>Contig-U12751-1 (Contig-U12751-1Q) /CSM_Contig/Contig-U12751-1Q.Seq.d
TATCCAATGAGCGATGTAAATCAAGGGCTCTACAGATGTTTGTTTACCAG
GTTTTGCAAATAAATACGAGTTTAGAGTTATTCATTCAAATCCATCCAAT
AACTCTTTCTCCTTTGTTAGTGAACCACTCAAATTTACATTAACAAGTAA
TTTAATTTGGCATCAAGCTGATTTCCCTTCATTCTCAACTAGAGTTCAAA
CTGTATTGACTCGTTTAGTTCAAATGAGAGCAATTAAACAATTGGTAACC
AAATATGGTAAACAATTAACTAATCTCTCCATCCCATACATTTCAAGAGG
TCCTATTCCAACATGGACTCAAGAAAATGATAAGAGTTTATTAGTTGGTG
TCTATAAACATGGTTATGGAAAATATCCTGAAATTTTCTTTGATCCTGAA
TTAGATTTACTCTCAAATGTAAAGAGAGGTCAACCAAATACTTTTTCACC
AAATCCAACTAGTAATAATGATCAAAATAATAATAATAATAATAATAATA
GCAATCAAAACAATACTGATAATATTGATAGTGATAGCGGTAATAATAAT
AATCAAAACTCTTCAACTAATCAACAACAACAGCAACAGCAATCTGAAAA
GATTCCATCATCCGAATCATTAAGAAGAAGAATCCAAAAGGTTACTGATC
AAATCTGAAAAAAGAACATAGTGATAGATCAGAAACAACATAGGCTCAAC
AAAAACTACATCAATTACAACTACA

est1=AHK752Z,1,722
est2=CHQ160Z,4,726

iq*am*IKGSTDVCLPGFANKYEFRVIHSNPSNNSFSFVSEPLKFTLTSNLIWHQADFPS
FSTRVQTVLTRLVQMRAIKQLVTKYGKQLTNLSIPYISRGPIPTWTQENDKSLLVGVYKH
GYGKYPEIFFDPELDLLSNVKRGQPNTFSPNPTSNNDQNNNNNNNNSNQNNTDNIDSDSG
NNNNQNSSTNQQQQQQQSEKIPSSESLRRRIQKVTDQI*kknividqkqhrlnknyinyn
y

Frame A:
ypmsdvnqglyrclftrfck*irv*sysfksiq*lfllc**ttqiyink*fnlass*fpf
iln*ssncidsfssnesn*tignqiw*tin*slhpihfkrsysnmdsrk**efiswcl*t
wlwkis*nfl*s*irftlkckerstkyfftksn****sk********qskqy**y****r
****sklfn*stttatai*kdsiiriikkknpkgy*snlkkehsdrsett*aqqklhqlq
l


Frame B:
iq*am*IKGSTDVCLPGFANKYEFRVIHSNPSNNSFSFVSEPLKFTLTSNLIWHQADFPS
FSTRVQTVLTRLVQMRAIKQLVTKYGKQLTNLSIPYISRGPIPTWTQENDKSLLVGVYKH
GYGKYPEIFFDPELDLLSNVKRGQPNTFSPNPTSNNDQNNNNNNNNSNQNNTDNIDSDSG
NNNNQNSSTNQQQQQQQSEKIPSSESLRRRIQKVTDQI*kknividqkqhrlnknyinyn
y


Frame C:
snercksralqmfvyqvlqintslelfiqihpitlspllvnhsnlh*qvi*fgiklislh
sqlefkly*lv*fk*eqlnnw*pnmvnn*lispshtfqevlfqhglkkmirvy*lvsinm
vmenilkfsliln*iysqm*revnqilfhqiqlvimikiiiiiiiiaiktiliiliviav
iiiiktlqlinnnsnsnlkrfhhpnh*eeeskrlliksekrt***irnnigstkttsitt
t

Query= Contig-U12751-1 (Contig-U12751-1Q)
/CSM_Contig/Contig-U12751-1Q.Seq.d
         (725 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U12751-1 (Contig-U12751-1Q) /CSM_Contig/Conti...   942  0.0
Contig-U11830-1 (Contig-U11830-1Q) /CSM_Contig/Conti...    46  5e-05
Contig-U14782-1 (Contig-U14782-1Q) /CSM_Contig/Conti...    44  2e-04
Contig-U11968-1 (Contig-U11968-1Q) /CSM_Contig/Conti...    44  2e-04
Contig-U14899-1 (Contig-U14899-1Q) /CSM_Contig/Conti...    42  8e-04
Contig-U12710-1 (Contig-U12710-1Q) /CSM_Contig/Conti...    42  8e-04
Contig-U12392-1 (Contig-U12392-1Q) /CSM_Contig/Conti...    42  8e-04
Contig-U11521-1 (Contig-U11521-1Q) /CSM_Contig/Conti...    42  8e-04
Contig-U11357-1 (Contig-U11357-1Q) /CSM_Contig/Conti...    42  8e-04
Contig-U11179-1 (Contig-U11179-1Q) /CSM_Contig/Conti...    42  8e-04

>Contig-U12751-1 (Contig-U12751-1Q) /CSM_Contig/Contig-U12751-1Q.Seq.d
          Length = 725

 Score =  942 bits (475), Expect = 0.0
 Identities = 475/475 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tatccaatgagcgatgtaaatcaagggctctacagatgtttgtttaccaggttttgcaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tatccaatgagcgatgtaaatcaagggctctacagatgtttgtttaccaggttttgcaaa 60

                                                                       
Query: 61  taaatacgagtttagagttattcattcaaatccatccaataactctttctcctttgttag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  taaatacgagtttagagttattcattcaaatccatccaataactctttctcctttgttag 120

                                                                       
Query: 121 tgaaccactcaaatttacattaacaagtaatttaatttggcatcaagctgatttcccttc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaaccactcaaatttacattaacaagtaatttaatttggcatcaagctgatttcccttc 180

                                                                       
Query: 181 attctcaactagagttcaaactgtattgactcgtttagttcaaatgagagcaattaaaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attctcaactagagttcaaactgtattgactcgtttagttcaaatgagagcaattaaaca 240

                                                                       
Query: 241 attggtaaccaaatatggtaaacaattaactaatctctccatcccatacatttcaagagg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attggtaaccaaatatggtaaacaattaactaatctctccatcccatacatttcaagagg 300

                                                                       
Query: 301 tcctattccaacatggactcaagaaaatgataagagtttattagttggtgtctataaaca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcctattccaacatggactcaagaaaatgataagagtttattagttggtgtctataaaca 360

                                                                       
Query: 361 tggttatggaaaatatcctgaaattttctttgatcctgaattagatttactctcaaatgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tggttatggaaaatatcctgaaattttctttgatcctgaattagatttactctcaaatgt 420

                                                                  
Query: 421 aaagagaggtcaaccaaatactttttcaccaaatccaactagtaataatgatcaa 475
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaagagaggtcaaccaaatactttttcaccaaatccaactagtaataatgatcaa 475


 Score =  446 bits (225), Expect = e-125
 Identities = 225/225 (100%)
 Strand = Plus / Plus

                                                                       
Query: 501 gcaatcaaaacaatactgataatattgatagtgatagcggtaataataataatcaaaact 560
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcaatcaaaacaatactgataatattgatagtgatagcggtaataataataatcaaaact 560

                                                                       
Query: 561 cttcaactaatcaacaacaacagcaacagcaatctgaaaagattccatcatccgaatcat 620
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttcaactaatcaacaacaacagcaacagcaatctgaaaagattccatcatccgaatcat 620

                                                                       
Query: 621 taagaagaagaatccaaaaggttactgatcaaatctgaaaaaagaacatagtgatagatc 680
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taagaagaagaatccaaaaggttactgatcaaatctgaaaaaagaacatagtgatagatc 680

                                                        
Query: 681 agaaacaacataggctcaacaaaaactacatcaattacaactaca 725
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agaaacaacataggctcaacaaaaactacatcaattacaactaca 725


>Contig-U11830-1 (Contig-U11830-1Q) /CSM_Contig/Contig-U11830-1Q.Seq.d
          Length = 971

 Score = 46.1 bits (23), Expect = 5e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 570 atcaacaacaacagcaacagcaa 592
           |||||||||||||||||||||||
Sbjct: 745 atcaacaacaacagcaacagcaa 767


>Contig-U14782-1 (Contig-U14782-1Q) /CSM_Contig/Contig-U14782-1Q.Seq.d
          Length = 557

 Score = 44.1 bits (22), Expect = 2e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 572 caacaacaacagcaacagcaat 593
           ||||||||||||||||||||||
Sbjct: 46  caacaacaacagcaacagcaat 67


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 27,211
Number of Sequences: 6905
Number of extensions: 27211
Number of successful extensions: 11342
Number of sequences better than 10.0: 525
length of query: 725
length of database: 5,674,871
effective HSP length: 16
effective length of query: 709
effective length of database: 5,564,391
effective search space: 3945153219
effective search space used: 3945153219
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

Query= Contig-U12751-1 (Contig-U12751-1Q) /CSM_Contig/Contig-U12751-1Q.Seq.d
         (725 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ385320) Dictyostelium discoideum cDNA clone:ddc54g15, 3' ...   924   0.0    4
(BJ354116) Dictyostelium discoideum cDNA clone:dda52h13, 3' ...   892   0.0    3
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701...    42   0.041  3
(Z75525) Caenorhabditis elegans Cosmid C03D6.                      50   0.12   1
(AC160662) Bos taurus clone CH240-96L13, WORKING DRAFT SEQUE...    50   0.12   1
(CB407455) OSTR091E9_1 AD-wrmcDNA Caenorhabditis elegans cDN...    50   0.12   1
(C65009) Caenorhabditis elegans cDNA clone yk397h8 : 5' end,...    50   0.12   1
(BJ812183) Caenorhabditis elegans cDNA clone:yk1464g12 : 3' ...    50   0.12   1
(BJ779749) Caenorhabditis elegans cDNA clone:yk1415e05 : 3' ...    50   0.12   1
(AC116919) Dictyostelium discoideum chromosome 2 map complem...    46   0.29   4
(AC107443) Rattus norvegicus clone CH230-14N5, *** SEQUENCIN...    48   0.30   2
(AC159007) Mus musculus BAC clone RP23-9O3 from chromosome 1...    48   0.46   1
(AC157650) Mus musculus BAC clone RP24-573N21 from chromosom...    48   0.46   1
(AC122366) Mus musculus BAC clone RP23-447K15 from 14, compl...    48   0.46   1
(AC192974) Pan troglodytes BAC clone CH251-628O2 from chromo...    48   0.46   1
(AP004513) Lotus japonicus genomic DNA, chromosome 5, clone:...    48   0.46   1
(AK113519) Ciona intestinalis cDNA, clone:ciad066o12, full i...    48   0.46   1
(AF474333) Dictyostelium discoideum ABC transporter ABCC.1 (...    48   0.46   1
(AL121869) Human DNA sequence from clone RP13-138P15 on chro...    48   0.46   1
(AC012667) Homo sapiens BAC clone RP11-357C22 from Y, comple...    48   0.46   1
(AC156100) Bos taurus clone CH240-44G8, WORKING DRAFT SEQUEN...    48   0.46   1
(AC123409) Rattus norvegicus clone CH230-347J2, WORKING DRAF...    48   0.46   1
(AC121536) Mus musculus clone RP24-315H19, WORKING DRAFT SEQ...    48   0.46   1
(AP010596) Lotus japonicus genomic DNA, chromosome 5, clone:...    48   0.46   1
(AC173543) Bos taurus clone CH240-92N5, WORKING DRAFT SEQUEN...    48   0.46   1
(EC799947) RAE00012771 Reclinomonas americana Home made, nor...    48   0.46   1
(AM830211) Nicotiana tabacum EST, clone nt006087030.               48   0.46   1
(BW501508) Ciona intestinalis cDNA, clone:cima056p22, 3'end,...    48   0.46   1
(BW500413) Ciona intestinalis cDNA, clone:cima053a12, 3'end,...    48   0.46   1
(BW456831) Ciona intestinalis cDNA, clone:cijv023p24, 3'end,...    48   0.46   1
(BW256305) Ciona intestinalis cDNA, clone:cign010n18, 5' end...    48   0.46   1
(BW161953) Ciona intestinalis cDNA, clone:rcigd044e20, 3' en...    48   0.46   1
(BW156896) Ciona intestinalis cDNA, clone:rcigd030a07, 3' en...    48   0.46   1
(BW150267) Ciona intestinalis cDNA, clone:rcigd012a09, 3' en...    48   0.46   1
(BW126348) Ciona intestinalis cDNA, clone:rcign010n18, 3' en...    48   0.46   1
(BW080579) Ciona intestinalis cDNA, clone:rcieg082l06, 3' en...    48   0.46   1
(BW076485) Ciona intestinalis cDNA, clone:rcieg069g21, 3' en...    48   0.46   1
(BW075251) Ciona intestinalis cDNA, clone:rcieg065e21, 3' en...    48   0.46   1
(BW072766) Ciona intestinalis cDNA, clone:rcieg100e04, 3' en...    48   0.46   1
(BW064748) Ciona intestinalis cDNA, clone:rciad093c06, 3' en...    48   0.46   1
(BW010852) Ciona intestinalis cDNA, clone:rcibd040h06, 3' en...    48   0.46   1
(BJ421311) Dictyostelium discoideum cDNA clone:ddv42n04, 5' ...    48   0.46   1
(BJ418787) Dictyostelium discoideum cDNA clone:ddv34b06, 5' ...    48   0.46   1
(BJ418786) Dictyostelium discoideum cDNA clone:ddv34b05, 5' ...    48   0.46   1
(FK082667) XABT137733.b1 Gateway compatible cien cDNA librar...    48   0.46   1
(FK067104) XABT128119.g1 Gateway compatible cien cDNA librar...    48   0.46   1
(FF789122) XABT85517.rev Gateway compatible cien cDNA librar...    48   0.46   1
(FF768160) XABT71454.rev Gateway compatible cien cDNA librar...    48   0.46   1
(FF754501) XABT61934.rev Gateway compatible cien cDNA librar...    48   0.46   1
(AV906689) Ciona intestinalis cDNA, clone:rciad66o12, 3' end...    48   0.46   1
(DE228297) Trifolium pratense DNA, clone:RCG21160.                 42   0.59   2
(CU856605) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    42   0.69   5
(Z49705) S.cerevisiae chromosome XIII cosmid 8520.                 42   0.81   2
(AC204524) Zea mays chromosome 4 clone ZMMBBb-353J21; ZMMBBb...    40   0.89   4
(BJ979848) Brachionus plicatilis NH1L mRNA, clone: BpA0379, ...    42   1.1    2
(AC186775) Trichinella spiralis chromosome UNK clone TS195-1...    42   1.1    3
(ES468961) PA-D12 Brachionus plicatilis NHIL unnormalized cD...    42   1.1    2
(EY292641) CAWX10669.fwd CAWX Helobdella robusta Primary Ear...    44   1.1    2
(AC191637) Gallus gallus BAC clone CH261-10C15 from chromoso...    40   1.2    5
(AY223037) Schistosoma japonicum clone ZZD1165 mRNA sequence.      40   1.7    2
(EZ000161) TSA: Schistosoma japonicum SJCHGC02841 unknown mRNA.    40   1.8    2
(DQ121034) Hucho taimen clone ZA-30 microsatellite sequence.       46   1.8    1
(CT027787) Zebrafish DNA sequence from clone CH211-12B16 in ...    46   1.8    1
(AC158576) Mus musculus chromosome 7, clone RP24-252B21, com...    46   1.8    1
(AC142262) Mus musculus BAC clone RP24-486I4 from 8, complet...    46   1.8    1
(AC133158) Mus musculus BAC clone RP24-491F15 from 8, comple...    46   1.8    1
(AC129321) Mus musculus BAC clone RP24-160I20 from 8, comple...    46   1.8    1
(AC124700) Mus musculus BAC clone RP24-199L11 from chromosom...    46   1.8    1
(AC118739) Mus musculus chromosome 1, clone RP24-173M4, comp...    46   1.8    1
(AC113498) Mus musculus chromosome 1, clone RP23-366N18, com...    46   1.8    1
(AC099701) Mus musculus chromosome 7, clone RP23-184F6, comp...    46   1.8    1
(EF062854) Candida albicans strain CA1006 RME1 gene, partial...    46   1.8    1
(EF062853) Candida albicans strain 1719 RME1 gene, partial s...    46   1.8    1
(CR380958) Candida glabrata strain CBS138 chromosome L compl...    46   1.8    1
(AP008218) Oryza sativa (japonica cultivar-group) genomic DN...    46   1.8    1
(AL928774) Oryza sativa chromosome 12, . BAC OSJNBa0078O17 o...    46   1.8    1
(AL731884) Oryza sativa chromosome 12, . BAC OSJNBa0014A07 o...    46   1.8    1
(GC527688) Sequence 1198 from patent US 7411051.                   46   1.8    1
(EA744949) Sequence 1198 from patent US 7368531.                   46   1.8    1
(EA737189) Sequence 8635 from patent US 7368527.                   46   1.8    1
(EA732597) Sequence 942 from patent US 7368527.                    46   1.8    1
(EA700490) Sequence 79369 from patent US 7365185.                  46   1.8    1
(DJ131582) Method for identification of useful proteins deri...    46   1.8    1
(CS764701) Sequence 32697 from Patent WO2005083127.                46   1.8    1
(CS741949) Sequence 9945 from Patent WO2005083127.                 46   1.8    1
(BD279365) 26 human secreted proteins.                             46   1.8    1
(BD270367) 50 human secreted proteins.                             46   1.8    1
(AR549664) Sequence 4795 from patent US 6747137.                   46   1.8    1
(AR547305) Sequence 2436 from patent US 6747137.                   46   1.8    1
(AK174954) Ciona intestinalis cDNA, clone:citb068l07, full i...    46   1.8    1
(AB210735) Ciona intestinalis mRNA for transcription factor ...    46   1.8    1
(AL022718) Human DNA sequence from clone RP5-1052M9 on chrom...    46   1.8    1
(AC068492) Homo sapiens BAC clone RP11-809C23 from 2, comple...    46   1.8    1
(AC122681) Rattus norvegicus clone CH230-45G23, *** SEQUENCI...    46   1.8    1
(AC096903) Rattus norvegicus clone CH230-56K10, WORKING DRAF...    46   1.8    1
(AC201151) Strongylocentrotus purpuratus clone R3-14E9, WORK...    46   1.8    1
(AC192118) Pan troglodytes chromosome X clone CH251-700J19, ...    46   1.8    1
(AC181661) Strongylocentrotus purpuratus clone R3-10E9, WORK...    46   1.8    1
(AC181617) Bos taurus clone CH240-512G6, WORKING DRAFT SEQUE...    46   1.8    1
(AC181051) Strongylocentrotus purpuratus clone R3-3050L15, W...    46   1.8    1

>(BJ385320) Dictyostelium discoideum cDNA clone:ddc54g15, 3' end,
           single read.
          Length = 723

 Score =  924 bits (466), Expect(4) = 0.0
 Identities = 470/472 (99%)
 Strand = Plus / Minus


Query: 4   ccaatgagcgatgtaaatcaagggctctacagatgtttgtttaccaggttttgcaaataa 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 ccaatgagcgatgtaaatcaagggctctacagatgtttgtttaccaggttttgcaaataa 664


Query: 64  atacgagtttagagttattcattcaaatccatccaataactctttctcctttgttagtga 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 atacgagtttagagttattcattcaaatccatccaataactctttctcctttgttagtga 604


Query: 124 accactcaaatttacattaacaagtaatttaatttggcatcaagctgatttcccttcatt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 603 accactcaaatttacattaacaagtaatttaatttggcatcaagctgatttccnttcatt 544


Query: 184 ctcaactagagttcaaactgtattgactcgtttagttcaaatgagagcaattaaacaatt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ctcaactagagttcaaactgtattgactcgtttagttcaaatgagagcaattaaacaatt 484


Query: 244 ggtaaccaaatatggtaaacaattaactaatctctccatcccatacatttcaagaggtcc 303
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ggtaaccaaatatggtaaacaattaactaatctctccatcccatacatttcaagaggtcn 424


Query: 304 tattccaacatggactcaagaaaatgataagagtttattagttggtgtctataaacatgg 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tattccaacatggactcaagaaaatgataagagtttattagttggtgtctataaacatgg 364


Query: 364 ttatggaaaatatcctgaaattttctttgatcctgaattagatttactctcaaatgtaaa 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ttatggaaaatatcctgaaattttctttgatcctgaattagatttactctcaaatgtaaa 304


Query: 424 gagaggtcaaccaaatactttttcaccaaatccaactagtaataatgatcaa 475
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gagaggtcaaccaaatactttttcaccaaatccaactagtaataatgatcaa 252

 Score =  182 bits (92), Expect(4) = 0.0
 Identities = 92/92 (100%)
 Strand = Plus / Minus


Query: 554 caaaactcttcaactaatcaacaacaacagcaacagcaatctgaaaagattccatcatcc 613
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 caaaactcttcaactaatcaacaacaacagcaacagcaatctgaaaagattccatcatcc 114


Query: 614 gaatcattaagaagaagaatccaaaaggttac 645
           ||||||||||||||||||||||||||||||||
Sbjct: 113 gaatcattaagaagaagaatccaaaaggttac 82

 Score = 97.6 bits (49), Expect(4) = 0.0
 Identities = 49/49 (100%)
 Strand = Plus / Minus


Query: 677 gatcagaaacaacataggctcaacaaaaactacatcaattacaactaca 725
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50  gatcagaaacaacataggctcaacaaaaactacatcaattacaactaca 2

 Score = 52.0 bits (26), Expect(4) = 0.0
 Identities = 26/26 (100%)
 Strand = Plus / Minus


Query: 647 gatcaaatctgaaaaaagaacatagt 672
           ||||||||||||||||||||||||||
Sbjct: 81  gatcaaatctgaaaaaagaacatagt 56

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 798,862,572
Number of extensions: 51261645
Number of successful extensions: 4612978
Number of sequences better than 10.0: 384
Length of query: 725
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 701
Effective length of database: 97,308,875,965
Effective search space: 68213522051465
Effective search space used: 68213522051465
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

Query= Contig-U12751-1 (Contig-U12751-1Q) /CSM_Contig/Contig-U12751-1Q.Seq.d
         (725 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE017349_101(AE017349|pid:none) Cryptococcus neoformans var. neo...    49   1e-04
CR954201_555(CR954201|pid:none) Ostreococcus tauri strain OTTH05...    49   2e-04
AB037837_1(AB037837|pid:none) Homo sapiens mRNA for KIAA1416 pro...    48   4e-04
(A2AJK6) RecName: Full=Chromodomain-helicase-DNA-binding protein...    48   4e-04
AK295751_1(AK295751|pid:none) Homo sapiens cDNA FLJ57840 complet...    48   4e-04
BC168549_1(BC168549|pid:none) Xenopus tropicalis cDNA clone MGC:...    47   8e-04
(B5DE69) RecName: Full=Chromodomain-helicase-DNA-binding protein...    47   8e-04
(Q8TBR9) RecName: Full=Chromodomain-helicase-DNA-binding protein...    46   0.001
BC156439_1(BC156439|pid:none) Synthetic construct Homo sapiens c...    46   0.001
BC168553_1(BC168553|pid:none) Xenopus tropicalis chromodomain he...    46   0.001
(Q9JIX5) RecName: Full=Chromodomain-helicase-DNA-binding protein...    46   0.001
(Q09XV5) RecName: Full=Chromodomain-helicase-DNA-binding protein...    46   0.001
AB046784_1(AB046784|pid:none) Homo sapiens mRNA for KIAA1564 pro...    46   0.001
AL590430_1(AL590430|pid:none) Mouse DNA sequence from clone RP23...    45   0.002
(Q9H6D4) RecName: Full=Chromodomain-helicase-DNA-binding protein...    45   0.002
AE016820_492(AE016820|pid:none) Ashbya gossypii (= Eremothecium ...    45   0.002
AL031667_6(AL031667|pid:none) Human DNA sequence from clone RP4-...    45   0.002
BC150806_1(BC150806|pid:none) Mus musculus chromodomain helicase...    45   0.002
AB037756_1(AB037756|pid:none) Homo sapiens mRNA for KIAA1335 pro...    45   0.002
AY647157_1(AY647157|pid:none) Homo sapiens KISH2 (KISH2) mRNA, c...    45   0.003
DQ333316_1(DQ333316|pid:none) Homo sapiens PRIC320 isoform 1 mRN...    45   0.003
(Q3L8U1) RecName: Full=Chromodomain-helicase-DNA-binding protein...    45   0.003
(Q8BYH8) RecName: Full=Chromodomain-helicase-DNA-binding protein...    45   0.003
AY243501_1(AY243501|pid:none) Homo sapiens chromatin remodeling ...    45   0.003
DQ059482_1(DQ059482|pid:none) Homo sapiens ciprofibrate bound pr...    45   0.003
AF004397_1(AF004397|pid:none) Gallus gallus chromo-helicase-DNA-...    42   0.015
AF181828_1(AF181828|pid:none) Nymphicus hollandicus chromosome Z...    42   0.019
AF060702_1(AF060702|pid:none) Struthio camelus clone 3737 chromo...    42   0.019
AF181824_1(AF181824|pid:none) Aegolius funereus chromosome W chr...    42   0.019
AY217131_1(AY217131|pid:none) Taeniopygia guttata chromo-helicas...    42   0.019
(O14646) RecName: Full=Chromodomain-helicase-DNA-binding protein...    42   0.025
AP008213_1862(AP008213|pid:none) Oryza sativa (japonica cultivar...    42   0.025
BC115822_1(BC115822|pid:none) Mus musculus chromodomain helicase...    42   0.025
(P40201) RecName: Full=Chromodomain-helicase-DNA-binding protein...    42   0.025
CP001334_203(CP001334|pid:none) Micromonas sp. RCC299 chromosome...    42   0.025
BC117134_1(BC117134|pid:none) Homo sapiens chromodomain helicase...    42   0.025
FJ515838_1(FJ515838|pid:none) Homo sapiens isolate CHD2-VI-T chr...    41   0.033
AF006514_1(AF006514|pid:none) Homo sapiens CHD2 mRNA, complete c...    41   0.033
CU928174_486(CU928174|pid:none) Zygosaccharomyces rouxii strain ...    41   0.043
FN392320_97(FN392320|pid:none) Pichia pastoris GS115 chromosome ...    40   0.056
AP007169_330(AP007169|pid:none) Aspergillus oryzae RIB40 genomic...    40   0.073
CU633901_345(CU633901|pid:none) Podospora anserina genomic DNA c...    40   0.073
AK118533_1(AK118533|pid:none) Arabidopsis thaliana At1g17520 mRN...    40   0.096
AC022492_23(AC022492|pid:none) Genomic sequence for Arabidopsis ...    40   0.096
AM270162_16(AM270162|pid:none) Aspergillus niger contig An08c007...    39   0.13
Z92970_2(Z92970|pid:none) Caenorhabditis elegans Fosmid H06O01, ...    39   0.16
CU633899_596(CU633899|pid:none) Podospora anserina genomic DNA c...    39   0.16
T23056(T23056)chromodomain helicase H06O01.2 - Caenorhabditis el...    39   0.16
CR380958_504(CR380958|pid:none) Candida glabrata strain CBS138 c...    39   0.16
(B0R0I6) RecName: Full=Chromodomain-helicase-DNA-binding protein...    39   0.21
AL928674_21(AL928674|pid:none) Zebrafish DNA sequence from clone...    39   0.21
FN357317_37(FN357317|pid:none) Schistosoma mansoni genome sequen...    39   0.21
AC141111_14(AC141111|pid:none) Medicago truncatula clone mth2-20...    38   0.28
AY087994_1(AY087994|pid:none) Arabidopsis thaliana clone 40229 m...    38   0.28
U83624_1(U83624|pid:none) Arabidopsis thaliana telomere repeat b...    38   0.28
CU928171_608(CU928171|pid:none) Kluyveromyces thermotolerans str...    38   0.28
DQ074477_1(DQ074477|pid:none) Malus x domestica MYBR6 mRNA, comp...    38   0.36
AE014185_229(AE014185|pid:none) Plasmodium falciparum 3D7 chromo...    37   0.48
CP000500_338(CP000500|pid:none) Pichia stipitis CBS 6054 chromos...    37   0.48
AM910988_83(AM910988|pid:none) Plasmodium knowlesi strain H chro...    37   0.62
B84645(B84645)hypothetical protein At2g25170 [imported] - Arabid...    37   0.62
AK229409_1(AK229409|pid:none) Arabidopsis thaliana mRNA for puta...    37   0.62
(Q9S775) RecName: Full=CHD3-type chromatin-remodeling factor PIC...    37   0.62
DQ822930_1(DQ822930|pid:none) Glycine max MYB transcription fact...    37   0.81
AP003243_7(AP003243|pid:none) Oryza sativa Japonica Group genomi...    37   0.81
AP008207_1710(AP008207|pid:none) Oryza sativa (japonica cultivar...    37   0.81
AM488806_2(AM488806|pid:none) Vitis vinifera contig VV78X159179....    37   0.81
FJ887038_1(FJ887038|pid:none) Carica papaya MYB mRNA, complete c...    36   1.1
BC152522_1(BC152522|pid:none) Danio rerio similar to telomeric r...    36   1.4
AE014134_63(AE014134|pid:none) Drosophila melanogaster chromosom...    36   1.4
BC134180_1(BC134180|pid:none) Danio rerio similar to telomeric r...    36   1.4
AE014134_62(AE014134|pid:none) Drosophila melanogaster chromosom...    36   1.4
AK100618_1(AK100618|pid:none) Oryza sativa Japonica Group cDNA c...    35   1.8
U83837_1(U83837|pid:none) Arabidopsis thaliana telomere repeat b...    35   1.8
(O14139) RecName: Full=Chromodomain helicase hrp3;          EC=3...    35   2.4
(Q9US25) RecName: Full=Chromodomain helicase hrp1;          EC=3...    35   3.1
AY280631_1(AY280631|pid:none) Zea mays Single myb histone 4 (Smh...    35   3.1
AY095050_1(AY095050|pid:none) Drosophila melanogaster LD39323 fu...    35   3.1
AF461815_1(AF461815|pid:none) Zea mays histone H1-like protein (...    35   3.1
BT011071_1(BT011071|pid:none) Drosophila melanogaster SD21488 fu...    35   3.1
AY280632_1(AY280632|pid:none) Zea mays single myb histone 6 (Smh...    35   3.1
BT062059_1(BT062059|pid:none) Zea mays full-length cDNA clone ZM...    35   3.1
AY280630_1(AY280630|pid:none) Zea mays single myb histone 5 (Smh...    34   4.0
EU962720_1(EU962720|pid:none) Zea mays clone 244954 single myb h...    34   4.0
AJ495797_1(AJ495797|pid:none) Oryza sativa (japonica cultivar-gr...    34   4.0
FN357585_11(FN357585|pid:none) Schistosoma mansoni genome sequen...    34   5.3
AB016874_14(AB016874|pid:none) Arabidopsis thaliana genomic DNA,...    34   5.3
EU021050_1(EU021050|pid:none) Brassica napus baby boom-interacti...    34   5.3
CP001326_53(CP001326|pid:none) Micromonas sp. RCC299 chromosome ...    33   6.9
(Q14839) RecName: Full=Chromodomain-helicase-DNA-binding protein...    33   9.0
(Q6PDQ2) RecName: Full=Chromodomain-helicase-DNA-binding protein...    33   9.0
AK220473_1(AK220473|pid:none) Mus musculus mRNA for mKIAA4075 pr...    33   9.0
BC006035_1(BC006035|pid:none) Mus musculus chromodomain helicase...    33   9.0

>AE017349_101(AE017349|pid:none) Cryptococcus neoformans var.
            neoformans JEC21 chromosome 9, complete sequence.
          Length = 1519

 Score = 49.3 bits (116), Expect = 1e-04
 Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
 Frame = +2

Query: 185  STRVQTVLTRLVQMRAIKQLVTKYGKQLTNLSIPYISRGPIPTWTQE----NDKSLLVGV 352
            S   +TV+ R  +++A+ +   +  +   + +IP+ S  P   WT E     D  LLVG+
Sbjct: 1182 SINAETVVARYYELKALVEHFKRV-EDFPSYTIPHDSLKPTMNWTVEWTAREDSQLLVGI 1240

Query: 353  YKHGYGKYPEIFFDPELDL 409
            +KHG+G +  I  DPEL L
Sbjct: 1241 WKHGFGSWEAIAHDPELHL 1259

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 904,578,350
Number of extensions: 14839910
Number of successful extensions: 28312
Number of sequences better than 10.0: 93
Number of HSP's gapped: 28307
Number of HSP's successfully gapped: 93
Length of query: 241
Length of database: 1,051,180,864
Length adjustment: 125
Effective length of query: 116
Effective length of database: 646,610,989
Effective search space: 75006874724
Effective search space used: 75006874724
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)

 psg: 0.84  gvh: 0.35  alm: 0.49  top: 0.57  tms: 0.00  mit: 0.21  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: cytoplasmic
	 32.0 %: nuclear
	  8.0 %: cytoskeletal
	  4.0 %: mitochondrial
	  4.0 %: endoplasmic reticulum

>> prediction for Contig-U12751-1 is cyt