DRAFT SEQU... 46 2.4 1
(AC068796) Homo sapiens chromosome 12 clone RP11-28A18, WORK... 46 2.4 1
(AC034178) Homo sapiens chromosome 12 clone RP11-791L7, WORK... 46 2.4 1
(AC026668) Homo sapiens chromosome 1 clone RP11-659F6, WORKI... 46 2.4 1
(AC026332) Homo sapiens chromosome 12 clone RP11-131H7, WORK... 46 2.4 1
(CT737249) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.4 1
(CR854901) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 2.4 1
(BX649519) Human DNA sequence *** SEQUENCING IN PROGRESS ***... 46 2.4 1
(AC234640) Homo sapiens chromosome UNKNOWN clone ABC7-406480... 46 2.4 1
(AC232473) Brassica rapa subsp. pekinensis clone KBrB027F23,... 46 2.4 1
(AC230132) Bos taurus clone CH240-521A12, WORKING DRAFT SEQU... 46 2.4 1
(AC222423) Bos taurus clone CH240-417N13, WORKING DRAFT SEQU... 46 2.4 1
(AC207299) Homo sapiens chromosome 17 clone ABC9-45392900D8,... 46 2.4 1
(AC206524) Zea mays chromosome 3 clone CH201-121G24; ZMMBBc0... 46 2.4 1
(AC201648) Strongylocentrotus purpuratus clone R3-15K1, WORK... 46 2.4 1
(AC201632) Strongylocentrotus purpuratus clone R3-14D12, WOR... 46 2.4 1
(AC201568) Strongylocentrotus purpuratus clone R3-4003M23, W... 46 2.4 1
(AC201430) Strongylocentrotus purpuratus clone R3-28N9, WORK... 46 2.4 1
(AC201294) Strongylocentrotus purpuratus clone R3-16G8, WORK... 46 2.4 1
(AC201253) Strongylocentrotus purpuratus clone R3-15N4, WORK... 46 2.4 1

>(AU039032) Dictyostelium discoideum slug cDNA, clone SSM302.
Length = 594

Score = 533 bits (269), Expect(3) = 0.0
Identities = 269/269 (100%)
Strand = Plus / Plus


Query: 414 caacattatttgaaatacctggaccaaaaccaattaaagatcaaattcaaataattttac 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 caacattatttgaaatacctggaccaaaaccaattaaagatcaaattcaaataattttac 168


Query: 474 gtgtagatattaaaacaataatgaaaagaatatttgatgcagttggtttaacaaataatg 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 gtgtagatattaaaacaataatgaaaagaatatttgatgcagttggtttaacaaataatg 228


Query: 534 tttcaccattaattcaacaacaacaattggttacaattggtaatacaattacacccgctc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 tttcaccattaattcaacaacaacaattggttacaattggtaatacaattacacccgctc 288


Query: 594 aacaagaacttgataagttatttgcttgtttaggtattaaaactgatcatttcaatttta 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 aacaagaacttgataagttatttgcttgtttaggtattaaaactgatcatttcaatttta 348


Query: 654 attcaccaataccttcaaattctgatgag 682
|||||||||||||||||||||||||||||
Sbjct: 349 attcaccaataccttcaaattctgatgag 377

Score = 145 bits (73), Expect(3) = 0.0
Identities = 73/73 (100%)
Strand = Plus / Plus


Query: 732 cactcttttcaagatcacttttggaatatattgatcatcaaaatcaatatcaatcaaatt 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 cactcttttcaagatcacttttggaatatattgatcatcaaaatcaatatcaatcaaatt 486


Query: 792 ctccagattatga 804
|||||||||||||
Sbjct: 487 ctccagattatga 499

Score = 71.9 bits (36), Expect(3) = 0.0
Identities = 36/36 (100%)
Strand = Plus / Plus


Query: 306 tatcaccatcatcatcatcaactccaccatcaccac 341
||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatcaccatcatcatcatcaactccaccatcaccac 36

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 932,637,055
Number of extensions: 63562639
Number of successful extensions: 6545886
Number of sequences better than 10.0: 1228
Length of query: 909
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 885
Effective length of database: 99,340,224,878
Effective search space: 87916099017030
Effective search space used: 87916099017030
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.18
Homology vs Protein
Query= Contig-U01996-1 (Contig-U01996-1Q) /CSM_Contig/Contig-U01996-1Q.Seq.d
(909 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AP007172_41(AP007172|pid:none) Aspergillus oryzae RIB40 genomic ... 53 1e-05
(Q8TF66) RecName: Full=Leucine-rich repeat-containing protein 15... 52 2e-05
BC101064_1(BC101064|pid:none) Homo sapiens leucine rich repeat c... 52 2e-05
AX647053_1(AX647053|pid:none) Sequence 1245 from Patent EP1270724. 52 2e-05
AK125112_1(AK125112|pid:none) Homo sapiens cDNA FLJ43122 fis, cl... 52 2e-05
(Q6UXM1) RecName: Full=Leucine-rich repeats and immunoglobulin-l... 51 5e-05
AK301162_1(AK301162|pid:none) Homo sapiens cDNA FLJ57615 complet... 51 5e-05
AK292857_1(AK292857|pid:none) Homo sapiens cDNA FLJ76477 complet... 51 5e-05
AY964853_1(AY964853|pid:none) Eptatretus stoutii clone Es4VLRA.8... 47 9e-04
(Q8R5M3) RecName: Full=Leucine-rich repeat-containing protein 15... 46 0.002
BX908798_38(BX908798|pid:none) Parachlamydia-related symbiont UW... 46 0.002
T23841(T23841) hypothetical protein M88.6b - Caenorhabditis eleg... 46 0.002
AB263748_1(AB263748|pid:none) Ipomoea trifida DNA, self-incompat... 46 0.002
T23836(T23836) hypothetical protein M88.6a - Caenorhabditis eleg... 46 0.002
AY297043_1(AY297043|pid:none) Bos taurus toll-like receptor 4 (T... 45 0.003
CP001344_1836(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 45 0.003
A45237_1(A45237|pid:none) Sequence 1 from Patent WO9518230. &A5... 45 0.003
EF562452_1(EF562452|pid:none) Bubalus bubalis TLR4 variant 2 mRN... 45 0.003
T15864(T15864)hypothetical protein C56E6.6 - Caenorhabditis eleg... 45 0.003
AY964746_1(AY964746|pid:none) Eptatretus burgeri clone Eb7VLRA.3... 45 0.003
EF710653_18(EF710653|pid:none) Glyptapanteles indiensis clone BA... 45 0.003
CR380950_97(CR380950|pid:none) Candida glabrata strain CBS138 ch... 45 0.003
AY994163_1(AY994163|pid:none) Bison bison toll-like receptor 4 (... 45 0.003
DQ839566_1(DQ839566|pid:none) Bos taurus toll-like receptor 4 (T... 45 0.003
EU386358_1(EU386358|pid:none) Bubalus bubalis toll-like receptor... 45 0.003
EF562451_1(EF562451|pid:none) Bubalus bubalis TLR4 variant 1 mRN... 45 0.003
AY297040_1(AY297040|pid:none) Bos taurus toll-like receptor 4 (T... 45 0.003
AB056444_1(AB056444|pid:none) Bos taurus TLR4 mRNA for Toll-like... 45 0.003
AK017350_1(AK017350|pid:none) Mus musculus 6 days neonate head c... 45 0.003
EF710646_9(EF710646|pid:none) Glyptapanteles flavicoxis clone BA... 45 0.003
AF053994_1(AF053994|pid:none) Lycopersicon esculentum Hcr2-0A (H... 45 0.003
BC095674_1(BC095674|pid:none) Danio rerio leucine-rich repeat, i... 45 0.003
CU468741_1(CU468741|pid:none) Danio rerio cDNA, clone cssl:d0313. 45 0.003
AF053996_1(AF053996|pid:none) Lycopersicon pimpinellifolium Hcr2... 45 0.003
AY634618_1(AY634618|pid:none) Lycopersicon peruvianum peru 1 gen... 45 0.003
(Q6P1C6) RecName: Full=Leucine-rich repeats and immunoglobulin-l... 45 0.003
AY964862_1(AY964862|pid:none) Eptatretus stoutii clone Es4VLRA.E... 45 0.004
AK112081_1(AK112081|pid:none) Oryza sativa Japonica Group cDNA c... 45 0.004
BT016030_1(BT016030|pid:none) Drosophila melanogaster RE07536 fu... 45 0.004
AY060678_1(AY060678|pid:none) Drosophila melanogaster GH11496 fu... 45 0.004
AE014297_717(AE014297|pid:none) Drosophila melanogaster chromoso... 45 0.004
EF609240_2(EF609240|pid:none) Bubalus bubalis TLR4 gene, partial... 45 0.004
DQ922636_1(DQ922636|pid:none) Ovis aries Toll-like receptor 4 mR... 45 0.004
AL662985_6(AL662985|pid:none) Oryza sativa genomic DNA, chromoso... 45 0.004
DQ922635_1(DQ922635|pid:none) Capra hircus Toll-like receptor 4 ... 45 0.004
U29380_11(U29380|pid:none) Caenorhabditis elegans cosmid ZK546, ... 44 0.008
(P58681) RecName: Full=Toll-like receptor 7; Flags: Precursor; ... 44 0.008
FJ915487_1(FJ915487|pid:none) Gallus gallus isolate 207 TLR4 gen... 44 0.008
U29380_12(U29380|pid:none) Caenorhabditis elegans cosmid ZK546, ... 44 0.008
T27905(T27905) hypothetical protein ZK546.2 - Caenorhabditis ele... 44 0.008
T27904(T27904)hypothetical protein ZK546.2b - Caenorhabditis ele... 44 0.008
AY634617_1(AY634617|pid:none) Lycopersicon hirsutum cultivar LA1... 44 0.008
AF119040_4(AF119040|pid:none) Lycopersicon esculentum haplotype ... 44 0.010
AY058153_1(AY058153|pid:none) Arabidopsis thaliana At2g31880/F20... 44 0.010
AY964920_1(AY964920|pid:none) Eptatretus stoutii clone Es6VLRA.B... 44 0.010
BT021726_1(BT021726|pid:none) Bos taurus hypothetical protein FL... 44 0.010
AM431594_1(AM431594|pid:none) Vitis vinifera contig VV78X160416.... 44 0.010
AP003708_29(AP003708|pid:none) Oryza sativa Japonica Group genom... 44 0.010
BT056929_1(BT056929|pid:none) Salmo salar clone ssal-evf-509-335... 44 0.010
AM485217_1(AM485217|pid:none) Vitis vinifera contig VV78X273769.... 44 0.010
AC006200_8(AC006200|pid:none) Arabidopsis thaliana chromosome 2 ... 43 0.013
AK111694_1(AK111694|pid:none) Oryza sativa Japonica Group cDNA c... 43 0.013
AP008216_747(AP008216|pid:none) Oryza sativa (japonica cultivar-... 43 0.013
AE017350_264(AE017350|pid:none) Cryptococcus neoformans var. neo... 43 0.013
DQ220665_1(DQ220665|pid:none) Arabidopsis thaliana ecotype Fm15 ... 43 0.013
AC006533_10(AC006533|pid:none) Arabidopsis thaliana chromosome 2... 43 0.013
AJ002235_3(AJ002235|pid:none) Lycopersicon hirsutum Cf-4 resista... 43 0.017
AM981302_1(AM981302|pid:none) Ovis aries mRNA for Toll-like rece... 43 0.017
AF401036_1(AF401036|pid:none) Lycopersicon pimpinellifolium rece... 43 0.017
(Q1ZXD6) RecName: Full=Probable serine/threonine-protein kinase ... 43 0.017
AL049483_16(AL049483|pid:none) Arabidopsis thaliana DNA chromoso... 43 0.017
CP001332_194(CP001332|pid:none) Micromonas sp. RCC299 chromosome... 43 0.017
(Q5PP26) RecName: Full=Piriformospora indica-insensitive protein... 42 0.022
FJ915509_1(FJ915509|pid:none) Gallus gallus isolate 321 TLR4 gen... 42 0.022
AF503433_8(AF503433|pid:none) Sorghum bicolor BAC 170F8, complet... 42 0.022
FJ915503_1(FJ915503|pid:none) Gallus varius isolate 169 TLR4 gen... 42 0.022
FJ915499_1(FJ915499|pid:none) Gallus gallus isolate 359 TLR4 gen... 42 0.022
FJ915496_1(FJ915496|pid:none) Gallus gallus isolate 739 TLR4 gen... 42 0.022
(Q9UK78) RecName: Full=Toll-like receptor 4; AltName: Full=hToll... 42 0.022
AB445640_1(AB445640|pid:none) Pan paniscus TLR4 mRNA for toll-li... 42 0.022
AM427881_2(AM427881|pid:none) Vitis vinifera contig VV78X246409.... 42 0.022
AB445641_1(AB445641|pid:none) Gorilla gorilla TLR4 mRNA for toll... 42 0.022
AF177766_1(AF177766|pid:none) Homo sapiens human toll-like recep... 42 0.022
FJ915525_1(FJ915525|pid:none) Gallus gallus isolate 511 TLR4 gen... 42 0.022
(Q8N9N7) RecName: Full=Leucine-rich repeat-containing protein 57... 42 0.022
FJ915483_1(FJ915483|pid:none) Gallus lafayetii isolate 150 TLR4 ... 42 0.022
AJ550162_1(AJ550162|pid:none) Arabidopsis thaliana mRNA for LRR ... 42 0.022
BX538324_1(BX538324|pid:none) Homo sapiens mRNA; cDNA DKFZp686P1... 42 0.022
FJ915505_1(FJ915505|pid:none) Gallus sonneratii isolate 530 TLR4... 42 0.022
AX399032_1(AX399032|pid:none) Sequence 25 from Patent WO0190151.... 42 0.022
(Q2V898) RecName: Full=Toll-like receptor 4; AltName: CD_antigen... 42 0.022
FJ915482_1(FJ915482|pid:none) Gallus lafayetii isolate 93 TLR4 g... 42 0.022
AL160272_2(AL160272|pid:none) Human DNA sequence from clone RP11... 42 0.022
(Q8SPE8) RecName: Full=Toll-like receptor 4; AltName: CD_antigen... 42 0.022
FJ915484_1(FJ915484|pid:none) Gallus lafayetii isolate 606 TLR4 ... 42 0.022
AK290053_1(AK290053|pid:none) Homo sapiens cDNA FLJ77030 complet... 42 0.022
FJ915485_1(FJ915485|pid:none) Gallus gallus isolate 188 TLR4 gen... 42 0.022
BC154066_1(BC154066|pid:none) Xenopus tropicalis hypothetical pr... 42 0.022
AK303730_1(AK303730|pid:none) Homo sapiens cDNA FLJ61030 complet... 42 0.022
FJ915506_1(FJ915506|pid:none) Gallus sonneratii isolate 74 TLR4 ... 42 0.022
FJ915489_1(FJ915489|pid:none) Gallus gallus isolate 226 TLR4 gen... 42 0.022
AY814526_1(AY814526|pid:none) Schistosoma japonicum SJCHGC08153 ... 42 0.029
BT064200_1(BT064200|pid:none) Zea mays full-length cDNA clone ZM... 42 0.029
AE014297_2427(AE014297|pid:none) Drosophila melanogaster chromos... 42 0.029
CP001330_603(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 42 0.029
EF583903_1(EF583903|pid:none) Sus scrofa toll-like receptor 8 (T... 42 0.029
AY101394_1(AY101394|pid:none) Oryctolagus cuniculus toll-like re... 42 0.029
AB092975_1(AB092975|pid:none) Sus scrofa TLR8 mRNA for Toll-like... 42 0.029
EU955660_1(EU955660|pid:none) Zea mays clone 1541282 unknown mRN... 42 0.029
AB291813_2(AB291813|pid:none) Sus scrofa TLR7, TLR8, TMSB4X gene... 42 0.029
AE014134_2534(AE014134|pid:none) Drosophila melanogaster chromos... 42 0.029
CP000058_2113(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 42 0.029
AY964931_1(AY964931|pid:none) Eptatretus stoutii clone Es6VLRA.H... 42 0.037
BC146061_1(BC146061|pid:none) Bos taurus leucine rich repeat tra... 42 0.037
AY937243_1(AY937243|pid:none) Apis mellifera Toll-like receptor ... 42 0.037
AL662993_9(AL662993|pid:none) Oryza sativa genomic DNA, chromoso... 42 0.037
AK291064_1(AK291064|pid:none) Homo sapiens cDNA FLJ76283 complet... 42 0.037
EF623823_1(EF623823|pid:none) Nicotiana tabacum brassinosteroid ... 42 0.037
AC120509_9(AC120509|pid:none) Oryza sativa chromosome 3 BAC OSJN... 42 0.037
EF094713_1(EF094713|pid:none) Petromyzon marinus isolate PmVLRA.... 42 0.037
DQ286568_1(DQ286568|pid:none) Triticum aestivum leucine-rich rep... 42 0.037
AP008212_483(AP008212|pid:none) Oryza sativa (japonica cultivar-... 42 0.037
BT087837_1(BT087837|pid:none) Zea mays full-length cDNA clone ZM... 42 0.037
DQ286567_1(DQ286567|pid:none) Triticum aestivum leucine-rich rep... 42 0.037
CR855058_4(CR855058|pid:none) Oryza sativa (indica cultivar-grou... 42 0.037
AK122278_1(AK122278|pid:none) Mus musculus mRNA for mKIAA0416 pr... 42 0.037
AJ002236_6(AJ002236|pid:none) Lycopersicon pimpinellifolium Cf-9... 42 0.037
AJ002235_4(AJ002235|pid:none) Lycopersicon hirsutum Cf-4 resista... 42 0.037
AK046774_1(AK046774|pid:none) Mus musculus 10 days neonate medul... 42 0.037
AX647057_1(AX647057|pid:none) Sequence 1249 from Patent EP127072... 42 0.037
DQ400125_1(DQ400125|pid:none) Branchiostoma belcheri toll-like r... 42 0.037
AC151804_7(AC151804|pid:none) Solanum demissum chromosome 5 clon... 42 0.037
AM466362_4(AM466362|pid:none) Vitis vinifera contig VV78X266640.... 42 0.037
AP003278_19(AP003278|pid:none) Oryza sativa Japonica Group genom... 42 0.037
AF151684_1(AF151684|pid:none) Drosophila virilis gp150 (gp150) g... 41 0.049
FJ266021_5(FJ266021|pid:none) Oryza brachyantha clone OB__Ba045I... 41 0.049
AF053993_1(AF053993|pid:none) Lycopersicon esculentum disease re... 41 0.049
AK061732_1(AK061732|pid:none) Oryza sativa Japonica Group cDNA c... 41 0.049
AY793356_1(AY793356|pid:none) Lycopersicon pimpinellifolium Hcr2... 41 0.049
AY793354_1(AY793354|pid:none) Lycopersicon pimpinellifolium Hcr2... 41 0.049
AF053998_1(AF053998|pid:none) Lycopersicon esculentum Hcr2-5D (H... 41 0.049
CP001576_117(CP001576|pid:none) Micromonas sp. RCC299 chromosome... 41 0.049
(Q5FVI3) RecName: Full=Leucine-rich repeat-containing protein 57... 41 0.049
EU049848_1(EU049848|pid:none) Solanum tuberosum LRR receptor-lik... 41 0.049
AF119040_3(AF119040|pid:none) Lycopersicon esculentum haplotype ... 41 0.049
AJ507093_1(AJ507093|pid:none) Hordeum vulgare mRNA for NBS-LRR d... 41 0.049
EF094704_1(EF094704|pid:none) Petromyzon marinus isolate PmVLRA.... 41 0.049
AC152068_9(AC152068|pid:none) Medicago truncatula clone mth2-29p... 41 0.064
AC122160_4(AC122160|pid:none) Medicago truncatula clone mth2-23d... 41 0.064
AJ303349_4(AJ303349|pid:none) Capsella rubella ORF1, ORF2, ORF3,... 41 0.064
CU638773_1(CU638773|pid:none) Danio rerio cDNA, clone cssl:d0643. 41 0.064
BC095148_1(BC095148|pid:none) Danio rerio zgc:136337, mRNA (cDNA... 41 0.064
AJ002236_5(AJ002236|pid:none) Lycopersicon pimpinellifolium Cf-9... 41 0.064
EU961061_1(EU961061|pid:none) Zea mays clone 232554 unknown mRNA. 41 0.064
U77888_2(U77888|pid:none) Ipomoea nil receptor-like protein kina... 41 0.064
AP004776_13(AP004776|pid:none) Oryza sativa Japonica Group genom... 41 0.064
AB445642_1(AB445642|pid:none) Pongo pygmaeus TLR4 mRNA for toll-... 41 0.064
EF094705_1(EF094705|pid:none) Petromyzon marinus isolate PmVLRA.... 41 0.064
AE014134_2991(AE014134|pid:none) Drosophila melanogaster chromos... 41 0.064
AY632360_8(AY632360|pid:none) Gossypium hirsutum BAC 106I22, com... 41 0.064
AK067635_1(AK067635|pid:none) Oryza sativa Japonica Group cDNA c... 41 0.064
AK292248_1(AK292248|pid:none) Homo sapiens cDNA FLJ77590 complet... 41 0.064
AJ002237_2(AJ002237|pid:none) Lycopersicon esculentum haplotype ... 41 0.064
(Q9BTT6) RecName: Full=Leucine-rich repeat-containing protein 1;... 41 0.064
AY632359_8(AY632359|pid:none) Gossypium hirsutum BAC 155C17, com... 40 0.083
AY793348_1(AY793348|pid:none) Lycopersicon pimpinellifolium Cf-2... 40 0.083
A57130_1(A57130|pid:none) Sequence 1 from Patent WO9531564. &AY... 40 0.083
AY793349_1(AY793349|pid:none) Lycopersicon pimpinellifolium Cf-2... 40 0.083
AC126784_3(AC126784|pid:none) Medicago truncatula clone mth2-36b... 40 0.083
CU633895_115(CU633895|pid:none) Podospora anserina genomic DNA c... 40 0.083
CR855156_1(CR855156|pid:none) Oryza sativa genomic DNA, chromoso... 40 0.083
AM454437_3(AM454437|pid:none) Vitis vinifera contig VV78X246947.... 40 0.083
EU626444_5(EU626444|pid:none) Gossypium arboreum clone BAC 271C2... 40 0.083
(Q9C8T9) RecName: Full=Putative disease resistance protein At1g6... 40 0.083
AB097825_1(AB097825|pid:none) Danio rerio YF-296 mRNA for hypoth... 40 0.083
AL606595_1(AL606595|pid:none) Oryza sativa genomic DNA, chromoso... 40 0.083
AP008207_3602(AP008207|pid:none) Oryza sativa (japonica cultivar... 40 0.083
AK069976_1(AK069976|pid:none) Oryza sativa Japonica Group cDNA c... 40 0.083
CP001344_1827(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 40 0.083
AB169474_1(AB169474|pid:none) Macaca fascicularis testis cDNA, c... 40 0.083
EF094714_1(EF094714|pid:none) Petromyzon marinus isolate PmVLRA.... 40 0.083
CU468762_1(CU468762|pid:none) Danio rerio cDNA, clone cssl:d0335. 40 0.11
BC076103_1(BC076103|pid:none) Danio rerio reticulon 4 receptor, ... 40 0.11
AC125479_18(AC125479|pid:none) Medicago truncatula clone mth2-7f... 40 0.11
AM269961_4(AM269961|pid:none) Aspergillus niger contig An01c0140... 40 0.11
FJ446580_5(FJ446580|pid:none) Arabidopsis thaliana disease resis... 40 0.11
AL731735_4(AL731735|pid:none) Mouse DNA sequence from clone RP23... 40 0.11
AY964868_1(AY964868|pid:none) Eptatretus stoutii clone Es5VLRA.1... 40 0.11
AP008208_791(AP008208|pid:none) Oryza sativa (japonica cultivar-... 40 0.11
EU626443_11(EU626443|pid:none) Gossypioides kirkii clone BAC 096... 40 0.11
CR760802_1(CR760802|pid:none) Xenopus tropicalis finished cDNA, ... 40 0.11
AY864734_1(AY864734|pid:none) Macaca mulatta Toll-like receptor ... 40 0.11
AC136971_9(AC136971|pid:none) Oryza sativa (japonica cultivar-gr... 40 0.11
AB445643_1(AB445643|pid:none) Macaca fascicularis TLR4 mRNA for ... 40 0.11
AK111823_1(AK111823|pid:none) Oryza sativa Japonica Group cDNA c... 40 0.11
AB167412_1(AB167412|pid:none) Tursiops truncatus TLR4 mRNA for t... 40 0.11
AY964842_1(AY964842|pid:none) Eptatretus stoutii clone Es2VLRA.2... 40 0.11
EU204936_1(EU204936|pid:none) Macaca mulatta Toll-like receptor ... 40 0.11
EU626442_14(EU626442|pid:none) Gossypium raimondii clone BAC 031... 40 0.11
AC144729_4(AC144729|pid:none) Medicago truncatula clone mth2-15j... 40 0.14
AF053995_1(AF053995|pid:none) Lycopersicon esculentum Hcr2-0B (H... 40 0.14
AE014134_274(AE014134|pid:none) Drosophila melanogaster chromoso... 40 0.14
DQ488357_1(DQ488357|pid:none) Sus scrofa isolate UK-HA20 toll-li... 40 0.14
DQ488286_1(DQ488286|pid:none) Sus scrofa isolate I-CAL5 toll-lik... 40 0.14
AL772299_9(AL772299|pid:none) Mouse DNA sequence from clone RP23... 40 0.14
DQ488236_1(DQ488236|pid:none) Sus scrofa isolate I-LW15 toll-lik... 40 0.14
AK003037_1(AK003037|pid:none) Mus musculus adult male brain cDNA... 40 0.14
DQ437870_1(DQ437870|pid:none) Toxoplasma gondii leucine-rich rep... 40 0.14
AK134971_1(AK134971|pid:none) Mus musculus adult male olfactory ... 40 0.14
DQ488222_1(DQ488222|pid:none) Sus scrofa isolate I-LW1 toll-like... 40 0.14
DQ488233_1(DQ488233|pid:none) Sus scrofa isolate I-LW12 toll-lik... 40 0.14
CU468747_1(CU468747|pid:none) Danio rerio cDNA, clone cssl:d0320. 40 0.14
FJ555287_1(FJ555287|pid:none) Sus scrofa breed Lanyu toll-like r... 40 0.14
FJ829745_1(FJ829745|pid:none) Avena strigosa clone III2.18-32 pu... 40 0.14
DQ488300_1(DQ488300|pid:none) Sus scrofa isolate I-CAS4 toll-lik... 40 0.14
BC092942_1(BC092942|pid:none) Danio rerio epiphycan, mRNA (cDNA ... 40 0.14
AY793350_1(AY793350|pid:none) Lycopersicon pimpinellifolium Hcr2... 40 0.14
DQ488274_1(DQ488274|pid:none) Sus scrofa isolate I-DU13 toll-lik... 40 0.14
(Q68Y56) RecName: Full=Toll-like receptor 4; AltName: CD_antigen... 40 0.14
DQ488350_1(DQ488350|pid:none) Sus scrofa isolate UK-HA13 toll-li... 40 0.14
AB078418_1(AB078418|pid:none) Sus scrofa TLR4 mRNA for Toll-like... 40 0.14
BC133975_1(BC133975|pid:none) Danio rerio epiphycan, mRNA (cDNA ... 40 0.14
EU716413_1(EU716413|pid:none) Sus scrofa toll-like receptor 4 (T... 40 0.14
DQ488234_1(DQ488234|pid:none) Sus scrofa isolate I-LW13 toll-lik... 40 0.14
BC077882_1(BC077882|pid:none) Xenopus laevis glycoprotein 5 (pla... 40 0.14
DQ488337_1(DQ488337|pid:none) Sus scrofa isolate ME497 toll-like... 40 0.14
Z79598_2(Z79598|pid:none) Caenorhabditis elegans Cosmid C44H4, c... 40 0.14
DQ488351_1(DQ488351|pid:none) Sus scrofa isolate UK-HA14 toll-li... 40 0.14
CU468782_1(CU468782|pid:none) Danio rerio cDNA, clone cssl:d0366. 40 0.14
AK012637_1(AK012637|pid:none) Mus musculus 10, 11 days embryo wh... 40 0.14
(Q9D1G5) RecName: Full=Leucine-rich repeat-containing protein 57... 40 0.14
FJ555286_1(FJ555286|pid:none) Sus scrofa breed Taiwan Black toll... 40 0.14
AJ628065_1(AJ628065|pid:none) Sus scrofa mRNA for toll-like rece... 40 0.14
AY964815_1(AY964815|pid:none) Eptatretus stoutii clone Es1VLRA.2... 40 0.14
DQ488348_1(DQ488348|pid:none) Sus scrofa isolate UK-HA11 toll-li... 40 0.14
DQ488455_1(DQ488455|pid:none) Sus scrofa isolate UK-LW28 toll-li... 40 0.14
DQ488229_1(DQ488229|pid:none) Sus scrofa isolate I-LW8 toll-like... 40 0.14
AY535422_1(AY535422|pid:none) Sus scrofa toll-like receptor 4 mR... 40 0.14
BT053753_1(BT053753|pid:none) Drosophila melanogaster RH27614 fu... 39 0.19
(Q9QUK6) RecName: Full=Toll-like receptor 4; AltName: CD_antigen... 39 0.19
(A4IIK1) RecName: Full=Malignant fibrous histiocytoma-amplified ... 39 0.19
BC029856_1(BC029856|pid:none) Mus musculus toll-like receptor 4,... 39 0.19
AY964740_1(AY964740|pid:none) Eptatretus burgeri clone Eb7VLRA.3... 39 0.19
EF471736_1(EF471736|pid:none) Solanum pimpinellifolium BRI1 prot... 39 0.19
EF094687_1(EF094687|pid:none) Petromyzon marinus isolate PmVLRA.... 39 0.19
AP008209_1393(AP008209|pid:none) Oryza sativa (japonica cultivar... 39 0.19
BX255921_3(BX255921|pid:none) Zebrafish DNA sequence from clone ... 39 0.19
AM462584_1(AM462584|pid:none) Vitis vinifera contig VV78X114808.... 39 0.19
AK220166_1(AK220166|pid:none) Mus musculus mRNA for mKIAA4018 pr... 39 0.19
AP008208_1855(AP008208|pid:none) Oryza sativa (japonica cultivar... 39 0.19
AB104529_1(AB104529|pid:none) Pisum sativum LKA mRNA for brassin... 39 0.19
(Q80VQ1) RecName: Full=Leucine-rich repeat-containing protein 1;... 39 0.19
A29944(A29944;A21123) chaoptin precursor - fruit fly (Drosophila... 39 0.19
EF094748_1(EF094748|pid:none) Petromyzon marinus isolate PmVLRA.... 39 0.19
AK064829_1(AK064829|pid:none) Oryza sativa Japonica Group cDNA c... 39 0.19
AF095353_1(AF095353|pid:none) Mus musculus toll-like receptor 4 ... 39 0.19
AK082721_1(AK082721|pid:none) Mus musculus 0 day neonate cerebel... 39 0.19
(P51886) RecName: Full=Lumican; AltName: Full=Keratan sulfate pr... 39 0.19
T15198(T15198)hypothetical protein F37E3.2 - Caenorhabditis eleg... 39 0.19
AP004097_3(AP004097|pid:none) Oryza sativa Japonica Group genomi... 39 0.19
EF471737_1(EF471737|pid:none) Solanum tuberosum BRI1 protein (BR... 39 0.19
BC081163_1(BC081163|pid:none) Xenopus laevis MGC84276 protein, m... 39 0.19
EU965758_1(EU965758|pid:none) Zea mays clone 288719 protein bind... 39 0.19
FN357312_61(FN357312|pid:none) Schistosoma mansoni genome sequen... 39 0.19
CS441613_1(CS441613|pid:none) Sequence 1 from Patent WO2006050977. 39 0.19
CP000323_2352(CP000323|pid:none) Psychrobacter cryohalolentis K5... 39 0.19
AK154297_1(AK154297|pid:none) Mus musculus NOD-derived CD11c +ve... 39 0.19
(Q8L899) RecName: Full=Systemin receptor SR160; EC=2.7.... 39 0.19
(Q8GUQ5) RecName: Full=Brassinosteroid LRR receptor kinase; ... 39 0.19
(P12024) RecName: Full=Chaoptin; AltName: Full=Photoreceptor cel... 39 0.19
AF003132_2(AF003132|pid:none) Caenorhabditis elegans cosmid F37E... 39 0.19
AC120505_14(AC120505|pid:none) Oryza sativa chromosome 3 BAC OSJ... 39 0.19
AF185285_1(AF185285|pid:none) Mus musculus Toll-like receptor 4 ... 39 0.19
(Q8N456) RecName: Full=Leucine-rich repeat-containing protein 18; 39 0.24
AY358137_1(AY358137|pid:none) Homo sapiens clone DNA193663 VKGE9... 39 0.24
AY663649_1(AY663649|pid:none) Ctenopharyngodon idella glycoprote... 39 0.24
AY663650_1(AY663650|pid:none) Ctenopharyngodon idella glycoprote... 39 0.24
AM451205_2(AM451205|pid:none) Vitis vinifera contig VV78X079796.... 39 0.24
CP001053_140(CP001053|pid:none) Burkholderia phytofirmans PsJN c... 39 0.24
DQ444712_1(DQ444712|pid:none) Bos taurus insulin-like growth fac... 39 0.24
BC163075_1(BC163075|pid:none) Danio rerio toll-like receptor 21,... 39 0.24
(Q9MYW3) RecName: Full=Toll-like receptor 4; AltName: CD_antigen... 39 0.24
AP008208_1819(AP008208|pid:none) Oryza sativa (japonica cultivar... 39 0.24
AM434731_1(AM434731|pid:none) Vitis vinifera contig VV78X204446.... 39 0.24
AY639600_1(AY639600|pid:none) Lycopersicon pimpinellifolium orio... 39 0.24
AP005412_8(AP005412|pid:none) Oryza sativa Japonica Group genomi... 39 0.24
AP004063_2(AP004063|pid:none) Oryza sativa Japonica Group genomi... 39 0.24
EU587382_1(EU587382|pid:none) Mentha x piperita verticillium wil... 39 0.24
AC123570_5(AC123570|pid:none) Medicago truncatula clone mth2-33l... 39 0.24
DQ315790_1(DQ315790|pid:none) Xenopus laevis neuronal leucine-ri... 39 0.24
AJ002236_2(AJ002236|pid:none) Lycopersicon pimpinellifolium Cf-9... 39 0.24
BC117586_1(BC117586|pid:none) Danio rerio zgc:136337, mRNA (cDNA... 39 0.24
CU638787_1(CU638787|pid:none) Danio rerio cDNA, clone cssl:d0663. 39 0.24
EU587378_1(EU587378|pid:none) Mentha longifolia verticillium wil... 39 0.24
FB916355_1(FB916355|pid:none) Sequence 135628 from Patent WO2008... 39 0.24
AJ002235_2(AJ002235|pid:none) Lycopersicon hirsutum Cf-4 resista... 39 0.24
AY813172_1(AY813172|pid:none) Schistosoma japonicum SJCHGC04898 ... 39 0.24
(Q54XZ5) RecName: Full=Probable serine/threonine-protein kinase ... 39 0.24
EU587376_1(EU587376|pid:none) Mentha longifolia verticillium wil... 39 0.24
CP000685_601(CP000685|pid:none) Flavobacterium johnsoniae UW101,... 39 0.24
BC036722_1(BC036722|pid:none) Homo sapiens leucine rich repeat c... 39 0.24
AC079679_1(AC079679|pid:none) Arabidopsis thaliana chromosome 1 ... 39 0.24
AE014298_3321(AE014298|pid:none) Drosophila melanogaster chromos... 39 0.24
A34901(A34901)lysine carboxypeptidase (EC 3.4.17.3) 83K chain - ... 39 0.32
BC079423_1(BC079423|pid:none) Rattus norvegicus leucine rich rep... 39 0.32
AY072078_1(AY072078|pid:none) Arabidopsis thaliana unknown prote... 39 0.32
J05158_1(J05158|pid:none) Homo sapiens carboxypeptidase N precur... 39 0.32
(Q9DE68) RecName: Full=Decorin; AltName: Full=Bone proteoglycan ... 39 0.32
CP000348_1167(CP000348|pid:none) Leptospira borgpetersenii serov... 39 0.32
DQ138914_1(DQ138914|pid:none) Drosophila melanogaster strain Ral... 39 0.32
AC169177_15(AC169177|pid:none) Medicago truncatula chromosome 7 ... 39 0.32
AY964817_1(AY964817|pid:none) Eptatretus stoutii clone Es1VLRA.2... 39 0.32
DQ138918_1(DQ138918|pid:none) Drosophila yakuba strain T33 CG859... 39 0.32
EU967598_1(EU967598|pid:none) Zea mays clone 304715 leucine-rich... 39 0.32
AP004553_15(AP004553|pid:none) Oryza sativa Japonica Group genom... 39 0.32
AP007155_730(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 39 0.32
(P93194) RecName: Full=Receptor-like protein kinase; EC... 39 0.32
(O94294) RecName: Full=Leucine-rich repeat-containing protein so... 39 0.32
BT066945_1(BT066945|pid:none) Zea mays full-length cDNA clone ZM... 39 0.32
AK228948_1(AK228948|pid:none) Arabidopsis thaliana mRNA for hypo... 39 0.32
AY639601_1(AY639601|pid:none) Lycopersicon pimpinellifolium hapl... 39 0.32
AL022141_7(AL022141|pid:none) Arabidopsis thaliana DNA chromosom... 39 0.32
DQ138919_1(DQ138919|pid:none) Drosophila erecta voucher stock #1... 39 0.32
AC174357_18(AC174357|pid:none) Medicago truncatula clone mth2-26... 39 0.32
(Q6GPJ5) RecName: Full=Leucine-rich repeat-containing protein 40... 39 0.32
AL772146_1(AL772146|pid:none) Zebrafish DNA sequence from clone ... 39 0.32
(P49606) RecName: Full=Adenylate cyclase; EC=4.6.1.1; A... 39 0.32
AB028611_1(AB028611|pid:none) Arabidopsis thaliana genomic DNA, ... 39 0.32
DQ138917_1(DQ138917|pid:none) Drosophila yakuba strain Tai18 CG8... 39 0.32
(Q5A761) RecName: Full=Glucose-repressible alcohol dehydrogenase... 39 0.32
AM888284_1(AM888284|pid:none) Sordaria macrospora sac1 gene for ... 39 0.32
AY964923_1(AY964923|pid:none) Eptatretus stoutii clone Es6VLRA.C... 39 0.32
DQ138916_1(DQ138916|pid:none) Drosophila simulans strain Ky-b CG... 39 0.32
EF094737_1(EF094737|pid:none) Petromyzon marinus isolate PmVLRA.... 39 0.32
AJ002235_5(AJ002235|pid:none) Lycopersicon hirsutum Cf-4 resista... 39 0.32
AL033501_13(AL033501|pid:none) C.albicans cosmid Ca41C10. &T182... 39 0.32
BC128650_1(BC128650|pid:none) Xenopus tropicalis hypothetical pr... 39 0.32
AP003948_11(AP003948|pid:none) Oryza sativa Japonica Group genom... 38 0.41
AP008208_694(AP008208|pid:none) Oryza sativa (japonica cultivar-... 38 0.41
BT039083_1(BT039083|pid:none) Zea mays full-length cDNA clone ZM... 38 0.41
DQ138942_1(DQ138942|pid:none) Drosophila yakuba strain T33 CG889... 38 0.41
FJ708644_1(FJ708644|pid:none) Arabidopsis thaliana leucine-rich ... 38 0.41
AF180942_9(AF180942|pid:none) Arabidopsis thaliana RPP5 disease ... 38 0.41
AM430518_2(AM430518|pid:none) Vitis vinifera contig VV78X258102.... 38 0.41
AP008217_977(AP008217|pid:none) Oryza sativa (japonica cultivar-... 38 0.41
AB238229_1(AB238229|pid:none) Xenopus laevis scrp1 mRNA for scri... 38 0.41
AC015446_7(AC015446|pid:none) Arabidopsis thaliana chromosome I ... 38 0.41
AY639600_2(AY639600|pid:none) Lycopersicon pimpinellifolium orio... 38 0.41
DQ864497_1(DQ864497|pid:none) Ctenopharyngodon idella toll-like ... 38 0.41
AP008211_1726(AP008211|pid:none) Oryza sativa (japonica cultivar... 38 0.41
EU962586_1(EU962586|pid:none) Zea mays clone 243998 unknown mRNA. 38 0.41
CP001576_554(CP001576|pid:none) Micromonas sp. RCC299 chromosome... 38 0.41
(Q9CQ07) RecName: Full=Leucine-rich repeat-containing protein 18... 38 0.41
AM439906_1(AM439906|pid:none) Vitis vinifera contig VV78X166661.... 38 0.41
FN317622_1(FN317622|pid:none) Schistosoma japonicum isolate Anhu... 38 0.41
EF094635_1(EF094635|pid:none) Petromyzon marinus isolate PmVLRA.... 38 0.41
EU856774_1(EU856774|pid:none) Phaseolus vulgaris NBS-LRR type pu... 38 0.41
(Q5DU41) RecName: Full=Leucine-rich repeat-containing protein 8B; 38 0.41
EU956267_1(EU956267|pid:none) Zea mays clone 1559853 leucine-ric... 38 0.41
AY793355_1(AY793355|pid:none) Lycopersicon pimpinellifolium Hcr2... 38 0.41
AB012245_18(AB012245|pid:none) Arabidopsis thaliana genomic DNA,... 38 0.41
AB073628_1(AB073628|pid:none) Nicotiana tabacum mRNA for recepto... 38 0.41
DQ866830_1(DQ866830|pid:none) Ctenopharyngodon idella toll-like ... 38 0.41
BC138877_1(BC138877|pid:none) Mus musculus leucine rich repeat c... 38 0.41
(Q6FRT2) RecName: Full=Glucose-repressible alcohol dehydrogenase... 38 0.41
DQ138941_1(DQ138941|pid:none) Drosophila yakuba strain Tai18 CG8... 38 0.41
AY964723_1(AY964723|pid:none) Eptatretus burgeri clone Eb7VLRA.1... 38 0.41
BC163185_1(BC163185|pid:none) Danio rerio toll-like receptor 5b,... 38 0.41
AB016874_3(AB016874|pid:none) Arabidopsis thaliana genomic DNA, ... 38 0.41
EU956771_1(EU956771|pid:none) Zea mays clone 1573266 protein lap... 38 0.41
AM475810_2(AM475810|pid:none) Vitis vinifera contig VV78X212682.... 38 0.41
BC139541_1(BC139541|pid:none) Danio rerio vasorin like, mRNA (cD... 38 0.41
DQ220672_1(DQ220672|pid:none) Arabidopsis lyrata ecotype G11 dis... 38 0.41
AP000366_23(AP000366|pid:none) Oryza sativa Japonica Group genom... 38 0.41
(Q5FW85) RecName: Full=Extracellular matrix protein 2; AltName: ... 38 0.41
AK220329_1(AK220329|pid:none) Mus musculus mRNA for mKIAA0231 pr... 38 0.41
AE014298_1960(AE014298|pid:none) Drosophila melanogaster chromos... 38 0.41
DQ528400_1(DQ528400|pid:none) Arabidopsis thaliana ecotype Br-0 ... 38 0.54
AY054256_1(AY054256|pid:none) Arabidopsis thaliana AT5g67280/K3G... 38 0.54
CU468743_1(CU468743|pid:none) Danio rerio cDNA, clone cssl:d0316. 38 0.54
DQ528427_1(DQ528427|pid:none) Arabidopsis thaliana ecotype LER-1... 38 0.54
AJ871351_1(AJ871351|pid:none) Nyctotherus ovalis partial gene fo... 38 0.54
DQ528401_1(DQ528401|pid:none) Arabidopsis thaliana ecotype Bur-0... 38 0.54
DQ528432_1(DQ528432|pid:none) Arabidopsis thaliana ecotype Mr-0 ... 38 0.54
BC048444_1(BC048444|pid:none) Mus musculus leucine rich repeat c... 38 0.54
AY885771_1(AY885771|pid:none) Oryza longistaminata isolate Xa04 ... 38 0.54
AM444823_1(AM444823|pid:none) Vitis vinifera contig VV78X145206.... 38 0.54
BT061936_1(BT061936|pid:none) Zea mays full-length cDNA clone ZM... 38 0.54
DQ528404_1(DQ528404|pid:none) Arabidopsis thaliana ecotype CIBC-... 38 0.54
DQ528418_1(DQ528418|pid:none) Arabidopsis thaliana ecotype Gu-0 ... 38 0.54
T23395(T23395) hypothetical protein K07A12.2 - Caenorhabditis el... 38 0.54
AM981306_1(AM981306|pid:none) Ovis aries mRNA for Toll-like rece... 38 0.54
CP001357_1883(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 38 0.54
DQ528443_1(DQ528443|pid:none) Arabidopsis thaliana ecotype Pu2-7... 38 0.54
AM482396_1(AM482396|pid:none) Vitis vinifera contig VV78X273276.... 38 0.54
DQ528399_1(DQ528399|pid:none) Arabidopsis thaliana ecotype Bor-1... 38 0.54
DQ138943_1(DQ138943|pid:none) Drosophila erecta voucher stock #1... 38 0.54
AB109215_1(AB109215|pid:none) Hordeum vulgare BRI1 gene for puta... 38 0.54
AK117901_1(AK117901|pid:none) Arabidopsis thaliana At5g49660 mRN... 38 0.54
AL132955_13(AL132955|pid:none) Arabidopsis thaliana DNA chromoso... 38 0.54
AB088206_1(AB088206|pid:none) Hordeum vulgare BRI1 mRNA for puta... 38 0.54
AC140547_3(AC140547|pid:none) Medicago truncatula clone mth2-17p... 38 0.54
AK106346_1(AK106346|pid:none) Oryza sativa Japonica Group cDNA c... 38 0.54
DQ528397_1(DQ528397|pid:none) Arabidopsis thaliana ecotype Bil-5... 38 0.54
AY093068_1(AY093068|pid:none) Arabidopsis thaliana unknown prote... 38 0.54
AF013262_1(AF013262|pid:none) Mus musculus lumican (Ldc) gene, c... 38 0.54
AB025614_3(AB025614|pid:none) Arabidopsis thaliana genomic DNA, ... 38 0.54
AK242225_1(AK242225|pid:none) Oryza sativa Japonica Group cDNA, ... 38 0.54
(P51885) RecName: Full=Lumican; AltName: Full=Keratan sulfate pr... 38 0.54
T10727(T10727) protein kinase Xa21 (EC 2.7.1.-) D, receptor type... 38 0.54
FJ188415_1(FJ188415|pid:none) Solanum bulbocastanum NBS-LRR resi... 38 0.54
AP008216_187(AP008216|pid:none) Oryza sativa (japonica cultivar-... 38 0.54
DQ528395_1(DQ528395|pid:none) Arabidopsis thaliana ecotype An-1 ... 38 0.54
AM485060_3(AM485060|pid:none) Vitis vinifera contig VV78X213418.... 38 0.54
BC109842_1(BC109842|pid:none) Bos taurus leucine rich repeat con... 38 0.54
AB005249_15(AB005249|pid:none) Arabidopsis thaliana genomic DNA,... 38 0.54
(Q8N967) RecName: Full=Leucine-rich repeat and transmembrane dom... 38 0.54
(Q3UV48) RecName: Full=Leucine-rich repeat-containing protein 30... 38 0.54
AK099784_1(AK099784|pid:none) Oryza sativa Japonica Group cDNA c... 37 0.71
AF119041_2(AF119041|pid:none) Lycopersicon esculentum haplotype ... 37 0.71
CR954210_281(CR954210|pid:none) Ostreococcus tauri strain OTTH05... 37 0.71
AK317750_1(AK317750|pid:none) Arabidopsis thaliana AT1G12460 mRN... 37 0.71
BT002951_1(BT002951|pid:none) Arabidopsis thaliana clone RAFL15-... 37 0.71
AF372978_1(AF372978|pid:none) Arabidopsis thaliana AT3g51740/T18... 37 0.71
AK072480_1(AK072480|pid:none) Oryza sativa Japonica Group cDNA c... 37 0.71
FM992688_758(FM992688|pid:none) Candida dubliniensis CD36 chromo... 37 0.71
AF272367_1(AF272367|pid:none) Lycopersicon esculentum verticilli... 37 0.71
BC163107_1(BC163107|pid:none) Danio rerio nyctalopin, mRNA (cDNA... 37 0.71
AY634612_1(AY634612|pid:none) Lycopersicon parviflorum Hcr9-Avr4... 37 0.71
AP008212_1428(AP008212|pid:none) Oryza sativa (japonica cultivar... 37 0.71
AM423964_2(AM423964|pid:none) Vitis vinifera contig VV78X120872.... 37 0.71
AC005967_4(AC005967|pid:none) Arabidopsis thaliana chromosome 2 ... 37 0.71
CU468802_1(CU468802|pid:none) Danio rerio cDNA, clone cssl:d0554. 37 0.71
T04313(T04313) protein kinase Xa21 (EC 2.7.1.-), receptor type -... 37 0.71
AY642125_1(AY642125|pid:none) Bos taurus Toll-like receptor 8 mR... 37 0.71
DQ528424_1(DQ528424|pid:none) Arabidopsis thaliana ecotype Konda... 37 0.71
AY634611_1(AY634611|pid:none) Lycopersicon chmielewskii Hcr9-Avr... 37 0.71
AC148178_8(AC148178|pid:none) Medicago truncatula clone mth2-5b2... 37 0.71
AF196926_1(AF196926|pid:none) Prunus emarginata isolate Pr_em_1 ... 37 0.71
AJ550163_1(AJ550163|pid:none) Arabidopsis thaliana mRNA for LRR ... 37 0.71
EU856781_1(EU856781|pid:none) Phaseolus vulgaris NBS-LRR type pu... 37 0.71
(Q9LHP4) RecName: Full=Receptor-like protein kinase 2; ... 37 0.71
AC140031_16(AC140031|pid:none) Medicago truncatula clone mth2-24... 37 0.71
AP008210_1095(AP008210|pid:none) Oryza sativa (japonica cultivar... 37 0.71
AY826159_1(AY826159|pid:none) Aedes albopictus clone AL-218 leuc... 37 0.71
(Q8BGX3) RecName: Full=Leucine-rich repeat and transmembrane dom... 37 0.71
AC025416_21(AC025416|pid:none) Genomic sequence for Arabidopsis ... 37 0.71
DQ867612_1(DQ867612|pid:none) Drosophila pseudoobscura chromosom... 37 0.71
AM483883_4(AM483883|pid:none) Vitis vinifera contig VV78X110269.... 37 0.71
FJ464553_1(FJ464553|pid:none) Solanum lycopersicum cultivar Crai... 37 0.71
EF094708_1(EF094708|pid:none) Petromyzon marinus isolate PmVLRA.... 37 0.71
AY957615_1(AY957615|pid:none) Ovis aries toll-like receptor 4 (T... 37 0.71
AY309262_1(AY309262|pid:none) Danio rerio LGI2A (Lgi2a) mRNA, co... 37 0.71
DQ867631_1(DQ867631|pid:none) Drosophila miranda strain 0101.3 c... 37 0.71
AC136974_11(AC136974|pid:none) Medicago truncatula clone mth2-22... 37 0.71
FJ708633_1(FJ708633|pid:none) Arabidopsis thaliana leucine-rich ... 37 0.71
DQ084201_1(DQ084201|pid:none) Homo sapiens netrin-G1 ligand spli... 37 0.71
AP004126_12(AP004126|pid:none) Oryza sativa Japonica Group genom... 37 0.71
DQ528422_1(DQ528422|pid:none) Arabidopsis thaliana ecotype KNO-1... 37 0.71
AC124958_12(AC124958|pid:none) Medicago truncatula clone mth2-18... 37 0.71
DQ291158_1(DQ291158|pid:none) Carassius auratus toll-like recept... 37 0.71
AK122211_1(AK122211|pid:none) Mus musculus mRNA for mKIAA0147 pr... 37 0.92
AB495281_1(AB495281|pid:none) Glycine max Rhg4s gene for recepto... 37 0.92
BC025836_1(BC025836|pid:none) Mus musculus carboxypeptidase N, p... 37 0.92
AK118563_1(AK118563|pid:none) Arabidopsis thaliana At1g80080 mRN... 37 0.92
DQ374727_1(DQ374727|pid:none) Oryza meridionalis clone Xa918 rec... 37 0.92
AL732347_6(AL732347|pid:none) Oryza sativa genomic DNA, chromoso... 37 0.92
AB379818_2(AB379818|pid:none) Oryza sativa Japonica Group NBSt1 ... 37 0.92
AY088297_1(AY088297|pid:none) Arabidopsis thaliana clone 5344 mR... 37 0.92
A57676(A57676) protein kinase Xa21 (EC 2.7.1.-), receptor type p... 37 0.92
EU587379_1(EU587379|pid:none) Mentha longifolia verticillium wil... 37 0.92
EF076720_1(EF076720|pid:none) Bos taurus breed Limousin toll-lik... 37 0.92
AM427321_2(AM427321|pid:none) Vitis vinifera contig VV78X190480.... 37 0.92
(Q9M5J9) RecName: Full=Polygalacturonase inhibitor 1; AltName: F... 37 0.92
CP001575_417(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 37 0.92
EF094725_1(EF094725|pid:none) Petromyzon marinus isolate PmVLRA.... 37 0.92
AC148607_8(AC148607|pid:none) Medicago truncatula clone mth2-43g... 37 0.92
AY885772_1(AY885772|pid:none) Oryza glumipatula isolate Xa05 rec... 37 0.92
BT071589_1(BT071589|pid:none) Picea sitchensis clone WS02926_D15... 37 0.92
AY964779_1(AY964779|pid:none) Eptatretus burgeri clone Eb8VLRA.7... 37 0.92
FJ708781_1(FJ708781|pid:none) Arabidopsis thaliana leucine-rich ... 37 0.92
EF409977_1(EF409977|pid:none) Prunus persica polygalacturonase i... 37 0.92
AC137827_8(AC137827|pid:none) Medicago truncatula clone mth2-20g... 37 0.92
CP001037_5526(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 37 0.92
AF506518_1(AF506518|pid:none) Glycine max receptor-like kinase R... 37 0.92
AF271734_1(AF271734|pid:none) Homo sapiens SCRIB1 variant N1 (SC... 37 0.92
AY311527_1(AY311527|pid:none) Solanum torvum verticillium wilt d... 37 0.92
EU587385_1(EU587385|pid:none) Mentha x piperita verticillium wil... 37 0.92
AM475403_2(AM475403|pid:none) Vitis vinifera contig VV78X059505.... 37 0.92
BC060689_1(BC060689|pid:none) Mus musculus scribbled homolog (Dr... 37 0.92
(O50052) RecName: Full=Putative disease resistance protein At4g1... 37 0.92
AB495282_1(AB495282|pid:none) Glycine max Rhg4-like gene for rec... 37 0.92
A86383(A86383) 76.4K protein kinase homolog F4F7.29 - Arabidopsi... 37 0.92
AE013599_3583(AE013599|pid:none) Drosophila melanogaster chromos... 37 0.92
AY885794_1(AY885794|pid:none) Oryza rufipogon isolate Xa27 recep... 37 0.92
AB495283_1(AB495283|pid:none) Glycine max Rhg4-like gene for rec... 37 0.92
DQ374728_1(DQ374728|pid:none) Oryza glumipatula clone Xa913 rece... 37 0.92
AK292898_1(AK292898|pid:none) Homo sapiens cDNA FLJ76690 complet... 37 0.92
EU587387_1(EU587387|pid:none) Mentha spicata verticillium wilt r... 37 0.92
AY224496_1(AY224496|pid:none) Oryza sativa (japonica cultivar-gr... 37 0.92

>AP007172_41(AP007172|pid:none) Aspergillus oryzae RIB40 genomic
DNA, SC206.
Length = 981

Score = 53.1 bits (126), Expect = 1e-05
Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Frame = +1

Query: 7 GKLLTST--SFQHLGKLKKLVISNTNLEMIDDQAFSPLKSTLEELILAGNSLLKSIPSSL 180
G LL S F+ L +L L +SN L + D Q ++S +++L LA N L S P+ +
Sbjct: 457 GNLLRSLPIGFRRLQRLHTLNLSNNKLNLEDIQIIMEMES-VKDLKLAKNHLQGSFPADI 515

Query: 181 LDCKQLEVLDLSSCGLNQLPDLFGACLTSILELNLGNN 294
+ LEVLDL S L +LP+ A LTS+ LN+G+N
Sbjct: 516 KNLSNLEVLDLHSNSLTELPNEV-AYLTSLRVLNVGDN 552

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,048,468,204
Number of extensions: 17089589
Number of successful extensions: 52398
Number of sequences better than 10.0: 1135
Number of HSP's gapped: 51848
Number of HSP's successfully gapped: 1432
Length of query: 303
Length of database: 1,051,180,864
Length adjustment: 128
Effective length of query: 175
Effective length of database: 636,901,312
Effective search space: 111457729600
Effective search space used: 111457729600
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.85 gvh: 0.48 alm: 0.41 top: 0.57 tms: 0.00 mit: 0.32 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.40 pox: 0.30 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

40.0 %: cytoplasmic
24.0 %: mitochondrial
20.0 %: nuclear
8.0 %: vacuolar
4.0 %: cytoskeletal
4.0 %: endoplasmic reticulum

>> prediction for Contig-U01996-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0