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Dicty_cDB
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U12755-1
Contig ID Contig-U12755-1
Contig update 2002.12.18
Contig sequence 
>Contig-U12755-1 (Contig-U12755-1Q) /CSM_Contig/Contig-U12755-1Q.Seq.d
GATAAGAATTTTAACTCAAGGCTGATTATTCTCATGTTTTATCAAGATTC
CCAATTTTAAAAGAACGTATTGTTGAAGTTTCAAATAATGCACTTAGAAA
ATTAGTTAAAGAATGTAATCAATCAATCTNTCAAATGGTTGATGCTGAAA
TGTCTTTTATTAATACTAATCATCCAAATTATCTTTACCAATTAAATAAT
TTATTATTTTCTTCATCTTCATCCTCTTTTGTGGTACCACAAGGTGCTTT
TCAATCAACATCATCAACATCATCATCACCAACATCATCATCATCATCAT
TACCTTTACCACAAAATTCTAATCCTTATAACGATGCTTTAAATCCTTAT
AATATTGATCGTTGTTATCCAATTGATAATCAAATTAAACAGCAGCAACA
ACAACAACAACAACAACAACAACAATCATATCAACAACAACAACAACAAC
AACAAAAGCAACAATCAGGTTTCTTATCAAGAATATTTGGTTCATCATCT
TCACCACCATCACCACCATCACCACCACAACCAAAACAACAACAATCACA
TGAAATTCAAATTCAGCAGCAACAACAACAACAACAACAACAACATTTAA
AAAAACAAAATTTAATATTTGATGATAAATTCAAATTAGAACAATATGGA
CTTAATGATATAACAGAAGATGAAAAGAAACAAATTTATTTACTTAGAAG
ATTATTATTAGCTTATAATGATATAGCTCAATTTAATCTTCAACAAAATA
CTATGAAATTAGTATCATTATTATTAATTGATAAATCAAAGGATATCCTT
CAAAAAGAATTAATAGATTCATTGTACGATCAATCCTCTGTTGATCAATT
ACTCAGAGAGAACGAATTAGTAGTTGCCAAGAGAAACGAATGTATTTATA
AATTGGATTTATTAAAGAAAGCAAAGAAATCTTTATCTCAATCTGAAAAT
AGTGATTTACTTCATTTGTATTAATAGTGATATAAAA
Gap no gap
Contig length 987
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 1073086
End point 1072099
Strand (PLUS/MINUS) MINUS
Number of clones 10
Number of EST 12
Link to clone list U12755
List of clone(s) 

est1=VHM317Z,-43,612
est2=AHL247Z,234,928
est3=VHP393Z,238,951
est4=AHO516Z,254,870
est5=VHC887Z,254,943
est6=CHG826Z,255,974
est7=CHG826F,298,871
est8=VHN521Z,332,943
est9=CHL646F,338,929
est10=SSK612F,395,987
est11=CHL646Z,411,699
est12=VHJ466Z,423,976
Translated Amino Acid sequence 
*ef*LKADYSHVLSRFPILKERIVEVSNNALRKLVKECNQSIXQMVDAEMSFINTNHPNY
LYQLNNLLFSSSSSSFVVPQGAFQSTSSTSSSPTSSSSSLPLPQNSNPYNDALNPYNIDR
CYPIDNQIKQQQQQQQQQQQQSYQQQQQQQQKQQSGFLSRIFGSSSSPPSPPSPPQPKQQ
QSHEIQIQQQQQQQQQQHLKKQNLIFDDKFKLEQYGLNDITEDEKKQIYLLRRLLLAYND
IAQFNLQQNTMKLVSLLLIDKSKDILQKELIDSLYDQSSVDQLLRENELVVAKRNECIYK
LDLLKKAKKSLSQSENSDLLHLY***yk
Translated Amino Acid sequence (All Frames) 
Frame A:
dknfnsrliilmfyqdsqf*knvllkfqimhlen*lknvinqsxkwlmlkcllliliiqi
iftn*iiyyflhlhpllwyhkvlfnqhhqhhhhqhhhhhhylyhkililitml*iliili
vviqliiklnssnnnnnnnnnnhinnnnnnnksnnqvsyqeylvhhlhhhhhhhhhnqnn
nnhmkfkfssnnnnnnnni*knki*ylminsn*nnmdlmi*qkmkrnkfiyledyy*lim
i*lnlifnkil*n*yhyy*linqrisfkkn**ihctinpllinysertn**lpretnvfi
nwiy*rkqrnlylnlkiviyficinsdik


Frame B:
iriltqg*lfscfikipnfkrtyc*sfk*ct*kis*rm*sinlsng*c*nvfy*y*sskl
slpik*fiiffifilfcgttrcfsiniiniiitniiiiiitfttkf*sl*rcfksl*y*s
llsn**sn*taatttttttttiistttttttkatirflikniwfiifttittittttktt
tit*nsnsaattttttttfkktkfni***iqirtiwt**ynrr*ketnlft*kiiisl**
yssi*sstkyyeisiiiin**ikgypskrinrfivrsilc*sitqrerisscqekrmyl*
igfikeskeifisi*k**ftsfvlivi*


Frame C:
*ef*LKADYSHVLSRFPILKERIVEVSNNALRKLVKECNQSIXQMVDAEMSFINTNHPNY
LYQLNNLLFSSSSSSFVVPQGAFQSTSSTSSSPTSSSSSLPLPQNSNPYNDALNPYNIDR
CYPIDNQIKQQQQQQQQQQQQSYQQQQQQQQKQQSGFLSRIFGSSSSPPSPPSPPQPKQQ
QSHEIQIQQQQQQQQQQHLKKQNLIFDDKFKLEQYGLNDITEDEKKQIYLLRRLLLAYND
IAQFNLQQNTMKLVSLLLIDKSKDILQKELIDSLYDQSSVDQLLRENELVVAKRNECIYK
LDLLKKAKKSLSQSENSDLLHLY***yk
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U12755-1 (Contig-U12755-1Q)
/CSM_Contig/Contig-U12755-1Q.Seq.d
         (987 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U12755-1 (Contig-U12755-1Q) /CSM_Contig/Conti...   757  0.0
Contig-U13938-1 (Contig-U13938-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U12467-1 (Contig-U12467-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U12305-1 (Contig-U12305-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U13543-1 (Contig-U13543-1Q) /CSM_Contig/Conti...    38  0.018
Contig-U13321-1 (Contig-U13321-1Q) /CSM_Contig/Conti...    38  0.018
Contig-U13086-1 (Contig-U13086-1Q) /CSM_Contig/Conti...    38  0.018
Contig-U12498-1 (Contig-U12498-1Q) /CSM_Contig/Conti...    38  0.018
Contig-U11834-1 (Contig-U11834-1Q) /CSM_Contig/Conti...    38  0.018
Contig-U03025-1 (Contig-U03025-1Q) /CSM_Contig/Conti...    34  0.28

>Contig-U12755-1 (Contig-U12755-1Q) /CSM_Contig/Contig-U12755-1Q.Seq.d
          Length = 987

 Score =  757 bits (382), Expect = 0.0
 Identities = 382/382 (100%)
 Strand = Plus / Plus

                                                                       
Query: 606 caaaatttaatatttgatgataaattcaaattagaacaatatggacttaatgatataaca 665
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 caaaatttaatatttgatgataaattcaaattagaacaatatggacttaatgatataaca 665

                                                                       
Query: 666 gaagatgaaaagaaacaaatttatttacttagaagattattattagcttataatgatata 725
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gaagatgaaaagaaacaaatttatttacttagaagattattattagcttataatgatata 725

                                                                       
Query: 726 gctcaatttaatcttcaacaaaatactatgaaattagtatcattattattaattgataaa 785
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 gctcaatttaatcttcaacaaaatactatgaaattagtatcattattattaattgataaa 785

                                                                       
Query: 786 tcaaaggatatccttcaaaaagaattaatagattcattgtacgatcaatcctctgttgat 845
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 tcaaaggatatccttcaaaaagaattaatagattcattgtacgatcaatcctctgttgat 845

                                                                       
Query: 846 caattactcagagagaacgaattagtagttgccaagagaaacgaatgtatttataaattg 905
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 caattactcagagagaacgaattagtagttgccaagagaaacgaatgtatttataaattg 905

                                                                       
Query: 906 gatttattaaagaaagcaaagaaatctttatctcaatctgaaaatagtgatttacttcat 965
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 gatttattaaagaaagcaaagaaatctttatctcaatctgaaaatagtgatttacttcat 965

                                 
Query: 966 ttgtattaatagtgatataaaa 987
           ||||||||||||||||||||||
Sbjct: 966 ttgtattaatagtgatataaaa 987


 Score =  490 bits (247), Expect = e-138
 Identities = 250/250 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   gataagaattttaactcaaggctgattattctcatgttttatcaagattcccaattttaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gataagaattttaactcaaggctgattattctcatgttttatcaagattcccaattttaa 60

                                                                       
Query: 61  aagaacgtattgttgaagtttcaaataatgcacttagaaaattagttaaagaatgtaatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aagaacgtattgttgaagtttcaaataatgcacttagaaaattagttaaagaatgtaatc 120

                                                                       
Query: 121 aatcaatctntcaaatggttgatgctgaaatgtcttttattaatactaatcatccaaatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatcaatctntcaaatggttgatgctgaaatgtcttttattaatactaatcatccaaatt 180

                                                                       
Query: 181 atctttaccaattaaataatttattattttcttcatcttcatcctcttttgtggtaccac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atctttaccaattaaataatttattattttcttcatcttcatcctcttttgtggtaccac 240

                     
Query: 241 aaggtgcttt 250
           ||||||||||
Sbjct: 241 aaggtgcttt 250


 Score =  188 bits (95), Expect = 8e-48
 Identities = 95/95 (100%)
 Strand = Plus / Plus

                                                                       
Query: 301 tacctttaccacaaaattctaatccttataacgatgctttaaatccttataatattgatc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tacctttaccacaaaattctaatccttataacgatgctttaaatccttataatattgatc 360

                                              
Query: 361 gttgttatccaattgataatcaaattaaacagcag 395
           |||||||||||||||||||||||||||||||||||
Sbjct: 361 gttgttatccaattgataatcaaattaaacagcag 395


 Score = 81.8 bits (41), Expect = 1e-15
 Identities = 41/41 (100%)
 Strand = Plus / Plus

                                                    
Query: 529 aaccaaaacaacaacaatcacatgaaattcaaattcagcag 569
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 aaccaaaacaacaacaatcacatgaaattcaaattcagcag 569


 Score = 71.9 bits (36), Expect = 1e-12
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                               
Query: 465 tcaggtttcttatcaagaatatttggttcatcatct 500
           ||||||||||||||||||||||||||||||||||||
Sbjct: 465 tcaggtttcttatcaagaatatttggttcatcatct 500


>Contig-U13938-1 (Contig-U13938-1Q) /CSM_Contig/Contig-U13938-1Q.Seq.d
          Length = 1111

 Score = 40.1 bits (20), Expect = 0.004
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 205 tattttcttcatcttcatcctctt 228
           |||| |||||||||||||||||||
Sbjct: 301 tattatcttcatcttcatcctctt 278


>Contig-U12467-1 (Contig-U12467-1Q) /CSM_Contig/Contig-U12467-1Q.Seq.d
          Length = 1279

 Score = 40.1 bits (20), Expect = 0.004
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 209  ttcttcatcttcatcctctt 228
            ||||||||||||||||||||
Sbjct: 1027 ttcttcatcttcatcctctt 1046


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 25,962
Number of Sequences: 6905
Number of extensions: 25962
Number of successful extensions: 3244
Number of sequences better than 10.0: 421
length of query: 987
length of database: 5,674,871
effective HSP length: 16
effective length of query: 971
effective length of database: 5,564,391
effective search space: 5403023661
effective search space used: 5403023661
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.12. 3
Homology vs DNA 
Query= Contig-U12755-1 (Contig-U12755-1Q) /CSM_Contig/Contig-U12755-1Q.Seq.d
         (987 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AJ251163) Dictyostelium discoideum dymB gene for dynamin B ...   722   0.0    5
(BJ379563) Dictyostelium discoideum cDNA clone:ddc35d08, 3' ...   660   0.0    4
(BJ446170) Dictyostelium discoideum cDNA clone:ddv61j23, 3' ...   658   0.0    4
(BJ438276) Dictyostelium discoideum cDNA clone:ddv36n22, 3' ...   660   0.0    3
(BJ354378) Dictyostelium discoideum cDNA clone:dda53m12, 3' ...   628   0.0    4
(BJ444996) Dictyostelium discoideum cDNA clone:ddv58i05, 3' ...   660   0.0    3
(BJ356403) Dictyostelium discoideum cDNA clone:dda60o03, 3' ...   515   0.0    3
(BJ442328) Dictyostelium discoideum cDNA clone:ddv49d18, 3' ...   660   0.0    2
(BJ444035) Dictyostelium discoideum cDNA clone:ddv55b05, 3' ...   490   0.0    3
(BJ382635) Dictyostelium discoideum cDNA clone:ddc45k12, 3' ...    54   0.010  1
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl...    32   0.028  13
(CD311543) StrPu691.004907 Sea urchin larva cDNA library MPM...    50   0.029  2
(AR551000) Sequence 6131 from patent US 6747137.                   32   0.046  4
(AE017308) Mycoplasma mobile 163K complete genome.                 34   0.075  15
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568...    38   0.083  8
(BX000529) Zebrafish DNA sequence from clone DKEY-191N2 in l...    34   0.096  2
(CR394565) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    34   0.097  2
(AE014831) Plasmodium falciparum 3D7 chromosome 10 section 3...    32   0.16   13
(AE014845) Plasmodium falciparum 3D7 chromosome 12, section ...    34   0.21   12
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...    36   0.38   11
(AC181130) Strongylocentrotus purpuratus clone R3-3037C01, W...    38   0.39   8
(EK318452) 1095462420913 Global-Ocean-Sampling_GS-31-01-01-1...    42   0.52   2
(ET970436) CHO_OF648xf13f1.ab1 CHO_OF Nicotiana tabacum geno...    46   0.56   2
(ET970492) CHO_OF648xf13r1.ab1 CHO_OF Nicotiana tabacum geno...    46   0.58   2
(AC185094) Bos taurus clone CH240-178P12, WORKING DRAFT SEQU...    46   0.60   6
(FI087526) CHO_OF7094xh15r1.ab1 CHO_OF7 Nicotiana tabacum ge...    46   0.61   2
(AC196108) Pan troglodytes BAC clone CH251-505O10 from chrom...    48   0.63   1
(AL162311) Human chromosome 14 DNA sequence BAC R-317N8 of l...    48   0.63   1
(AL137818) Human chromosome 14 DNA sequence BAC R-102C24 of ...    48   0.63   1
(AC087539) Homo sapiens BAC clone RP11-95C23 from 7, complet...    48   0.63   1
(AL157757) Human chromosome 14 DNA sequence *** IN PROGRESS ...    48   0.63   1
(AC181857) Strongylocentrotus purpuratus clone R3-1020G24, W...    48   0.63   1
(AU074405) Dictyostelium discoideum slug cDNA, clone SSK612.       48   0.63   1
(ER619421) 1093017381413 Global-Ocean-Sampling_GS-36-01-01-2...    32   0.67   4
(AE014851) Plasmodium falciparum 3D7 chromosome 12, section ...    38   0.67   9
(AE014816) Plasmodium falciparum 3D7 chromosome 14 section 1...    32   0.69   11
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423...    40   0.93   9
(AC115607) Dictyostelium discoideum chromosome 2 map 4559693...    40   0.94   4
(AC126461) Rattus norvegicus clone CH230-4F20, *** SEQUENCIN...    34   1.1    8
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173...    34   1.3    8
(AL929359) Plasmodium falciparum strain 3D7, chromosome 9; s...    42   1.3    9
(AE001438) Clostridium acetobutylicum ATCC 824 megaplasmid p...    34   1.5    5
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074...    34   1.5    11
(AC005308) Plasmodium falciparum chromosome 12 clone 3D7, **...    34   1.8    10
(EK413714) 1095505926830 Global-Ocean-Sampling_GS-31-01-01-1...    40   1.9    2
(AL929356) Plasmodium falciparum strain 3D7, chromosome 9; s...    34   2.0    12
(EK067445) 1092960143637 Global-Ocean-Sampling_GS-31-01-01-1...    44   2.1    2
(EK212189) 1095460102593 Global-Ocean-Sampling_GS-31-01-01-1...    38   2.1    2
(CG772101) TcB51.1_G07_SP6 Tribolium BAC library Tribolium c...    42   2.2    2
(EK387639) 1095469489395 Global-Ocean-Sampling_GS-31-01-01-1...    38   2.3    2
(CW945149) TcB27.3_A01_T7 Tribolium BAC library Tribolium ca...    42   2.3    2
(EJ191274) 1092344199854 Global-Ocean-Sampling_GS-27-01-01-1...    40   2.3    2
(ER594892) 1093016217474 Global-Ocean-Sampling_GS-36-01-01-2...    40   2.5    2
(AE017347) Cryptococcus neoformans var. neoformans JEC21 chr...    46   2.5    1
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047...    46   2.5    1
(AL136147) Human DNA sequence from clone RP5-896L10 on chrom...    46   2.5    1
(AC149194) Papio anubis clone RP41-79H9, WORKING DRAFT SEQUE...    46   2.5    1
(AC149115) Papio anubis clone RP41-375O12, WORKING DRAFT SEQ...    46   2.5    1
(AC135666) Rattus norvegicus clone CH230-6D7, *** SEQUENCING...    46   2.5    1
(AC211119) Chlorocebus aethiops clone CH252-503G9, WORKING D...    46   2.5    1
(AC179845) Strongylocentrotus purpuratus clone R3-1007N3, WO...    46   2.5    1
(AC175089) Glycine tomentella clone gtt1-63m11, WORKING DRAF...    46   2.5    1
(AC170285) Bos taurus clone CH240-223C21, WORKING DRAFT SEQU...    46   2.5    1
(AC170190) Macaca mulatta clone CH250-424H3, WORKING DRAFT S...    46   2.5    1
(AC165897) Bos taurus clone CH240-174L17, WORKING DRAFT SEQU...    46   2.5    1
(AC020645) Homo sapiens chromosome 1 clone RP11-472P1 map 1,...    46   2.5    1
(FH168073) CHO_OF3266xg06r1.ab1 CHO_OF3 Nicotiana tabacum ge...    46   2.5    1
(EJ693458) 1092956010914 Global-Ocean-Sampling_GS-30-02-01-1...    46   2.5    1
(CZ997015) 185814 Tomato MboI BAC Library Solanum lycopersic...    46   2.5    1
(DN316396) PL06023B1F04 cDNA from juvenile hermaphodites Sch...    46   2.5    1
(CF691257) CCAHE28TR C.neoformans strain JEC21 Cryptococcus ...    46   2.5    1
(AE014843) Plasmodium falciparum 3D7 chromosome 11 section 8...    34   2.9    9
(AC022891) Homo sapiens chromosome 11 clone RP11-524K20 map ...    34   3.0    6
(AC152424) Medicago truncatula chromosome 8 clone mth2-58m16...    36   3.2    5
(BX004877) Zebrafish DNA sequence from clone DKEY-7L19 in li...    34   3.2    6
(AM427175) Vitis vinifera contig VV78X050611.9, whole genome...    38   3.3    2
(AC096472) Rattus norvegicus clone CH230-82H23, WORKING DRAF...    34   3.5    8
(AL590807) Human DNA sequence from clone RP11-325L2 on chrom...    44   3.7    5
(CR524828) Zebrafish DNA sequence from clone CH211-22G2 in l...    42   3.8    4
(AL929357) Plasmodium falciparum strain 3D7, chromosome 9; s...    34   3.8    9
(AY653733) Acanthamoeba polyphaga mimivirus, complete genome.      34   3.9    18
(AM433832) Vitis vinifera contig VV78X067529.9, whole genome...    36   4.1    5
(AC155872) Bos taurus clone CH240-29K7, WORKING DRAFT SEQUEN...    38   4.2    3
(BX511258) Zebrafish DNA sequence from clone CH211-81E5 in l...    40   4.2    6
(BJ410096) Dictyostelium discoideum cDNA clone:ddv11o01, 5' ...    40   4.8    2
(EK151580) 1095456053780 Global-Ocean-Sampling_GS-31-01-01-1...    36   5.0    2
(AE014840) Plasmodium falciparum 3D7 chromosome 11 section 5...    34   5.1    9
(CP000404) Borrelia afzelii PKo plasmid lp31 fragment a, com...    40   5.1    3
(AK115526) Ciona intestinalis cDNA, clone:cieg058i05, full i...    36   5.4    2
(CU469464) Candidatus Phytoplasma mali strain AT complete ch...    36   5.4    15
(EU366902) Staphylococcus aureus plasmid pV030-8, complete s...    38   5.7    3
(BQ451530) PfESToab01f10.y1 Plasmodium falciparum 3D7 asexua...    42   5.8    2
(AC212434) Solanum lycopersicum chromosome 11 clone C11HBa00...    38   5.8    5
(BJ425268) Dictyostelium discoideum cDNA clone:ddv55n02, 5' ...    40   5.9    2
(AC193539) Pan troglodytes BAC clone CH251-454G8 from chromo...    38   5.9    5
(CU570762) M.truncatula DNA sequence from clone MTH2-16K15 o...    38   6.0    4
(BJ369227) Dictyostelium discoideum cDNA clone:ddc49c23, 5' ...    40   6.1    2
(AC178425) Strongylocentrotus purpuratus clone R3-3113L12, W...    32   6.1    7
(BJ364332) Dictyostelium discoideum cDNA clone:ddc31h11, 5' ...    40   6.2    2
(AC008769) Homo sapiens chromosome 5 clone CTD-2006B8, compl...    38   6.3    5

>(AJ251163) Dictyostelium discoideum dymB gene for dynamin B
            homologue.
          Length = 2763

 Score =  722 bits (364), Expect(5) = 0.0
 Identities = 364/364 (100%)
 Strand = Plus / Plus


Query: 611  tttaatatttgatgataaattcaaattagaacaatatggacttaatgatataacagaaga 670
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2400 tttaatatttgatgataaattcaaattagaacaatatggacttaatgatataacagaaga 2459


Query: 671  tgaaaagaaacaaatttatttacttagaagattattattagcttataatgatatagctca 730
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2460 tgaaaagaaacaaatttatttacttagaagattattattagcttataatgatatagctca 2519


Query: 731  atttaatcttcaacaaaatactatgaaattagtatcattattattaattgataaatcaaa 790
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2520 atttaatcttcaacaaaatactatgaaattagtatcattattattaattgataaatcaaa 2579


Query: 791  ggatatccttcaaaaagaattaatagattcattgtacgatcaatcctctgttgatcaatt 850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2580 ggatatccttcaaaaagaattaatagattcattgtacgatcaatcctctgttgatcaatt 2639


Query: 851  actcagagagaacgaattagtagttgccaagagaaacgaatgtatttataaattggattt 910
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2640 actcagagagaacgaattagtagttgccaagagaaacgaatgtatttataaattggattt 2699


Query: 911  attaaagaaagcaaagaaatctttatctcaatctgaaaatagtgatttacttcatttgta 970
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2700 attaaagaaagcaaagaaatctttatctcaatctgaaaatagtgatttacttcatttgta 2759


Query: 971  ttaa 974
            ||||
Sbjct: 2760 ttaa 2763

 Score =  450 bits (227), Expect(5) = 0.0
 Identities = 229/230 (99%)
 Strand = Plus / Plus


Query: 21   gctgattattctcatgttttatcaagattcccaattttaaaagaacgtattgttgaagtt 80
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1810 gctgattattctcatgttttatcaagattcccaattttaaaagaacgtattgttgaagtt 1869


Query: 81   tcaaataatgcacttagaaaattagttaaagaatgtaatcaatcaatctntcaaatggtt 140
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1870 tcaaataatgcacttagaaaattagttaaagaatgtaatcaatcaatctctcaaatggtt 1929


Query: 141  gatgctgaaatgtcttttattaatactaatcatccaaattatctttaccaattaaataat 200
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1930 gatgctgaaatgtcttttattaatactaatcatccaaattatctttaccaattaaataat 1989


Query: 201  ttattattttcttcatcttcatcctcttttgtggtaccacaaggtgcttt 250
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1990 ttattattttcttcatcttcatcctcttttgtggtaccacaaggtgcttt 2039

 Score =  180 bits (91), Expect(5) = 0.0
 Identities = 94/95 (98%)
 Strand = Plus / Plus


Query: 301  tacctttaccacaaaattctaatccttataacgatgctttaaatccttataatattgatc 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2090 tacctttaccacaaaattctaatccttataacgatgctttaaatccttataatattgatc 2149


Query: 361  gttgttatccaattgataatcaaattaaacagcag 395
            ||| |||||||||||||||||||||||||||||||
Sbjct: 2150 gttcttatccaattgataatcaaattaaacagcag 2184

 Score = 54.0 bits (27), Expect(5) = 0.0
 Identities = 27/27 (100%)
 Strand = Plus / Plus


Query: 465  tcaggtttcttatcaagaatatttggt 491
            |||||||||||||||||||||||||||
Sbjct: 2254 tcaggtttcttatcaagaatatttggt 2280

 Score = 40.1 bits (20), Expect(5) = 0.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus


Query: 1    gataagaattttaactcaag 20
            ||||||||||||||||||||
Sbjct: 1791 gataagaattttaactcaag 1810

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,043,669,427
Number of extensions: 68496575
Number of successful extensions: 6373169
Number of sequences better than 10.0: 250
Length of query: 987
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 963
Effective length of database: 97,308,875,965
Effective search space: 93708447554295
Effective search space used: 93708447554295
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7. 4
Homology vs Protein 
Query= Contig-U12755-1 (Contig-U12755-1Q) /CSM_Contig/Contig-U12755-1Q.Seq.d
         (987 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ251163_1(AJ251163|pid:none) Dictyostelium discoideum dymB gene...   341   2e-92
FM992692_114(FM992692|pid:none) Candida dubliniensis CD36 chromo...    61   7e-08
(Q94464) RecName: Full=Dynamin-A;  &X99669_1(X99669|pid:none)          59   3e-07
FM992690_513(FM992690|pid:none) Candida dubliniensis CD36 chromo...    59   3e-07
CR382135_509(CR382135|pid:none) Debaryomyces hansenii strain CBS...    57   1e-06
CP000496_423(CP000496|pid:none) Pichia stipitis CBS 6054 chromos...    57   1e-06
CR382132_1233(CR382132|pid:none) Yarrowia lipolytica strain CLIB...    57   1e-06
CP000501_276(CP000501|pid:none) Pichia stipitis CBS 6054 chromos...    56   2e-06
CU928166_118(CU928166|pid:none) Kluyveromyces thermotolerans str...    56   2e-06
CR382126_555(CR382126|pid:none) Kluyveromyces lactis strain NRRL...    55   3e-06
FN392319_1443(FN392319|pid:none) Pichia pastoris GS115 chromosom...    54   6e-06
AY780359_1(AY780359|pid:none) Pichia angusta dynamin-like GTP-bi...    54   6e-06
CU640366_1137(CU640366|pid:none) Podospora anserina genomic DNA ...    53   1e-05
CR382130_396(CR382130|pid:none) Yarrowia lipolytica strain CLIB1...    52   2e-05
CR382122_550(CR382122|pid:none) Kluyveromyces lactis strain NRRL...    52   2e-05
AM270026_46(AM270026|pid:none) Aspergillus niger contig An02c031...    51   5e-05
AP007175_671(AP007175|pid:none) Aspergillus oryzae RIB40 genomic...    51   5e-05
AE016814_13(AE016814|pid:none) Ashbya gossypii (= Eremothecium g...    51   7e-05
X54316_1(X54316|pid:none) S. cerevisiae SPO15 gene coding for a ...    51   7e-05
M33315_1(M33315|pid:none) S.cerevisiae GTP-binding protein (VPS1...    51   7e-05
CU928174_56(CU928174|pid:none) Zygosaccharomyces rouxii strain C...    51   7e-05
AM920436_1509(AM920436|pid:none) Penicillium chrysogenum Wiscons...    50   2e-04
BC000136_1(BC000136|pid:none) Homo sapiens cDNA clone IMAGE:2984...    49   2e-04
AF061795_1(AF061795|pid:none) Homo sapiens dynamin-like protein ...    49   2e-04
AK294533_1(AK294533|pid:none) Homo sapiens cDNA FLJ59504 complet...    49   2e-04
AF107048_1(AF107048|pid:none) Rattus norvegicus dynamin-like pro...    49   2e-04
AK299926_1(AK299926|pid:none) Homo sapiens cDNA FLJ55044 complet...    49   2e-04
AB236317_1(AB236317|pid:none) Cricetulus longicaudatus DLP1 mRNA...    49   2e-04
(Q2KIA5) RecName: Full=Dynamin-1-like protein;          EC=3.6.5...    49   2e-04
BC024590_1(BC024590|pid:none) Homo sapiens dynamin 1-like, mRNA ...    49   2e-04
AK051443_1(AK051443|pid:none) Mus musculus 12 days embryo spinal...    49   2e-04
AB384831_1(AB384831|pid:none) Synthetic construct DNA, clone: pF...    49   2e-04
AB169569_1(AB169569|pid:none) Macaca fascicularis brain cDNA, cl...    49   2e-04
AF132727_1(AF132727|pid:none) Rattus norvegicus dynamin-like pro...    49   2e-04
AB209070_1(AB209070|pid:none) Homo sapiens mRNA for Dynamin-like...    49   2e-04
BC040777_1(BC040777|pid:none) Mus musculus dynamin 1-like, mRNA ...    49   2e-04
AF000430_1(AF000430|pid:none) Homo sapiens dynamin-like protein ...    49   2e-04
AK154123_1(AK154123|pid:none) Mus musculus NOD-derived CD11c +ve...    49   2e-04
AF166274_1(AF166274|pid:none) Caenorhabditis elegans dynamin-rel...    49   3e-04
T29559(T29559)hypothetical protein T12E12.4 - Caenorhabditis ele...    49   3e-04
AE017341_537(AE017341|pid:none) Cryptococcus neoformans var. neo...    49   3e-04
BC044291_1(BC044291|pid:none) Xenopus laevis similar to dynamin ...    49   3e-04
AB072375_1(AB072375|pid:none) Arabidopsis thaliana DRP3B mRNA fo...    48   5e-04
D84514(D84514)dynamin-like protein [imported] - Arabidopsis thal...    48   5e-04
AM450965_2(AM450965|pid:none) Vitis vinifera contig VV78X135442....    48   5e-04
(Q8LFT2) RecName: Full=Dynamin-related protein 3B; AltName: Full...    48   5e-04
FN317536_1(FN317536|pid:none) Schistosoma japonicum isolate Anhu...    48   6e-04
BC046374_1(BC046374|pid:none) Xenopus laevis dynamin 1-like, mRN...    48   6e-04
AM270061_74(AM270061|pid:none) Aspergillus niger contig An03c020...    47   8e-04
AC174339_25(AC174339|pid:none) Medicago truncatula clone mth2-16...    47   0.001
AB170353_1(AB170353|pid:none) Macaca fascicularis brain cDNA clo...    47   0.001
AK105435_1(AK105435|pid:none) Oryza sativa Japonica Group cDNA c...    46   0.002
FN392321_766(FN392321|pid:none) Pichia pastoris GS115 chromosome...    45   0.005
AF012833_1(AF012833|pid:none) Arabidopsis thaliana ADL2 mRNA, co...    44   0.007
BT058724_1(BT058724|pid:none) Salmo salar clone ssal-rgf-001-110...    44   0.011
BC107763_1(BC107763|pid:none) Homo sapiens dynamin 1-like, mRNA ...    42   0.025
CP001160_120(CP001160|pid:none) Thalassiosira pseudonana CCMP133...    42   0.032
AM481311_1(AM481311|pid:none) Vitis vinifera contig VV78X009395....    42   0.032
AY069246_1(AY069246|pid:none) Drosophila melanogaster GM01975 fu...    42   0.042
BT001269_1(BT001269|pid:none) Drosophila melanogaster AT04516 fu...    42   0.042
FN357312_47(FN357312|pid:none) Schistosoma mansoni genome sequen...    41   0.072
DQ907940_1(DQ907940|pid:none) Lymnaea stagnalis dynamin isoform ...    41   0.072
AL133442_1(AL133442|pid:none) S.pombe chromosome I cosmid c767.        40   0.12
Z98763_14(Z98763|pid:none) S.pombe chromosome I cosmid c9G1.           40   0.12
AE017343_166(AE017343|pid:none) Cryptococcus neoformans var. neo...    40   0.16
(Q7T2P0) RecName: Full=Interferon-induced GTP-binding protein Mx...    39   0.21
AF020212_1(AF020212|pid:none) Rattus norvegicus DLP1 splice vari...    39   0.21
S34399(S34399;S15497) dynamin 3 - fruit fly (Drosophila melanoga...    39   0.21
AF542013_1(AF542013|pid:none) Griffithsia japonica dynamin-like ...    39   0.21
S17975(S17975)dynamin-like protein 3 - fruit fly (Drosophila sp.)      39   0.21
S17974(S17974) dynamin-like protein 1 - fruit fly (Drosophila me...    39   0.21
AE014298_2377(AE014298|pid:none) Drosophila melanogaster chromos...    39   0.21
AF020211_1(AF020211|pid:none) Rattus norvegicus DLP1 splice vari...    39   0.21
CP001333_329(CP001333|pid:none) Micromonas sp. RCC299 chromosome...    38   0.61
CR856025_1(CR856025|pid:none) Paramecium tetraurelia macronuclea...    37   0.80
CR856026_1(CR856026|pid:none) Paramecium tetraurelia macronuclea...    37   0.80
AF156167_1(AF156167|pid:none) Trypanosoma brucei dynamin-related...    37   1.4
AE014186_442(AE014186|pid:none) Plasmodium falciparum 3D7 chromo...    37   1.4
CU633749_2659(CU633749|pid:none) Cupriavidus taiwanensis str. LM...    36   1.8
AF458071_1(AF458071|pid:none) Plasmodium yoelii yoelii dynamin-l...    36   1.8
(Q4U4N4) RecName: Full=Interferon-induced GTP-binding protein Mx...    36   2.3
BC097134_1(BC097134|pid:none) Danio rerio dynamin 2, mRNA (cDNA ...    36   2.3
EF125982_1(EF125982|pid:none) GenusX sp. 2 NBH-2006 dynamin gene...    35   3.0
(P39054) RecName: Full=Dynamin-2;          EC=3.6.5.5; AltName: ...    35   4.0
JC4305(JC4305)dynamin II - human                                       35   4.0
AK005012_1(AK005012|pid:none) Mus musculus adult male liver cDNA...    35   4.0
L31398_1(L31398|pid:none) Mus musculus dynamin (UDnm) mRNA, comp...    35   4.0
AK015410_1(AK015410|pid:none) Mus musculus adult male testis cDN...    35   4.0
L36983_1(L36983|pid:none) Homo sapiens dynamin (DNM) mRNA, compl...    35   4.0
Z79596_7(Z79596|pid:none) Caenorhabditis elegans Cosmid C02C6, c...    35   4.0
AK289831_1(AK289831|pid:none) Homo sapiens cDNA FLJ78533 complet...    35   4.0
AF167982_1(AF167982|pid:none) Caenorhabditis elegans dynamin (dy...    35   4.0
(P39052) RecName: Full=Dynamin-2;          EC=3.6.5.5;  &A53165(...    35   4.0
FN357403_18(FN357403|pid:none) Schistosoma mansoni genome sequen...    35   4.0
AB209213_1(AB209213|pid:none) Homo sapiens mRNA for dynamin 2 is...    35   4.0
(A6H7I5) RecName: Full=Dynamin-2;          EC=3.6.5.5;  &BC14625...    35   4.0
BC010233_1(BC010233|pid:none) Mus musculus dynamin 2, mRNA (cDNA...    35   4.0
AK097875_1(AK097875|pid:none) Homo sapiens cDNA FLJ40556 fis, cl...    35   4.0
B53165(B53165)dynamin II isoform ba - rat                              35   4.0
AK171049_1(AK171049|pid:none) Mus musculus NOD-derived CD11c +ve...    35   4.0
AX880278_1(AX880278|pid:none) Sequence 15183 from Patent EP10746...    35   4.0
AL808027_23(AL808027|pid:none) Mouse DNA sequence from clone RP2...    35   5.2
(Q08DF4) RecName: Full=Dynamin-1;          EC=3.6.5.5;  &BC12377...    35   5.2
BC142568_1(BC142568|pid:none) Xenopus laevis hypothetical protei...    35   5.2
CP000140_3647(CP000140|pid:none) Parabacteroides distasonis ATCC...    35   5.2
A40671(A40671)dynamin, internal form 1, long C-terminal form - h...    35   5.2
AK296326_1(AK296326|pid:none) Homo sapiens cDNA FLJ60610 complet...    35   5.2
AP005112_6(AP005112|pid:none) Oryza sativa Japonica Group genomi...    35   5.2
AB070100_1(AB070100|pid:none) Macaca fascicularis testis cDNA cl...    34   6.8
AK147678_1(AK147678|pid:none) Mus musculus adult male brain UNDE...    34   6.8
AJ489587_1(AJ489587|pid:none) Plasmodium falciparum dyn gene for...    34   6.8
CR856028_1(CR856028|pid:none) Paramecium tetraurelia macronuclea...    34   6.8
AK056279_1(AK056279|pid:none) Homo sapiens cDNA FLJ31717 fis, cl...    34   6.8
AL031864_7(AL031864|pid:none) Human DNA sequence from clone RP4-...    34   6.8
AL136712_1(AL136712|pid:none) Homo sapiens mRNA; cDNA DKFZp566K0...    34   6.8
(Q08877) RecName: Full=Dynamin-3;          EC=3.6.5.5; AltName: ...    34   6.8
(Q8BZ98) RecName: Full=Dynamin-3;          EC=3.6.5.5;  &AK03619...    34   6.8
(Q95JS9) RecName: Full=Coiled-coil domain-containing protein 110;      34   6.8
AK049724_1(AK049724|pid:none) Mus musculus 12 days embryo spinal...    34   6.8
CP000554_2037(CP000554|pid:none) Prochlorococcus marinus str. MI...    34   6.8
(Q05193) RecName: Full=Dynamin-1;          EC=3.6.5.5;  &AL59070...    34   8.8
B40671(B40671)dynamin, internal form 2, short C-terminal form - ...    34   8.8
AL808027_22(AL808027|pid:none) Mouse DNA sequence from clone RP2...    34   8.8
AL808027_24(AL808027|pid:none) Mouse DNA sequence from clone RP2...    34   8.8
BT044881_1(BT044881|pid:none) Salmo salar clone ssal-rgf-506-139...    34   8.8
EU975718_1(EU975718|pid:none) Zea mays clone 498036 dynamin-2A m...    34   8.8
L31396_1(L31396|pid:none) Mus musculus dynamin (BreDnm15) mRNA, ...    34   8.8
L31397_1(L31397|pid:none) Mus musculus dynamin (BreDnm19) mRNA, ...    34   8.8
(Q61359) RecName: Full=Dynamin-1;          EC=3.6.5.5;  &BC03467...    34   8.8
(Q8S3C9) RecName: Full=Dynamin-related protein 1D; AltName: Full...    34   8.8
AC003672_9(AC003672|pid:none) Arabidopsis thaliana chromosome 2 ...    34   8.8
BT063157_1(BT063157|pid:none) Zea mays full-length cDNA clone ZM...    34   8.8
AF488807_1(AF488807|pid:none) Arabidopsis thaliana dynamin-like ...    34   8.8
AJ304844_1(AJ304844|pid:none) Arabidopsis thaliana mRNA for dyna...    34   8.8
AK144142_1(AK144142|pid:none) Mus musculus colon RCB-0549 Cle-H3...    34   8.8
AL808027_21(AL808027|pid:none) Mouse DNA sequence from clone RP2...    34   8.8
L07807_1(L07807|pid:none) Human dynamin mRNA, alternative exons ...    34   8.8
AK011651_1(AK011651|pid:none) Mus musculus 10 days embryo whole ...    34   8.8
AM494966_218(AM494966|pid:none) Leishmania braziliensis chromoso...    34   8.8
AK295101_1(AK295101|pid:none) Homo sapiens cDNA FLJ53472 complet...    34   8.8
EU682271_2(EU682271|pid:none) Canis lupus familiaris dynamin 1 (...    34   8.8
(Q9ZES2) RecName: Full=Anthranilate synthase component 1;       ...    34   8.8

>AJ251163_1(AJ251163|pid:none) Dictyostelium discoideum dymB gene for
            dynamin B homologue.
          Length = 920

 Score =  341 bits (875), Expect = 2e-92
 Identities = 195/318 (61%), Positives = 196/318 (61%)
 Frame = +3

Query: 18   KADYSHVLSRFPILKERIVEVSNNALRKLVKECNQSIXQMVDAEMSFINTNHPNYLYQXX 197
            +ADYSHVLSRFPILKERIVEVSNNALRKLVKECNQSI QMVDAEMSFINTNHPNYLYQ
Sbjct: 603  QADYSHVLSRFPILKERIVEVSNNALRKLVKECNQSISQMVDAEMSFINTNHPNYLYQLN 662

Query: 198  XXXXXXXXXXXVVPQGAFXXXXXXXXXXXXXXXXXXXXXXXXXYNDALNPYNIDRCYPID 377
                       VVPQGAF                         YNDALNPYNIDR YPID
Sbjct: 663  NLLFSSSSSSFVVPQGAFQSTSSTSSSPTSSSSSLPLPQNSNPYNDALNPYNIDRSYPID 722

Query: 378  NXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFLSRIFGXXXXXXXXXXXXXXXXXXXXXX 557
            N                            SGFLSRIFG
Sbjct: 723  NQIKQQQQQQQQQQQQSYQQQQQQQQKQQSGFLSRIFGSSSSPPSPPSPPQPKQQQSHEI 782

Query: 558  XXXXXXXXXXXXXXXXXNLIFDDKFKLEQYGLNDITEDEKKQIYLLRRLLLAYNDIAQFN 737
                             NLIFDDKFKLEQYGLNDITEDEKKQIYLLRRLLLAYNDIAQFN
Sbjct: 783  QIQQQQQQQQQQHLKKQNLIFDDKFKLEQYGLNDITEDEKKQIYLLRRLLLAYNDIAQFN 842

Query: 738  LQQNTMKLVSLLLIDKSKDILQKELIDSLYDQSSVDQLLRENELVVAKRNECIYXXXXXX 917
            LQQNTMKLVSLLLIDKSKDILQKELIDSLYDQSSVDQLLRENELVVAKRNECIY
Sbjct: 843  LQQNTMKLVSLLLIDKSKDILQKELIDSLYDQSSVDQLLRENELVVAKRNECIYKLDLLK 902

Query: 918  XXXXXXXXXENSDLLHLY 971
                     ENSDLLHLY
Sbjct: 903  KAKKSLSQSENSDLLHLY 920

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 858,004,991
Number of extensions: 11336927
Number of successful extensions: 26086
Number of sequences better than 10.0: 142
Number of HSP's gapped: 26081
Number of HSP's successfully gapped: 185
Length of query: 329
Length of database: 1,051,180,864
Length adjustment: 129
Effective length of query: 200
Effective length of database: 633,664,753
Effective search space: 126732950600
Effective search space used: 126732950600
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.58  gvh: 0.29  alm: 0.46  top: 0.53  tms: 0.00  mit: 0.21  mip: 0.03
 nuc: 0.08  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: nuclear
	 28.0 %: cytoplasmic
	  8.0 %: cytoskeletal
	  8.0 %: mitochondrial
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for Contig-U12755-1 is nuc
VS (DIR, S) 0
VH (FL, L) 5
VF (FL, S) 0
AH (FL, L) 2
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 2
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0