| Contig-U12643-1 |
| Contig ID |
Contig-U12643-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
787 |
| Chromosome number (1..6, M) |
4 |
| Chromosome length |
5430582 |
| Start point |
973052 |
| End point |
972264 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
4 |
| Number of EST |
4 |
| Link to clone list |
U12643 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.12. 2 |
| Homology vs DNA |
Query= Contig-U12643-1 (Contig-U12643-1Q) /CSM_Contig/Contig-U12643-1Q.Seq.d
(787 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ348403) Dictyostelium discoideum cDNA clone:dda33j03, 3' ... 1324 0.0 1
(U83086) Dictyostelium discoideum LimA (limA) mRNA, partial ... 1245 0.0 2
(BJ407895) Dictyostelium discoideum cDNA clone:dds44b03, 3' ... 1203 0.0 1
(C93228) Dictyostelium discoideum slug cDNA, clone SSM849. 999 0.0 1
(C92805) Dictyostelium discoideum slug cDNA, clone SSF366. 846 0.0 1
(ET069774) QM0AAA3AF11RM1 CCL1 Citrus clementina genomic clo... 52 0.032 1
(EL503105) F06_PFLAB1-LARGE-PLATE13B.AB1 Blood stage Plasmod... 40 0.077 2
(CU856537) S.lycopersicum DNA sequence from clone SL_FOS-82H... 50 0.13 1
(ET101160) QM0AAB18CD04RM1 CCER1 Citrus clementina genomic c... 50 0.13 1
(AC140667) Canis familiaris clone RP81-292C20, WORKING DRAFT... 40 0.45 5
(AC146080) Pan troglodytes BAC clone RP43-51K11 from chromos... 48 0.50 1
(CQ696573) Sequence 41499 from Patent WO02070737. 48 0.50 1
(BC062673) Homo sapiens kinesin family member 13A, mRNA (cDN... 48 0.50 1
(AL023807) Human DNA sequence from clone RP3-525L6 on chromo... 48 0.50 1
(AC132679) Rattus norvegicus clone CH230-74H6, *** SEQUENCIN... 48 0.50 1
(AC131458) Rattus norvegicus clone CH230-345A7, WORKING DRAF... 48 0.50 1
(AC122644) Rattus norvegicus clone CH230-201O6, *** SEQUENCI... 48 0.50 1
(CU607015) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.50 1
(AC093947) Rattus norvegicus clone CH230-191J18, WORKING DRA... 48 0.50 1
(ET205260) MUGQ_CH252P402K11Sp6_CP766_038 CHORI-252 Vervet M... 48 0.50 1
(EJ548253) 1092959419691 Global-Ocean-Sampling_GS-29-01-01-1... 48 0.50 1
(EJ532733) 1092955239969 Global-Ocean-Sampling_GS-29-01-01-1... 48 0.50 1
(DH732896) Rattus norvegicus DNA, BAC clone: RNB1-304F14, 5'... 48 0.50 1
(BZ172535) CH230-268I14.TV CHORI-230 Segment 2 Rattus norveg... 48 0.50 1
(DB530647) Homo sapiens hippocampus cDNA, RIKEN full-length ... 48 0.50 1
(CX752156) AGENCOURT_41369681 NIH_MGC_279 Homo sapiens cDNA ... 48 0.50 1
(AI741491) wg11d03.x1 Soares_NSF_F8_9W_OT_PA_P_S1 Homo sapie... 48 0.50 1
(AI080622) ox54b01.x1 Soares_total_fetus_Nb2HF8_9w Homo sapi... 48 0.50 1
(CU856605) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 32 0.77 8
(AM285304) Spiroplasma citri GII3-3X chromosome, contig Cont... 40 0.82 11
(AC190842) Zea mays chromosome 3 clone CH201-192J22; ZMMBBc0... 40 0.96 2
(AC203950) Zea mays chromosome 2 clone CH201-137F7; ZMMBBc01... 40 0.96 2
(AC176820) Strongylocentrotus purpuratus clone R3-3111E16, W... 36 1.0 2
(CU469168) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 1.0 2
(CU657945) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 1.0 2
(AC178904) Strongylocentrotus purpuratus clone R3-1112F3, WO... 36 1.1 2
(AC178905) Strongylocentrotus purpuratus clone R3-1112F5, WO... 36 1.1 2
(AC179744) Strongylocentrotus purpuratus clone R3-1018G23, W... 36 1.1 2
(CT573270) RP43-049F09, complete sequence. 36 1.1 5
(AL135924) Human DNA sequence from clone RP11-63P12 on chrom... 40 1.2 4
(AC220283) Bos taurus clone CH240-368G7, WORKING DRAFT SEQUE... 32 1.3 8
(AY521254) Aleuroplatus gelatinosus cytochrome b (CYTB) gene... 36 1.3 2
(BH463943) BOHEK15TF BOHE Brassica oleracea genomic clone BO... 32 1.5 3
(AC180966) Strongylocentrotus purpuratus clone R3-3058P16, W... 40 1.8 5
(CU914297) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.0 1
(CU633715) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.0 1
(AC163834) Bos taurus clone CH240-143F12, *** SEQUENCING IN ... 46 2.0 1
(AM660586) Entamoeba moshkovskii FIC GSS, clone mosh100e12.p1k. 46 2.0 1
(DX547508) GH_MBb0034H01f GH_MBb Gossypium hirsutum genomic ... 46 2.0 1
(CX834650) ACAC-aaa65a09.g1 Hydra EST UCI 7 Hydra magnipapil... 46 2.0 1
(CB282619) BT0598 Blomia tropicalis cDNA library Blomia trop... 46 2.0 1
(BX571862) Photorhabdus luminescens subsp. laumondii TTO1 co... 38 2.4 4
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 32 2.8 10
(AC109074) Rattus norvegicus clone CH230-130J3, *** SEQUENCI... 42 2.9 4
(CR932110) Paramecium tetraurelia centrin-related protein gene. 38 3.0 4
(AL445650) Human DNA sequence from clone RP11-152K20 on chro... 34 3.8 2
(AF198250) Dictyostelium discoideum lim2 protein (limB) mRNA... 36 4.0 3
(DR758501) USDA-FP_119200-030 adult black-winged sharpshoote... 36 4.3 2
(DN473901) USDA-FP_147891 Adult sharpshooter leafhopper Onco... 36 4.3 2
(EK240691) 1095460221995 Global-Ocean-Sampling_GS-31-01-01-1... 40 5.1 2
(BH164530) ENTTL60TF Entamoeba histolytica Sheared DNA Entam... 36 5.2 2
(AP007815) Lotus japonicus genomic DNA, chromosome 5, clone:... 36 5.7 3
(AC168674) Strongylocentrotus purpuratus clone R3-3015E16, W... 44 5.8 2
(AZ682291) ENTFN53TR Entamoeba histolytica Sheared DNA Entam... 36 5.8 2
(DN790451) 90937801 Sea Urchin primary mesenchyme cell cDNA ... 34 6.2 2
(AC093910) Homo sapiens BAC clone RP11-762H11 from 2, comple... 32 6.3 6
(AC202371) Medicago truncatula clone mth2-80f16, WORKING DRA... 42 7.1 4
(BX660077) Arabidopsis thaliana T-DNA flanking sequence GK-6... 38 7.7 2
(CR385074) Zebrafish DNA sequence from clone CH211-258K6 in ... 44 7.9 1
(AY967119) Synthetic construct isolate FTT1245 unknown prote... 44 7.9 1
(AY774250) Synthetic construct Francisella tularensis clone ... 44 7.9 1
(AC166064) Mus musculus BAC clone RP23-52K8 from chromosome ... 44 7.9 1
(AC164646) Mus musculus BAC clone RP24-262I1 from chromosome... 44 7.9 1
(AC161383) Mus musculus BAC clone RP23-68C13 from chromosome... 44 7.9 1
(AC131187) Mus musculus BAC clone RP24-250M7 from 13, comple... 44 7.9 1
(AC130536) Mus musculus BAC clone RP23-369M17 from 13, compl... 44 7.9 1
(AC123844) Mus musculus BAC clone RP23-416P14 from chromosom... 44 7.9 1
(AC118194) Mus musculus chromosome 3, clone RP23-464I9, comp... 44 7.9 1
(AC084826) Genomic sequence for Mus musculus, clone RP23-146... 44 7.9 1
(CU633895) Podospora anserina genomic DNA chromosome 4, supe... 44 7.9 1
(CS789467) Sequence 723 from Patent WO2005031001. 44 7.9 1
(AL354923) Human DNA sequence from clone RP11-192E23 on chro... 44 7.9 1
(AC150403) Branchiostoma floridae clone CH302-38A13, WORKING... 44 7.9 1
(AC122594) Rattus norvegicus clone CH230-42F14, WORKING DRAF... 44 7.9 1
(AC101489) Mus musculus clone RP23-188N12, LOW-PASS SEQUENCE... 44 7.9 1
(AC099278) Rattus norvegicus clone CH230-111G18, *** SEQUENC... 44 7.9 1
(AC096327) Rattus norvegicus clone CH230-72M16, WORKING DRAF... 44 7.9 1
(CU928354) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 7.9 1
(CU928073) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 7.9 1
(CU855714) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 7.9 1
(CR936243) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 7.9 1
(CR854898) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 7.9 1
(CR751237) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 7.9 1
(AC223244) Bos taurus clone CH240-425I10, WORKING DRAFT SEQU... 44 7.9 1
(AC179875) Strongylocentrotus purpuratus clone R3-1006O05, W... 44 7.9 1
(AZ893258) RPCI-24-172D22.TV RPCI-24 Mus musculus genomic cl... 44 7.9 1
(AZ681011) ENTHP51TR Entamoeba histolytica Sheared DNA Entam... 44 7.9 1
(AL439158) T3 end of clone BD0AA002G12 of library BD0AA from... 44 7.9 1
(DY226476) ID0AAI8YI07RM1 ID0AEE Acyrthosiphon pisum cDNA cl... 44 7.9 1
(BG220946) RST40745 Athersys RAGE Library Homo sapiens cDNA,... 44 7.9 1
>(BJ348403) Dictyostelium discoideum cDNA clone:dda33j03, 3' end,
single read.
Length = 760
Score = 1324 bits (668), Expect = 0.0
Identities = 671/672 (99%)
Strand = Plus / Minus
Query: 1 aaagaccaaaagaaaaagtatacacacaaacaattacaaccaattgtttcatcaggtaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 aaagaccaaaagaaaaagtatacacacaaacaattacaaccaattgtttcatcaggtaaa 701
Query: 61 aattgtaaaagatgtaaacttgaaatatttggtaatacattaataaatcatttacaagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 aattgtaaaagatgtaaacttgaaatatttggtaatacattaataaatcatttacaagag 641
Query: 121 acctatcatccagaatgtttcaaatgttcaaattgtttctcatcaatagttgatccatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 acctatcatccagaatgtttcaaatgttcaaattgtttctcatcaatagttgatccatat 581
Query: 181 ttcactgaaccatcaacaaataaaatcttttgtgcaaaatgtcaaatcgttttaaatgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ttcactgaaccatcaacaaataaaatcttttgtgcaaaatgtcaaatcgttttaaatgat 521
Query: 241 ttagcaaaaccaaaaagagattcattaggtttctgttgttcatgttataaatttttaact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ttagcaaaaccaaaaagagattcattaggtttctgttgttcatgttataaatttttaact 461
Query: 301 gaagaagatgatattattgtaattgataaagagaaatatcataataaatgttttaaatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gaagaagatgatattattgtaattgataaagagaaatatcataataaatgttttaaatgt 401
Query: 361 tcatcttgtaaggaagttattagaggaaataattttagtagagaacaaatgacatcaact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tcatcttgtaaggaagttattagaggaaataattttagtagagaacaaatgacatcaact 341
Query: 421 tcaagtaactattgttgtaatacttgtttacacagtggtagagttgataaatgtgcttat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tcaagtaactattgttgtaatacttgtttacacagtggtagagttgataaatgtgcttat 281
Query: 481 tgtcatggtgtaattttgggtgtatcaatgttggcaatgggtcaaaactatcatccaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tgtcatggtgtaattttgggtgtatcaatgttggcaatgggtcaaaactatcatccaaaa 221
Query: 541 tgtttcaaatgttcaacttgtcatgttgtaattagacacaacacaccttttacaattaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 tgtttcaaatgttcaacttgtcatgttgtaattagacacaacacaccttttacaattaat 161
Query: 601 aaaaatcaaactccaacctgtcaaaattgtattaacacttcaagtgttggtgttgcttca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 aaaaatcaaactccaacctgtcaaaattgtattaacacttcaagtgttggtgttgcttca 101
Query: 661 agattaattact 672
|||| |||||||
Sbjct: 100 agataaattact 89
Score = 52.0 bits (26), Expect = 0.032
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 123 ctatcatccagaatgtttcaaatgttcaaattgt 156
|||||||||| |||||||||||||||||| ||||
Sbjct: 233 ctatcatccaaaatgtttcaaatgttcaacttgt 200
Score = 52.0 bits (26), Expect = 0.032
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 528 ctatcatccaaaatgtttcaaatgttcaacttgt 561
|||||||||| |||||||||||||||||| ||||
Sbjct: 638 ctatcatccagaatgtttcaaatgttcaaattgt 605
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 964,177,168
Number of extensions: 65638141
Number of successful extensions: 5450177
Number of sequences better than 10.0: 112
Length of query: 787
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 763
Effective length of database: 97,308,875,965
Effective search space: 74246672361295
Effective search space used: 74246672361295
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7. 4 |
| Homology vs Protein |
Query= Contig-U12643-1 (Contig-U12643-1Q) /CSM_Contig/Contig-U12643-1Q.Seq.d
(787 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U83086_1(U83086|pid:none) Dictyostelium discoideum LimA (limA) m... 454 e-126
(Q54QR1) RecName: Full=LIM domain-containing protein A; 454 e-126
(Q86I44) RecName: Full=LIM domain-containing protein F; &AC1163... 219 1e-55
BT079181_1(BT079181|pid:none) Esox lucius clone eluc-evq-511-060... 90 9e-17
BC072725_1(BC072725|pid:none) Danio rerio four and a half LIM do... 88 4e-16
AB122059_1(AB122059|pid:none) Anguilla japonica eFHL5 mRNA for f... 87 5e-16
BT056486_1(BT056486|pid:none) Salmo salar clone ssal-rgb2-624-31... 87 8e-16
BT049822_1(BT049822|pid:none) Salmo salar clone ssal-rgb2-509-14... 87 8e-16
BC142519_1(BC142519|pid:none) Bos taurus actin binding LIM prote... 86 1e-15
BC129372_1(BC129372|pid:none) Danio rerio zgc:158673, mRNA (cDNA... 86 2e-15
AK173040_1(AK173040|pid:none) Mus musculus mRNA for mKIAA0843 pr... 86 2e-15
AM392844_1(AM392844|pid:none) Synthetic construct Mus musculus c... 86 2e-15
BC171566_1(BC171566|pid:none) Danio rerio cDNA clone MGC:198293 ... 86 2e-15
CR457461_4(CR457461|pid:none) Zebrafish DNA sequence from clone ... 86 2e-15
AM392963_1(AM392963|pid:none) Synthetic construct Homo sapiens c... 84 5e-15
DQ413174_1(DQ413174|pid:none) Homo sapiens actin-binding LIM pro... 84 7e-15
AM392595_1(AM392595|pid:none) Synthetic construct Homo sapiens c... 84 7e-15
AM393563_1(AM393563|pid:none) Synthetic construct Homo sapiens c... 84 7e-15
(O94929) RecName: Full=Actin-binding LIM protein 3; AltName: Ful... 84 7e-15
CR860826_1(CR860826|pid:none) Pongo abelii mRNA; cDNA DKFZp469A2... 84 7e-15
AM393559_1(AM393559|pid:none) Synthetic construct Homo sapiens c... 84 7e-15
AM393554_1(AM393554|pid:none) Synthetic construct Homo sapiens c... 84 7e-15
AM393116_1(AM393116|pid:none) Synthetic construct Homo sapiens c... 84 7e-15
AM393820_1(AM393820|pid:none) Synthetic construct Homo sapiens c... 84 7e-15
AM393099_1(AM393099|pid:none) Synthetic construct Homo sapiens c... 84 7e-15
AM393722_1(AM393722|pid:none) Synthetic construct Homo sapiens c... 84 7e-15
AM393401_1(AM393401|pid:none) Synthetic construct Homo sapiens c... 84 7e-15
AM392998_1(AM392998|pid:none) Synthetic construct Homo sapiens c... 84 7e-15
AM393524_1(AM393524|pid:none) Synthetic construct Homo sapiens c... 83 9e-15
BT074680_1(BT074680|pid:none) Osmerus mordax clone omor-rgc-503-... 83 1e-14
BC077901_1(BC077901|pid:none) Xenopus laevis MGC80746 protein, m... 82 2e-14
AM393284_1(AM393284|pid:none) Synthetic construct Homo sapiens c... 82 2e-14
AM393655_1(AM393655|pid:none) Synthetic construct Homo sapiens c... 82 2e-14
BT056943_1(BT056943|pid:none) Salmo salar clone ssal-rgb2-609-36... 81 3e-14
BC078615_1(BC078615|pid:none) Xenopus laevis MGC85575 protein, m... 80 1e-13
AM392930_1(AM392930|pid:none) Synthetic construct Homo sapiens c... 80 1e-13
BC159222_1(BC159222|pid:none) Danio rerio four and a half LIM do... 79 1e-13
AJ275967_2(AJ275967|pid:none) Sus scrofa fhl1C gene for four and... 79 2e-13
AJ275967_1(AJ275967|pid:none) Sus scrofa fhl1C gene for four and... 79 2e-13
(Q9Y630) RecName: Full=Four and a half LIM domains protein 1; ... 76 1e-12
AF316038_1(AF316038|pid:none) Mus musculus actin-binding double ... 76 1e-12
AK122196_1(AK122196|pid:none) Mus musculus mRNA for mKIAA0059 pr... 76 1e-12
AL078638_8(AL078638|pid:none) Human DNA sequence from clone RP11... 76 1e-12
AK301642_1(AK301642|pid:none) Homo sapiens cDNA FLJ55259 complet... 76 1e-12
AL078638_6(AL078638|pid:none) Human DNA sequence from clone RP11... 76 1e-12
AK122708_1(AK122708|pid:none) Homo sapiens cDNA FLJ16189 fis, cl... 76 1e-12
AK171860_1(AK171860|pid:none) Mus musculus activated spleen cDNA... 76 1e-12
(P97447) RecName: Full=Four and a half LIM domains protein 1; ... 76 1e-12
AL671998_1(AL671998|pid:none) Mouse DNA sequence from clone RP23... 76 1e-12
AL671998_5(AL671998|pid:none) Mouse DNA sequence from clone RP23... 76 1e-12
AL671998_6(AL671998|pid:none) Mouse DNA sequence from clone RP23... 76 1e-12
BC061782_1(BC061782|pid:none) Rattus norvegicus four and a half ... 76 1e-12
AL671998_2(AL671998|pid:none) Mouse DNA sequence from clone RP23... 76 1e-12
CR857378_1(CR857378|pid:none) Pongo abelii mRNA; cDNA DKFZp468P2... 75 2e-12
G02741(JC4893;G02741)skeletal muscle LIM-protein SLIM1 - human 75 2e-12
AF005654_1(AF005654|pid:none) Homo sapiens actin-binding double-... 75 3e-12
CR858106_1(CR858106|pid:none) Pongo abelii mRNA; cDNA DKFZp468F1... 75 3e-12
AB462929_1(AB462929|pid:none) Synthetic construct DNA, clone: pF... 75 3e-12
D31883_1(D31883|pid:none) Homo sapiens KIAA0059 mRNA, partial cds. 75 3e-12
AL133384_7(AL133384|pid:none) Human DNA sequence from clone RP11... 75 3e-12
AK122891_1(AK122891|pid:none) Homo sapiens cDNA FLJ16546 fis, cl... 75 3e-12
AL133384_8(AL133384|pid:none) Human DNA sequence from clone RP11... 75 3e-12
AK304680_1(AK304680|pid:none) Homo sapiens cDNA FLJ55274 complet... 74 4e-12
AF110763_1(AF110763|pid:none) Homo sapiens skeletal muscle LIM-p... 74 7e-12
BC073254_1(BC073254|pid:none) Xenopus laevis MGC80605 protein, m... 74 7e-12
CR853286_10(CR853286|pid:none) Zebrafish DNA sequence from clone... 74 7e-12
BC061449_1(BC061449|pid:none) Danio rerio zgc:63514, mRNA (cDNA ... 74 7e-12
AJ132409_1(AJ132409|pid:none) Mus musculus mRNA for LIM domains ... 73 9e-12
BC091932_1(BC091932|pid:none) Danio rerio zgc:112954, mRNA (cDNA... 73 1e-11
BC082347_1(BC082347|pid:none) Xenopus tropicalis fhl3 protein, m... 73 1e-11
BT059646_1(BT059646|pid:none) Salmo salar clone ssal-rgf-502-137... 73 1e-11
(A6NIX2) RecName: Full=Wilms tumor protein 1-interacting protein... 72 2e-11
BC061148_1(BC061148|pid:none) Mus musculus four and a half LIM d... 72 2e-11
BC160027_1(BC160027|pid:none) Synthetic construct Homo sapiens c... 72 2e-11
AE014297_1029(AE014297|pid:none) Drosophila melanogaster chromos... 72 2e-11
AE014297_1030(AE014297|pid:none) Drosophila melanogaster chromos... 72 2e-11
AE014297_1031(AE014297|pid:none) Drosophila melanogaster chromos... 72 2e-11
AC114263_25(AC114263|pid:none) Dictyostelium discoideum chromoso... 72 3e-11
C88346(C88346)protein F42G4.3a [imported] - Caenorhabditis elegans 72 3e-11
T22111(T22111) hypothetical protein F42G4.3a - Caenorhabditis el... 72 3e-11
CR858833_1(CR858833|pid:none) Pongo abelii mRNA; cDNA DKFZp468O1... 72 3e-11
AK004806_1(AK004806|pid:none) Mus musculus adult male lung cDNA,... 71 3e-11
AK047198_1(AK047198|pid:none) Mus musculus 10 days neonate cereb... 71 3e-11
(Q9QXD8) RecName: Full=LIM domain-containing protein 1; 71 3e-11
Z81068_16(Z81068|pid:none) Caenorhabditis elegans Cosmid F25H5, ... 71 3e-11
BC056449_1(BC056449|pid:none) Mus musculus LIM domains containin... 71 3e-11
(A5H447) RecName: Full=Zyxin; &EF051627_1(EF051627|pid:none) 71 3e-11
(Q91XC0) RecName: Full=Protein ajuba; &BC011035_1(BC011035|pid:... 71 3e-11
Z81068_15(Z81068|pid:none) Caenorhabditis elegans Cosmid F25H5, ... 71 3e-11
U79776_1(U79776|pid:none) Mus musculus ajuba (Ajuba) mRNA, compl... 71 3e-11
AF053486_1(AF053486|pid:none) Mus musculus LIM-protein FHL4 (Fhl... 71 5e-11
(Q96IF1) RecName: Full=Protein ajuba; &AX429447_1(AX429447|pid:... 71 5e-11
AK005848_1(AK005848|pid:none) Mus musculus adult male testis cDN... 71 5e-11
AX405733_1(AX405733|pid:none) Sequence 148 from Patent WO0222660. 70 6e-11
(Q9UGP4) RecName: Full=LIM domain-containing protein 1; &AJ1324... 70 6e-11
BT044387_1(BT044387|pid:none) Drosophila melanogaster FI08061 fu... 70 8e-11
BC121276_1(BC121276|pid:none) Xenopus tropicalis filamin-binding... 70 1e-10
BT015299_1(BT015299|pid:none) Drosophila melanogaster AT25814 fu... 70 1e-10
EU675626_1(EU675626|pid:none) Hirudo medicinalis paxillin mRNA, ... 70 1e-10
(A9LS46) RecName: Full=Wilms tumor protein 1-interacting protein... 69 1e-10
BC160748_1(BC160748|pid:none) Xenopus laevis hypothetical protei... 69 1e-10
AE014134_3473(AE014134|pid:none) Drosophila melanogaster chromos... 69 2e-10
JG0164(JG0164)LIM protein, FHL4 - mouse 69 2e-10
(Q55GV9) RecName: Full=Calponin homology and LIM domain-containi... 69 2e-10
AF231987_1(AF231987|pid:none) Dictyostelium discoideum LIM domai... 69 2e-10
BC171270_1(BC171270|pid:none) Xenopus tropicalis LIM domains con... 69 2e-10
CR760537_1(CR760537|pid:none) Xenopus tropicalis finished cDNA, ... 69 2e-10
AF198250_1(AF198250|pid:none) Dictyostelium discoideum lim2 prot... 68 3e-10
FN317368_1(FN317368|pid:none) Schistosoma japonicum isolate Anhu... 68 3e-10
AL133384_4(AL133384|pid:none) Human DNA sequence from clone RP11... 68 3e-10
FN357384_18(FN357384|pid:none) Schistosoma mansoni genome sequen... 68 3e-10
(Q2YDK0) RecName: Full=Four and a half LIM domains protein 5; ... 68 3e-10
BT011157_1(BT011157|pid:none) Drosophila melanogaster AT24473 fu... 68 3e-10
BX950216_4(BX950216|pid:none) Zebrafish DNA sequence from clone ... 68 3e-10
AE013599_3992(AE013599|pid:none) Drosophila melanogaster chromos... 68 4e-10
BC067214_1(BC067214|pid:none) Homo sapiens actin binding LIM pro... 68 4e-10
DQ413176_1(DQ413176|pid:none) Homo sapiens actin-binding LIM pro... 68 4e-10
DQ913740_1(DQ913740|pid:none) Xenopus laevis LIM domains-contain... 68 4e-10
AB058711_1(AB058711|pid:none) Homo sapiens mRNA for KIAA1808 pro... 68 4e-10
EU239660_1(EU239660|pid:none) Caenorhabditis elegans pxl-1 isofo... 68 4e-10
BC122567_1(BC122567|pid:none) Homo sapiens actin binding LIM pro... 68 4e-10
BC160566_1(BC160566|pid:none) Xenopus tropicalis four and a half... 68 4e-10
BT046142_1(BT046142|pid:none) Drosophila melanogaster FI08059 fu... 68 4e-10
DQ413177_1(DQ413177|pid:none) Homo sapiens actin-binding LIM pro... 68 4e-10
AY815014_1(AY815014|pid:none) Schistosoma japonicum SJCHGC06016 ... 68 4e-10
(Q09476) RecName: Full=Paxillin homolog 1; &EU239658_1(EU239658... 68 4e-10
BC045922_1(BC045922|pid:none) Danio rerio zgc:56116, mRNA (cDNA ... 68 4e-10
AE014298_2059(AE014298|pid:none) Drosophila melanogaster chromos... 67 5e-10
AY892978_1(AY892978|pid:none) Synthetic construct Homo sapiens c... 67 5e-10
AY113460_1(AY113460|pid:none) Drosophila melanogaster RE37250 fu... 67 7e-10
BC155936_1(BC155936|pid:none) Xenopus laevis hypothetical protei... 67 7e-10
AE014296_2988(AE014296|pid:none) Drosophila melanogaster chromos... 67 7e-10
AK298340_1(AK298340|pid:none) Homo sapiens cDNA FLJ59124 complet... 67 7e-10
AE014296_2989(AE014296|pid:none) Drosophila melanogaster chromos... 67 7e-10
AE014296_2981(AE014296|pid:none) Drosophila melanogaster chromos... 67 7e-10
BC160411_1(BC160411|pid:none) Xenopus tropicalis hypothetical pr... 67 9e-10
(Q6AXT1) RecName: Full=Four and a half LIM domains protein 5; ... 67 9e-10
FN317463_1(FN317463|pid:none) Schistosoma japonicum isolate Anhu... 67 9e-10
AK082707_1(AK082707|pid:none) Mus musculus 0 day neonate cerebel... 66 1e-09
AJ748603_1(AJ748603|pid:none) Mus musculus mRNA for actin bindin... 66 1e-09
DQ225183_1(DQ225183|pid:none) Sparus aurata four and a half LIM ... 66 1e-09
DQ413175_1(DQ413175|pid:none) Mus musculus actin-binding LIM pro... 66 1e-09
(A8DZE6) RecName: Full=Wilms tumor protein 1-interacting protein... 66 1e-09
AK154494_1(AK154494|pid:none) Mus musculus NOD-derived CD11c +ve... 66 1e-09
BC083393_1(BC083393|pid:none) Danio rerio zgc:103466, mRNA (cDNA... 65 2e-09
AK304760_1(AK304760|pid:none) Homo sapiens cDNA FLJ61577 complet... 65 2e-09
CP001325_73(CP001325|pid:none) Micromonas sp. RCC299 chromosome ... 65 2e-09
BC161996_1(BC161996|pid:none) Rattus norvegicus similar to thyro... 65 2e-09
BC004249_1(BC004249|pid:none) Homo sapiens thyroid hormone recep... 65 2e-09
AY206012_1(AY206012|pid:none) Mus musculus PDZ-LIM protein cyphe... 65 2e-09
BC079524_1(BC079524|pid:none) Danio rerio zgc:92375, mRNA (cDNA ... 65 2e-09
AY206013_1(AY206013|pid:none) Mus musculus PDZ-LIM protein cyphe... 65 2e-09
AF114378_1(AF114378|pid:none) Mus musculus PDZ-LIM protein cyphe... 65 2e-09
(Q9R0Z1) RecName: Full=LIM domain-binding protein 3; AltName: Fu... 65 2e-09
BT048479_1(BT048479|pid:none) Salmo salar clone ssal-evd-567-121... 65 2e-09
AK172980_1(AK172980|pid:none) Mus musculus mRNA for mKIAA0613 pr... 65 2e-09
AF228058_1(AF228058|pid:none) Mus musculus oracle 2 protein mRNA... 65 2e-09
AE014298_2577(AE014298|pid:none) Drosophila melanogaster chromos... 65 2e-09
(P49024) RecName: Full=Paxillin; &B55933(B55933) &L30099_1(L300... 65 2e-09
DQ138704_1(DQ138704|pid:none) Drosophila melanogaster strain Ral... 65 3e-09
AK304260_1(AK304260|pid:none) Homo sapiens cDNA FLJ55509 complet... 65 3e-09
DQ118096_1(DQ118096|pid:none) Danio rerio four and half LIM doma... 65 3e-09
BC002680_1(BC002680|pid:none) Homo sapiens thyroid hormone recep... 65 3e-09
AK088939_1(AK088939|pid:none) Mus musculus 2 days neonate thymus... 65 3e-09
AJ001902_1(AJ001902|pid:none) Homo sapiens mRNA for TRIP6 (thyro... 65 3e-09
(Q55DS4) RecName: Full=LIM domain-containing protein G; 65 3e-09
AF317890_1(AF317890|pid:none) Xenopus laevis paxillin mRNA, comp... 65 3e-09
JC7686(JC7686)activator of cAMP-responsive element modulator, te... 65 3e-09
AK082932_1(AK082932|pid:none) Mus musculus 7 days embryo whole b... 65 3e-09
AF312032_5(AF312032|pid:none) Homo sapiens acetylcholinesterase ... 65 3e-09
AF000974_1(AF000974|pid:none) Human zyxin related protein ZRP-1 ... 65 3e-09
(Q4R7A4) RecName: Full=Four and a half LIM domains protein 5; ... 65 3e-09
AK302411_1(AK302411|pid:none) Homo sapiens cDNA FLJ55165 complet... 65 3e-09
CR936426_1(CR936426|pid:none) Zebrafish DNA sequence from clone ... 65 3e-09
BC167913_1(BC167913|pid:none) Xenopus tropicalis cDNA clone MGC:... 65 3e-09
BC076551_1(BC076551|pid:none) Danio rerio PDZ and LIM domain 5, ... 65 3e-09
BX648777_1(BX648777|pid:none) Homo sapiens mRNA; cDNA DKFZp686N2... 65 3e-09
AB027499_1(AB027499|pid:none) Xenopus laevis mRNA for paxillin, ... 65 3e-09
JC2324(JC2324)LIM protein - human 65 3e-09
BT078286_1(BT078286|pid:none) Lepeophtheirus salmonis Pacific fo... 65 3e-09
(Q99JW4) RecName: Full=LIM and senescent cell antigen-like-conta... 65 3e-09
BC021468_1(BC021468|pid:none) Mus musculus four and a half LIM d... 64 4e-09
BC155652_1(BC155652|pid:none) Danio rerio zgc:172321, mRNA (cDNA... 64 4e-09
(O70433) RecName: Full=Four and a half LIM domains protein 2; ... 64 4e-09
BX957309_6(BX957309|pid:none) Zebrafish DNA sequence from clone ... 64 4e-09
FJ640985_1(FJ640985|pid:none) Rattus norvegicus LIM and senescen... 64 4e-09
BC123746_1(BC123746|pid:none) Bos taurus similar to Lims E prote... 64 6e-09
DQ138707_1(DQ138707|pid:none) Drosophila yakuba strain Tai18 CG3... 64 6e-09
(Q1JQB5) RecName: Full=Filamin-binding LIM protein 1; S... 64 6e-09
DQ118097_1(DQ118097|pid:none) Danio rerio four and half LIM doma... 64 6e-09
AJ703893_1(AJ703893|pid:none) Rattus norvegicus mRNA for actin b... 64 6e-09
BC144410_1(BC144410|pid:none) Homo sapiens paxillin, mRNA (cDNA ... 64 7e-09
AK128712_1(AK128712|pid:none) Homo sapiens cDNA FLJ46879 fis, cl... 64 7e-09
DQ138705_1(DQ138705|pid:none) Drosophila simulans strain Ky-a CG... 64 7e-09
(Q5REN1) RecName: Full=Filamin-binding LIM protein 1; S... 64 7e-09
D86863_1(D86863|pid:none) Homo sapiens mRNA for paxillin gamma, ... 64 7e-09
BC050503_1(BC050503|pid:none) Danio rerio LIM domain containing ... 64 7e-09
(P49023) RecName: Full=Paxillin; &D86862_1(D86862|pid:none) 64 7e-09
(Q9Z1Z9) RecName: Full=PDZ and LIM domain protein 7; AltName: Fu... 64 7e-09
FN317474_1(FN317474|pid:none) Schistosoma japonicum isolate Anhu... 64 7e-09
(O35115) RecName: Full=Four and a half LIM domains protein 2; ... 64 7e-09
AC004263_2(AC004263|pid:none) Homo sapiens PAC clone 278C19 from... 64 7e-09
(Q8WUP2) RecName: Full=Filamin-binding LIM protein 1; S... 64 7e-09
BC005341_1(BC005341|pid:none) Homo sapiens LIM and senescent cel... 64 7e-09
AF312926_1(AF312926|pid:none) Drosophila melanogaster focal cont... 63 9e-09
AE014134_3180(AE014134|pid:none) Drosophila melanogaster chromos... 63 9e-09
AE014134_3183(AE014134|pid:none) Drosophila melanogaster chromos... 63 9e-09
BT044877_1(BT044877|pid:none) Salmo salar clone ssal-rgf-506-108... 63 9e-09
(Q292U5) RecName: Full=Protein espinas; 63 9e-09
AE014134_3184(AE014134|pid:none) Drosophila melanogaster chromos... 63 9e-09
AY122248_1(AY122248|pid:none) Drosophila melanogaster SD04793 fu... 63 9e-09
AB048194_1(AB048194|pid:none) Drosophila melanogaster DPXN mRNA ... 63 9e-09
BC072204_1(BC072204|pid:none) Xenopus laevis hypothetical protei... 63 9e-09
AJ493397_1(AJ493397|pid:none) Suberites domuncula partial mRNA f... 63 1e-08
FN317962_1(FN317962|pid:none) Schistosoma japonicum isolate Anhu... 63 1e-08
(Q9NR12) RecName: Full=PDZ and LIM domain protein 7; AltName: Fu... 63 1e-08
AK014954_1(AK014954|pid:none) Mus musculus adult male testis cDN... 63 1e-08
AY094898_1(AY094898|pid:none) Drosophila melanogaster RE73081 fu... 63 1e-08
U14530_1(U14530|pid:none) Onchocerca volvulus Ovl3-1 mRNA, parti... 63 1e-08
A55050(A55050) enigma - human &L35240_1(L35240|pid:none) 63 1e-08
AF345905_1(AF345905|pid:none) Homo sapiens LIM mineralization pr... 63 1e-08
BC125983_1(BC125983|pid:none) Xenopus laevis androgen receptor c... 63 1e-08
AK151235_1(AK151235|pid:none) Mus musculus bone marrow macrophag... 62 2e-08
CS300582_1(CS300582|pid:none) Sequence 90 from Patent EP1661986. 62 2e-08
AL450998_6(AL450998|pid:none) Human DNA sequence from clone RP11... 62 2e-08
AF459643_1(AF459643|pid:none) Homo sapiens filamin-binding LIM p... 62 2e-08
AY223359_1(AY223359|pid:none) Schistosoma japonicum SJCHGC00739 ... 62 2e-08
BT082154_1(BT082154|pid:none) Anoplopoma fimbria clone afim-evh-... 62 2e-08
(Q91XD2) RecName: Full=LIM and senescent cell antigen-like-conta... 62 2e-08
BC098954_1(BC098954|pid:none) Xenopus laevis LIM protein prickle... 62 2e-08
BC095840_1(BC095840|pid:none) Danio rerio LIM and senescent cell... 62 2e-08
AY641810_1(AY641810|pid:none) Rattus norvegicus myocardial ische... 62 3e-08
DQ268534_1(DQ268534|pid:none) Heterodera glycines UNC-97-like pr... 62 3e-08
BC003298_1(BC003298|pid:none) Mus musculus paxillin, mRNA (cDNA ... 62 3e-08
DQ266432_1(DQ266432|pid:none) Homo sapiens FHL2 isoform 5 mRNA, ... 62 3e-08
AF172845_1(AF172845|pid:none) Manduca sexta death-associated LIM... 62 3e-08
AY892743_1(AY892743|pid:none) Synthetic construct Homo sapiens c... 62 3e-08
AY971603_1(AY971603|pid:none) Xenopus laevis Hic-5 (Ara-55) mRNA... 62 3e-08
AF293882_1(AF293882|pid:none) Mus musculus paxillin alpha mRNA, ... 62 3e-08
DQ062808_1(DQ062808|pid:none) Drosophila melanogaster unknown (C... 62 3e-08
FN357490_10(FN357490|pid:none) Schistosoma mansoni genome sequen... 62 3e-08
BC171497_1(BC171497|pid:none) Danio rerio LIM domain containing ... 62 3e-08
AK148060_1(AK148060|pid:none) Mus musculus B16 F10Y cells cDNA, ... 62 3e-08
AK171436_1(AK171436|pid:none) Mus musculus B6-derived CD11 +ve d... 62 3e-08
DQ062809_1(DQ062809|pid:none) Drosophila simulans unknown (CG316... 62 3e-08
EF215436_1(EF215436|pid:none) Callithrix jacchus clone A03-50.1_... 61 4e-08
(Q2KI95) RecName: Full=Four and a half LIM domains protein 2; ... 61 4e-08
AF220153_1(AF220153|pid:none) Homo sapiens four and a half LIM d... 61 5e-08
DQ012167_1(DQ012167|pid:none) Danio rerio cypher/ZASP splice var... 61 5e-08
DQ012157_1(DQ012157|pid:none) Danio rerio cypher/ZASP splice var... 61 5e-08
DQ012163_1(DQ012163|pid:none) Danio rerio cypher/ZASP splice var... 61 5e-08
BT044983_1(BT044983|pid:none) Salmo salar clone ssal-rgf-509-033... 61 5e-08
(Q6INU3) RecName: Full=PDZ and LIM domain protein 7; &BC072179_... 61 5e-08
DQ012164_1(DQ012164|pid:none) Danio rerio cypher/ZASP splice var... 61 5e-08
BC171171_1(BC171171|pid:none) Xenopus tropicalis cDNA clone MGC:... 60 6e-08
BC157176_1(BC157176|pid:none) Xenopus tropicalis hypothetical pr... 60 6e-08
AB056465_1(AB056465|pid:none) Drosophila melanogaster PDLP mRNA ... 60 6e-08
T09504(T09504;PD0036) LIM-protein FHL3, skeletal muscle - human ... 60 8e-08
AB174411_1(AB174411|pid:none) Macaca fascicularis brain cDNA clo... 60 8e-08
BT044731_1(BT044731|pid:none) Salmo salar clone ssal-rgf-502-086... 60 8e-08
AE017348_237(AE017348|pid:none) Cryptococcus neoformans var. neo... 60 8e-08
(Q3ZBI6) RecName: Full=Four and a half LIM domains protein 3; ... 60 8e-08
AJ133767_1(AJ133767|pid:none) Homo sapiens mRNA for ZASP protein... 60 8e-08
BC123619_1(BC123619|pid:none) Bos taurus zyxin, mRNA (cDNA clone... 60 8e-08
AK297645_1(AK297645|pid:none) Homo sapiens cDNA FLJ56117 complet... 60 1e-07
AY277587_1(AY277587|pid:none) Sus scrofa four and a half LIM dom... 60 1e-07
DQ177283_1(DQ177283|pid:none) Mus musculus ENH1 (Pdlim5) mRNA, c... 60 1e-07
(Q5F464) RecName: Full=Lipoma-preferred partner homolog; &AJ851... 60 1e-07
AL606907_6(AL606907|pid:none) Mouse DNA sequence from clone RP23... 60 1e-07
AL671998_3(AL671998|pid:none) Mouse DNA sequence from clone RP23... 60 1e-07
(Q28FG2) RecName: Full=Prickle-like protein 1; &CR761986_1(CR76... 60 1e-07
(P53666) RecName: Full=LIM domain kinase 2; Short=LIMK-... 59 1e-07
DQ307067_1(DQ307067|pid:none) Homo sapiens bone marrow four and ... 59 1e-07
BC026563_1(BC026563|pid:none) Mus musculus leupaxin, mRNA (cDNA ... 59 1e-07
AF134772_1(AF134772|pid:none) Mus musculus LIM protein (Fhl3) mR... 59 2e-07
AK031415_1(AK031415|pid:none) Mus musculus 13 days embryo male t... 59 2e-07
AY891386_1(AY891386|pid:none) Synthetic construct Homo sapiens c... 59 2e-07
AK035743_1(AK035743|pid:none) Mus musculus adult male urinary bl... 59 2e-07
(Q99N69) RecName: Full=Leupaxin; &AB053936_1(AB053936|pid:none)... 59 2e-07
AK147812_1(AK147812|pid:none) Mus musculus melanocyte cDNA, RIKE... 59 2e-07
AF047353_1(AF047353|pid:none) Helianthus annuus LIM domain prote... 59 2e-07
(Q13643) RecName: Full=Four and a half LIM domains protein 3; ... 59 2e-07
AF118146_1(AF118146|pid:none) Oryctolagus cuniculus leupaxin mRN... 59 2e-07
BC140671_1(BC140671|pid:none) Bos taurus prickle homolog 1, mRNA... 59 2e-07
CR457425_1(CR457425|pid:none) Homo sapiens full open reading fra... 59 2e-07
(Q62920) RecName: Full=PDZ and LIM domain protein 5; AltName: Fu... 59 2e-07
BC088217_1(BC088217|pid:none) Rattus norvegicus leupaxin, mRNA (... 59 2e-07
AJ002382_1(AJ002382|pid:none) Dictyostelium discoideum mRNA for ... 59 2e-07
AM920427_34(AM920427|pid:none) Penicillium chrysogenum Wisconsin... 58 3e-07
AY055473_1(AY055473|pid:none) Xenopus laevis LIM protein prickle... 58 3e-07
AK223165_1(AK223165|pid:none) Homo sapiens mRNA for leupaxin var... 58 3e-07
(O54785) RecName: Full=LIM domain kinase 2; Short=LIMK-... 58 3e-07
(O60711) RecName: Full=Leupaxin; &AF062075_1(AF062075|pid:none)... 58 3e-07
CR536531_1(CR536531|pid:none) Homo sapiens full open reading fra... 58 3e-07
JC5813(JC5813)LIM motif-containing protein kinase (EC 2.7.1.-) 2... 58 3e-07
(Q90WV2) RecName: Full=Prickle-like protein 1-B; AltName: Full=X... 58 3e-07
CR382135_809(CR382135|pid:none) Debaryomyces hansenii chromosome... 58 3e-07
AM393400_1(AM393400|pid:none) Synthetic construct Homo sapiens c... 58 3e-07
AK299264_1(AK299264|pid:none) Homo sapiens cDNA FLJ51550 complet... 58 3e-07
CR382135_738(CR382135|pid:none) Debaryomyces hansenii strain CBS... 58 3e-07
AB005140_1(AB005140|pid:none) Mus musculus limk2 gene for LIMK2,... 58 3e-07
AK093471_1(AK093471|pid:none) Homo sapiens cDNA FLJ36152 fis, cl... 58 4e-07
AK056499_1(AK056499|pid:none) Homo sapiens cDNA FLJ31937 fis, cl... 58 4e-07
AK122881_1(AK122881|pid:none) Homo sapiens cDNA FLJ16528 fis, cl... 58 4e-07
BC020145_1(BC020145|pid:none) Mus musculus PDZ and LIM domain 5,... 58 4e-07
BC118126_1(BC118126|pid:none) Bos taurus leupaxin, mRNA (cDNA cl... 58 4e-07
AK302309_1(AK302309|pid:none) Homo sapiens cDNA FLJ61463 complet... 58 4e-07
AK147999_1(AK147999|pid:none) Mus musculus melanocyte cDNA, RIKE... 58 4e-07
AY377857_1(AY377857|pid:none) Sus scrofa four and a half LIM dom... 58 4e-07
CR762227_1(CR762227|pid:none) Xenopus tropicalis finished cDNA, ... 58 4e-07
(Q96MT3) RecName: Full=Prickle-like protein 1; AltName: Full=RES... 58 4e-07
(Q8CI51) RecName: Full=PDZ and LIM domain protein 5; AltName: Fu... 58 4e-07
AE014135_185(AE014135|pid:none) Drosophila melanogaster chromoso... 58 4e-07
AE014135_184(AE014135|pid:none) Drosophila melanogaster chromoso... 58 4e-07
AL078638_9(AL078638|pid:none) Human DNA sequence from clone RP11... 58 4e-07
AK298925_1(AK298925|pid:none) Homo sapiens cDNA FLJ53160 complet... 57 5e-07
AB209531_1(AB209531|pid:none) Homo sapiens mRNA for Enigma homol... 57 5e-07
AM393306_1(AM393306|pid:none) Synthetic construct Homo sapiens c... 57 5e-07
AL929504_1(AL929504|pid:none) Zebrafish DNA sequence from clone ... 57 5e-07
AL606907_5(AL606907|pid:none) Mouse DNA sequence from clone RP23... 57 5e-07
U15158_1(U15158|pid:none) Homo sapiens ESP-2 mRNA, partial cds. 57 5e-07
(Q15942) RecName: Full=Zyxin; AltName: Full=Zyxin-2; &AC092214_... 57 5e-07
BC002323_1(BC002323|pid:none) Homo sapiens zyxin, mRNA (cDNA clo... 57 5e-07
AK291624_1(AK291624|pid:none) Homo sapiens cDNA FLJ76869 complet... 57 5e-07
AK299005_1(AK299005|pid:none) Homo sapiens cDNA FLJ53163 complet... 57 5e-07
AM393813_1(AM393813|pid:none) Synthetic construct Homo sapiens c... 57 5e-07
BC017183_1(BC017183|pid:none) Homo sapiens zyxin, mRNA (cDNA clo... 57 5e-07
(Q96HC4) RecName: Full=PDZ and LIM domain protein 5; AltName: Fu... 57 5e-07
BC145754_1(BC145754|pid:none) Mus musculus prickle-like 2 (Droso... 57 7e-07
(Q7Z4I7) RecName: Full=LIM and senescent cell antigen-like-conta... 57 7e-07
AF527766_1(AF527766|pid:none) Homo sapiens tissue-type spleen LI... 57 7e-07
(Q3U5C7) RecName: Full=Prickle-like protein 1; &AK153711_1(AK15... 57 7e-07
AF520987_1(AF520987|pid:none) Homo sapiens LIMS2 (LIMS2) mRNA, c... 57 7e-07
AF527767_1(AF527767|pid:none) Homo sapiens tissue-type uterus LI... 57 7e-07
BC099897_1(BC099897|pid:none) Mus musculus prickle-like 2 (Droso... 57 7e-07
(Q2KJ33) RecName: Full=LIM and senescent cell antigen-like-conta... 57 7e-07
AK055363_1(AK055363|pid:none) Homo sapiens cDNA FLJ30801 fis, cl... 57 7e-07
AF527769_1(AF527769|pid:none) Homo sapiens tissue-type brain LIM... 57 7e-07
AE014297_765(AE014297|pid:none) Drosophila melanogaster chromoso... 57 9e-07
AB016586_1(AB016586|pid:none) Mus musculus mRNA for ENH1, comple... 57 9e-07
AE014297_766(AE014297|pid:none) Drosophila melanogaster chromoso... 57 9e-07
AE014297_764(AE014297|pid:none) Drosophila melanogaster chromoso... 57 9e-07
AB042816_1(AB042816|pid:none) Drosophila melanogaster DLIMK1 mRN... 56 1e-06
(Q8IR79) RecName: Full=LIM domain kinase 1; Short=LIMK-... 56 1e-06
AM270339_38(AM270339|pid:none) Aspergillus niger contig An15c012... 56 1e-06
AE014298_1862(AE014298|pid:none) Drosophila melanogaster chromos... 56 1e-06
AF116851_1(AF116851|pid:none) Nicotiana tabacum LIM domain prote... 56 1e-06
BC139696_1(BC139696|pid:none) Danio rerio zgc:152958, mRNA (cDNA... 56 2e-06
CU638735_1(CU638735|pid:none) Zebrafish DNA sequence from clone ... 56 2e-06
AK051345_1(AK051345|pid:none) Mus musculus 12 days embryo spinal... 56 2e-06
BC036085_1(BC036085|pid:none) Homo sapiens four and a half LIM d... 56 2e-06
DQ399521_1(DQ399521|pid:none) Branchiostoma floridae LIM-homeodo... 56 2e-06
A79997_1(A79997|pid:none) Sequence 1 from Patent WO9625493. 56 2e-06
AC012360_1(AC012360|pid:none) Homo sapiens BAC clone RP11-332H14... 56 2e-06
(Q5XI07) RecName: Full=Lipoma-preferred partner homolog; &BC083... 56 2e-06
BC144076_1(BC144076|pid:none) Homo sapiens LIM domain containing... 56 2e-06
EU436753_1(EU436753|pid:none) Schistosoma mansoni LIMPETin mRNA,... 55 2e-06
FM992695_48(FM992695|pid:none) Candida dubliniensis CD36 chromos... 55 2e-06
BC151921_1(BC151921|pid:none) Danio rerio zgc:171680, mRNA (cDNA... 55 3e-06
AC004665_22(AC004665|pid:none) Arabidopsis thaliana chromosome 2... 55 3e-06
AB451269_1(AB451269|pid:none) Homo sapiens LIMK2 mRNA for LIM do... 55 3e-06
BC162516_1(BC162516|pid:none) Danio rerio prickle-like 1 (Drosop... 55 3e-06
(P53671) RecName: Full=LIM domain kinase 2; Short=LIMK-... 55 3e-06
AK304125_1(AK304125|pid:none) Homo sapiens cDNA FLJ61541 complet... 55 3e-06
CU638712_1(CU638712|pid:none) Zebrafish DNA sequence from clone ... 55 3e-06
BC124831_1(BC124831|pid:none) Danio rerio zgc:154176, mRNA (cDNA... 55 3e-06
CU652212_3(CU652212|pid:none) Zebrafish DNA sequence from clone ... 55 3e-06
BC095708_1(BC095708|pid:none) Danio rerio zgc:112257, mRNA (cDNA... 55 3e-06
(O43052) RecName: Full=Rho-type GTPase-activating protein 1; &A... 54 4e-06
BT003565_1(BT003565|pid:none) Drosophila melanogaster LP02021 fu... 54 4e-06
AE013599_2227(AE013599|pid:none) Drosophila melanogaster chromos... 54 4e-06
AY809875_1(AY809875|pid:none) Schistosoma japonicum SJCHGC04856 ... 54 4e-06
AE013599_2223(AE013599|pid:none) Drosophila melanogaster chromos... 54 4e-06
AE013599_2226(AE013599|pid:none) Drosophila melanogaster chromos... 54 4e-06
FJ744593_1(FJ744593|pid:none) Sparus aurata four and a half LIM ... 54 4e-06
AF399843_1(AF399843|pid:none) Rattus norvegicus REST/NRSF-intera... 54 6e-06
(Q32L23) RecName: Full=LIM domain kinase 2; Short=LIMK-... 54 6e-06
U93305_2(U93305|pid:none) Homo sapiens A4 differentiation-depend... 54 6e-06
BC087108_1(BC087108|pid:none) Rattus norvegicus LIM and senescen... 54 6e-06
(Q71QF9) RecName: Full=Prickle-like protein 1; AltName: Full=RES... 54 6e-06
BT059482_1(BT059482|pid:none) Salmo salar clone ssal-rgf-529-375... 54 7e-06
AY141037_1(AY141037|pid:none) Xenopus laevis LIM homeobox protei... 54 7e-06
AL021177_2(AL021177|pid:none) Caenorhabditis elegans YAC Y1A5A, ... 54 7e-06
BC093258_1(BC093258|pid:none) Danio rerio LIM homeobox 9, mRNA (... 54 7e-06
EU496813_1(EU496813|pid:none) Nicotiana tabacum LIM domain prote... 54 7e-06
FN392319_159(FN392319|pid:none) Pichia pastoris GS115 chromosome... 54 7e-06
AK027597_1(AK027597|pid:none) Homo sapiens cDNA FLJ14691 fis, cl... 54 7e-06
AB005882_1(AB005882|pid:none) Gallus gallus mRNA for LIM homeodo... 54 7e-06
BT021566_1(BT021566|pid:none) Bos taurus LIM domain only 6 (LMO6... 53 1e-05
AB034690_1(AB034690|pid:none) Drosophila melanogaster mRNA for d... 53 1e-05
T20634(T20634) hypothetical protein F09B9.2 - Caenorhabditis ele... 53 1e-05
AY810070_1(AY810070|pid:none) Schistosoma japonicum SJCHGC05784 ... 53 1e-05
AB269883_1(AB269883|pid:none) Rana rugosa Lhx9 beta mRNA for LIM... 53 1e-05
(A2PZF9) RecName: Full=LIM/homeobox protein Lhx9; Short... 53 1e-05
AB269884_1(AB269884|pid:none) Rana rugosa Lhx9 gamma mRNA for LI... 53 1e-05
AL929566_1(AL929566|pid:none) Zebrafish DNA sequence from clone ... 53 1e-05
BC162549_1(BC162549|pid:none) Danio rerio LIM homeobox 2, mRNA (... 53 1e-05
FJ438942_1(FJ438942|pid:none) Xenopus laevis LHX9 mRNA, complete... 53 1e-05
AL929566_2(AL929566|pid:none) Zebrafish DNA sequence from clone ... 53 1e-05
DQ146407_1(DQ146407|pid:none) Danio rerio lim homeobox transcrip... 53 1e-05
AE013599_305(AE013599|pid:none) Drosophila melanogaster chromoso... 53 1e-05
BC127381_1(BC127381|pid:none) Danio rerio LIM homeobox 2, mRNA (... 53 1e-05
(Q7QJT4) RecName: Full=Protein prickle; 52 2e-05
CR457211_1(CR457211|pid:none) Homo sapiens full open reading fra... 52 2e-05
AY449458_28(AY449458|pid:none) Oikopleura dioica clone BACOIKO00... 52 2e-05
AK314788_1(AK314788|pid:none) Homo sapiens cDNA, FLJ95658, highl... 52 2e-05
(A2I8Z7) RecName: Full=LIM/homeobox protein Lhx9; Short... 52 2e-05
AK303200_1(AK303200|pid:none) Homo sapiens cDNA FLJ53948 complet... 52 2e-05
(Q1LWV4) RecName: Full=LIM/homeobox protein Lhx9; Short... 52 2e-05
AB036841_1(AB036841|pid:none) Ciona intestinalis Ci-pk2 mRNA for... 52 2e-05
AB036840_1(AB036840|pid:none) Ciona intestinalis Ci-pk1 mRNA for... 52 2e-05
BC128722_1(BC128722|pid:none) Rattus norvegicus cDNA clone MGC:1... 52 2e-05
AL590115_6(AL590115|pid:none) Human DNA sequence from clone RP11... 52 2e-05
(P50458) RecName: Full=LIM/homeobox protein Lhx2; Short... 52 2e-05
A47179(A47179)homeotic protein LH-2 - rat 52 2e-05
AP009124_1(AP009124|pid:none) Sus scrofa genomic DNA, chromosome... 52 2e-05
DQ143898_1(DQ143898|pid:none) Mus musculus transforming growth f... 52 2e-05
DQ143893_1(DQ143893|pid:none) Mus musculus transforming growth f... 52 2e-05
AJ243851_1(AJ243851|pid:none) Mus musculus mRNA for putative LIM... 52 2e-05
AJ243852_2(AJ243852|pid:none) Mus musculus Lhx9 gene, partial ex... 52 2e-05
AF527770_1(AF527770|pid:none) Homo sapiens tissue-type brain LIM... 52 2e-05
(Q9Z0S2) RecName: Full=LIM/homeobox protein Lhx2; Short... 52 2e-05
(Q90881) RecName: Full=LIM/homeobox protein Lhx9; Short... 52 2e-05
AL590115_3(AL590115|pid:none) Human DNA sequence from clone RP11... 52 2e-05
DQ143900_1(DQ143900|pid:none) Mus musculus transforming growth f... 52 2e-05
BC085918_1(BC085918|pid:none) Rattus norvegicus prickle homolog ... 52 2e-05
DQ143891_1(DQ143891|pid:none) Mus musculus transforming growth f... 52 2e-05
AK083704_1(AK083704|pid:none) Mus musculus 9 days embryo whole b... 52 2e-05
JC5658(JC5658) LIM domain-containing homeodomain LH-2B - chicken... 52 2e-05
AF527619_1(AF527619|pid:none) Rattus norvegicus LIM-homeodomain ... 52 2e-05
AF124735_1(AF124735|pid:none) Homo sapiens LIM-homeodomain prote... 52 2e-05
AJ243852_1(AJ243852|pid:none) Mus musculus Lhx9 gene, partial ex... 52 2e-05
(Q9NQ69) RecName: Full=LIM/homeobox protein Lhx9; Short... 52 2e-05
(Q3YBZ6) RecName: Full=Transforming growth factor beta-1-induced... 52 2e-05
AJ277915_1(AJ277915|pid:none) Homo sapiens partial mRNA for LIM-... 52 2e-05
BC023671_1(BC023671|pid:none) Mus musculus prickle homolog 3 (Dr... 52 2e-05
(Q68EY3) RecName: Full=LIM/homeobox protein Lhx9; Short... 52 3e-05
AK037217_1(AK037217|pid:none) Mus musculus 6 days neonate skin c... 52 3e-05
(A0JNI8) RecName: Full=LIM/homeobox protein Lhx9; Short... 52 3e-05
AL929186_6(AL929186|pid:none) Mouse DNA sequence from clone RP23... 52 3e-05
BT021834_1(BT021834|pid:none) Bos taurus LIM homeobox 9 (LHX9), ... 52 3e-05
AB188255_1(AB188255|pid:none) Danio rerio lhx2 mRNA for LIM home... 52 3e-05
AP007161_355(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 51 4e-05
BC082407_1(BC082407|pid:none) Xenopus laevis MGC82038 protein, m... 51 4e-05
AY892297_1(AY892297|pid:none) Synthetic construct Homo sapiens c... 51 5e-05
BC104510_1(BC104510|pid:none) Bos taurus transforming growth fac... 51 5e-05
AB007836_1(AB007836|pid:none) Homo sapiens mRNA for Hic-5, parti... 51 5e-05
(Q3MHZ4) RecName: Full=Transforming growth factor beta-1-induced... 51 5e-05
AK313327_1(AK313327|pid:none) Homo sapiens cDNA, FLJ93847, Homo ... 51 5e-05
U11701_1(U11701|pid:none) Human LIM-homeobox domain protein (hLH... 51 5e-05
(O43294) RecName: Full=Transforming growth factor beta-1-induced... 51 5e-05
(Q292U2) RecName: Full=Protein prickle; 51 5e-05
(Q54L00) RecName: Full=Probable LIM domain-containing serine/thr... 51 5e-05
Z54235_3(Z54235|pid:none) Caenorhabditis elegans Cosmid C09G9, c... 50 6e-05
AB269886_1(AB269886|pid:none) Rana rugosa Lhx9 epsilon mRNA for ... 50 6e-05
AM269973_16(AM269973|pid:none) Aspergillus niger contig An01c026... 50 6e-05
T19156(T19156;T24830) probable metal binding protein T11B7.4a - ... 50 6e-05
(A0M8R4) RecName: Full=Testin; &(Q2IBA3) RecName: Fu 50 6e-05
AB269885_1(AB269885|pid:none) Rana rugosa Lhx9 delta mRNA for LI... 50 6e-05
Z54235_5(Z54235|pid:none) Caenorhabditis elegans Cosmid C09G9, c... 50 6e-05
CR382127_561(CR382127|pid:none) Yarrowia lipolytica strain CLIB1... 50 6e-05
(Q99PD6) RecName: Full=Transforming growth factor beta-1-induced... 50 6e-05
FN357330_7(FN357330|pid:none) Schistosoma mansoni genome sequenc... 50 8e-05
AJ243709_1(AJ243709|pid:none) Drosophila melanogaster mRNA for p... 50 8e-05
AJ243710_1(AJ243710|pid:none) Drosophila melanogaster mRNA for p... 50 8e-05
BX842635_27(BX842635|pid:none) Neurospora crassa DNA linkage gro... 50 1e-04
AC009273_19(AC009273|pid:none) Sequence of BAC T1N6 from Arabido... 50 1e-04
(Q2QL92) RecName: Full=Testin; 50 1e-04
AL137898_13(AL137898|pid:none) Arabidopsis thaliana DNA chromoso... 50 1e-04
(Q2QLG8) RecName: Full=Testin; 50 1e-04
FN317571_1(FN317571|pid:none) Schistosoma japonicum isolate Anhu... 50 1e-04
BT075435_1(BT075435|pid:none) Osmerus mordax clone omor-rgc-510-... 50 1e-04
(Q2QLE3) RecName: Full=Testin; 50 1e-04
CR860892_1(CR860892|pid:none) Pongo abelii mRNA; cDNA DKFZp469E2... 50 1e-04
AK317367_1(AK317367|pid:none) Arabidopsis thaliana AT1G01780 mRN... 50 1e-04
AF113518_1(AF113518|pid:none) Mus musculus LIM homeobox protein ... 50 1e-04
AF245357_1(AF245357|pid:none) Homo sapiens TESTIN 3 mRNA, comple... 50 1e-04
BC045528_1(BC045528|pid:none) Mus musculus PDZ and LIM domain 7,... 50 1e-04
AK315644_1(AK315644|pid:none) Homo sapiens cDNA, FLJ96732, highl... 49 1e-04
AK300546_1(AK300546|pid:none) Homo sapiens cDNA FLJ50681 complet... 49 1e-04
AY813079_1(AY813079|pid:none) Schistosoma japonicum SJCHGC07563 ... 49 1e-04
(Q09YL5) RecName: Full=Testin; 49 1e-04
(Q2IBH0) RecName: Full=Testin; 49 1e-04
BC158595_1(BC158595|pid:none) Rattus norvegicus testis derived t... 49 1e-04
(A0M8U6) RecName: Full=Testin; 49 1e-04
AM920437_541(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 49 1e-04
AF116343_1(AF116343|pid:none) Homo sapiens androgen receptor coa... 49 1e-04
AB493659_1(AB493659|pid:none) Arabidopsis thaliana At3g61230 mRN... 49 2e-04
AK222840_1(AK222840|pid:none) Homo sapiens mRNA for testin isofo... 49 2e-04
(P53412) RecName: Full=LIM/homeobox protein Lhx3; Short... 49 2e-04
AE014296_2990(AE014296|pid:none) Drosophila melanogaster chromos... 49 2e-04
(P18751) RecName: Full=Oocyte zinc finger protein XlCOF7.1; Flag... 49 2e-04
AF184886_1(AF184886|pid:none) Nicotiana tabacum LIM domain prote... 49 2e-04
AK094511_1(AK094511|pid:none) Homo sapiens cDNA FLJ37192 fis, cl... 49 2e-04
(Q7ZXE9) RecName: Full=Testin; AltName: Full=Xtes; &BC045027_1(... 48 3e-04
(Q09YI0) RecName: Full=Testin; 48 3e-04
U60117_1(U60117|pid:none) Human skeletal muscle LIM-protein SLIM... 48 3e-04
(Q2QLC3) RecName: Full=Testin; 48 3e-04
(Q55BI0) RecName: Full=LIM domain-containing protein DDB_G0271356; 48 3e-04
U52003_8(U52003|pid:none) Caenorhabditis elegans cosmid ZK381, c... 48 3e-04
>U83086_1(U83086|pid:none) Dictyostelium discoideum LimA (limA) mRNA,
partial cds.
Length = 623
Score = 454 bits (1168), Expect = e-126
Identities = 209/218 (95%), Positives = 212/218 (97%)
Frame = +1
Query: 10 KKKYTHKQLQPIVSSGKNCKRCKLEIFGNTLINHLQETYHPECFKCSNCFSSIVDPYFTE 189
K+K + + IVSSGKNCKRCKLEIFGNTLINHLQETYHPECFKCSNCFSSIVDPYFTE
Sbjct: 406 KEKVYTQTITTIVSSGKNCKRCKLEIFGNTLINHLQETYHPECFKCSNCFSSIVDPYFTE 465
Query: 190 PSTNKIFCAKCQIVLNDLAKPKRDSLGFCCSCYKFLTEEDDIIVIDKEKYHNKCFKCSSC 369
PSTNKIFCAKCQIVLNDLAKPKRDSLGFCCSCYKFLTEEDDIIVIDKEKYHNKCFKCSSC
Sbjct: 466 PSTNKIFCAKCQIVLNDLAKPKRDSLGFCCSCYKFLTEEDDIIVIDKEKYHNKCFKCSSC 525
Query: 370 KEVIRGNNFSREQMTSTSSNYCCNTCLHSGRVDKCAYCHGVILGVSMLAMGQNYHPKCFK 549
KEVIRGNNFSREQMTSTSSNYCCNTCLHSGRVDKCAYCHGVILGVSMLAMGQNYHPKCFK
Sbjct: 526 KEVIRGNNFSREQMTSTSSNYCCNTCLHSGRVDKCAYCHGVILGVSMLAMGQNYHPKCFK 585
Query: 550 CSTCHVVIRHNTPFTINKNQTPTCQNCINTSSVGVASR 663
CSTCHVVIRHNTPFTINKNQTPTCQNCINTSSVGVASR
Sbjct: 586 CSTCHVVIRHNTPFTINKNQTPTCQNCINTSSVGVASR 623
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 970,823,027
Number of extensions: 17695466
Number of successful extensions: 65274
Number of sequences better than 10.0: 1230
Number of HSP's gapped: 61730
Number of HSP's successfully gapped: 2406
Length of query: 262
Length of database: 1,051,180,864
Length adjustment: 126
Effective length of query: 136
Effective length of database: 643,374,430
Effective search space: 87498922480
Effective search space used: 87498922480
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
1 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
2 |
| SH (FL, L) |
1 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |