| Contig-U12706-1 |
| Contig ID |
Contig-U12706-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
1027 |
| Chromosome number (1..6, M) |
4 |
| Chromosome length |
5430582 |
| Start point |
119578 |
| End point |
120604 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
10 |
| Number of EST |
10 |
| Link to clone list |
U12706 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.12. 2 |
| Homology vs DNA |
Query= Contig-U12706-1 (Contig-U12706-1Q) /CSM_Contig/Contig-U12706-1Q.Seq.d
(1027 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ394719) Dictyostelium discoideum cDNA clone:dds36a12, 5' ... 664 0.0 3
(BJ392906) Dictyostelium discoideum cDNA clone:dds29j09, 5' ... 408 0.0 4
(BJ421789) Dictyostelium discoideum cDNA clone:ddv43h22, 5' ... 408 0.0 4
(BJ333995) Dictyostelium discoideum cDNA clone:dda44b23, 5' ... 498 0.0 3
(BJ362157) Dictyostelium discoideum cDNA clone:ddc20e13, 5' ... 478 0.0 3
(BJ339244) Dictyostelium discoideum cDNA clone:dda64l13, 5' ... 408 0.0 4
(BJ334283) Dictyostelium discoideum cDNA clone:dda45d24, 5' ... 408 0.0 4
(BJ394856) Dictyostelium discoideum cDNA clone:dds36b21, 5' ... 408 0.0 4
(BJ339601) Dictyostelium discoideum cDNA clone:dda65m20, 5' ... 408 0.0 4
(BJ339459) Dictyostelium discoideum cDNA clone:dda65n07, 5' ... 408 0.0 4
(BF647566) NF011E09EC1F1069 Elicited cell culture Medicago t... 46 3e-06 2
(BP887023) Solanum lycopersicum cDNA, clone: FA36AE04, 5' en... 48 5e-05 2
(CC070518) CSU-K33r.26L3.SP6 CSU-K33r Aedes aegypti genomic ... 56 0.003 1
(AP000437) Homo sapiens genomic DNA, chromosome 11 clone:CMB... 54 0.011 1
(AC208057) Homo sapiens FOSMID clone ABC9-45484200D9 from ch... 54 0.011 1
(AC090384) Homo sapiens chromosome 11 clone RP11-727C13 map ... 54 0.011 1
(AC006410) Homo sapiens chromosome 11 clone PAC pDJ59L21 map... 54 0.011 1
(EC064308) 338751 CK01 Drosophila melanogaster cDNA clone 81... 54 0.011 1
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 38 0.026 12
(EU446704) Synthetic construct Homo sapiens clone IMAGE:1000... 52 0.042 1
(EA072269) Sequence 9 from patent US 7183051. 52 0.042 1
(AX822005) Sequence 133 from Patent WO03068961. 52 0.042 1
(U66565) Oryctolagus cuniculus RUSH-1beta mRNA, complete cds. 52 0.042 1
(U66564) Oryctolagus cuniculus RUSH-1alpha mRNA, complete cds. 52 0.042 1
(Z46606) H.sapiens HLTF gene for helicase-like transcription... 52 0.042 1
(L34673) Human ATPase, DNA-binding protein (HIP116) mRNA, 3'... 52 0.042 1
(BC044659) Homo sapiens helicase-like transcription factor, ... 52 0.042 1
(BC030976) Homo sapiens helicase-like transcription factor, ... 52 0.042 1
(BC015498) Homo sapiens helicase-like transcription factor, ... 52 0.042 1
(BC005260) Homo sapiens helicase-like transcription factor, ... 52 0.042 1
(AK291231) Homo sapiens cDNA FLJ76830 complete cds, highly s... 52 0.042 1
(AB209052) Homo sapiens mRNA for SWI/SNF-related matrix-asso... 52 0.042 1
(DQ046472) Pan troglodytes SMARCA3 gene, VIRTUAL TRANSCRIPT,... 52 0.042 1
(DQ046471) Homo sapiens SMARCA3 gene, VIRTUAL TRANSCRIPT, pa... 52 0.042 1
(DA802079) Homo sapiens cDNA clone OCBBF3006425, 5' end, mRN... 52 0.042 1
(DA112997) Homo sapiens cDNA clone BRACE3031086, 5' end, mRN... 52 0.042 1
(CV874246) PDUts1124F05 Porcine testis cDNA library I Sus sc... 52 0.042 1
(CU465030) SSH library morulae embryo subtracted from blasto... 52 0.042 1
(CJ400681) Molgula tectiformis cDNA, gonad clone:mtgd012o02,... 52 0.042 1
(CJ397717) Molgula tectiformis cDNA, gonad clone:mtgd001b02,... 52 0.042 1
(CJ382746) Molgula tectiformis cDNA, gastrula/neurula clone:... 52 0.042 1
(CJ357325) Molgula tectiformis cDNA, cleaving embryo clone:m... 52 0.042 1
(CJ347020) Molgula tectiformis cDNA, cleaving embryo clone:m... 52 0.042 1
(AI971472) wq86g11.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone I... 52 0.042 1
(BX327018) human full-length cDNA 5-PRIME end of clone CS0DC... 52 0.042 1
(BU430038) UI-HF-BN0-aer-b-01-0-UI.r1 NIH_MGC_50 Homo sapien... 52 0.042 1
(BQ424511) AGENCOURT_7919471 NIH_MGC_72 Homo sapiens cDNA cl... 52 0.042 1
(CP000891) Shewanella baltica OS195, complete genome. 52 0.042 1
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ... 38 0.13 7
(CR382401) Plasmodium falciparum chromosome 6, complete sequ... 34 0.14 11
(CP000502) Pichia stipitis CBS 6054 chromosome 8, complete s... 50 0.17 1
(CQ600000) Sequence 27758 from Patent WO0171042. 50 0.17 1
(CQ599999) Sequence 27757 from Patent WO0171042. 50 0.17 1
(CQ584871) Sequence 12629 from Patent WO0171042. 50 0.17 1
(CQ584870) Sequence 12628 from Patent WO0171042. 50 0.17 1
(M85049) Drosophila melanogaster brahma protein mRNA, comple... 50 0.17 1
(BT009972) Drosophila melanogaster RE61274 full insert cDNA. 50 0.17 1
(AY095048) Drosophila melanogaster LD36356 full insert cDNA. 50 0.17 1
(AE014296) Drosophila melanogaster chromosome 3L, complete s... 50 0.17 1
(AC093499) Drosophila melanogaster 3L BAC RP98-18K24 (Roswel... 50 0.17 1
(AC014424) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 50 0.17 1
(ER525677) 1093015634754 Global-Ocean-Sampling_GS-35-01-01-1... 50 0.17 1
(AL405341) T7 end of clone AU0AA003G11 of library AU0AA from... 50 0.17 1
(EC213892) 354770 CK01 Drosophila melanogaster cDNA clone 10... 50 0.17 1
(EC068855) 19263 CK01 Drosophila melanogaster cDNA clone CK0... 50 0.17 1
(EC063493) 317313 CK01 Drosophila melanogaster cDNA clone 70... 50 0.17 1
(EB827589) 1150088 KZ03 Plodia interpunctella cDNA clone 585... 50 0.17 1
(CO325648) EK197027.5prime Exelixis FlyTag CK01 pCDNA-SK+ Dr... 50 0.17 1
(CO313013) EK230933.5prime Exelixis FlyTag CK01 pCDNA-SK+ Dr... 50 0.17 1
(CO284534) EK166242.5prime Exelixis FlyTag CK01 pCDNA-SK+ Dr... 50 0.17 1
(CO186591) EK021355.5prime Exelixis FlyTag CK01 pCDNA-SK+ Dr... 50 0.17 1
(BP953871) Euphorbia tirucalli mRNA, clone: ETC011C10, 5' end. 50 0.17 1
(AA264495) LD08257.5prime LD Drosophila melanogaster embryo ... 50 0.17 1
(AE014299) Shewanella oneidensis MR-1, complete genome. 50 0.17 1
(AC203096) Zea mays chromosome 5 clone CH201-203A6; ZMMBBc02... 38 0.37 2
(AC155590) Zea mays strain B73 clone ZMMBBc0203A06, *** SEQU... 38 0.37 2
(CU138508) Zebrafish DNA sequence from clone CH211-218N12 in... 34 0.37 2
(AC210721) Zea mays chromosome 5 clone ZMMBBb-28L24; ZMMBBb0... 38 0.37 2
(U41013) Caenorhabditis elegans cosmid T06C10, complete sequ... 46 0.46 3
(EJ557752) 1092959517503 Global-Ocean-Sampling_GS-29-01-01-1... 36 0.48 2
(EJ551688) 1092959454736 Global-Ocean-Sampling_GS-29-01-01-1... 36 0.48 2
(BZ538819) OGAFQ56TC ZM2_0.7_1.5_KB Zea mays genomic clone Z... 38 0.48 2
(AL929459) Zebrafish DNA sequence from clone CH211-277I17 in... 48 0.66 1
(X99021) S.pombe hrp1+ gene. 48 0.66 1
(CU329670) Schizosaccharomyces pombe chromosome I. 48 0.66 1
(AM448190) Vitis vinifera contig VV78X033259.24, whole genom... 48 0.66 1
(AC151527) Medicago truncatula clone mth2-135i19, complete s... 48 0.66 1
(AC112559) Rattus norvegicus clone CH230-204L20, WORKING DRA... 48 0.66 1
(AC103029) Rattus norvegicus clone CH230-203F15, *** SEQUENC... 48 0.66 1
(AC095690) Rattus norvegicus clone CH230-9C23, *** SEQUENCIN... 48 0.66 1
(DX385383) Diversa 1104 Library 1 724704_F Library1 Area3 FB... 48 0.66 1
(CU801880) A BAC library has been constructed from PN40024 g... 48 0.66 1
(ES740201) HTAB-aab36h05.b1 Heterorhabditis_bacteriophora_HT... 48 0.66 1
(EW965948) BRHL_05_N13_T7 Headlice composite library with al... 48 0.66 1
(AC090140) Homo sapiens chromosome 8 clone RP11-125F4 map 8,... 42 0.72 2
(AF303741) Chilo iridescent virus complete genome. 36 0.75 8
(AM471953) Vitis vinifera contig VV78X231113.3, whole genome... 40 1.1 3
(EV433404) 211357402 NVP Nasonia vitripennis cDNA clone 235C... 38 1.2 3
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 38 1.2 9
(AC201524) Strongylocentrotus purpuratus clone R3-3090A18, W... 32 1.4 2
>(BJ394719) Dictyostelium discoideum cDNA clone:dds36a12, 5' end,
single read.
Length = 589
Score = 664 bits (335), Expect(3) = 0.0
Identities = 335/335 (100%)
Strand = Plus / Plus
Query: 693 ggcaccaattctagcagcagctcatagaccaaaaggatttcaagtaccagtgaagggatt 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ggcaccaattctagcagcagctcatagaccaaaaggatttcaagtaccagtgaagggatt 314
Query: 753 ggagaaagcagtacgtctttccaaaccattacataacccattggcacccaattcattggt 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ggagaaagcagtacgtctttccaaaccattacataacccattggcacccaattcattggt 374
Query: 813 attgtttacaccagtcgatatcactggtgagaatagaattcattgtgttgtagatcctat 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 attgtttacaccagtcgatatcactggtgagaatagaattcattgtgttgtagatcctat 434
Query: 873 attatcacaaaaacttagaccacatcaaagggagggtgttcaattcatgtttgattgttt 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 attatcacaaaaacttagaccacatcaaagggagggtgttcaattcatgtttgattgttt 494
Query: 933 gttgggatttagaggtggtttcaaaggtaatggttgtattttagccgatgatatgggttt 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gttgggatttagaggtggtttcaaaggtaatggttgtattttagccgatgatatgggttt 554
Query: 993 gggtaaatcaattcaagcgatcactatcctttgga 1027
|||||||||||||||||||||||||||||||||||
Sbjct: 555 gggtaaatcaattcaagcgatcactatcctttgga 589
Score = 309 bits (156), Expect(3) = 0.0
Identities = 159/160 (99%)
Strand = Plus / Plus
Query: 500 gcaaaggtcaatatcaaaaagtaatgattaaaaagaaggaagtttattttcaagaggatt 559
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 62 gcaaaggtcaatatcaaaaagtaatgattaaaaagaaggaaatttattttcaagaggatt 121
Query: 560 ttgcaatggcaattggtaataaatggataaagattattttatcagttggtgaagaagagt 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ttgcaatggcaattggtaataaatggataaagattattttatcagttggtgaagaagagt 181
Query: 620 ttaagaatggttcaatctttttgaagacagatagtattat 659
||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ttaagaatggttcaatctttttgaagacagatagtattat 221
Score = 85.7 bits (43), Expect(3) = 0.0
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 439 attgaaggtagacaaattggtaaaactggtttaacaagaagta 481
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attgaaggtagacaaattggtaaaactggtttaacaagaagta 43
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,169,472,539
Number of extensions: 74062443
Number of successful extensions: 6407452
Number of sequences better than 10.0: 208
Length of query: 1027
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1003
Effective length of database: 97,308,875,965
Effective search space: 97600802592895
Effective search space used: 97600802592895
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7. 4 |
| Homology vs Protein |
Query= Contig-U12706-1 (Contig-U12706-1Q) /CSM_Contig/Contig-U12706-1Q.Seq.d
(1027 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069599_1(AY069599|pid:none) Drosophila melanogaster LD35220 fu... 103 7e-21
AM269987_12(AM269987|pid:none) Aspergillus niger contig An01c040... 100 6e-20
AP007151_1036(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 97 9e-19
CP001575_488(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 93 2e-17
BC166345_1(BC166345|pid:none) Xenopus tropicalis RAD54 homolog B... 90 1e-16
BC072215_1(BC072215|pid:none) Xenopus laevis hypothetical protei... 90 1e-16
BC021643_1(BC021643|pid:none) Mus musculus RAD54 like (S. cerevi... 90 1e-16
(O12944) RecName: Full=DNA repair and recombination protein RAD5... 90 1e-16
BC046050_1(BC046050|pid:none) Danio rerio RAD54-like (S. cerevis... 90 1e-16
X97795_1(X97795|pid:none) H.sapiens mRNA homologous to S. cerevi... 89 2e-16
(Q92698) RecName: Full=DNA repair and recombination protein RAD5... 89 2e-16
AK088876_1(AK088876|pid:none) Mus musculus 2 days neonate thymus... 89 3e-16
(P70270) RecName: Full=DNA repair and recombination protein RAD5... 89 3e-16
X97796_1(X97796|pid:none) M.musculus mRNA homologous to S. cerev... 88 4e-16
CP001323_315(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 88 4e-16
CR954208_386(CR954208|pid:none) Ostreococcus tauri strain OTTH05... 86 3e-15
AM460282_5(AM460282|pid:none) Vitis vinifera contig VV78X085811.... 85 5e-15
AM494961_78(AM494961|pid:none) Leishmania braziliensis chromosom... 84 6e-15
S62418(S62418)hypothetical protein SPAC22F3.03c - fission yeast ... 84 8e-15
(Q09772) RecName: Full=Meiotic recombination protein rdh54; ... 84 8e-15
T38188(T38188)probable DNA repair helicase - fission yeast (Sch... 84 8e-15
BC067986_1(BC067986|pid:none) Xenopus tropicalis RAD54-like (S. ... 84 8e-15
AB091330_1(AB091330|pid:none) Magnaporthe grisea rhm54 gene for ... 84 1e-14
(Q9Y620) RecName: Full=DNA repair and recombination protein RAD5... 82 2e-14
AB250666_1(AB250666|pid:none) Arabidopsis thaliana AtRAD54 mRNA ... 80 1e-13
AP000419_13(AP000419|pid:none) Arabidopsis thaliana genomic DNA,... 80 1e-13
CP000589_317(CP000589|pid:none) Ostreococcus lucimarinus CCE9901... 79 2e-13
AB032901_1(AB032901|pid:none) Neurospora crassa mus-25 gene for ... 78 6e-13
CR954209_353(CR954209|pid:none) Ostreococcus tauri strain OTTH05... 77 7e-13
BX088700_99(BX088700|pid:none) DNA centromeric region sequence f... 77 1e-12
AL844507_32(AL844507|pid:none) Plasmodium falciparum 3D7 chromos... 77 1e-12
AP005002_19(AP005002|pid:none) Oryza sativa Japonica Group genom... 76 2e-12
AM910983_149(AM910983|pid:none) Plasmodium knowlesi strain H chr... 75 3e-12
FN392319_1509(FN392319|pid:none) Pichia pastoris GS115 chromosom... 75 5e-12
CR382126_514(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 73 2e-11
CR380959_82(CR380959|pid:none) Candida glabrata strain CBS138 ch... 73 2e-11
(P38086) RecName: Full=DNA repair and recombination protein RDH5... 70 9e-11
AE016820_159(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 70 9e-11
AF069780_1(AF069780|pid:none) Drosophila melanogaster RAD54 DNA ... 70 9e-11
S45466(S45466;S45936;S59706;S39223) probable DNA repair protein ... 70 9e-11
(P41410) RecName: Full=DNA repair protein rhp54; EC=3.6... 67 8e-10
S41886(S41886;T37703;S41444) DNA repair protein - fission yeast ... 67 8e-10
AP007155_353(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 66 2e-09
CU928167_206(CU928167|pid:none) Kluyveromyces thermotolerans str... 66 2e-09
AB168179_1(AB168179|pid:none) Macaca fascicularis testis cDNA cl... 66 2e-09
CR382131_1006(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 65 3e-09
AE017344_279(AE017344|pid:none) Cryptococcus neoformans var. neo... 65 4e-09
FN392321_223(FN392321|pid:none) Pichia pastoris GS115 chromosome... 64 1e-08
CR382128_285(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 63 1e-08
FM992688_1248(FM992688|pid:none) Candida dubliniensis CD36 chrom... 62 4e-08
AM920437_192(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 61 7e-08
FN357342_14(FN357342|pid:none) Schistosoma mansoni genome sequen... 60 9e-08
AL117204_10(AL117204|pid:none) Caenorhabditis elegans YAC Y116A8... 59 3e-07
CU928178_201(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 58 5e-07
CP000589_113(CP000589|pid:none) Ostreococcus lucimarinus CCE9901... 54 7e-06
AP008216_759(AP008216|pid:none) Oryza sativa (japonica cultivar-... 53 2e-05
AC034258_15(AC034258|pid:none) Oryza sativa chromosome 10 BAC OS... 53 2e-05
DQ075464_1(DQ075464|pid:none) Macropus eugenii ATRY (ATRY) mRNA,... 52 3e-05
AM270386_18(AM270386|pid:none) Aspergillus niger contig An17c004... 52 3e-05
AL109753_1(AL109753|pid:none) Human DNA sequence from clone RP5-... 51 7e-05
(Q9H0Z1) RecName: Full=Transcriptional regulator ATRX; ... 51 7e-05
AK161784_1(AK161784|pid:none) Mus musculus 13 days embryo foreli... 51 7e-05
U75653_1(U75653|pid:none) Human zinc finger helicase (Znf-HX) mR... 51 7e-05
AB102641_1(AB102641|pid:none) Homo sapiens ATRX mRNA, complete c... 51 7e-05
(Q61687) RecName: Full=Transcriptional regulator ATRX; ... 51 7e-05
AB209545_1(AB209545|pid:none) Homo sapiens mRNA for transcriptio... 51 7e-05
AL109753_2(AL109753|pid:none) Human DNA sequence from clone RP5-... 51 7e-05
I38614(I38614) helicase II - human &U09820_1(U09820|pid:none) 51 7e-05
AF217319_1(AF217319|pid:none) Mus musculus putative repair and r... 50 1e-04
FJ362379_7(FJ362379|pid:none) Caenorhabditis sp. PS1010 contig J... 50 1e-04
BC149495_1(BC149495|pid:none) Bos taurus hypothetical LOC789977,... 49 2e-04
AF000196_11(AF000196|pid:none) Caenorhabditis elegans cosmid B00... 49 4e-04
BC024298_1(BC024298|pid:none) Homo sapiens RAD54-like 2 (S. cere... 48 5e-04
AB018352_1(AB018352|pid:none) Homo sapiens mRNA for KIAA0809 pro... 48 5e-04
AE017226_6(AE017226|pid:none) Treponema denticola ATCC 35405, co... 47 8e-04
(Q8MNV7) RecName: Full=Putative SMARCAL1-like protein; ... 47 8e-04
U41534_10(U41534|pid:none) Caenorhabditis elegans cosmid C16A3, ... 47 8e-04
U41534_11(U41534|pid:none) Caenorhabditis elegans cosmid C16A3, ... 47 8e-04
(A2BGR3) RecName: Full=DNA excision repair protein ERCC-6-like; ... 47 0.001
T00713(T00713)helicase homolog F22O13.8 - Arabidopsis thaliana 47 0.001
BC044266_1(BC044266|pid:none) Xenopus laevis similar to steroid ... 47 0.001
BX465868_7(BX465868|pid:none) Zebrafish DNA sequence from clone ... 47 0.001
BC150168_1(BC150168|pid:none) Danio rerio si:ch211-278b8.3, mRNA... 47 0.001
CP000584_211(CP000584|pid:none) Ostreococcus lucimarinus CCE9901... 47 0.001
AC137701_10(AC137701|pid:none) Medicago truncatula clone mth2-35... 46 0.002
CP000581_576(CP000581|pid:none) Ostreococcus lucimarinus CCE9901... 46 0.002
CU633900_303(CU633900|pid:none) Podospora anserina genomic DNA c... 46 0.002
BX897677_2(BX897677|pid:none) Neurospora crassa DNA linkage grou... 46 0.002
BC091795_1(BC091795|pid:none) Danio rerio hypothetical protein L... 46 0.002
CR761668_1(CR761668|pid:none) Xenopus tropicalis finished cDNA, ... 45 0.003
AP007164_169(AP007164|pid:none) Aspergillus oryzae RIB40 genomic... 45 0.003
(A4IHD2) RecName: Full=Helicase ARIP4; EC=3.6.1.-; AltN... 45 0.003
FN357292_144(FN357292|pid:none) Schistosoma mansoni genome seque... 45 0.004
AM494961_106(AM494961|pid:none) Leishmania braziliensis chromoso... 45 0.005
(Q9NZC9) RecName: Full=SWI/SNF-related matrix-associated actin-d... 45 0.005
CR954201_555(CR954201|pid:none) Ostreococcus tauri strain OTTH05... 45 0.005
(Q8BHK9) RecName: Full=DNA excision repair protein ERCC-6-like; ... 45 0.005
AK000117_1(AK000117|pid:none) Homo sapiens cDNA FLJ20110 fis, cl... 45 0.005
AK045113_1(AK045113|pid:none) Mus musculus 9.5 days embryo parth... 45 0.005
CP001326_123(CP001326|pid:none) Micromonas sp. RCC299 chromosome... 45 0.005
CR954204_225(CR954204|pid:none) Ostreococcus tauri strain OTTH05... 44 0.009
CT005263_102(CT005263|pid:none) Leishmania major strain Friedlin... 44 0.009
CP001013_2905(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 44 0.009
(Q2NKX8) RecName: Full=DNA excision repair protein ERCC-6-like; ... 44 0.009
CP001032_2531(CP001032|pid:none) Opitutus terrae PB90-1, complet... 44 0.012
CP000450_2110(CP000450|pid:none) Nitrosomonas eutropha C91, comp... 44 0.012
AB210316_1(AB210316|pid:none) Ciona intestinalis mRNA for ATRX p... 43 0.016
CP001407_5159(CP001407|pid:none) Bacillus cereus 03BB102, comple... 43 0.016
CP000352_494(CP000352|pid:none) Ralstonia metallidurans CH34, co... 43 0.016
FP236842_591(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/96... 43 0.016
CP000227_4946(CP000227|pid:none) Bacillus cereus Q1, complete ge... 43 0.016
AE001274_24(AE001274|pid:none) Leishmania major strain Friedlin ... 43 0.016
CP000485_4506(CP000485|pid:none) Bacillus thuringiensis str. Al ... 43 0.016
AM494938_28(AM494938|pid:none) Leishmania braziliensis chromosom... 43 0.020
CP001325_539(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 43 0.020
BC078216_1(BC078216|pid:none) Danio rerio zinc finger, RAN-bindi... 43 0.020
CR382139_799(CR382139|pid:none) Debaryomyces hansenii strain CBS... 43 0.020
AC005936_13(AC005936|pid:none) Arabidopsis thaliana chromosome 2... 43 0.020
FN357451_6(FN357451|pid:none) Schistosoma mansoni genome sequenc... 43 0.020
FN357317_37(FN357317|pid:none) Schistosoma mansoni genome sequen... 43 0.020
AM920427_796(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 43 0.020
AE016879_5077(AE016879|pid:none) Bacillus anthracis str. Ames, c... 42 0.027
AP009153_188(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DNA... 42 0.027
T33152(T33152)hypothetical protein T04D1.4 - Caenorhabditis eleg... 42 0.027
AB037837_1(AB037837|pid:none) Homo sapiens mRNA for KIAA1416 pro... 42 0.035
(A2AJK6) RecName: Full=Chromodomain-helicase-DNA-binding protein... 42 0.035
AK000368_1(AK000368|pid:none) Homo sapiens cDNA FLJ20361 fis, cl... 42 0.035
Z92970_2(Z92970|pid:none) Caenorhabditis elegans Fosmid H06O01, ... 42 0.035
AL807369_10(AL807369|pid:none) Neurospora crassa DNA linkage gro... 42 0.035
CP001071_906(CP001071|pid:none) Akkermansia muciniphila ATCC BAA... 42 0.035
T23056(T23056)chromodomain helicase H06O01.2 - Caenorhabditis el... 42 0.035
AC152349_14(AC152349|pid:none) Medicago truncatula clone mth2-52... 42 0.045
AK048742_1(AK048742|pid:none) Mus musculus 0 day neonate cerebel... 42 0.045
(Q6BKC2) RecName: Full=Helicase SWR1; EC=3.6.1.-; &CR3... 42 0.045
CP000685_1754(CP000685|pid:none) Flavobacterium johnsoniae UW101... 42 0.045
(B4F769) RecName: Full=SWI/SNF-related matrix-associated actin-d... 42 0.045
AE015928_3352(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 42 0.045
CP000312_958(CP000312|pid:none) Clostridium perfringens SM101, c... 42 0.045
BC057567_1(BC057567|pid:none) Mus musculus chromodomain helicase... 42 0.045
AE016877_4999(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 42 0.045
AF088884_1(AF088884|pid:none) Mus musculus HepA-related protein ... 41 0.059
AF209773_1(AF209773|pid:none) Mus musculus HepA-related protein ... 41 0.059
AM156932_18(AM156932|pid:none) Streptomyces steffisburgensis clu... 41 0.059
AK042332_1(AK042332|pid:none) Mus musculus 3 days neonate thymus... 41 0.059
CU640366_1340(CU640366|pid:none) Podospora anserina genomic DNA ... 41 0.077
AF308445_1(AF308445|pid:none) Caenorhabditis elegans LET-418 (le... 41 0.077
AF181828_1(AF181828|pid:none) Nymphicus hollandicus chromosome Z... 41 0.077
(A6QQR4) RecName: Full=DNA excision repair protein ERCC-6-like; ... 41 0.077
CP000454_3772(CP000454|pid:none) Arthrobacter sp. FB24, complete... 41 0.077
CP000246_1119(CP000246|pid:none) Clostridium perfringens ATCC 13... 41 0.077
AF181824_1(AF181824|pid:none) Aegolius funereus chromosome W chr... 41 0.077
(Q7ZU90) RecName: Full=Chromodomain-helicase-DNA-binding protein... 41 0.077
AM910993_249(AM910993|pid:none) Plasmodium knowlesi strain H chr... 41 0.077
AF004397_1(AF004397|pid:none) Gallus gallus chromo-helicase-DNA-... 41 0.077
(Q3B7N1) RecName: Full=Chromodomain-helicase-DNA-binding protein... 41 0.077
CP000139_3630(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 40 0.10
AM502242_26(AM502242|pid:none) Leishmania infantum chromosome 24. 40 0.10
AM746676_4562(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 40 0.10
CP000529_1086(CP000529|pid:none) Polaromonas naphthalenivorans C... 40 0.10
CP001334_203(CP001334|pid:none) Micromonas sp. RCC299 chromosome... 40 0.10
AB185399_1(AB185399|pid:none) Elaphe quadrivirgata CHD1 mRNA for... 40 0.13
(O14646) RecName: Full=Chromodomain-helicase-DNA-binding protein... 40 0.13
BC115822_1(BC115822|pid:none) Mus musculus chromodomain helicase... 40 0.13
BX842650_183(BX842650|pid:none) Bdellovibrio bacteriovorus compl... 40 0.13
CP000750_1009(CP000750|pid:none) Kineococcus radiotolerans SRS30... 40 0.13
AK140386_1(AK140386|pid:none) Mus musculus 4 days neonate thymus... 40 0.13
(P40201) RecName: Full=Chromodomain-helicase-DNA-binding protein... 40 0.13
DQ987497_1(DQ987497|pid:none) Gibberella zeae RING-11 protein mR... 40 0.13
AB326217_1(AB326217|pid:none) Gekko hokouensis CHD1 mRNA for chr... 40 0.13
AC152349_12(AC152349|pid:none) Medicago truncatula clone mth2-52... 40 0.13
BC117134_1(BC117134|pid:none) Homo sapiens chromodomain helicase... 40 0.13
CP001095_571(CP001095|pid:none) Bifidobacterium longum subsp. in... 40 0.17
AY548901_1(AY548901|pid:none) Antonospora locustae helicase MOT1... 40 0.17
AL590451_42(AL590451|pid:none) chromosome IX of strain GB-M1 of ... 40 0.17
AF462829_1(AF462829|pid:none) Arabidopsis thaliana AT5g63950/MBM... 40 0.17
(Q9H6D4) RecName: Full=Chromodomain-helicase-DNA-binding protein... 40 0.17
(Q0P4U8) RecName: Full=SWI/SNF-related matrix-associated actin-d... 40 0.17
AB019227_4(AB019227|pid:none) Arabidopsis thaliana genomic DNA, ... 40 0.17
AK296955_1(AK296955|pid:none) Homo sapiens cDNA FLJ59295 partial... 40 0.17
AY217131_1(AY217131|pid:none) Taeniopygia guttata chromo-helicas... 40 0.17
(Q22516) RecName: Full=Chromodomain-helicase-DNA-binding protein... 40 0.17
AE014295_1651(AE014295|pid:none) Bifidobacterium longum NCC2705,... 40 0.17
AL031667_6(AL031667|pid:none) Human DNA sequence from clone RP4-... 40 0.17
CU928180_295(CU928180|pid:none) Kluyveromyces thermotolerans str... 40 0.17
CP000090_547(CP000090|pid:none) Ralstonia eutropha JMP134 chromo... 40 0.17
CP001620_1251(CP001620|pid:none) Corynebacterium kroppenstedtii ... 40 0.17
AL132957_24(AL132957|pid:none) Arabidopsis thaliana DNA chromoso... 39 0.23
AM494961_63(AM494961|pid:none) Leishmania braziliensis chromosom... 39 0.23
BC168549_1(BC168549|pid:none) Xenopus tropicalis cDNA clone MGC:... 39 0.23
CP000112_1744(CP000112|pid:none) Desulfovibrio desulfuricans G20... 39 0.23
AY305378_172(AY305378|pid:none) Ralstonia eutropha H16 megaplasm... 39 0.23
CR382125_177(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 39 0.23
AP009389_410(AP009389|pid:none) Pelotomaculum thermopropionicum ... 39 0.23
AE008922_1431(AE008922|pid:none) Xanthomonas campestris pv. camp... 39 0.23
CT005263_58(CT005263|pid:none) Leishmania major strain Friedlin,... 39 0.23
(B5DE69) RecName: Full=Chromodomain-helicase-DNA-binding protein... 39 0.23
CP000254_1803(CP000254|pid:none) Methanospirillum hungatei JF-1,... 39 0.23
CR382132_1235(CR382132|pid:none) Yarrowia lipolytica strain CLIB... 39 0.23
CP000820_497(CP000820|pid:none) Frankia sp. EAN1pec, complete ge... 39 0.23
BX538352_70(BX538352|pid:none) Cryptosporidium parvum chromosome... 39 0.23
AK086118_1(AK086118|pid:none) Mus musculus 15 days embryo head c... 39 0.29
AY647157_1(AY647157|pid:none) Homo sapiens KISH2 (KISH2) mRNA, c... 39 0.29
DQ333316_1(DQ333316|pid:none) Homo sapiens PRIC320 isoform 1 mRN... 39 0.29
BC168553_1(BC168553|pid:none) Xenopus tropicalis chromodomain he... 39 0.29
(Q3L8U1) RecName: Full=Chromodomain-helicase-DNA-binding protein... 39 0.29
AK040994_1(AK040994|pid:none) Mus musculus adult male aorta and ... 39 0.29
CP001219_1291(CP001219|pid:none) Acidithiobacillus ferrooxidans ... 39 0.29
AE009951_997(AE009951|pid:none) Fusobacterium nucleatum subsp. n... 39 0.29
AL606628_18(AL606628|pid:none) Oryza sativa genomic DNA, chromos... 39 0.29
AM270143_13(AM270143|pid:none) Aspergillus niger contig An07c026... 39 0.29
(Q8BYH8) RecName: Full=Chromodomain-helicase-DNA-binding protein... 39 0.29
CP000591_41(CP000591|pid:none) Ostreococcus lucimarinus CCE9901 ... 39 0.29
CP001033_1597(CP001033|pid:none) Streptococcus pneumoniae CGSP14... 39 0.29
CU633872_184(CU633872|pid:none) Podospora anserina genomic DNA c... 39 0.29
CP000582_272(CP000582|pid:none) Ostreococcus lucimarinus CCE9901... 39 0.29
AP007166_181(AP007166|pid:none) Aspergillus oryzae RIB40 genomic... 39 0.29
CP000712_4558(CP000712|pid:none) Pseudomonas putida F1, complete... 39 0.29
AM746676_2506(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 39 0.29
AP008231_666(AP008231|pid:none) Synechococcus elongatus PCC 6301... 39 0.38
CP001638_1233(CP001638|pid:none) Geobacillus sp. WCH70, complete... 39 0.38
AP008957_3966(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 39 0.38
AM459930_9(AM459930|pid:none) Vitis vinifera contig VV78X090328.... 39 0.38
FM992689_685(FM992689|pid:none) Candida dubliniensis CD36 chromo... 39 0.38
(Q5FWF4) RecName: Full=Zinc finger Ran-binding domain-containing... 39 0.38
CP001032_3491(CP001032|pid:none) Opitutus terrae PB90-1, complet... 39 0.38
AE014134_63(AE014134|pid:none) Drosophila melanogaster chromosom... 39 0.38
AP009256_963(AP009256|pid:none) Bifidobacterium adolescentis ATC... 39 0.38
AM392702_1(AM392702|pid:none) Synthetic construct Homo sapiens c... 39 0.38
(Q59U81) RecName: Full=Helicase SWR1; EC=3.6.1.-; 39 0.38
AE017351_304(AE017351|pid:none) Cryptococcus neoformans var. neo... 39 0.38
AP004126_9(AP004126|pid:none) Oryza sativa Japonica Group genomi... 39 0.38
AM392694_1(AM392694|pid:none) Synthetic construct Homo sapiens c... 39 0.38
AC002294_13(AC002294|pid:none) Arabidopsis thaliana chromosome I... 39 0.38
AE014134_62(AE014134|pid:none) Drosophila melanogaster chromosom... 39 0.38
AP007159_634(AP007159|pid:none) Aspergillus oryzae RIB40 genomic... 39 0.38
AP007150_297(AP007150|pid:none) Aspergillus oryzae RIB40 genomic... 39 0.38
CU928165_133(CU928165|pid:none) Kluyveromyces thermotolerans str... 39 0.38
AM910993_135(AM910993|pid:none) Plasmodium knowlesi strain H chr... 39 0.38
(Q498E7) RecName: Full=SWI/SNF-related matrix-associated actin-d... 39 0.38
AL590430_1(AL590430|pid:none) Mouse DNA sequence from clone RP23... 38 0.50
CR382131_173(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 38 0.50
(B0R0I6) RecName: Full=Chromodomain-helicase-DNA-binding protein... 38 0.50
AL590430_2(AL590430|pid:none) Mouse DNA sequence from clone RP23... 38 0.50
AK080927_1(AK080927|pid:none) Mus musculus 4 days neonate male a... 38 0.50
AP003490_21(AP003490|pid:none) Oryza sativa Japonica Group genom... 38 0.50
AP007175_224(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 38 0.50
CP001341_3469(CP001341|pid:none) Arthrobacter chlorophenolicus A... 38 0.50
AB287295_1(AB287295|pid:none) Mus musculus TAF170 mRNA for TBP-a... 38 0.50
CT005264_76(CT005264|pid:none) Leishmania major strain Friedlin,... 38 0.50
AK088840_1(AK088840|pid:none) Mus musculus 2 days neonate thymus... 38 0.50
CP001577_493(CP001577|pid:none) Micromonas sp. RCC299 chromosome... 38 0.50
AL928674_21(AL928674|pid:none) Zebrafish DNA sequence from clone... 38 0.50
AM260479_559(AM260479|pid:none) Ralstonia eutropha H16 chromosom... 38 0.50
CP000721_2607(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 38 0.50
CP000462_2793(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 38 0.50
AP008213_829(AP008213|pid:none) Oryza sativa (japonica cultivar-... 38 0.50
BC150806_1(BC150806|pid:none) Mus musculus chromodomain helicase... 38 0.50
AE016817_302(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 38 0.50
AM942444_688(AM942444|pid:none) Corynebacterium urealyticum DSM ... 38 0.50
CR380953_402(CR380953|pid:none) Candida glabrata strain CBS138 c... 38 0.50
AP003915_14(AP003915|pid:none) Oryza sativa Japonica Group genom... 38 0.66
BX530089_4(BX530089|pid:none) Zebrafish DNA sequence from clone ... 38 0.66
CR382121_129(CR382121|pid:none) Kluyveromyces lactis strain NRRL... 38 0.66
AE016818_49(AE016818|pid:none) Ashbya gossypii (= Eremothecium g... 38 0.66
(Q9TTA5) RecName: Full=SWI/SNF-related matrix-associated actin-d... 38 0.66
U80033_2(U80033|pid:none) Caenorhabditis elegans cosmid T23H2, c... 38 0.66
BX908798_375(BX908798|pid:none) Parachlamydia-related symbiont U... 38 0.66
CP000644_1340(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 38 0.66
AL137080_15(AL137080|pid:none) Arabidopsis thaliana DNA chromoso... 38 0.66
CP000023_231(CP000023|pid:none) Streptococcus thermophilus LMG 1... 38 0.66
CU928176_687(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 38 0.66
(Q8RXS6) RecName: Full=DNA helicase INO80 complex homolog 1; ... 38 0.66
AM181176_1524(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 38 0.66
AL391737_32(AL391737|pid:none) chromosome I of strain GB-M1 of E... 38 0.66
CR954202_161(CR954202|pid:none) Ostreococcus tauri strain OTTH05... 38 0.66
CP000961_2196(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 38 0.66
AM999887_318(AM999887|pid:none) Wolbachia endosymbiont of Culex ... 38 0.66
(Q5KHM0) RecName: Full=Putative DNA helicase INO80; EC=... 38 0.66
AE014188_483(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 37 0.86
(Q8TBR9) RecName: Full=Chromodomain-helicase-DNA-binding protein... 37 0.86
AK042139_1(AK042139|pid:none) Mus musculus 3 days neonate thymus... 37 0.86
BC156439_1(BC156439|pid:none) Synthetic construct Homo sapiens c... 37 0.86
AM746676_2993(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 37 0.86
AP008955_3688(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 37 0.86
DQ915964_17(DQ915964|pid:none) Streptomyces echinatus aranciamyc... 37 0.86
CP001330_7(CP001330|pid:none) Micromonas sp. RCC299 chromosome 1... 37 0.86
CP000679_2492(CP000679|pid:none) Caldicellulosiruptor saccharoly... 37 0.86
(Q6NZP1) RecName: Full=Zinc finger Ran-binding domain-containing... 37 0.86
AK083641_1(AK083641|pid:none) Mus musculus 9 days embryo whole b... 37 0.86
EU730901_22(EU730901|pid:none) Brachypodium distachyon clone BAC... 37 0.86
(Q9JIX5) RecName: Full=Chromodomain-helicase-DNA-binding protein... 37 0.86
T09676(T09676;I64201)probable ATP-dependent RNA helicase (EC 3.6... 37 0.86
CP000512_2783(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 37 0.86
(P47264) RecName: Full=Uncharacterized ATP-dependent helicase MG... 37 0.86
(Q09XV5) RecName: Full=Chromodomain-helicase-DNA-binding protein... 37 0.86
AM920428_231(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 37 0.86
AB046784_1(AB046784|pid:none) Homo sapiens mRNA for KIAA1564 pro... 37 0.86
BC117921_1(BC117921|pid:none) Mus musculus zinc finger, RAN-bind... 37 0.86
(Q759G7) RecName: Full=Helicase SWR1; EC=3.6.1.-; &AE0... 37 0.86
AL009126_3749(AL009126|pid:none) Bacillus subtilis subsp. subtil... 37 0.86
CP000471_775(CP000471|pid:none) Magnetococcus sp. MC-1, complete... 37 0.86
AK084943_1(AK084943|pid:none) Mus musculus 13 days embryo lung c... 37 0.86
AL844509_559(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 37 0.86
CP000512_151(CP000512|pid:none) Acidovorax citrulli AAC00-1, com... 37 1.1
CP001601_1029(CP001601|pid:none) Corynebacterium aurimucosum ATC... 37 1.1
EF540321_7(EF540321|pid:none) Triticum turgidum overlapping clon... 37 1.1
FJ427399_1(FJ427399|pid:none) Triticum turgidum clone BAC 738D05... 37 1.1
CP000500_641(CP000500|pid:none) Pichia stipitis CBS 6054 chromos... 37 1.1
AP008957_2001(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 37 1.1
CR954212_281(CR954212|pid:none) Ostreococcus tauri strain OTTH05... 37 1.1
AM902716_4252(AM902716|pid:none) Bordetella petrii strain DSM 12... 37 1.1
CP000698_592(CP000698|pid:none) Geobacter uraniireducens Rf4, co... 37 1.1
FM178379_3046(FM178379|pid:none) Aliivibrio salmonicida LFI1238 ... 37 1.1
(P43610) RecName: Full=Uncharacterized ATP-dependent helicase YF... 37 1.1
CP000592_288(CP000592|pid:none) Ostreococcus lucimarinus CCE9901... 37 1.1
AY485644_6(AY485644|pid:none) Triticum monococcum phosphatidylse... 37 1.1
CP000542_798(CP000542|pid:none) Verminephrobacter eiseniae EF01-... 37 1.1
(A1CZE5) RecName: Full=Putative DNA helicase ino80; EC=... 37 1.1
CP001157_1745(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 37 1.1
FN357616_3(FN357616|pid:none) Schistosoma mansoni genome sequenc... 37 1.1
AE017345_475(AE017345|pid:none) Cryptococcus neoformans var. neo... 37 1.1
BX294149_120(BX294149|pid:none) Rhodopirellula baltica SH 1 comp... 37 1.1
AE017353_120(AE017353|pid:none) Cryptococcus neoformans var. neo... 37 1.1
AF459085_1(AF459085|pid:none) Hordeum vulgare SNF2P (Snf2P) gene... 37 1.1
CT573073_87(CT573073|pid:none) Kuenenia stuttgartiensis genome f... 37 1.1
U64598_15(U64598|pid:none) Caenorhabditis elegans cosmid C52B9, ... 37 1.1
AY485643_5(AY485643|pid:none) Hordeum vulgare subsp. vulgare BAC... 37 1.1
CP000943_867(CP000943|pid:none) Methylobacterium sp. 4-46, compl... 37 1.1
(Q9H4L7) RecName: Full=SWI/SNF-related matrix-associated actin-d... 37 1.5
AM420293_1574(AM420293|pid:none) Saccharopolyspora erythraea NRR... 37 1.5
CP000712_3543(CP000712|pid:none) Pseudomonas putida F1, complete... 37 1.5
CP001635_4528(CP001635|pid:none) Variovorax paradoxus S110 chrom... 37 1.5
CP001331_339(CP001331|pid:none) Micromonas sp. RCC299 chromosome... 37 1.5
AK301668_1(AK301668|pid:none) Homo sapiens cDNA FLJ58701 complet... 37 1.5
CP000949_1662(CP000949|pid:none) Pseudomonas putida W619, comple... 37 1.5
AE014296_3433(AE014296|pid:none) Drosophila melanogaster chromos... 37 1.5
AX876540_1(AX876540|pid:none) Sequence 11445 from Patent EP10746... 37 1.5
AB032948_1(AB032948|pid:none) Homo sapiens mRNA for KIAA1122 pro... 37 1.5
FN357508_4(FN357508|pid:none) Schistosoma mansoni genome sequenc... 37 1.5
AK001342_1(AK001342|pid:none) Homo sapiens cDNA FLJ10480 fis, cl... 37 1.5
BC042442_1(BC042442|pid:none) Mus musculus SWI/SNF-related, matr... 37 1.5
BC005038_1(BC005038|pid:none) Homo sapiens chromodomain helicase... 37 1.5
CP001618_1458(CP001618|pid:none) Beutenbergia cavernae DSM 12333... 37 1.5
AE014299_1619(AE014299|pid:none) Shewanella oneidensis MR-1, com... 37 1.5
AL359929_1(AL359929|pid:none) Homo sapiens mRNA; cDNA DKFZp762K2... 37 1.5
FM180568_2622(FM180568|pid:none) Escherichia coli 0127:H6 E2348/... 37 1.5
EF560738_1(EF560738|pid:none) Homo sapiens clone DKFZp686J1099 C... 37 1.5
AP006618_1038(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 37 1.5
BX294153_294(BX294153|pid:none) Rhodopirellula baltica SH 1 comp... 37 1.5
AC006841_21(AC006841|pid:none) Arabidopsis thaliana chromosome 2... 37 1.5
AF119716_1(AF119716|pid:none) Drosophila melanogaster dMi-2 prot... 37 1.5
(Q04692) RecName: Full=SWI/SNF-related matrix-associated actin-d... 37 1.5
CR940347_91(CR940347|pid:none) Theileria annulata strain Ankara ... 37 1.5
AL356378_7(AL356378|pid:none) Human DNA sequence from clone RP11... 37 1.5
AE006641_1514(AE006641|pid:none) Sulfolobus solfataricus P2, com... 37 1.5
AB385429_1(AB385429|pid:none) Synthetic construct DNA, clone: pF... 37 1.5
AE004092_249(AE004092|pid:none) Streptococcus pyogenes M1 GAS, c... 36 1.9
CP001635_4539(CP001635|pid:none) Variovorax paradoxus S110 chrom... 36 1.9
AM270180_11(AM270180|pid:none) Aspergillus niger contig An08c025... 36 1.9
AC012647_4(AC012647|pid:none) Trypanosoma brucei chromosome 2 cl... 36 1.9
AM238663_1158(AM238663|pid:none) Streptomyces ambofaciens ATCC 2... 36 1.9
CP000259_288(CP000259|pid:none) Streptococcus pyogenes MGAS9429,... 36 1.9
L33180_35(L33180|pid:none) Bombyx mori nuclear polyhedrosis viru... 36 1.9
CP000829_259(CP000829|pid:none) Streptococcus pyogenes NZ131, co... 36 1.9
AE006470_895(AE006470|pid:none) Chlorobium tepidum TLS, complete... 36 1.9
AE017342_103(AE017342|pid:none) Cryptococcus neoformans var. neo... 36 1.9
AM778946_59(AM778946|pid:none) Microcystis aeruginosa PCC 7806 g... 36 1.9
(A1C9W6) RecName: Full=Putative DNA helicase ino80; EC=... 36 1.9
FJ882854_34(FJ882854|pid:none) Bombyx mandarina nucleopolyhedrov... 36 1.9
A84014(A84014) SNF2 helicase BH2913 [imported] - Bacillus halodu... 36 1.9
AM295007_1544(AM295007|pid:none) Streptococcus pyogenes Manfredo... 36 1.9
AE005176_2042(AE005176|pid:none) Lactococcus lactis subsp. lacti... 36 1.9
B84645(B84645)hypothetical protein At2g25170 [imported] - Arabid... 36 1.9
(A2R9H9) RecName: Full=Putative DNA helicase ino80; EC=... 36 1.9
CP000113_7101(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 36 1.9
AM406671_2273(AM406671|pid:none) Lactococcus lactis subsp. cremo... 36 1.9
AE009949_253(AE009949|pid:none) Streptococcus pyogenes MGAS8232,... 36 1.9
CP000003_316(CP000003|pid:none) Streptococcus pyogenes MGAS10394... 36 1.9
CR382123_230(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 36 1.9
(Q5BAZ5) RecName: Full=Putative DNA helicase ino80; EC=... 36 1.9
AP009044_1264(AP009044|pid:none) Corynebacterium glutamicum R DN... 36 1.9
(P41447) RecName: Full=Probable global transactivator; ... 36 1.9
AM502243_77(AM502243|pid:none) Leishmania infantum chromosome 25. 36 1.9
CP000879_287(CP000879|pid:none) Petrotoga mobilis SJ95, complete... 36 1.9
AE017262_1649(AE017262|pid:none) Listeria monocytogenes str. 4b ... 36 1.9
CP000017_288(CP000017|pid:none) Streptococcus pyogenes MGAS5005,... 36 1.9
AE017126_47(AE017126|pid:none) Prochlorococcus marinus subsp. ma... 36 2.5
AM902716_4193(AM902716|pid:none) Bordetella petrii strain DSM 12... 36 2.5
CP000769_3271(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 36 2.5
DQ402511_1(DQ402511|pid:none) Bombyx mori CHD1 (CHD1) mRNA, comp... 36 2.5
CP001110_1046(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 36 2.5
FJ515838_1(FJ515838|pid:none) Homo sapiens isolate CHD2-VI-T chr... 36 2.5
AF292095_1(AF292095|pid:none) Xenopus laevis imitation switch IS... 36 2.5
AK292850_1(AK292850|pid:none) Homo sapiens cDNA FLJ76689 partial... 36 2.5
AE016819_194(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 36 2.5
BX569695_171(BX569695|pid:none) Synechococcus sp. WH8102 complet... 36 2.5
CP001344_1385(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 36 2.5
CR940347_357(CR940347|pid:none) Theileria annulata strain Ankara... 36 2.5
AF006514_1(AF006514|pid:none) Homo sapiens CHD2 mRNA, complete c... 36 2.5
CP000612_3196(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 36 2.5
CP000117_3259(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 36 2.5
AP008955_2641(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 36 2.5
CP000878_51(CP000878|pid:none) Prochlorococcus marinus str. MIT ... 36 2.5
(Q8RWY3) RecName: Full=Putative chromatin-remodeling complex ATP... 36 2.5
(Q5K8T2) RecName: Full=Helicase SWR1; EC=3.6.1.-; &AE0... 36 2.5
AK221299_1(AK221299|pid:none) Arabidopsis thaliana mRNA for pseu... 36 2.5
AL939108_24(AL939108|pid:none) Streptomyces coelicolor A3(2) com... 36 2.5
CP000435_2719(CP000435|pid:none) Synechococcus sp. CC9311, compl... 36 2.5
(Q05471) RecName: Full=Helicase SWR1; EC=3.6.1.-; AltNa... 36 2.5
CT005264_212(CT005264|pid:none) Leishmania major strain Friedlin... 36 2.5
AY091030_1(AY091030|pid:none) Arabidopsis thaliana putative ATPa... 36 2.5
CP000926_1674(CP000926|pid:none) Pseudomonas putida GB-1, comple... 36 2.5
CU633901_345(CU633901|pid:none) Podospora anserina genomic DNA c... 36 2.5
CP001348_3358(CP001348|pid:none) Clostridium cellulolyticum H10,... 35 3.3
(Q4IAK7) RecName: Full=Helicase SWR1; EC=3.6.1.-; 35 3.3
AM910987_113(AM910987|pid:none) Plasmodium knowlesi strain H chr... 35 3.3
AM494962_161(AM494962|pid:none) Leishmania braziliensis chromoso... 35 3.3
(Q08562) RecName: Full=ATP-dependent helicase ULS1; EC=... 35 3.3
AP004367_8(AP004367|pid:none) Oryza sativa Japonica Group genomi... 35 3.3
FN392322_137(FN392322|pid:none) Pichia pastoris GS115 chromosome... 35 3.3
AE015450_702(AE015450|pid:none) Mycoplasma gallisepticum strain ... 35 3.3
AM446553_5(AM446553|pid:none) Vitis vinifera contig VV78X151904.... 35 3.3
CR380957_330(CR380957|pid:none) Candida glabrata strain CBS138 c... 35 3.3
AP006840_657(AP006840|pid:none) Symbiobacterium thermophilum IAM... 35 3.3
AD1643(AD1643) SNF2-type helicase homolog lin1685 [imported] - L... 35 3.3
CP001287_283(CP001287|pid:none) Cyanothece sp. PCC 8801, complet... 35 3.3
AP006618_3780(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 35 3.3
CR626927_171(CR626927|pid:none) Bacteroides fragilis NCTC 9343, ... 35 3.3
BC122690_1(BC122690|pid:none) Bos taurus transcription terminati... 35 3.3
CR378671_252(CR378671|pid:none) Photobacterium profundum SS9; se... 35 3.3
CR382136_332(CR382136|pid:none) Debaryomyces hansenii strain CBS... 35 3.3
AM920437_355(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 35 3.3
AF007780_1(AF007780|pid:none) Drosophila melanogaster CHD3 mRNA,... 35 3.3
AB331397_1(AB331397|pid:none) Brassica rapa DDM1b gene for decre... 35 3.3
(Q9UTN6) RecName: Full=Chromatin structure-remodeling complex su... 35 3.3
AE009951_1736(AE009951|pid:none) Fusobacterium nucleatum subsp. ... 35 3.3
AK018129_1(AK018129|pid:none) Mus musculus adult male medulla ob... 35 3.3
AP006841_214(AP006841|pid:none) Bacteroides fragilis YCH46 DNA, ... 35 3.3
CP000502_77(CP000502|pid:none) Pichia stipitis CBS 6054 chromoso... 35 3.3
AP009552_236(AP009552|pid:none) Microcystis aeruginosa NIES-843 ... 35 4.2
CR382132_51(CR382132|pid:none) Yarrowia lipolytica strain CLIB12... 35 4.2
AP009152_1813(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, ... 35 4.2
CP000094_3863(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 35 4.2
AE017194_1865(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 35 4.2
(O60177) RecName: Full=Uncharacterized ATP-dependent helicase C2... 35 4.2
AB284258_1(AB284258|pid:none) Brassica rapa DDM1 gene for decrea... 35 4.2
CT573073_975(CT573073|pid:none) Kuenenia stuttgartiensis genome ... 35 4.2
AM180252_168(AM180252|pid:none) Lawsonia intracellularis PHE/MN1... 35 4.2
(Q6FK48) RecName: Full=Helicase SWR1; EC=3.6.1.-; &CR3... 35 4.2
FM992690_120(FM992690|pid:none) Candida dubliniensis CD36 chromo... 35 4.2
CP000438_4328(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 35 4.2
CP001110_2694(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 35 4.2
CP000554_2812(CP000554|pid:none) Prochlorococcus marinus str. MI... 35 4.2
BX548175_2777(BX548175|pid:none) Prochlorococcus marinus MIT9313... 35 4.2
CP001087_4635(CP001087|pid:none) Desulfobacterium autotrophicum ... 35 4.2
FM992688_257(FM992688|pid:none) Candida dubliniensis CD36 chromo... 35 4.2
AP003227_41(AP003227|pid:none) Oryza sativa Japonica Group genom... 35 4.2
(Q6BGY8) RecName: Full=Putative DNA helicase INO80; EC=... 35 4.2
S32349(S32349)probable SNF2-type helicase - Bacillus cereus (fra... 35 4.2
CP000744_4665(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 35 4.2
CP001186_1645(CP001186|pid:none) Bacillus cereus G9842, complete... 35 5.5
BC139113_1(BC139113|pid:none) Mus musculus predicted gene, OTTMU... 35 5.5
AB169326_1(AB169326|pid:none) Macaca fascicularis testis cDNA, c... 35 5.5
AP008957_4070(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 35 5.5
CP001185_7(CP001185|pid:none) Thermosipho africanus TCF52B, comp... 35 5.5
AL451013_12(AL451013|pid:none) Neurospora crassa DNA linkage gro... 35 5.5
AM920427_717(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 35 5.5
(Q6CJ38) RecName: Full=Helicase SWR1; EC=3.6.1.-; &CR3... 35 5.5
AF325921_1(AF325921|pid:none) Mus musculus DNA-dependent ATPase ... 35 5.5
CR940347_289(CR940347|pid:none) Theileria annulata strain Ankara... 35 5.5
AM420293_3013(AM420293|pid:none) Saccharopolyspora erythraea NRR... 35 5.5
AK316444_1(AK316444|pid:none) Homo sapiens cDNA, FLJ79343 comple... 35 5.5
(Q4IL82) RecName: Full=Putative DNA helicase INO80; EC=... 35 5.5
AM902716_222(AM902716|pid:none) Bordetella petrii strain DSM 128... 35 5.5
AE016853_2062(AE016853|pid:none) Pseudomonas syringae pv. tomato... 35 5.5
CP000058_1768(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 35 5.5
AD2499(AD2499) hypothetical protein all7172 [imported] - Nostoc ... 35 5.5
CU928145_3198(CU928145|pid:none) Escherichia coli 55989 chromoso... 35 5.5
BT011071_1(BT011071|pid:none) Drosophila melanogaster SD21488 fu... 35 5.5
AP009380_877(AP009380|pid:none) Porphyromonas gingivalis ATCC 33... 35 5.5
CP000627_1328(CP000627|pid:none) Vibrio cholerae O395 chromosome... 35 5.5
BC153225_1(BC153225|pid:none) Bos taurus SWI/SNF related, matrix... 35 5.5
AE003852_1731(AE003852|pid:none) Vibrio cholerae O1 biovar eltor... 35 5.5
FN392320_922(FN392320|pid:none) Pichia pastoris GS115 chromosome... 35 5.5
BX470255_2(BX470255|pid:none) Zebrafish DNA sequence from clone ... 35 5.5
CU928180_235(CU928180|pid:none) Kluyveromyces thermotolerans str... 35 5.5
AE009951_1962(AE009951|pid:none) Fusobacterium nucleatum subsp. ... 35 5.5
AC141111_16(AC141111|pid:none) Medicago truncatula clone mth2-20... 35 5.5
BA000028_3075(BA000028|pid:none) Oceanobacillus iheyensis HTE831... 35 5.5
AC105379_56(AC105379|pid:none) Trypanosoma brucei chromosome 3 c... 35 5.5
(Q9S775) RecName: Full=CHD3-type chromatin-remodeling factor PIC... 35 5.5
FN392320_1272(FN392320|pid:none) Pichia pastoris GS115 chromosom... 35 5.5
AJ719817_1(AJ719817|pid:none) Gallus gallus mRNA for hypothetica... 35 5.5
(Q91ZW3) RecName: Full=SWI/SNF-related matrix-associated actin-d... 35 5.5
FM992690_238(FM992690|pid:none) Candida dubliniensis CD36 chromo... 35 5.5
BC133097_1(BC133097|pid:none) Danio rerio SWI/SNF related, matri... 35 5.5
AM412317_1579(AM412317|pid:none) Clostridium botulinum A str. AT... 34 7.2
CT005267_137(CT005267|pid:none) Leishmania major strain Friedlin... 34 7.2
BC059235_1(BC059235|pid:none) Mus musculus INO80 complex homolog... 34 7.2
AF474993_1(AF474993|pid:none) Exophiala dermatitidis putative tr... 34 7.2
>AY069599_1(AY069599|pid:none) Drosophila melanogaster LD35220 full
insert cDNA.
Length = 788
Score = 103 bits (258), Expect = 7e-21
Identities = 50/93 (53%), Positives = 67/93 (72%), Gaps = 9/93 (9%)
Frame = +1
Query: 775 KPLHNPLAPNSLVLFTPVDITGENR---------IHCVVDPILSQKLRPHQREGVQFMFD 927
+PLH+P+A N+LVLF P T R +H VVDP+LS LRPHQREGV+FM++
Sbjct: 114 RPLHDPMACNALVLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYE 173
Query: 928 CLLGFRGGFKGNGCILADDMGLGKSIQAITILW 1026
C+ G RG F NGCI+AD+MGLGK++Q +T++W
Sbjct: 174 CVEGKRGNF--NGCIMADEMGLGKTLQCVTLVW 204
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,299,497,501
Number of extensions: 23369040
Number of successful extensions: 62116
Number of sequences better than 10.0: 580
Number of HSP's gapped: 61803
Number of HSP's successfully gapped: 582
Length of query: 342
Length of database: 1,051,180,864
Length adjustment: 129
Effective length of query: 213
Effective length of database: 633,664,753
Effective search space: 134970592389
Effective search space used: 134970592389
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
1 |
| VF (FL, S) |
0 |
| AH (FL, L) |
5 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
3 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
1 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |