| Contig-U12695-1 |
| Contig ID |
Contig-U12695-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
974 |
| Chromosome number (1..6, M) |
6 |
| Chromosome length |
3595308 |
| Start point |
91135 |
| End point |
92111 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
45 |
| Number of EST |
45 |
| Link to clone list |
U12695 |
| List of clone(s) |
est1=VFN167F,1,660
est2=VHI370Z,62,865
est3=VHI805Z,83,828
est4=VHO690Z,84,878
est5=VHK414Z,121,866
est6=VHJ677Z,122,865
est7=VHK746Z,122,865
est8=VHO140Z,133,866
est9=VHD368Z,134,866
est10=VHI452Z,177,864
est11=VHM372Z,227,863
est12=VHF687Z,235,862
est13=VHD542Z,327,821
est14=VHI816Z,333,830
est15=VHF111Z,348,875
est16=VHB165Z,361,830
est17=VHC673Z,362,865
est18=VHD101Z,362,830
est19=VHD682Z,362,863
est20=VHK762Z,371,670
est21=VHP888Z,371,826
est22=VHO852Z,382,759
est23=VHA135Z,384,735
est24=VHA623Z,384,943
est25=VHA439Z,387,974
est26=VHM169Z,442,831
est27=AHQ830Z,466,712
est28=VHQ356Z,467,976
est29=VHF129Z,470,642
est30=VHQ355Z,506,817
est31=VHB454Z,543,768
est32=VHK777Z,545,864
est33=VHO717Z,550,831
est34=VHE245Z,565,819
est35=VSJ810F,599,719
est36=VHO193Z,608,830
est37=VHN454Z,609,760
est38=VHQ415Z,609,830
est39=VHH234Z,682,974
est40=VHN410Z,684,819
est41=VHN758Z,685,972
est42=VHJ524Z,709,974
est43=AHF571Z,834,953
est44=VHI596Z,842,977
est45=VHO576Z,869,972
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.12. 2 |
| Homology vs DNA |
Query= Contig-U12695-1 (Contig-U12695-1Q) /CSM_Contig/Contig-U12695-1Q.Seq.d
(974 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ441729) Dictyostelium discoideum cDNA clone:ddv47l17, 3' ... 1511 0.0 2
(BJ445827) Dictyostelium discoideum cDNA clone:ddv60c24, 3' ... 1475 0.0 2
(BJ441869) Dictyostelium discoideum cDNA clone:ddv48j02, 3' ... 1447 0.0 1
(BJ442851) Dictyostelium discoideum cDNA clone:ddv51l04, 3' ... 1396 0.0 2
(BJ443265) Dictyostelium discoideum cDNA clone:ddv52l11, 3' ... 1390 0.0 2
(BJ442747) Dictyostelium discoideum cDNA clone:ddv50i20, 3' ... 1390 0.0 2
(BJ438328) Dictyostelium discoideum cDNA clone:ddv37h17, 3' ... 1376 0.0 2
(BJ445433) Dictyostelium discoideum cDNA clone:ddv59o09, 3' ... 1372 0.0 2
(BJ416856) Dictyostelium discoideum cDNA clone:ddv27e17, 5' ... 1277 0.0 1
(BJ441711) Dictyostelium discoideum cDNA clone:ddv47h14, 3' ... 1275 0.0 2
(BJ444236) Dictyostelium discoideum cDNA clone:ddv55p17, 3' ... 1185 0.0 2
(BJ440187) Dictyostelium discoideum cDNA clone:ddv42m22, 3' ... 1122 0.0 2
(BJ439620) Dictyostelium discoideum cDNA clone:ddv41e03, 3' ... 866 0.0 3
(BJ438883) Dictyostelium discoideum cDNA clone:ddv38c22, 3' ... 833 0.0 1
(BJ438218) Dictyostelium discoideum cDNA clone:ddv36a20, 3' ... 821 0.0 1
(BJ438720) Dictyostelium discoideum cDNA clone:ddv38c11, 3' ... 805 0.0 1
(BJ441903) Dictyostelium discoideum cDNA clone:ddv48p04, 3' ... 781 0.0 1
(BJ437189) Dictyostelium discoideum cDNA clone:ddv33a17, 3' ... 718 0.0 1
(BJ438449) Dictyostelium discoideum cDNA clone:ddv37a01, 3' ... 688 0.0 1
(BJ436769) Dictyostelium discoideum cDNA clone:ddv32m06, 3' ... 670 0.0 1
(BJ436524) Dictyostelium discoideum cDNA clone:ddv31n10, 3' ... 664 0.0 1
(BJ444207) Dictyostelium discoideum cDNA clone:ddv55i17, 3' ... 591 e-164 1
(BJ446744) Dictyostelium discoideum cDNA clone:ddv63p13, 3' ... 547 e-151 1
(BJ446516) Dictyostelium discoideum cDNA clone:ddv62p22, 3' ... 505 e-139 1
(BJ436476) Dictyostelium discoideum cDNA clone:ddv31e09, 3' ... 418 e-112 1
(BJ445770) Dictyostelium discoideum cDNA clone:ddv60h14, 3' ... 398 e-106 1
(BJ445599) Dictyostelium discoideum cDNA clone:ddv60b05, 3' ... 385 e-102 1
(BJ443420) Dictyostelium discoideum cDNA clone:ddv52j19, 3' ... 357 5e-94 1
(BJ439076) Dictyostelium discoideum cDNA clone:ddv39i12, 3' ... 321 3e-83 1
(BJ446734) Dictyostelium discoideum cDNA clone:ddv63n13, 3' ... 307 4e-79 1
(BJ443349) Dictyostelium discoideum cDNA clone:ddv52l15, 3' ... 305 2e-78 1
(BJ445558) Dictyostelium discoideum cDNA clone:ddv59i23, 3' ... 270 9e-68 1
(BJ357695) Dictyostelium discoideum cDNA clone:dda64l08, 3' ... 262 2e-65 1
(BJ446588) Dictyostelium discoideum cDNA clone:ddv63n04, 3' ... 240 8e-59 1
(BJ440965) Dictyostelium discoideum cDNA clone:ddv45c10, 3' ... 240 8e-59 1
(BJ437246) Dictyostelium discoideum cDNA clone:ddv33l14, 3' ... 176 1e-39 1
(BJ445130) Dictyostelium discoideum cDNA clone:ddv58d15, 3' ... 172 2e-38 1
(BJ444647) Dictyostelium discoideum cDNA clone:ddv57d04, 3' ... 172 2e-38 1
(AU270507) Dictyostelium discoideum vegetative cDNA clone:VS... 168 2e-37 1
(BJ442539) Dictyostelium discoideum cDNA clone:ddv50o05, 3' ... 159 2e-34 1
(BJ439712) Dictyostelium discoideum cDNA clone:ddv41i07, 3' ... 151 6e-32 1
(BJ444856) Dictyostelium discoideum cDNA clone:ddv57l14, 3' ... 139 2e-28 1
(BJ445100) Dictyostelium discoideum cDNA clone:ddv58n12, 3' ... 125 3e-24 1
(BJ351284) Dictyostelium discoideum cDNA clone:dda42m17, 3' ... 56 0.003 1
(DJ131269) Method for identification of useful proteins deri... 44 0.30 2
(BJ409746) Dictyostelium discoideum cDNA clone:dds42i02, 3' ... 48 0.63 1
(AC180826) Strongylocentrotus purpuratus clone R3-3071D03, W... 46 2.5 1
(AC172383) Strongylocentrotus purpuratus clone R3-1004K19, W... 46 2.5 1
(EJ576670) 1092960113074 Global-Ocean-Sampling_GS-29-01-01-1... 46 2.5 1
(CP000504) Pyrobaculum islandicum DSM 4184, complete genome. 46 2.5 1
(ER427374) 1092963759705 Global-Ocean-Sampling_GS-35-01-01-1... 34 3.0 3
(EF059199) Synthetic construct Saccharomyces cerevisiae clon... 36 4.1 2
(DJ207216) Method for identification of useful proteins deri... 36 4.1 2
(AX830330) Sequence 1050 from Patent WO03072602. 36 4.1 2
(AX819300) Sequence 1050 from Patent EP1338608. 36 4.1 2
(AC165636) Bos taurus clone CH240-164B22, WORKING DRAFT SEQU... 32 4.6 2
(AC220507) Bos taurus clone CH240-355O3, WORKING DRAFT SEQUE... 32 4.7 2
(AC171130) Helobdella robusta clone CH306-1A12, complete seq... 34 4.9 2
(AX536910) Sequence 511 from Patent WO02064766. 32 5.9 3
(AR941660) Sequence 511 from patent US 7101990. 32 5.9 3
(AJ821179) Bos sp. EST, clone C0006018m18. 32 6.3 2
(CU915535) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 9.4 4
(BX537303) Zebrafish DNA sequence from clone DKEYP-73E12. 44 9.8 1
(BC093361) Danio rerio zgc:112522, mRNA (cDNA clone MGC:1125... 44 9.8 1
(CT033786) Mouse DNA sequence from clone RP24-298F18 on chro... 44 9.8 1
(AC163295) Mus musculus BAC clone RP23-132K20 from chromosom... 44 9.8 1
(AC162460) Mus musculus chromosome 5, clone RP24-247A21, com... 44 9.8 1
(AC102487) Mus musculus chromosome 5, clone RP24-496C22, com... 44 9.8 1
(AC152772) Bos taurus clone CH240-10M22, WORKING DRAFT SEQUE... 44 9.8 1
(AC111644) Rattus norvegicus clone CH230-102H20, *** SEQUENC... 44 9.8 1
(AC222912) Bos taurus clone CH240-435I4, WORKING DRAFT SEQUE... 44 9.8 1
(AZ001821) RPCI-23-371P13.TV RPCI-23 Mus musculus genomic cl... 44 9.8 1
(ED009397) MUGQ_CH252P094C06T7_CP161_077 CHORI-252 Vervet Mo... 44 9.8 1
(BZ305127) KD3340.p1 Kluyveromyces delphensis Random Genomic... 44 9.8 1
(BZ305090) KD3321.p1 Kluyveromyces delphensis Random Genomic... 44 9.8 1
(BZ301246) KD1162.p1 Kluyveromyces delphensis Random Genomic... 44 9.8 1
(DT749388) EST1183237 Aquilegia cDNA library Aquilegia formo... 44 9.8 1
(DT236983) JGI_CAAT9548.fwd CAAT Pimephales promelas brain 7... 44 9.8 1
(AM580477) Paracentrotus lividus EST, clone MPMGp1173F1229Q,... 44 9.8 1
(AM526703) Paracentrotus lividus EST, clone MPMGp1171B22119Q... 44 9.8 1
(AM507473) Paracentrotus lividus EST, clone MPMGp1171N0415Q,... 44 9.8 1
(CO916109) AGENCOURT_30430657 NIH_ZGC_17 Danio rerio cDNA cl... 44 9.8 1
(AM222644) Paracentrotus lividus EST, clone MPMGp1174I114Q, ... 44 9.8 1
(AM222556) Paracentrotus lividus EST, clone MPMGp1174E064Q, ... 44 9.8 1
(AM215256) Paracentrotus lividus EST, clone MPMGp1174M0531Q,... 44 9.8 1
(AW280890) fj47c02.y1 zebrafish adult brain Danio rerio cDNA... 44 9.8 1
>(BJ441729) Dictyostelium discoideum cDNA clone:ddv47l17, 3' end,
single read.
Length = 804
Score = 1511 bits (762), Expect(2) = 0.0
Identities = 777/782 (99%)
Strand = Plus / Minus
Query: 62 gagaactgcaattcgttctcttcattatgatcactctgtaaagattgccctttctttcaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gagaactgcaattcgttctcttcattatgatcactctgtaaagattgccctttctttcaa 745
Query: 122 atcaagatggtgggaagattccaaattcatgaatggtaaaccaatgctcggtggtaaatc 181
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 744 atcaagatggtgggaagattccaaattcatgaatggtagaccaatgctcggtggtaaatc 685
Query: 182 atcaacagatcttccagttcgtaccatcgtctatccatcctatggtattggtcaaccagg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 atcaacagatcttccagttcgtaccatcgtctatccatcctatggtattggtcaaccagg 625
Query: 242 tgttagtggtgttttaatcgtttcttacacttggagtttagatgcatccagaattggtag 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgttagtggtgttttaatcgtttcttacacttggagtttagatgcatccagaattggtag 565
Query: 302 tttggttggtgatagaccaagtgaagaggtcttaatcaaattatgtatggccaatcttgc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttggttggtgatagaccaagtgaagaggtcttaatcaaattatgtatggccaatcttgc 505
Query: 362 tgaagttcacaatgttccagtcgctaccctccaacaattatttgttgattacaaatgttg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgaagttcacaatgttccagtcgctaccctccaacaattatttgttgattacaaatgttg 445
Query: 422 ggattggtataatgatgattattcatcaggtgcatttgctctctacagtccatcacaatt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggattggtataatgatgattattcatcaggtgcatttgctctctacagtccatcacaatt 385
Query: 482 ttttcaattgttcccatcacttactaaaccatcaccagatggtagattccatttagctgg 541
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctctcaattgttcccatcacttactaaaccatcaccagatggtagattccatttagctgg 325
Query: 542 tgaagcaacatctgttcatcatggttgggtcattggttctcttaactctgcctatcgttc 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgaagcaacatctgttcatcatggttgggtcattggttctcttaactctgcctatcgttc 265
Query: 602 agtcgatcacatttttcaagttgaaggtcttgatgagttacgtgccaaattacgtttcaa 661
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 264 agtcgatcacattcttcaagttgaaggtcttgatgagttacgtgccaaattacgtctcaa 205
Query: 662 ttggggtttcatcgatgaagttgaagatcctcaagatgatcaacaatatgttgacccaca 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ttggggtttcatcgatgaagttgaagatcctcaagatgatcaacaatatgttgacccaca 145
Query: 722 tcacaatttaagtggtccaaatgctaaaaaattcagatcaaatgtatcacaagttgccat 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 tcacaatttaagtggtccaaatgctaaaaaattcagatcaaatgtatcacaagttgccat 85
Query: 782 tcaaccaagattcaaagctccaagaaactttaaaccaagaaatactgctgctagtattgg 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 tcaaccaagattcaaagctccaagaaactttaaaccaagaaatactgctgctagtattgg 25
Query: 842 gg 843
||
Sbjct: 24 gg 23
Score = 44.1 bits (22), Expect(2) = 0.0
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 841 ggggttttaaataaatcaaaaccaat 866
||||| ||||||||||||||||||||
Sbjct: 26 ggggtcttaaataaatcaaaaccaat 1
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 964,466,058
Number of extensions: 54288110
Number of successful extensions: 4001113
Number of sequences better than 10.0: 86
Length of query: 974
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 950
Effective length of database: 97,308,875,965
Effective search space: 92443432166750
Effective search space used: 92443432166750
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7. 4 |
| Homology vs Protein |
Query= Contig-U12695-1 (Contig-U12695-1Q) /CSM_Contig/Contig-U12695-1Q.Seq.d
(974 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CU638744_414(CU638744|pid:none) Podospora anserina genomic DNA c... 175 2e-42
AJ269533_1(AJ269533|pid:none) Trichoderma harzianum mRNA for put... 147 5e-34
AL670008_3(AL670008|pid:none) Neurospora crassa DNA linkage grou... 146 9e-34
AF542515_1(AF542515|pid:none) Hypocrea pseudokoningii L-amino ac... 144 3e-33
CP000903_1763(CP000903|pid:none) Bacillus weihenstephanensis KBA... 132 2e-29
AE016879_1761(AE016879|pid:none) Bacillus anthracis str. Ames, c... 131 4e-29
AE017355_1736(AE017355|pid:none) Bacillus thuringiensis serovar ... 129 2e-28
AE016877_1786(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 127 6e-28
CP001177_1859(CP001177|pid:none) Bacillus cereus AH187, complete... 125 2e-27
CP000001_1806(CP000001|pid:none) Bacillus cereus E33L, complete ... 119 1e-25
CP001215_2479(CP001215|pid:none) Bacillus anthracis str. CDC 684... 119 2e-25
CP000485_1688(CP000485|pid:none) Bacillus thuringiensis str. Al ... 119 2e-25
CP000227_1914(CP000227|pid:none) Bacillus cereus Q1, complete ge... 118 3e-25
AE017355_1818(AE017355|pid:none) Bacillus thuringiensis serovar ... 118 3e-25
CP001176_1882(CP001176|pid:none) Bacillus cereus B4264, complete... 117 8e-25
CP001177_1961(CP001177|pid:none) Bacillus cereus AH187, complete... 117 8e-25
AJ400871_1(AJ400871|pid:none) Scomber japonicus mRNA for endopla... 116 1e-24
Y11171_1(Y11171|pid:none) B.cereus bc542a gene. 116 1e-24
AE017194_2083(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 116 1e-24
CP001186_1880(CP001186|pid:none) Bacillus cereus G9842, complete... 115 2e-24
AF027868_35(AF027868|pid:none) Bacillus subtilis chromosome regi... 115 2e-24
(O34363) RecName: Full=Putative L-amino-acid oxidase yobN; ... 115 2e-24
AE017333_1841(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 114 5e-24
CP000903_1843(CP000903|pid:none) Bacillus weihenstephanensis KBA... 114 7e-24
CP000686_2527(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 112 2e-23
CP000804_1816(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 111 4e-23
AB268588_10(AB268588|pid:none) Gallus gallus genes, MHC region, ... 103 7e-21
CP000724_2828(CP000724|pid:none) Alkaliphilus metalliredigens QY... 100 6e-20
CP000721_4025(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 100 1e-19
AL606922_10(AL606922|pid:none) Mouse DNA sequence from clone RP2... 97 6e-19
AB034801_1(AB034801|pid:none) Mus musculus mLAO mRNA for L-amino... 97 6e-19
CP000685_3808(CP000685|pid:none) Flavobacterium johnsoniae UW101... 97 6e-19
BC017599_1(BC017599|pid:none) Mus musculus L-amino acid oxidase ... 97 6e-19
CU638744_406(CU638744|pid:none) Podospora anserina genomic DNA c... 96 2e-18
AK015331_1(AK015331|pid:none) Mus musculus adult male testis cDN... 94 9e-18
CP000885_2882(CP000885|pid:none) Clostridium phytofermentans ISD... 94 9e-18
AK014297_1(AK014297|pid:none) Mus musculus 14, 17 days embryo he... 90 1e-16
AK172393_1(AK172393|pid:none) Mus musculus activated spleen cDNA... 90 1e-16
AK133082_1(AK133082|pid:none) Mus musculus adult male testis cDN... 90 1e-16
AY178834_1(AY178834|pid:none) Mus musculus strain NZB interleuki... 90 1e-16
(Q9CXK7) RecName: Full=L-amino-acid oxidase; Short=LAAO... 90 1e-16
AY157537_1(AY157537|pid:none) Mus musculus strain NZW interleuki... 88 4e-16
CP000721_2564(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 87 1e-15
CP001348_1741(CP001348|pid:none) Clostridium cellulolyticum H10,... 86 2e-15
(Q4JHE3) RecName: Full=L-amino-acid oxidase; Short=LAAO... 86 3e-15
(A6MFL0) RecName: Full=L-amino-acid oxidase; Short=LAAO... 85 3e-15
EF080833_1(EF080833|pid:none) Bungarus fasciatus L-amino acid ox... 84 1e-14
DQ464267_1(DQ464267|pid:none) Sistrurus catenatus edwardsi L-ami... 84 1e-14
(Q4F867) RecName: Full=L-amino-acid oxidase; Short=LAAO... 84 1e-14
EF080832_1(EF080832|pid:none) Bungarus multicinctus L-amino acid... 84 1e-14
DQ079587_1(DQ079587|pid:none) Homo sapiens interleukin-4 induced... 82 2e-14
AK074097_1(AK074097|pid:none) Homo sapiens mRNA for FLJ00168 pro... 82 2e-14
BC064378_1(BC064378|pid:none) Homo sapiens interleukin 4 induced... 82 2e-14
AJ880387_1(AJ880387|pid:none) Homo sapiens mRNA for interleukin ... 82 2e-14
BC131625_1(BC131625|pid:none) Homo sapiens interleukin 4 induced... 82 2e-14
(Q96RQ9) RecName: Full=L-amino-acid oxidase; Short=LAAO... 82 2e-14
(P56742) RecName: Full=L-amino-acid oxidase; Short=LAAO... 82 3e-14
CP000939_1195(CP000939|pid:none) Clostridium botulinum B1 str. O... 81 6e-14
(Q6STF1) RecName: Full=L-amino-acid oxidase; Short=LAAO... 80 8e-14
CP000728_1177(CP000728|pid:none) Clostridium botulinum F str. La... 80 8e-14
(P81382) RecName: Full=L-amino-acid oxidase; Short=LAAO... 80 1e-13
CP001056_2263(CP001056|pid:none) Clostridium botulinum B str. Ek... 80 1e-13
(O93364) RecName: Full=L-amino-acid oxidase; Short=LAAO... 79 2e-13
EU870608_1(EU870608|pid:none) Bothrops neuwiedi pauloensis L-ami... 79 3e-13
AM412317_1191(AM412317|pid:none) Clostridium botulinum A str. AT... 77 1e-12
CP000304_1587(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 77 1e-12
AM920431_642(AM920431|pid:none) Penicillium chrysogenum Wisconsi... 76 2e-12
AM039952_3541(AM039952|pid:none) Xanthomonas campestris pv. vesi... 75 3e-12
AP008229_1119(AP008229|pid:none) Xanthomonas oryzae pv. oryzae M... 74 6e-12
AE008923_3377(AE008923|pid:none) Xanthomonas axonopodis pv. citr... 74 1e-11
CU633457_43(CU633457|pid:none) Podospora anserina genomic DNA ch... 71 6e-11
AP006618_2656(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 71 6e-11
(P06617) RecName: Full=Tryptophan 2-monooxygenase; EC=1... 70 8e-11
A53376(A53376) tryptophan 2-monooxygenase (EC 1.13.12.3) - Pseud... 70 1e-10
CP000272_1177(CP000272|pid:none) Burkholderia xenovorans LB400 c... 69 2e-10
CP000323_1773(CP000323|pid:none) Psychrobacter cryohalolentis K5... 69 2e-10
CP000075_1535(CP000075|pid:none) Pseudomonas syringae pv. syring... 69 2e-10
CP000613_3837(CP000613|pid:none) Rhodospirillum centenum SW, com... 68 4e-10
AF239797_1(AF239797|pid:none) Streptomyces platensis L-glutamate... 68 5e-10
AY530536_1(AY530536|pid:none) Pseudomonas syringae pv. syringae ... 67 7e-10
AB085623_1(AB085623|pid:none) Streptomyces sp. X-119-6 Lgox gene... 67 9e-10
A75581(A75581) flavin monoamine oxidase-related protein - Deinoc... 66 2e-09
CP000082_1152(CP000082|pid:none) Psychrobacter arcticus 273-4, c... 65 3e-09
CP000359_1813(CP000359|pid:none) Deinococcus geothermalis DSM 11... 63 1e-08
CP000615_1089(CP000615|pid:none) Burkholderia vietnamiensis G4 c... 62 2e-08
CP000542_795(CP000542|pid:none) Verminephrobacter eiseniae EF01-... 62 3e-08
AM238664_1016(AM238664|pid:none) Streptomyces ambofaciens ATCC 2... 62 4e-08
CU633872_42(CU633872|pid:none) Podospora anserina genomic DNA ch... 61 5e-08
CP000832_95(CP000832|pid:none) Dinoroseobacter shibae DFL 12 pla... 59 2e-07
CP000323_1128(CP000323|pid:none) Psychrobacter cryohalolentis K5... 59 3e-07
CP000685_4459(CP000685|pid:none) Flavobacterium johnsoniae UW101... 59 3e-07
(Q04564) RecName: Full=Tryptophan 2-monooxygenase; EC=1... 55 4e-06
AP007175_547(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 52 2e-05
EF080839_1(EF080839|pid:none) Naja atra L-amino acid oxidase mRN... 52 3e-05
EU195114_24(EU195114|pid:none) Streptomyces refuineus subsp. the... 52 4e-05
AM181176_5536(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 51 7e-05
AB078782_1(AB078782|pid:none) Aspergillus oryzae laoA gene for L... 50 1e-04
AY899214_20(AY899214|pid:none) Streptomyces aizunensis strain NR... 50 2e-04
AM889285_2456(AM889285|pid:none) Gluconacetobacter diazotrophicu... 50 2e-04
CP000393_1148(CP000393|pid:none) Trichodesmium erythraeum IMS101... 49 2e-04
CT573326_1948(CT573326|pid:none) Pseudomonas entomophila str. L4... 48 4e-04
CP000850_2251(CP000850|pid:none) Salinispora arenicola CNS-205, ... 48 6e-04
AF126446_4(AF126446|pid:none) Agrobacterium tumefaciens plasmid ... 47 0.001
AE007871_12(AE007871|pid:none) Agrobacterium tumefaciens str. C5... 47 0.001
CT971583_67(CT971583|pid:none) Synechococcus WH7803 complete gen... 47 0.001
DQ058764_7(DQ058764|pid:none) Agrobacterium tumefaciens Ti plasm... 46 0.002
AB164633_1(AB164633|pid:none) Streptomyces griseus AdBS4 gene cl... 45 0.004
AI2498(AI2498) L-amino acid oxidase [imported] - Nostoc sp. (str... 45 0.004
(Q09109) RecName: Full=Tryptophan 2-monooxygenase; EC=1... 45 0.004
(P0A3V2) RecName: Full=Tryptophan 2-monooxygenase; EC=1... 45 0.005
DQ782955_2(DQ782955|pid:none) Agrobacterium rhizogenes strain AT... 45 0.005
DQ399653_10(DQ399653|pid:none) Nonomuraea longicatena K-252a bio... 45 0.005
BA000030_6900(BA000030|pid:none) Streptomyces avermitilis MA-468... 44 0.006
CP000750_84(CP000750|pid:none) Kineococcus radiotolerans SRS3021... 44 0.006
AJ237588_16(AJ237588|pid:none) Agrobacterium tumefaciens Ti plas... 44 0.011
S41891(S41891) tryptophan 2-monooxygenase (EC 1.13.12.3) - Agrob... 44 0.011
CP001157_314(CP001157|pid:none) Azotobacter vinelandii DJ, compl... 44 0.011
CP000454_1103(CP000454|pid:none) Arthrobacter sp. FB24, complete... 44 0.011
AP011115_3325(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 43 0.014
AL939109_10(AL939109|pid:none) Streptomyces coelicolor A3(2) com... 43 0.019
CU640366_902(CU640366|pid:none) Podospora anserina genomic DNA c... 42 0.032
CP000750_1428(CP000750|pid:none) Kineococcus radiotolerans SRS30... 42 0.042
CP000587_3(CP000587|pid:none) Ostreococcus lucimarinus CCE9901 c... 42 0.042
CP000362_1391(CP000362|pid:none) Roseobacter denitrificans OCh 1... 41 0.054
CR936503_586(CR936503|pid:none) Lactobacillus sakei strain 23K c... 41 0.054
BX842653_12(BX842653|pid:none) Bdellovibrio bacteriovorus comple... 40 0.093
CP000474_1173(CP000474|pid:none) Arthrobacter aurescens TC1, com... 40 0.16
AM181176_2124(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 40 0.16
AM260479_851(AM260479|pid:none) Ralstonia eutropha H16 chromosom... 39 0.21
CP000949_481(CP000949|pid:none) Pseudomonas putida W619, complet... 39 0.35
CP000494_2562(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 39 0.35
CR954207_10(CR954207|pid:none) Ostreococcus tauri strain OTTH059... 39 0.35
AE016825_3102(AE016825|pid:none) Chromobacterium violaceum ATCC ... 38 0.46
(Q6PLK3) RecName: Full=Amine oxidase [flavin-containing] B; ... 38 0.46
BC084428_1(BC084428|pid:none) Xenopus laevis hypothetical LOC495... 38 0.60
AP008957_1260(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 38 0.60
AC007190_18(AC007190|pid:none) Genomic sequence for Arabidopsis ... 37 0.78
(Q8VXV7) RecName: Full=Lysine-specific histone demethylase 1 hom... 37 0.78
CP000075_455(CP000075|pid:none) Pseudomonas syringae pv. syringa... 37 1.0
FJ499321_1(FJ499321|pid:none) Gallus gallus breed Wenchang folli... 37 1.0
AP011115_1691(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 37 1.0
CP000926_5000(CP000926|pid:none) Pseudomonas putida GB-1, comple... 37 1.0
(P79763) RecName: Full=Follicle-stimulating hormone receptor; ... 37 1.0
AP007157_658(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 37 1.3
CR954203_358(CR954203|pid:none) Ostreococcus tauri strain OTTH05... 36 1.7
U41406_1(U41406|pid:none) Coturnix coturnix ovarian follitropin ... 36 1.7
CP000058_4491(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 36 1.7
CP000431_1988(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 36 1.7
CP000388_2689(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 36 2.3
CP000712_4799(CP000712|pid:none) Pseudomonas putida F1, complete... 35 3.0
AE015451_380(AE015451|pid:none) Pseudomonas putida KT2440 comple... 35 3.9
AP006618_3091(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 35 3.9
AB353854_1(AB353854|pid:none) Pseudomonas putida davB gene for l... 35 3.9
CU234118_2229(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 35 5.1
CP000599_67(CP000599|pid:none) Ostreococcus lucimarinus CCE9901 ... 35 5.1
CP000076_5577(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 35 5.1
M65085_1(M65085|pid:none) Human follicle stimulating hormone rec... 34 6.6
X68044_1(X68044|pid:none) H.sapiens mRNA for follicle-stimulatin... 34 6.6
DQ845245_1(DQ845245|pid:none) Bubalus bubalis FSH receptor mRNA,... 34 6.6
AE003849_505(AE003849|pid:none) Xylella fastidiosa 9a5c, complet... 34 6.6
(P23945) RecName: Full=Follicle-stimulating hormone receptor; ... 34 6.6
AM420293_4765(AM420293|pid:none) Saccharopolyspora erythraea NRR... 34 6.6
T43046(T43046) retrovirus-related pol polyprotein homolog - Medi... 34 6.6
AL844507_240(AL844507|pid:none) Plasmodium falciparum 3D7 chromo... 34 8.7
>CU638744_414(CU638744|pid:none) Podospora anserina genomic DNA
chromosome 6, supercontig 2.
Length = 624
Score = 175 bits (443), Expect = 2e-42
Identities = 97/235 (41%), Positives = 146/235 (62%), Gaps = 8/235 (3%)
Frame = +3
Query: 6 TLASLRRVDLSDLKLSHNKRTAIRSLHYDHSVKIALSFKSRWWEDSKFMNGKPMLGGKSS 185
TL L R+DL L+L +++ AIR+LHYD SVK+AL F WW ++ GG +S
Sbjct: 371 TLGCLGRMDLRSLELHPSQKDAIRALHYDESVKVALKFSYPWW----IVDCGITEGGVAS 426
Query: 186 TDLPVRTIVYPSYGI--GQPGVSGVLIVSYTWSLDASRIGSLVGDRPS---EEVLIKLCM 350
TDLP+RT VYPSY + G+ +G L+ SYTW+ DA+R+GSLV +R S EE L++L +
Sbjct: 427 TDLPLRTCVYPSYNLHDGKENPAG-LLASYTWAQDATRVGSLVNNRASPAGEEKLVELIL 485
Query: 351 ANLAEVH--NVPVATLQQLFVD-YKCWDWYNDDYSSGAFALYSPSQFFQLFPSLTKPSPD 521
+LA +H +P ++ F + + W D ++GAFAL+ P QF L+P LT+P+ D
Sbjct: 486 RDLALLHAETIPYDKIRAAFTGVHHAYLWPQDPNTAGAFALFGPGQFSNLYPYLTRPAAD 545
Query: 522 GRFHLAGEATSVHHGWVIGSLNSAYRSVDHIFQVEGLDELRAKLRFNWGFIDEVE 686
+FH+ GEA+S HH W++G+L+SA +V + L + +L W ++E+E
Sbjct: 546 SKFHIVGEASSAHHAWIVGALDSAVAAVLRFLKRFELRDQLRELEEKWEGVEELE 600
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,638,832,293
Number of extensions: 33628551
Number of successful extensions: 77909
Number of sequences better than 10.0: 164
Number of HSP's gapped: 77601
Number of HSP's successfully gapped: 167
Length of query: 324
Length of database: 1,051,180,864
Length adjustment: 129
Effective length of query: 195
Effective length of database: 633,664,753
Effective search space: 123564626835
Effective search space used: 123564626835
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
1 |
| VH (FL, L) |
41 |
| VF (FL, S) |
1 |
| AH (FL, L) |
2 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |