| Homology vs CSM-cDNA |
 |
| Homology vs DNA |
Query= Contig-U01974-1 (Contig-U01974-1Q) /CSM_Contig/Contig-U01974-1Q.Seq.d
(1306 letters)
Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU061046) Dictyostelium discoideum slug cDNA, clone SLC741. 299 e-170 3
(C93869) Dictyostelium discoideum slug cDNA, clone SSL810. 101 2e-88 6
(AU074769) Dictyostelium discoideum slug cDNA, clone SSL810. 272 3e-68 1
(AC116989) Dictyostelium discoideum chromosome 2 map 4545040... 178 4e-40 1
(AC150638) Bos taurus clone CH240-381L18, WORKING DRAFT SEQU... 52 0.055 1
(AC150494) Bos taurus clone CH240-452O9, WORKING DRAFT SEQUE... 52 0.055 1
(AC109798) Bos taurus clone RP42-71E11, WORKING DRAFT SEQUEN... 52 0.055 1
(AC109787) Bos taurus clone RP42-136O15, WORKING DRAFT SEQUE... 52 0.055 1
(AU073943) Dictyostelium discoideum slug cDNA, clone SSI810. 52 0.055 1
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 50 0.22 1
(CU457408) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 0.48 2
(CR182850) Forward strand read from insert in 5'HPRT inserti... 38 0.62 2
(BX511094) Zebrafish DNA sequence from clone CH211-137G12 in... 48 0.86 1
(AC158669) Mus musculus 6 BAC RP23-66K6 (Roswell Park Cancer... 48 0.86 1
(AC153639) Mus musculus 6 BAC RP23-124H2 (Roswell Park Cance... 48 0.86 1
(AC135860) Mus musculus BAC clone RP24-441J10 from chromosom... 48 0.86 1
(AC123823) Mus musculus BAC clone RP24-63C11 from chromosome... 48 0.86 1
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 48 0.86 1
(AC148273) Atelerix albiventris clone LB4-79I17, WORKING DRA... 48 0.86 1
(AC135363) Mus musculus chromosome UNK clone RP23-341B24, WO... 48 0.86 1
(AC131429) Rattus norvegicus clone CH230-193L4, *** SEQUENCI... 48 0.86 1
(AC120773) Rattus norvegicus clone CH230-65J6, WORKING DRAFT... 48 0.86 1
(AC117142) Rattus norvegicus clone CH230-392D15, *** SEQUENC... 48 0.86 1
(AC095104) Rattus norvegicus clone CH230-7J7, *** SEQUENCING... 48 0.86 1
(FP015974) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.86 1
(AC179049) Strongylocentrotus purpuratus clone R3-1108C21, W... 48 0.86 1
(AK086573) Mus musculus 15 days embryo head cDNA, RIKEN full... 48 0.86 1
(AK082001) Mus musculus 16 days embryo head cDNA, RIKEN full... 48 0.86 1
(DY892907) CeleSEQ12037 Cunninghamella elegans pBluescript (... 48 0.86 1
(DY890772) CeleSEQ7219 Cunninghamella elegans pBluescript (E... 48 0.86 1
(DY886544) CeleSEQ2237 Cunninghamella elegans pBluescript (E... 48 0.86 1
(BJ441100) Dictyostelium discoideum cDNA clone:ddv45m16, 3' ... 48 0.86 1
(BE656417) UI-M-BH0-ajx-c-10-0-UI.r1 NIH_BMAP_M_S1 Mus muscu... 48 0.86 1
(EY385459) CAXA5701.fwd CAXA Helobdella robusta Subtracted L... 48 0.86 1
(EY381939) CAXA3767.fwd CAXA Helobdella robusta Subtracted L... 48 0.86 1
(EY377240) CAXA16609.fwd CAXA Helobdella robusta Subtracted ... 48 0.86 1
(EY376153) CAXA1602.fwd CAXA Helobdella robusta Subtracted L... 48 0.86 1
(EY372286) CAXA13930.fwd CAXA Helobdella robusta Subtracted ... 48 0.86 1
(EY366163) CAXA10581.fwd CAXA Helobdella robusta Subtracted ... 48 0.86 1
(EY366068) CAXA10535.fwd CAXA Helobdella robusta Subtracted ... 48 0.86 1
(EY345235) CAWZ13745.fwd CAWZ Helobdella robusta Primary Lat... 48 0.86 1
(EY297215) CAWX13240.fwd CAWX Helobdella robusta Primary Ear... 48 0.86 1
(EJ006134) 1091138307070 Global-Ocean-Sampling_GS-26-01-01-1... 44 1.0 2
(DU481425) 1098415948729 CHORI-243 Ovis aries genomic clone ... 34 2.3 2
(BJ413284) Dictyostelium discoideum cDNA clone:ddv14o19, 5' ... 44 2.6 2
(BJ387056) Dictyostelium discoideum cDNA clone:dds12k03, 5' ... 44 2.8 2
(CS623759) Sequence 310 from Patent WO2006071466. 34 3.1 4
(BX324159) Zebrafish DNA sequence from clone CH211-10O1 in l... 46 3.4 1
(BV033845) S212P60346FD2.T0 CZECHII/Ei Mus musculus STS geno... 46 3.4 1
(AL928698) Mouse DNA sequence from clone RP23-183D18 on chro... 46 3.4 1
(AL591126) Mouse DNA sequence from clone RP23-188A3 on chrom... 46 3.4 1
(AC154487) Mus musculus BAC clone RP24-119I4 from chromosome... 46 3.4 1
(AC103388) Mus musculus chromosome 7, clone RP24-403B15, com... 46 3.4 1
(AM270075) Aspergillus niger contig An04c0140, complete genome. 46 3.4 1
(AB018117) Arabidopsis thaliana genomic DNA, chromosome 5, P... 46 3.4 1
(EA317434) Sequence 5 from patent US 7294760. 46 3.4 1
(DL235626) NOVEL COMPOSITIONS AND METHODS FOR CANCER. 46 3.4 1
(DD213130) The gene for progress after HCV infection, and us... 46 3.4 1
(DD159087) NOVEL COMPOSITIONS AND METHODS FOR CANCER. 46 3.4 1
(AX695545) Sequence 1172 from Patent WO03008583. 46 3.4 1
(AX508160) Sequence 2855 from Patent WO0216655. 46 3.4 1
(GM864423) Sequence 184 from Patent WO2008126107. 46 3.4 1
(GM864422) Sequence 183 from Patent WO2008126107. 46 3.4 1
(GC702038) Sequence 17283 from patent US 6812339. 46 3.4 1
(GC697465) Sequence 12710 from patent US 6812339. 46 3.4 1
(AF310887) Dictyostelium discoideum RacB (racB) gene, partia... 46 3.4 1
(AL050348) Human DNA sequence from clone RP3-447F3 on chromo... 46 3.4 1
(AL031905) Human DNA sequence from clone RP3-460D19 on chrom... 46 3.4 1
(AJ412894) Homo sapiens partial STAT5B gene for signal trans... 46 3.4 1
(AC099811) Homo sapiens chromosome 17, clone RP11-358B23, co... 46 3.4 1
(AC157781) Mus musculus chromosome 7 clone RP24-99K12 map 7,... 46 3.4 1
(AC120681) Rattus norvegicus clone CH230-79E4, WORKING DRAFT... 46 3.4 1
(AC069250) Homo sapiens chromosome 17 clone RP11-9B11, WORKI... 46 3.4 1
(AC067737) Homo sapiens chromosome 3 clone RP11-344G20, WORK... 46 3.4 1
(CU407257) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.4 1
(BX248513) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 3.4 1
(BX001052) Mouse DNA sequence *** SEQUENCING IN PROGRESS ***... 46 3.4 1
(AC019085) Homo sapiens chromosome 17 clone RP11-358B23, WOR... 46 3.4 1
(BH160267) ENTRX80TF Entamoeba histolytica Sheared DNA Entam... 46 3.4 1
(BH153141) ENTSS08TR Entamoeba histolytica Sheared DNA Entam... 46 3.4 1
(AZ027048) RPCI-23-346A14.TV RPCI-23 Mus musculus genomic cl... 46 3.4 1
(ET832683) CHO_OF809xn05f1.ab1 CHO_OF Nicotiana tabacum geno... 46 3.4 1
(EI856455) CAH1-2B18TR CAA1Ba Cicer arietinum genomic clone ... 46 3.4 1
(EI460041) PV_GBa0063C21.r PV_GBa Phaseolus vulgaris genomic... 46 3.4 1
(DX823803) Jalo EEP 558 Pv-TC787 Phaseolus vulgaris Jalo EEP... 46 3.4 1
(DX823658) Jalo EEP 558 Pv-1842 Phaseolus vulgaris Jalo EEP ... 46 3.4 1
(DX823277) BAT93 Pv-TC787 Phaseolus vulgaris BAT93 young lea... 46 3.4 1
(DX823138) BAT93 Pv-1842 Phaseolus vulgaris BAT93 young leav... 46 3.4 1
(EH010874) USDA-FP_183929 Lysiphlebus testaceipes adult whol... 46 3.4 1
(EH010405) USDA-FP_183507 Lysiphlebus testaceipes adult whol... 46 3.4 1
(AU053281) Dictyostelium discoideum slug cDNA, clone SLI309. 46 3.4 1
(AU033635) Dictyostelium discoideum slug cDNA, clone SLB253. 46 3.4 1
(CV542904) RTS_127_G02 Phaseolus vulgaris P- root EST librar... 46 3.4 1
(CV535791) NOD_221_A02 Phaseolus vulgaris nodule EST library... 46 3.4 1
(CV529591) ALV_011A_D11 Phaseolus vulgaris leaf EST library ... 46 3.4 1
(CK106324) UB17CPA11.5pR Populus active cambium cDNA library... 46 3.4 1
(CA900878) PCSC19776 Scarlet Runner Bean Suspensor Region Tr... 46 3.4 1
(CA900877) PCSC19726 Scarlet Runner Bean Suspensor Region Tr... 46 3.4 1
(CA900872) PCSC15501 Scarlet Runner Bean Suspensor Region Tr... 46 3.4 1
(CA900868) PCS05662 Scarlet Runner Bean Suspensor Region Tri... 46 3.4 1
(CA900867) PCS05101 Scarlet Runner Bean Suspensor Region Tri... 46 3.4 1
(CA900866) PCS02181 Scarlet Runner Bean Suspensor Region Tri... 46 3.4 1
(BQ357278) RC6-HT0678-290600-013-G06 HT0678 Homo sapiens cDN... 46 3.4 1
(BJ340959) Dictyostelium discoideum cDNA clone:dda4f14, 3' e... 46 3.4 1
(BF833522) CM4-HT0920-281000-387-d02 HT0920 Homo sapiens cDN... 46 3.4 1
(GD640572) 454PCS0268265 Scarlet Runner Bean globular-stage ... 46 3.4 1
(GD639272) 454PCS0266963 Scarlet Runner Bean globular-stage ... 46 3.4 1
(GD636133) 454PCS0263824 Scarlet Runner Bean globular-stage ... 46 3.4 1
(GD607739) 454PCS0235430 Scarlet Runner Bean globular-stage ... 46 3.4 1
(GD576838) 454PCS0204529 Scarlet Runner Bean globular-stage ... 46 3.4 1
(GD562574) 454PCS0190265 Scarlet Runner Bean globular-stage ... 46 3.4 1
(GD556272) 454PCS0183963 Scarlet Runner Bean globular-stage ... 46 3.4 1
(GD554325) 454PCS0182016 Scarlet Runner Bean globular-stage ... 46 3.4 1
(GD552621) 454PCS0180312 Scarlet Runner Bean globular-stage ... 46 3.4 1
(GD489036) 454PCS0116742 Scarlet Runner Bean globular-stage ... 46 3.4 1
(GD427088) 454PCS0054779 Scarlet Runner Bean globular-stage ... 46 3.4 1
(FE699541) Pv025C_M13R_B02.ab1 Phaseolus vulgaris cv Early g... 46 3.4 1
(FE699540) Pv025C_M13F_B02.ab1 Phaseolus vulgaris cv Early g... 46 3.4 1
(FE699538) Pv047A_M13R_D05.ab1 Phaseolus vulgaris cv Early g... 46 3.4 1
(FE421341) CBTX2515.fwd CBTX_Daphnia_pulex_Chosen_One_Librar... 46 3.4 1
(FE421340) CBTX2515.rev CBTX_Daphnia_pulex_Chosen_One_Librar... 46 3.4 1
(FE379669) CBNS4019.fwd CBNS_Daphnia_pulex_Chosen_One_Librar... 46 3.4 1
(FE379668) CBNS4019.rev CBNS_Daphnia_pulex_Chosen_One_Librar... 46 3.4 1
(FD789557) 07VANA7_T7_018_G04_25FEB2006_020 07VANA7 Phaseolu... 46 3.4 1
(FD564795) RS1FR74TF RS1(AR) Raphanus sativus var. oleiformi... 46 3.4 1
(EY384325) CAXA5086.fwd CAXA Helobdella robusta Subtracted L... 46 3.4 1
(EY368662) CAXA11936.fwd CAXA Helobdella robusta Subtracted ... 46 3.4 1
(EY366963) CAXA11006.fwd CAXA Helobdella robusta Subtracted ... 46 3.4 1
(EK044568) 1092959542141 Global-Ocean-Sampling_GS-31-01-01-1... 40 3.6 2
(CW778730) OP__Ba0083E10.f OP__Ba Oryza punctata genomic clo... 38 5.0 3
(AY645033) Empis livida even-skipped mRNA, partial cds. 32 9.8 3
>(AU061046) Dictyostelium discoideum slug cDNA, clone SLC741.
Length = 506
Score = 299 bits (151), Expect(3) = e-170
Identities = 151/151 (100%)
Strand = Plus / Plus
Query: 356 ttgatattataaaaacaattaatgaaatatcaaacgaacataaatcctttcaaccatttg 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ttgatattataaaaacaattaatgaaatatcaaacgaacataaatcctttcaaccatttg 415
Query: 416 aaattacaccaattaaaccacaatcaacttcaacaaatacctataataccgaatttggtg 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aaattacaccaattaaaccacaatcaacttcaacaaatacctataataccgaatttggtg 475
Query: 476 taatcaatcaaaatacttttgttttagattc 506
|||||||||||||||||||||||||||||||
Sbjct: 476 taatcaatcaaaatacttttgttttagattc 506
Score = 184 bits (93), Expect(3) = e-170
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 188 caacttcaaaaggtattcaattacctcgctttaatttattaaatacaagttcttctggtt 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 caacttcaaaaggtattcaattacctcgctttaatttattaaatacaagttcttctggtt 247
Query: 248 ttctaacaaatagtaatgatacattatttttgg 280
|||||||||||||||||||||||||||||||||
Sbjct: 248 ttctaacaaatagtaatgatacattatttttgg 280
Score = 178 bits (90), Expect(3) = e-170
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 caccatcattaccttcccattcatcatcatcacaacaacaacaaattaaaaaatcaaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caccatcattaccttcccattcatcatcatcacaacaacaacaaattaaaaaatcaaatt 60
Query: 61 ggtcttataaaccatctgctcaatcatctc 90
||||||||||||||||||||||||||||||
Sbjct: 61 ggtcttataaaccatctgctcaatcatctc 90
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 784,821,096
Number of extensions: 54755688
Number of successful extensions: 6024000
Number of sequences better than 10.0: 131
Length of query: 1306
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 1282
Effective length of database: 99,340,224,878
Effective search space: 127354168293596
Effective search space used: 127354168293596
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| Homology vs Protein |
Query= Contig-U01974-1 (Contig-U01974-1Q) /CSM_Contig/Contig-U01974-1Q.Seq.d
(1306 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF469736_1(EF469736|pid:none) Synthetic construct proline rich p... 54 1e-05
S22373(S22373) proline-rich protein - mouse &X63004_1(X63004|pi... 54 1e-05
AF085185_1(AF085185|pid:none) Acanthamoeba castellanii Myosin-IA... 49 3e-04
AC116989_2(AC116989|pid:none) Dictyostelium discoideum chromosom... 48 9e-04
A39066(A39066)proline-rich protein 4 - rat 47 0.001
BC171935_1(BC171935|pid:none) Mus musculus predicted gene, EG667... 47 0.001
AF200364_5(AF200364|pid:none) Cercopithecine herpesvirus 12 FGAR... 46 0.003
A42817(A42817)proline-rich protein precursor - rat 45 0.004
AY501356_1(AY501356|pid:none) Arabidopsis thaliana hypothetical ... 45 0.004
AB010070_19(AB010070|pid:none) Arabidopsis thaliana genomic DNA,... 45 0.004
M64793_1(M64793|pid:none) Rat salivary proline-rich protein (RP1... 45 0.006
B39066(B39066)proline-rich protein 15 - rat 45 0.006
CP000270_2923(CP000270|pid:none) Burkholderia xenovorans LB400 c... 45 0.006
AM420293_1312(AM420293|pid:none) Saccharopolyspora erythraea NRR... 45 0.006
(P05143) RecName: Full=Proline-rich protein 2; AltName: Full=Pro... 39 0.006
BC172602_1(BC172602|pid:none) Synthetic construct Mus musculus c... 39 0.006
D29149(D29149) proline-rich protein - mouse (fragment) &M19419_... 37 0.006
U68412_1(U68412|pid:none) Arenicola marina fibrillar collagen (F... 40 0.008
A36298(A36298)proline-rich protein PRB3M (null) - human (fragment) 44 0.010
AF192748_1(AF192748|pid:none) Lampetra fluviatilis synapsin Ib (... 44 0.010
AF192747_1(AF192747|pid:none) Lampetra fluviatilis synapsin Ia (... 44 0.010
BC141917_1(BC141917|pid:none) Homo sapiens proline-rich protein ... 44 0.010
EU687468_1(EU687468|pid:none) Plasmodium knowlesi isolate MPHG38... 44 0.013
S62928_1(S62928|pid:none) PRB1M=PRB1 medium length copy {exon 3}... 44 0.017
AF448525_1(AF448525|pid:none) Mytilus galloprovincialis precolla... 42 0.021
BA000040_4318(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 43 0.022
(Q2J728) RecName: Full=Translation initiation factor IF-2; &CP0... 43 0.022
AM746676_8950(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 43 0.022
AF015539_1(AF015539|pid:none) Mytilus edulis precollagen P (preC... 40 0.027
AF104910_1(AF104910|pid:none) Acanthamoeba castellanii myosin I ... 43 0.029
DQ399325_1(DQ399325|pid:none) Deinopis spinosa clone DM103 Flag ... 43 0.029
(Q5YSC6) RecName: Full=Translation initiation factor IF-2; 43 0.029
Y09000_1(Y09000|pid:none) R.norvegicus mRNA for dendrin. 43 0.029
AP006618_4082(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 43 0.029
CGRT1S(A90559;A90552;A92029;A90353;A90566;A90357;A90362;)collage... 39 0.035
BC096211_1(BC096211|pid:none) Homo sapiens proline-rich protein ... 42 0.037
BC160210_1(BC160210|pid:none) Synthetic construct Mus musculus c... 42 0.037
AB052835_1(AB052835|pid:none) Oncorhynchus mykiss COL1A1 mRNA fo... 41 0.043
AB008373_1(AB008373|pid:none) Oncorhynchus mykiss mRNA for alpha... 41 0.045
AM420293_7157(AM420293|pid:none) Saccharopolyspora erythraea NRR... 42 0.049
X07516_1(X07516|pid:none) Homo sapiens partial PRB1 gene for sal... 42 0.049
CP000781_4595(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 42 0.049
CP000656_2026(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 42 0.049
AF123252_1(AF123252|pid:none) Neocallimastix patriciarum endo-1,... 42 0.049
(P02812) RecName: Full=Basic salivary proline-rich protein 2; ... 42 0.049
S80905_1(S80905|pid:none) PRB2 (PRB2L CON1+)=Con1 {exon 3} [huma... 42 0.049
BC044827_1(BC044827|pid:none) Homo sapiens proline-rich protein ... 42 0.049
BC133083_1(BC133083|pid:none) Danio rerio zgc:158335, mRNA (cDNA... 40 0.055
(Q9YIB4) RecName: Full=Collagen alpha-1(I) chain; AltName: Full=... 34 0.056
(O93484) RecName: Full=Collagen alpha-2(I) chain; AltName: Full=... 35 0.056
AB008372_1(AB008372|pid:none) Oncorhynchus mykiss mRNA for alpha... 35 0.057
CP001131_2302(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 42 0.064
CP001052_2575(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 42 0.064
CT573213_597(CT573213|pid:none) Frankia alni str. ACN14A chromos... 42 0.064
AE017221_447(AE017221|pid:none) Thermus thermophilus HB27, compl... 42 0.064
CP000053_1290(CP000053|pid:none) Rickettsia felis URRWXCal2, com... 42 0.064
M12099_1(M12099|pid:none) Mouse PRP gene encoding proline-rich p... 41 0.083
DQ149153_57(DQ149153|pid:none) Cercopithecine herpesvirus 16 str... 41 0.083
CP000820_4073(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 41 0.083
M64791_1(M64791|pid:none) Rat salivary proline-rich protein (RP4... 41 0.083
BC055077_1(BC055077|pid:none) Mus musculus collagen, type V, alp... 35 0.093
BC168784_1(BC168784|pid:none) Xenopus tropicalis cDNA clone MGC:... 39 0.093
B36298(B36298)proline-rich protein PRB3S (cys) - human (fragment) 41 0.11
AJ704629_1(AJ704629|pid:none) Danio rerio mRNA for PrP2 protein. 41 0.11
(Q641Z8) RecName: Full=Peflin; AltName: Full=PEF protein with a ... 41 0.11
EF577429_1(EF577429|pid:none) Trypanosoma brucei TREU927 formin ... 41 0.11
CP000325_3513(CP000325|pid:none) Mycobacterium ulcerans Agy99, c... 41 0.11
AM269977_33(AM269977|pid:none) Aspergillus niger contig An01c030... 41 0.11
(Q47RV1) RecName: Full=Translation initiation factor IF-2; &CP0... 41 0.11
EU834232_1(EU834232|pid:none) Synthetic construct triblock prote... 41 0.11
CP000249_263(CP000249|pid:none) Frankia sp. CcI3, complete genome. 40 0.14
AJ620614_1(AJ620614|pid:none) Danio rerio mRNA for prion protein... 40 0.14
CP001359_2383(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 40 0.14
AY744266_1(AY744266|pid:none) Danio rerio prion protein (prp) ge... 40 0.14
AM743169_3082(AM743169|pid:none) Stenotrophomonas maltophilia K2... 40 0.14
AY390001_1(AY390001|pid:none) Danio rerio prion protein long iso... 40 0.14
K03206_1(K03206|pid:none) Human PRB1 locus salivary proline-rich... 40 0.14
AF029249_1(AF029249|pid:none) Mytilus edulis precollagen D (preC... 40 0.14
BC060753_1(BC060753|pid:none) Xenopus laevis hypothetical protei... 37 0.15
AB275456_1(AB275456|pid:none) Carassius auratus COL1A3 mRNA for ... 33 0.15
AM746676_2519(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 33 0.17
AY666015_63(AY666015|pid:none) Grouper iridovirus, complete geno... 35 0.17
(Q9LKA5) RecName: Full=Uncharacterized protein At3g15000, mitoch... 40 0.18
AF000298_8(AF000298|pid:none) Caenorhabditis elegans cosmid W03D... 40 0.18
AF000298_11(AF000298|pid:none) Caenorhabditis elegans cosmid W03... 40 0.18
CP000820_7089(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 40 0.18
BC169791_1(BC169791|pid:none) Xenopus laevis papillary renal cel... 40 0.18
CR382129_150(CR382129|pid:none) Yarrowia lipolytica strain CLIB1... 40 0.18
A30496(A30496) proline-rich protein 13 - rat &M64792_1(M64792|p... 40 0.18
BC154741_1(BC154741|pid:none) Danio rerio prion protein, related... 40 0.18
(P02457) RecName: Full=Collagen alpha-1(I) chain; AltName: Full=... 40 0.18
CGCH1S(A90458;A90181;A02857)collagen alpha 1(I) chain - chicken ... 40 0.18
CP001628_658(CP001628|pid:none) Micrococcus luteus NCTC 2665, co... 40 0.18
BC107989_1(BC107989|pid:none) Danio rerio prion protein, related... 40 0.18
CR354588_1(CR354588|pid:none) Zebrafish DNA sequence from clone ... 36 0.20
AK220558_1(AK220558|pid:none) Mus musculus mRNA for mKIAA4231 pr... 37 0.20
AK041115_1(AK041115|pid:none) Mus musculus adult male aorta and ... 37 0.20
AK048546_1(AK048546|pid:none) Mus musculus 16 days embryo head c... 37 0.20
BC052398_1(BC052398|pid:none) Mus musculus collagen, type III, a... 37 0.20
(P08121) RecName: Full=Collagen alpha-1(III) chain; Flags: Precu... 37 0.20
AB015440_1(AB015440|pid:none) Rana catesbeiana mRNA for alpha 1 ... 38 0.20
T45467(T45467) collagen alpha 1(II) chain precursor [imported] -... 38 0.20
(P02459) RecName: Full=Collagen alpha-1(II) chain; AltName: Full... 38 0.21
X96713_1(X96713|pid:none) G.pallida mRNA for collagen. 40 0.24
EF407946_23(EF407946|pid:none) Thermus sp. 4C plasmid pL4C, comp... 40 0.24
(Q84ZL0) RecName: Full=Formin-like protein 5; AltName: Full=OsFH5; 40 0.24
(Q1IIT3) RecName: Full=Translation initiation factor IF-2; &CP0... 40 0.24
(Q73VV4) RecName: Full=Translation initiation factor IF-2; &AE0... 40 0.24
DQ812520_4(DQ812520|pid:none) Spironucleus barkhanus isolate Sp3... 40 0.24
AP008213_1503(AP008213|pid:none) Oryza sativa (japonica cultivar... 40 0.24
CP000449_851(CP000449|pid:none) Maricaulis maris MCS10, complete... 40 0.24
(Q3U962) RecName: Full=Collagen alpha-2(V) chain; Flags: Precurs... 35 0.26
AK147328_1(AK147328|pid:none) Mus musculus 14 days pregnant adul... 35 0.26
(Q96IT5) RecName: Full=Collagen alpha-1(II) chain; AltName: Full... 38 0.26
AF023169_1(AF023169|pid:none) Canis familiaris type IIA procolla... 38 0.26
(P13941) RecName: Full=Collagen alpha-1(III) chain; Flags: Precu... 37 0.26
X16468_1(X16468|pid:none) Human mRNA for alpha-1 type II collagen. 38 0.26
BC043696_1(BC043696|pid:none) Mus musculus collagen, type V, alp... 35 0.26
T15779(T15779) hypothetical protein C35B8.1 - Caenorhabditis ele... 37 0.28
BX664747_9(BX664747|pid:none) Zebrafish DNA sequence from clone ... 29 0.28
BC128192_1(BC128192|pid:none) Homo sapiens proline-rich protein ... 39 0.32
(P35085) RecName: Full=Calcium-binding protein P; 39 0.32
(P10164) RecName: Full=Acidic proline-rich protein PRP25; Flags:... 39 0.32
CP000113_2249(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 39 0.32
AF259079_1(AF259079|pid:none) Danio rerio snRNP-associated prote... 39 0.32
(Q1DQC1) RecName: Full=Actin cytoskeleton-regulatory complex pro... 39 0.32
BC141916_1(BC141916|pid:none) Homo sapiens proline-rich protein ... 39 0.32
AF184899_1(AF184899|pid:none) Streptomyces lividans putative xyl... 39 0.32
(P02810) RecName: Full=Salivary acidic proline-rich phosphoprote... 39 0.32
(Q6LDI9) RecName: Full=Collagen alpha-1(II) chain; AltName: Full... 37 0.33
BC066384_1(BC066384|pid:none) Danio rerio collagen, type I, alph... 39 0.33
M65161_3(M65161|pid:none) Mouse pro-alpha1 (II) collagen chain g... 37 0.33
BC051383_1(BC051383|pid:none) Mus musculus collagen, type II, al... 37 0.33
AE016823_1903(AE016823|pid:none) Leptospira interrogans serovar ... 39 0.41
PIHUSD(S03176;S03175;S10890;D25372;E38355;A03295;A61294;)salivar... 39 0.41
CU928173_206(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 39 0.41
CR382132_929(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 39 0.41
AE010300_1946(AE010300|pid:none) Leptospira interrogans serovar ... 39 0.41
CU928179_156(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 39 0.41
BC058045_1(BC058045|pid:none) Danio rerio collagen, type I, alph... 39 0.41
(P16818) RecName: Full=Uncharacterized protein UL61; &S09824(S0... 39 0.41
(P04474) RecName: Full=Acidic proline-rich protein PRP33; AltNam... 39 0.41
AL939111_114(AL939111|pid:none) Streptomyces coelicolor A3(2) co... 39 0.41
AM487157_4(AM487157|pid:none) Vitis vinifera contig VV78X047840.... 39 0.41
AL731564_1(AL731564|pid:none) Zebrafish DNA sequence from clone ... 34 0.43
BC000714_1(BC000714|pid:none) Homo sapiens cleavage and polyaden... 29 0.45
S57447(S57447;S57489) HPBRII-7 protein - human &X67336_1(X67336... 29 0.45
AK048615_1(AK048615|pid:none) Mus musculus 16 days embryo head c... 29 0.45
(Q6NVF9) RecName: Full=Cleavage and polyadenylation specificity ... 29 0.45
AK222633_1(AK222633|pid:none) Homo sapiens mRNA for small nuclea... 39 0.54
BC151395_1(BC151395|pid:none) Bos taurus single stranded DNA bin... 39 0.54
U40766_1(U40766|pid:none) Meloidogyne incognita cuticle collagen... 39 0.54
AK158894_1(AK158894|pid:none) Mus musculus visual cortex cDNA, R... 39 0.54
X16163_1(X16163|pid:none) Human mRNA for SmB/B' autoimmune antig... 39 0.54
C34503(C34503)small nuclear ribonucleoprotein-associated protein... 39 0.54
U03413_1(U03413|pid:none) Dictyostelium discoideum AX2 calcium b... 39 0.54
AK001217_1(AK001217|pid:none) Homo sapiens cDNA FLJ10355 fis, cl... 39 0.54
BC125663_1(BC125663|pid:none) Xenopus tropicalis single stranded... 39 0.54
CP000820_1832(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 39 0.54
CP000056_752(CP000056|pid:none) Streptococcus pyogenes MGAS6180,... 39 0.54
AK123119_1(AK123119|pid:none) Homo sapiens cDNA FLJ41124 fis, cl... 39 0.54
AK011509_1(AK011509|pid:none) Mus musculus 10 days embryo whole ... 39 0.54
AK164154_1(AK164154|pid:none) Mus musculus adult male hippocampu... 39 0.54
(Q9BWW4) RecName: Full=Single-stranded DNA-binding protein 3; Al... 39 0.54
BC096212_1(BC096212|pid:none) Homo sapiens proline-rich protein ... 39 0.54
(P63162) RecName: Full=Small nuclear ribonucleoprotein-associate... 39 0.54
AL731609_12(AL731609|pid:none) Oryza sativa genomic DNA, chromos... 39 0.54
BC168065_1(BC168065|pid:none) Xenopus tropicalis cDNA clone MGC:... 39 0.54
(Q9TU66) RecName: Full=Small nuclear ribonucleoprotein-associate... 39 0.54
AY451316_1(AY451316|pid:none) Echinometra vanbrunti clone RT4.15... 39 0.54
AY313162_1(AY313162|pid:none) Cyprinus carpio prion-like protein... 39 0.54
AM420293_827(AM420293|pid:none) Saccharopolyspora erythraea NRRL... 30 0.59
CP000667_1313(CP000667|pid:none) Salinispora tropica CNB-440, co... 29 0.59
AF063665_1(AF063665|pid:none) Mus musculus small nuclear ribonuc... 38 0.70
A29149(A29149) proline-rich protein - mouse &M11900_1(M11900|pi... 38 0.70
(Q9QZR9) RecName: Full=Collagen alpha-4(IV) chain; Flags: Precur... 38 0.70
CP000580_1366(CP000580|pid:none) Mycobacterium sp. JLS, complete... 38 0.70
AP008217_1406(AP008217|pid:none) Oryza sativa (japonica cultivar... 38 0.70
BC117709_1(BC117709|pid:none) Mus musculus collagen, type IV, al... 38 0.70
AY451322_1(AY451322|pid:none) Echinometra vanbrunti clone RT4.45... 38 0.70
CP001176_1947(CP001176|pid:none) Bacillus cereus B4264, complete... 38 0.70
CP000943_5744(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 38 0.70
AP006618_4394(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 38 0.70
AC125735_34(AC125735|pid:none) Leishmania major strain Friedlin ... 38 0.70
BC128191_1(BC128191|pid:none) Homo sapiens proline-rich protein ... 38 0.70
(Q17QN3) RecName: Full=Small nuclear ribonucleoprotein-associate... 38 0.70
CP001029_822(CP001029|pid:none) Methylobacterium populi BJ001, c... 38 0.70
AE017346_387(AE017346|pid:none) Cryptococcus neoformans var. neo... 38 0.70
AM920427_1234(AM920427|pid:none) Penicillium chrysogenum Wiscons... 38 0.70
AY451321_1(AY451321|pid:none) Echinometra vanbrunti clone RT4.44... 38 0.70
X07704_1(X07704|pid:none) H.sapiens PRB4 gene, allele M. 38 0.70
DQ267495_4(DQ267495|pid:none) Uncultured delta proteobacterium D... 38 0.70
CP001358_1817(CP001358|pid:none) Desulfovibrio desulfuricans sub... 38 0.70
AK142553_1(AK142553|pid:none) Mus musculus 0 day neonate kidney ... 38 0.70
(Q96QB0) RecName: Full=Collagen alpha-2(V) chain; Flags: Precurs... 34 0.71
AB209597_1(AB209597|pid:none) Homo sapiens mRNA for Collagen alp... 38 0.71
AX167114_1(AX167114|pid:none) Sequence 1 from Patent WO0144455. ... 38 0.71
(Q9UML6) RecName: Full=Collagen alpha-1(I) chain; AltName: Full=... 38 0.71
AF017178_1(AF017178|pid:none) Homo sapiens pro alpha 1(I) collag... 38 0.71
CGHU1S(I60114;S01143;A93335;I55254;A39943;I55237;A35233;)collage... 38 0.71
U40187_5(U40187|pid:none) Caenorhabditis elegans cosmid F11H8, c... 30 0.71
U40187_4(U40187|pid:none) Caenorhabditis elegans cosmid F11H8, c... 30 0.71
AM991099_1(AM991099|pid:none) Danio rerio mRNA for collagen type... 35 0.72
BC086874_1(BC086874|pid:none) Homo sapiens collagen, type V, alp... 34 0.72
X98705_1(X98705|pid:none) H.sapiens DNA sequence of COL1A1 gene ... 38 0.72
AF062008_1(AF062008|pid:none) Caenorhabditis elegans cyk-1 mRNA,... 30 0.72
M20789_1(M20789|pid:none) Human, alpha 1 collagen type I gene, e... 32 0.75
(Q55A45) RecName: Full=Small nuclear ribonucleoprotein-associate... 31 0.79
AC116920_12(AC116920|pid:none) Dictyostelium discoideum chromoso... 31 0.79
AY046949_1(AY046949|pid:none) Gallus gallus alpha 1 type IIA col... 35 0.91
CP000113_1388(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 38 0.92
(A4TCF8) RecName: Full=Translation initiation factor IF-2; &CP0... 38 0.92
DQ288864_1(DQ288864|pid:none) Sparus aurata stPrP1 mRNA, complet... 38 0.92
BC136499_1(BC136499|pid:none) Homo sapiens proline-rich protein ... 38 0.92
BC140666_1(BC140666|pid:none) Bos taurus penta-EF-hand domain co... 38 0.92
CP000820_7165(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 38 0.92
AF206244_1(AF206244|pid:none) Babesia microti strain MN1 serorea... 38 0.92
BC064553_1(BC064553|pid:none) Homo sapiens proline-rich protein ... 38 0.92
DQ217171_1(DQ217171|pid:none) Taeniopygia guttata clone 0058P003... 38 0.92
AM889285_3544(AM889285|pid:none) Gluconacetobacter diazotrophicu... 38 0.92
CP000480_5091(CP000480|pid:none) Mycobacterium smegmatis str. MC... 38 0.92
A27307(A27307)proline-rich phosphoprotein (gene PRH1, Db allele)... 38 0.92
CP000249_693(CP000249|pid:none) Frankia sp. CcI3, complete genome. 38 0.92
CT573213_50(CT573213|pid:none) Frankia alni str. ACN14A chromoso... 38 0.92
BC067325_1(BC067325|pid:none) Xenopus tropicalis SNRPN upstream ... 38 0.92
(B1VGC2) RecName: Full=Translation initiation factor IF-2; &AM9... 38 0.92
CP000820_5505(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 33 0.95
AF319523_1(AF319523|pid:none) Homo sapiens RT-LI mRNA, complete ... 37 1.2
(P14678) RecName: Full=Small nuclear ribonucleoprotein-associate... 37 1.2
(Q9TU67) RecName: Full=Small nuclear ribonucleoprotein-associate... 37 1.2
AY451319_1(AY451319|pid:none) Echinometra vanbrunti clone RT4.34... 37 1.2
AM710391_1(AM710391|pid:none) Ambrosia artemisiifolia partial mR... 37 1.2
AM710392_1(AM710392|pid:none) Ambrosia artemisiifolia partial mR... 37 1.2
AY601635_8(AY601635|pid:none) Human adenovirus type 5 strain NHR... 37 1.2
BC136398_1(BC136398|pid:none) Homo sapiens dendrin, mRNA (cDNA c... 37 1.2
(O94850) RecName: Full=Dendrin; 37 1.2
BT059014_1(BT059014|pid:none) Salmo salar clone ssal-rgf-520-138... 37 1.2
M34082_1(M34082|pid:none) Human small nuclear ribonucleoprotein ... 37 1.2
D40750(D40750)proline-rich protein PRB1/2S (EA) - human (fragment) 37 1.2
AM238667_1(AM238667|pid:none) Bordetella pertussis tcfA gene for... 37 1.2
AY261320_1(AY261320|pid:none) Echinometra sp. C isolate T-Ptm11_... 37 1.2
U68729_1(U68729|pid:none) Meloidogyne incognita cuticle preproco... 37 1.2
BX294092_4(BX294092|pid:none) Neurospora crassa DNA linkage grou... 37 1.2
AY292861_2(AY292861|pid:none) Boechera drummondii zing finger tr... 37 1.2
BC098731_1(BC098731|pid:none) Rattus norvegicus splicing factor ... 37 1.2
(A9WPV8) RecName: Full=Translation initiation factor IF-2; &CP0... 37 1.2
AK223322_1(AK223322|pid:none) Homo sapiens mRNA for splicing fac... 30 1.3
AY617062_1(AY617062|pid:none) Illex coindetii rhodopsin gene, pa... 33 1.3
AF176645_1(AF176645|pid:none) Mus musculus collagen type V alpha... 35 1.5
AF272661_1(AF272661|pid:none) Rattus norvegicus alpha 4 type V c... 35 1.5
S59856(S59856;S62120;S16373)collagen alpha 1(III) chain precurso... 34 1.5
AF170906_1(AF170906|pid:none) Mus musculus Lck-associated signal... 37 1.6
CP001349_6308(CP001349|pid:none) Methylobacterium nodulans ORS 2... 37 1.6
EDBEIF(S04713)immediate-early protein IE180 - suid herpesvirus 1... 37 1.6
AY360392_12(AY360392|pid:none) Oryza sativa (japonica cultivar-g... 37 1.6
BC120071_1(BC120071|pid:none) Bos taurus chromosome 7 open readi... 37 1.6
AM238663_984(AM238663|pid:none) Streptomyces ambofaciens ATCC 23... 37 1.6
AF218623_1(AF218623|pid:none) Nephila madagascariensis flagellif... 37 1.6
AB052836_1(AB052836|pid:none) Oncorhynchus mykiss COL1A3 mRNA fo... 37 1.6
AF500117_1(AF500117|pid:none) Mus musculus single-stranded DNA-b... 37 1.6
AK153733_1(AK153733|pid:none) Mus musculus 3 days neonate thymus... 37 1.6
(Q9AC25) RecName: Full=Translation initiation factor IF-2; 37 1.6
BC060789_1(BC060789|pid:none) Homo sapiens collectin sub-family ... 37 1.6
AF457206_1(AF457206|pid:none) Drosophila melanogaster pygopus mR... 37 1.6
AL161644_6(AL161644|pid:none) Human DNA sequence from clone RP5-... 37 1.6
AY261307_1(AY261307|pid:none) Echinometra sp. C isolate T-OK203_... 37 1.6
BA000030_3563(BA000030|pid:none) Streptomyces avermitilis MA-468... 37 1.6
BC090694_1(BC090694|pid:none) Danio rerio calymmin, mRNA (cDNA c... 37 1.6
CP001213_388(CP001213|pid:none) Bifidobacterium animalis subsp. ... 37 1.6
(Q9R050) RecName: Full=Single-stranded DNA-binding protein 3; Al... 37 1.6
EU826466_82(EU826466|pid:none) Mycobacterium phage Myrna, comple... 37 1.6
BT048069_1(BT048069|pid:none) Salmo salar clone ssal-rgb2-515-36... 37 1.6
AE016958_2694(AE016958|pid:none) Mycobacterium avium subsp. para... 37 1.6
AB038518_1(AB038518|pid:none) Homo sapiens SRCL mRNA for scaveng... 37 1.6
AE005673_42(AE005673|pid:none) Caulobacter crescentus CB15, comp... 37 1.6
CGBO6C(A90369;A90396;A92210;S03940;A90189;A05039;A02859)collagen... 35 1.6
(P33477) RecName: Full=Annexin A11; AltName: Full=Annexin-11; Al... 30 1.6
CT573213_5925(CT573213|pid:none) Frankia alni str. ACN14A chromo... 28 1.6
(Q6AYL5) RecName: Full=Splicing factor 3B subunit 4; &(Q8QZY9) ... 30 1.6
AP007255_204(AP007255|pid:none) Magnetospirillum magneticum AMB-... 35 1.7
(P02453) RecName: Full=Collagen alpha-1(I) chain; AltName: Full=... 35 1.9
(P12105) RecName: Full=Collagen alpha-1(III) chain; Flags: Precu... 33 2.0
EU678348_1(EU678348|pid:none) Haemophilus parasuis strain Nagasa... 28 2.0
AY029208_1(AY029208|pid:none) Homo sapiens type VI collagen alph... 33 2.0
AF043944_1(AF043944|pid:none) Mytilus edulis nongradient byssal ... 32 2.0
I50694(I50694) collagen alpha 1(III) chain - chicken (fragment) ... 33 2.0
BC073482_1(BC073482|pid:none) Xenopus laevis hypothetical protei... 37 2.0
BC087802_1(BC087802|pid:none) Xenopus tropicalis Wiskott-Aldrich... 37 2.0
AL035669_10(AL035669|pid:none) Human DNA sequence from clone RP5... 37 2.0
(Q14050) RecName: Full=Collagen alpha-3(IX) chain; Flags: Precur... 37 2.0
AB034251_1(AB034251|pid:none) Homo sapiens NSR2 mRNA for nurse c... 37 2.0
(Q9M291) RecName: Full=Protein transport protein Sec24-like CEF;... 37 2.0
AY261274_1(AY261274|pid:none) Echinometra sp. C isolate T-Ftm8_A... 37 2.0
CP000820_5853(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 37 2.0
BC158507_1(BC158507|pid:none) Xenopus tropicalis Wiskott-Aldrich... 37 2.0
CP000480_5332(CP000480|pid:none) Mycobacterium smegmatis str. MC... 37 2.0
(Q8R105) RecName: Full=Vacuolar protein sorting-associated prote... 37 2.0
BX324141_1(BX324141|pid:none) Zebrafish DNA sequence from clone ... 37 2.0
FJ594763_1(FJ594763|pid:none) Equus asinus collagen alpha-1 type... 37 2.0
AF026802_1(AF026802|pid:none) Homo sapiens alpha-3 type IX colla... 37 2.0
AY597281_24(AY597281|pid:none) Pseudomonas viridiflava strain ME... 37 2.0
BC004412_1(BC004412|pid:none) Homo sapiens, clone IMAGE:3640176,... 37 2.0
BC163491_1(BC163491|pid:none) Danio rerio dishevelled associated... 37 2.0
CP000613_3738(CP000613|pid:none) Rhodospirillum centenum SW, com... 37 2.0
AY892914_1(AY892914|pid:none) Synthetic construct Homo sapiens c... 37 2.0
L41162_1(L41162|pid:none) Homo sapiens collagen alpha 3 type IX ... 37 2.0
AL138641_2(AL138641|pid:none) Arabidopsis thaliana DNA chromosom... 37 2.0
CQ783344_1(CQ783344|pid:none) Sequence 3484 from Patent EP1396543. 37 2.0
CP000820_2335(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 32 2.0
AC010894_2(AC010894|pid:none) Homo sapiens BAC clone RP11-483E17... 34 2.1
(Q28247) RecName: Full=Collagen alpha-5(IV) chain; Flags: Precur... 31 2.5
AY078501_1(AY078501|pid:none) Canis familiaris type IV collagen ... 31 2.5
CGHU2V(A31427;A54555;S43643;A25874;I55239;I59025;A25374;) collag... 32 2.5
S21626(S57243;S16374;A23982;I49559;I49557;S39789;I48300;) collag... 35 2.5
BC133728_1(BC133728|pid:none) Rattus norvegicus collagen, type I... 30 2.5
M92040_1(M92040|pid:none) Strongylocentrotus purpuratus alpha 1 ... 31 2.5
(P02465) RecName: Full=Collagen alpha-2(I) chain; AltName: Full=... 33 2.5
BC059281_1(BC059281|pid:none) Mus musculus collagen, type I, alp... 30 2.5
AM947022_1(AM947022|pid:none) Danio rerio partial mRNA for colla... 32 2.5
X04758_1(X04758|pid:none) Human mRNA for pro-alpha 2 (V) collage... 32 2.5
AE013599_1291(AE013599|pid:none) Drosophila melanogaster chromos... 33 2.6
BT022850_1(BT022850|pid:none) Drosophila melanogaster IP13040 fu... 33 2.7
U24189_3(U24189|pid:none) Caenorhabditis elegans hypothetical pr... 36 2.7
BX927156_178(BX927156|pid:none) Corynebacterium glutamicum ATCC ... 36 2.7
AK077579_1(AK077579|pid:none) Mus musculus 8 days embryo whole b... 36 2.7
CP001620_1088(CP001620|pid:none) Corynebacterium kroppenstedtii ... 36 2.7
(Q96G74) RecName: Full=OTU domain-containing protein 5; ... 36 2.7
BC008997_1(BC008997|pid:none) Mus musculus annexin A7, mRNA (cDN... 36 2.7
JC5437(JC5437)spliceosome-associated protein 49 - Caenorhabditis... 36 2.7
AP009493_3564(AP009493|pid:none) Streptomyces griseus subsp. gri... 36 2.7
(Q8TAP9) RecName: Full=TTD non-photosensitive 1 protein; &AK290... 36 2.7
M63595_1(M63595|pid:none) Xenopus laevis alpha-1 collagen type I... 36 2.7
AY451318_1(AY451318|pid:none) Echinometra vanbrunti clone RT4.24... 36 2.7
B40333(B40333)collagen alpha 1(II) chain precursor - African cla... 36 2.7
CU633899_57(CU633899|pid:none) Podospora anserina genomic DNA ch... 36 2.7
AX405810_1(AX405810|pid:none) Sequence 225 from Patent WO0222660. 36 2.7
(A0JUU0) RecName: Full=Translation initiation factor IF-2; &CP0... 36 2.7
AK151438_1(AK151438|pid:none) Mus musculus bone marrow macrophag... 36 2.7
(P23246) RecName: Full=Splicing factor, proline- and glutamine-r... 36 2.7
AM889285_3605(AM889285|pid:none) Gluconacetobacter diazotrophicu... 36 2.7
CP000384_21(CP000384|pid:none) Mycobacterium sp. MCS, complete g... 36 2.7
BT072469_1(BT072469|pid:none) Salmo salar clone ssal-rgf-526-328... 36 2.7
AE014296_1228(AE014296|pid:none) Drosophila melanogaster chromos... 36 2.7
AY451313_1(AY451313|pid:none) Echinometra vanbrunti clone RT1.EV... 36 2.7
AM420293_6478(AM420293|pid:none) Saccharopolyspora erythraea NRR... 36 2.7
CP001601_1847(CP001601|pid:none) Corynebacterium aurimucosum ATC... 36 2.7
(A1R516) RecName: Full=Translation initiation factor IF-2; &CP0... 36 2.7
(Q82K53) RecName: Full=Translation initiation factor IF-2; &BA0... 36 2.7
(Q6P4Z2) RecName: Full=Collagen alpha-1(II) chain; AltName: Full... 36 2.7
CP000283_474(CP000283|pid:none) Rhodopseudomonas palustris BisB5... 36 2.7
AK134589_1(AK134589|pid:none) Mus musculus adult male medulla ob... 36 2.7
CP000325_22(CP000325|pid:none) Mycobacterium ulcerans Agy99, com... 36 2.7
AL032652_6(AL032652|pid:none) Caenorhabditis elegans YAC Y63D3A,... 36 2.7
CP001324_47(CP001324|pid:none) Micromonas sp. RCC299 chromosome ... 36 2.7
(Q91717) RecName: Full=Collagen alpha-1(II) chain; AltName: Full... 36 2.7
BC056827_1(BC056827|pid:none) Danio rerio zgc:63791, mRNA (cDNA ... 36 2.7
BC051192_1(BC051192|pid:none) Homo sapiens splicing factor proli... 36 2.7
CT573213_1489(CT573213|pid:none) Frankia alni str. ACN14A chromo... 36 2.7
AK301271_1(AK301271|pid:none) Homo sapiens cDNA FLJ56555 complet... 36 2.7
CP000698_525(CP000698|pid:none) Geobacter uraniireducens Rf4, co... 36 2.7
DQ399329_1(DQ399329|pid:none) Deinopis spinosa clone DM133 MaSp2... 36 2.7
AY451308_1(AY451308|pid:none) Echinometra vanbrunti clone G3.115... 36 2.7
AB087408_1(AB087408|pid:none) Arabidopsis thaliana CHUP1 mRNA fo... 36 2.7
(Q07076) RecName: Full=Annexin A7; AltName: Full=Annexin-7; AltN... 36 2.7
(Q09442) RecName: Full=Splicing factor 3B subunit 4; AltName: Fu... 36 2.7
CP001280_225(CP001280|pid:none) Methylocella silvestris BL2, com... 36 2.7
BC004534_1(BC004534|pid:none) Homo sapiens splicing factor proli... 36 2.7
AJ504718_1(AJ504718|pid:none) Mus musculus mRNA for protein phos... 36 2.7
(Q67FY3) RecName: Full=B-cell CLL/lymphoma 9-like protein; ... 36 2.7
CR318650_2(CR318650|pid:none) Zebrafish DNA sequence from clone ... 32 2.8
AJ243805_1(AJ243805|pid:none) Ascaris suum mRNA for putative cut... 31 2.8
AF035410_1(AF035410|pid:none) Ascaris suum cuticular collagen (c... 31 2.8
(Q63870) RecName: Full=Collagen alpha-1(VII) chain; AltName: Ful... 33 3.1
U32107_1(U32107|pid:none) Mus musculus type VII collagen (Col7a1... 33 3.1
EU678344_1(EU678344|pid:none) Haemophilus parasuis strain Nagasa... 28 3.1
(P02454) RecName: Full=Collagen alpha-1(I) chain; AltName: Full=... 28 3.2
(P02467) RecName: Full=Collagen alpha-2(I) chain; AltName: Full=... 33 3.2
AC097662_1(AC097662|pid:none) Homo sapiens BAC clone RP11-563C6 ... 33 3.3
M25984_1(M25984|pid:none) Gallus gallus alpha-2 type I collagen ... 33 3.3
S31521(S31521) collagen COLF1 - freshwater sponge (Ephydatia mue... 33 3.3
BT025430_1(BT025430|pid:none) Bos taurus collagen, type VIII, al... 27 3.4
AP009493_2408(AP009493|pid:none) Streptomyces griseus subsp. gri... 30 3.5
AK087895_1(AK087895|pid:none) Mus musculus 2 days pregnant adult... 36 3.5
AY859311_2(AY859311|pid:none) Pseudomonas viridiflava strain ME2... 36 3.5
BA000030_6643(BA000030|pid:none) Streptomyces avermitilis MA-468... 36 3.5
AF170319_1(AF170319|pid:none) Xenopus laevis clone IM3/E3-60 col... 36 3.5
AK301206_1(AK301206|pid:none) Homo sapiens cDNA FLJ56740 complet... 36 3.5
AB464222_1(AB464222|pid:none) Synthetic construct DNA, clone: pF... 36 3.5
AP004800_4(AP004800|pid:none) Oryza sativa Japonica Group genomi... 36 3.5
AK028217_1(AK028217|pid:none) Mus musculus 10, 11 days embryo wh... 36 3.5
CU633899_323(CU633899|pid:none) Podospora anserina genomic DNA c... 36 3.5
AK301034_1(AK301034|pid:none) Homo sapiens cDNA FLJ60171 complet... 36 3.5
AP004458_6(AP004458|pid:none) Oryza sativa Japonica Group genomi... 36 3.5
CP000738_1061(CP000738|pid:none) Sinorhizobium medicae WSM419, c... 36 3.5
(P27048) RecName: Full=Small nuclear ribonucleoprotein-associate... 36 3.5
(A4QEZ2) RecName: Full=Translation initiation factor IF-2; &AP0... 36 3.5
(A0QIY2) RecName: Full=Translation initiation factor IF-2; &AY6... 36 3.5
CT027837_1(CT027837|pid:none) Zebrafish DNA sequence from clone ... 36 3.5
(Q4P2B6) RecName: Full=Protein transport protein SEC31; 36 3.5
(A1CRM1) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 36 3.5
AM420293_6465(AM420293|pid:none) Saccharopolyspora erythraea NRR... 36 3.5
AY205256_1(AY205256|pid:none) Danio rerio brahma protein-like pr... 36 3.5
M34081_1(M34081|pid:none) Human small nuclear ribonucleoprotein ... 36 3.5
Z98866_8(Z98866|pid:none) Caenorhabditis elegans YAC Y49E10, com... 36 3.5
AP009493_1935(AP009493|pid:none) Streptomyces griseus subsp. gri... 36 3.5
CT009572_1(CT009572|pid:none) Mouse DNA sequence from clone RP23... 36 3.5
CP000323_1374(CP000323|pid:none) Psychrobacter cryohalolentis K5... 36 3.5
AY261249_1(AY261249|pid:none) Echinometra sp. C isolate T-Btm113... 36 3.5
FN321432_1(FN321432|pid:none) Schistosoma japonicum isolate Anhu... 36 3.5
AE017222_138(AE017222|pid:none) Thermus thermophilus HB27 plasmi... 36 3.5
AK125874_1(AK125874|pid:none) Homo sapiens cDNA FLJ43886 fis, cl... 36 3.5
BC120485_1(BC120485|pid:none) Mus musculus keratin 2, mRNA (cDNA... 36 3.5
AY810961_1(AY810961|pid:none) Schistosoma japonicum SJCHGC01954 ... 36 3.5
CU633899_624(CU633899|pid:none) Podospora anserina genomic DNA c... 36 3.5
(P18832) RecName: Full=Cuticle collagen 7; Flags: Precursor; &T... 36 3.5
CP001618_3610(CP001618|pid:none) Beutenbergia cavernae DSM 12333... 36 3.5
BC169319_1(BC169319|pid:none) Synthetic construct Mus musculus c... 36 3.5
AP006618_4686(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 36 3.5
BC055537_1(BC055537|pid:none) Danio rerio SWI/SNF related, matri... 36 3.5
BC056532_1(BC056532|pid:none) Danio rerio splicing factor 3b, su... 33 3.5
AY099515_1(AY099515|pid:none) Danio rerio splicing factor 3b sub... 33 3.5
AC007396_22(AC007396|pid:none) Genomic sequence for Arabidopsis ... 35 3.5
AF412102_1(AF412102|pid:none) Arabidopsis thaliana At1g76010/T4O... 35 3.6
EU480833_1(EU480833|pid:none) Caenorhabditis remanei strain PB20... 33 3.7
EU480837_1(EU480837|pid:none) Caenorhabditis remanei strain PB21... 33 3.7
(A2AX52) RecName: Full=Collagen alpha-4(VI) chain; Flags: Precur... 33 4.0
AY380817_1(AY380817|pid:none) Danio rerio chihuahua (chi) mRNA, ... 31 4.1
BC161663_1(BC161663|pid:none) Danio rerio collagen, type I, alph... 31 4.2
EU120662_1(EU120662|pid:none) Mytilus californianus precollagen-... 31 4.3
M88593_1(M88593|pid:none) Gallus gallus alpha-1 type XI collagen... 33 4.3
AE014297_2306(AE014297|pid:none) Drosophila melanogaster chromos... 33 4.3
AE014297_2304(AE014297|pid:none) Drosophila melanogaster chromos... 33 4.3
X62332_1(X62332|pid:none) M.musculus mRNA for alpha-2 collagen t... 33 4.3
AY035849_1(AY035849|pid:none) Sus scrofa clone SL44-1 basic prol... 28 4.4
AE014296_901(AE014296|pid:none) Drosophila melanogaster chromoso... 30 4.5
AF448524_1(AF448524|pid:none) Mytilus galloprovincialis precolla... 35 4.5
BT058036_1(BT058036|pid:none) Drosophila melanogaster RE72304 fu... 35 4.5
AY095027_1(AY095027|pid:none) Drosophila melanogaster LD11664 fu... 35 4.5
CP000511_2511(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 35 4.6
CP000095_1520(CP000095|pid:none) Prochlorococcus marinus str. NA... 35 4.6
AF218621_1(AF218621|pid:none) Nephila clavipes flagelliform silk... 35 4.6
(Q3U2S4) RecName: Full=OTU domain-containing protein 5; ... 35 4.6
BC053208_1(BC053208|pid:none) Danio rerio annexin A11a, mRNA (cD... 35 4.6
AL671978_1(AL671978|pid:none) Mouse DNA sequence from clone RP23... 35 4.6
AE000513_444(AE000513|pid:none) Deinococcus radiodurans R1 chrom... 35 4.6
BC082718_1(BC082718|pid:none) Xenopus tropicalis hypothetical LO... 35 4.6
AL161644_9(AL161644|pid:none) Human DNA sequence from clone RP5-... 35 4.6
CP001157_3784(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 35 4.6
T19288(T19288) hypothetical protein C15A11.6 - Caenorhabditis el... 35 4.6
DQ183164_1(DQ183164|pid:none) Strongylocentrotus purpuratus Sp01... 35 4.6
(Q54WH2) RecName: Full=Formin-A; 35 4.6
CU638743_445(CU638743|pid:none) Podospora anserina genomic DNA c... 35 4.6
AY859340_2(AY859340|pid:none) Pseudomonas viridiflava strain SL2... 35 4.6
BA000040_3486(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 35 4.6
BT051334_1(BT051334|pid:none) Medicago truncatula clone MTYF1_F2... 35 4.6
CP000386_2391(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 35 4.6
AB082542_1(AB082542|pid:none) Dictyostelium discoideum forA mRNA... 35 4.6
AY859371_1(AY859371|pid:none) Pseudomonas viridiflava strain SP3... 35 4.6
(Q2YDU3) RecName: Full=OTU domain-containing protein 5; ... 35 4.6
EU685275_1(EU685275|pid:none) Drosophila virilis coiled-coil Y p... 35 4.6
AY859309_2(AY859309|pid:none) Pseudomonas viridiflava strain LU1... 35 4.6
AY859297_2(AY859297|pid:none) Pseudomonas viridiflava strain KY1... 35 4.6
AP004779_14(AP004779|pid:none) Oryza sativa Japonica Group genom... 35 4.6
(Q5TM61) RecName: Full=Serine/threonine-protein phosphatase 1 re... 35 4.6
CP000359_1738(CP000359|pid:none) Deinococcus geothermalis DSM 11... 35 4.6
(A6W7Z2) RecName: Full=Translation initiation factor IF-2; &CP0... 35 4.6
AL671978_2(AL671978|pid:none) Mouse DNA sequence from clone RP23... 35 4.6
AK302244_1(AK302244|pid:none) Homo sapiens cDNA FLJ60194 complet... 35 4.6
(A8E4M1) RecName: Full=Protein DERPC; &BC149171_1(BC149171|pid:... 35 4.6
CP000511_136(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1,... 35 4.6
AE016958_4086(AE016958|pid:none) Mycobacterium avium subsp. para... 35 4.6
CP000249_642(CP000249|pid:none) Frankia sp. CcI3, complete genome. 35 4.6
AP009152_1603(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, ... 35 4.6
AL662968_10(AL662968|pid:none) Oryza sativa genomic DNA, chromos... 35 4.6
(Q8FPA7) RecName: Full=Translation initiation factor IF-2; &BA0... 35 4.6
(A7NID1) RecName: Full=Translation initiation factor IF-2; &CP0... 35 4.6
T31611(T31611)hypothetical protein Y50E8A.g - Caenorhabditis ele... 35 4.6
BT003557_1(BT003557|pid:none) Drosophila melanogaster LP07855 fu... 33 4.6
CP000943_512(CP000943|pid:none) Methylobacterium sp. 4-46, compl... 31 4.7
EU480840_1(EU480840|pid:none) Caenorhabditis remanei strain PB24... 33 4.8
EU480834_1(EU480834|pid:none) Caenorhabditis remanei strain PB21... 33 4.8
AY812297_1(AY812297|pid:none) Schistosoma japonicum SJCHGC07001 ... 28 5.2
BC153847_1(BC153847|pid:none) Bos taurus collagen, type XVIII, a... 29 5.4
CP001349_4109(CP001349|pid:none) Methylobacterium nodulans ORS 2... 32 5.6
BT040088_1(BT040088|pid:none) Zea mays full-length cDNA clone ZM... 30 5.7
X56881_1(X56881|pid:none) E.muelleri Lieb. COLNF13 gene for non-... 30 5.8
(A8M746) RecName: Full=Translation initiation factor IF-2; &CP0... 35 6.0
BC002914_1(BC002914|pid:none) Homo sapiens WAS/WASL interacting ... 35 6.0
U58758_3(U58758|pid:none) Caenorhabditis elegans cosmid ZK1127, ... 35 6.0
AM746676_8910(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 35 6.0
(Q9UBV8) RecName: Full=Peflin; AltName: Full=PEF protein with a ... 35 6.0
OOOCG(S00610)rhodopsin - giant octopus 35 6.0
DQ648528_1(DQ648528|pid:none) Bombyx mori spliceosomal protein o... 35 6.0
AF332547_16(AF332547|pid:none) Pseudomonas aeruginosa flagellar ... 35 6.0
(Q5TF21) RecName: Full=Uncharacterized protein C6orf174; Flags: ... 35 6.0
AM502248_307(AM502248|pid:none) Leishmania infantum chromosome 30. 35 6.0
CP000251_1676(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 35 6.0
AY261221_1(AY261221|pid:none) Echinometra oblonga isolate O-No10... 35 6.0
AK031346_1(AK031346|pid:none) Mus musculus 13 days embryo male t... 35 6.0
U58758_7(U58758|pid:none) Caenorhabditis elegans cosmid ZK1127, ... 35 6.0
>EF469736_1(EF469736|pid:none) Synthetic construct proline rich
protein gene, complete cds.
Length = 250
Score = 53.9 bits (128), Expect = 1e-05
Identities = 44/134 (32%), Positives = 53/134 (39%), Gaps = 8/134 (5%)
Frame = -2
Query: 1011 PLGPLGGWWERGGLFKGKARKARGTGDSPKGGPHSGLXDQIPLSQPGGGLMEPERVGGQS 832
P GP R G +G R G P G P G Q P QPG P + G Q
Sbjct: 45 PKGP------RPGSTQGPPRVPNQQGPPPPGPPPQGSSQQRP-PQPGNQQGPPPQGGPQG 97
Query: 831 PDPRPGARKXAPC--------PWPGQRGGPPSGGNPLGALETPCARRGETLGPNGRDNQG 676
P PRPG ++ P P PG + GPP G P + +G GP+ NQ
Sbjct: 98 P-PRPGNQQVPPPQEGSQQRPPQPGNQQGPPPQGPPRPGNQQGPPPQGGPQGPSRPGNQQ 156
Query: 675 YPRTGGGEGMEPPR 634
P GG PP+
Sbjct: 157 GPPPQGGPQQRPPQ 170
Score = 49.7 bits (117), Expect = 2e-04
Identities = 36/101 (35%), Positives = 41/101 (40%)
Frame = -2
Query: 936 GDSPKGGPHSGLXDQIPLSQPGGGLMEPERVGGQSPDPRPGARKXAPCPWPGQRGGPPSG 757
G P+G P G P P GG P R G Q P G + P P PG + GPP
Sbjct: 125 GPPPQGPPRPGNQQGPP---PQGGPQGPSRPGNQQGPPPQGGPQQRP-PQPGNQQGPPPQ 180
Query: 756 GNPLGALETPCARRGETLGPNGRDNQGYPRTGGGEGMEPPR 634
G P G GP + QG P GG +G PPR
Sbjct: 181 GGPQG-------------GPQPGNQQGPPPQGGPQG--PPR 206
Score = 37.7 bits (86), Expect = 0.92
Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 7/112 (6%)
Frame = -2
Query: 966 KGKARKARGTGDSPKGGPHSGLXDQIPLSQPGGGLMEPERVGGQSPDPRPGARKXAPC-- 793
+G +R G P+GGP Q P QPG P + GG P+PG ++ P
Sbjct: 147 QGPSRPGNQQGPPPQGGPQ-----QRP-PQPGNQQGPPPQ-GGPQGGPQPGNQQGPPPQG 199
Query: 792 -----PWPGQRGGPPSGGNPLGALETPCARRGETLGPNGRDNQGYPRTGGGE 652
P PG + GPP G P + P P ++QG P+ G E
Sbjct: 200 GPQGPPRPGNQQGPPPQGGP----QRP---------PQPGNHQGPPQYGNNE 238
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,508,499,057
Number of extensions: 32600376
Number of successful extensions: 172339
Number of sequences better than 10.0: 612
Number of HSP's gapped: 164018
Number of HSP's successfully gapped: 1090
Length of query: 435
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 303
Effective length of database: 623,955,076
Effective search space: 189058388028
Effective search space used: 189058388028
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
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