Contig-U12617-1
Contig ID Contig-U12617-1
Contig update 2002.12.18
Contig sequence
>Contig-U12617-1 (Contig-U12617-1Q) /CSM_Contig/Contig-U12617-1Q.Seq.d
AATTTTCATAACATTACCTCCATTTGCTGCAACATAAAGAAAATGAAATG
CGAAACCGTTATGATTCTTTGGCATAATAAAGATCCAATTTATTCTGCTG
ATTTTGACCCAACATCAAATAAATTTTGTACTACTGGTTTTGATAATGAA
ATTAAAATATGGGGATATACAAAGAATAAAGATGGACATTTATCAGTTGA
ATTTTTATCAAGTTTAGCTAAACATGTCAAACCAGTTAATATTGCAAGAT
TTTCACCTGGTGGTAATTTATTAGCATCAGGAAGTGATGATGGTTCAATT
GTAATTTGGAGATTAAATCAAAATGCAATACCACCATCTGACTCATCAAT
GAAAGAGATTTGGTCAATTGTAACCGTTTTACGTGTTACTACTGATGTAT
ATGATCTCTCTTGGTCTTGTGATGGTCAATACCTATCTACTGTTAGTACT
GATAATAGTGTTTCAATTTGGAGTCCTCTATCTAAAACACATCATCAATT
AATTACAGAGCATAGTCATTATGTTCAAGGTGTATCATGGGATCCATTAA
ATGATTTTATGATTACCTCAAAGTTCTGATGGTACTTGCAGAATATATAG
AAATGAAAAGAAAAAAAAA

Gap no gap
Contig length 619
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 3626243
End point 3625624
Strand (PLUS/MINUS) MINUS
Number of clones 2
Number of EST 2
Link to clone list U12617
List of clone(s)

est1=CHJ441F,1,620
est2=AFN678F,8,620
Translated Amino Acid sequence
NFHNITSICCNIKKMKCETVMILWHNKDPIYSADFDPTSNKFCTTGFDNEIKIWGYTKNK
DGHLSVEFLSSLAKHVKPVNIARFSPGGNLLASGSDDGSIVIWRLNQNAIPPSDSSMKEI
WSIVTVLRVTTDVYDLSWSCDGQYLSTVSTDNSVSIWSPLSKTHHQLITEHSHYVQGVSW
DPLNDFMITSKF*wylqni*k*kekk


Translated Amino Acid sequence (All Frames)
Frame A:
NFHNITSICCNIKKMKCETVMILWHNKDPIYSADFDPTSNKFCTTGFDNEIKIWGYTKNK
DGHLSVEFLSSLAKHVKPVNIARFSPGGNLLASGSDDGSIVIWRLNQNAIPPSDSSMKEI
WSIVTVLRVTTDVYDLSWSCDGQYLSTVSTDNSVSIWSPLSKTHHQLITEHSHYVQGVSW
DPLNDFMITSKF*wylqni*k*kekk


Frame B:
ifitlppfaat*rk*nakpl*ffgiikiqfilliltqhqinfvllvlimklkygdiqrik
mdiyqlnfyqv*lnmsnqlilqdfhlvviy*hqevmmvql*fgd*ikmqyhhlthq*krf
gql*pfyvlllmymislglvmvntylllvliivfqfgvlylkhiin*lqsivimfkvyhg
ih*mil*lpqssdgtcriyrnekkkk


Frame C:
fs*hylhllqhkenemrnrydsla**rsnlfc*f*pnik*ilyywf***n*nmgiyke*r
wtfis*ifikfs*tcqts*yckiftww*fisirk**wfncnleikskcntti*linerdl
vncnrftcyy*ci*sllvl*wsipiyc*y***cfnlessi*ntssinyra*slcsrcimg
sik*fydylkvlmvlaeyiemkrkk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U12617-1 (Contig-U12617-1Q)
/CSM_Contig/Contig-U12617-1Q.Seq.d
(619 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U12617-1 (Contig-U12617-1Q) /CSM_Contig/Conti... 1209 0.0
Contig-U11863-1 (Contig-U11863-1Q) /CSM_Contig/Conti... 36 0.043
Contig-U09417-1 (Contig-U09417-1Q) /CSM_Contig/Conti... 36 0.043
Contig-U14345-1 (Contig-U14345-1Q) /CSM_Contig/Conti... 34 0.17
Contig-U14343-1 (Contig-U14343-1Q) /CSM_Contig/Conti... 34 0.17
Contig-U14055-1 (Contig-U14055-1Q) /CSM_Contig/Conti... 34 0.17
Contig-U13692-1 (Contig-U13692-1Q) /CSM_Contig/Conti... 34 0.17
Contig-U13001-1 (Contig-U13001-1Q) /CSM_Contig/Conti... 34 0.17
Contig-U12564-1 (Contig-U12564-1Q) /CSM_Contig/Conti... 34 0.17
Contig-U12523-1 (Contig-U12523-1Q) /CSM_Contig/Conti... 34 0.17

>Contig-U12617-1 (Contig-U12617-1Q) /CSM_Contig/Contig-U12617-1Q.Seq.d
Length = 619

Score = 1209 bits (610), Expect = 0.0
Identities = 610/610 (100%)
Strand = Plus / Plus


Query: 1 aattttcataacattacctccatttgctgcaacataaagaaaatgaaatgcgaaaccgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aattttcataacattacctccatttgctgcaacataaagaaaatgaaatgcgaaaccgtt 60


Query: 61 atgattctttggcataataaagatccaatttattctgctgattttgacccaacatcaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgattctttggcataataaagatccaatttattctgctgattttgacccaacatcaaat 120


Query: 121 aaattttgtactactggttttgataatgaaattaaaatatggggatatacaaagaataaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaattttgtactactggttttgataatgaaattaaaatatggggatatacaaagaataaa 180


Query: 181 gatggacatttatcagttgaatttttatcaagtttagctaaacatgtcaaaccagttaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatggacatttatcagttgaatttttatcaagtttagctaaacatgtcaaaccagttaat 240


Query: 241 attgcaagattttcacctggtggtaatttattagcatcaggaagtgatgatggttcaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attgcaagattttcacctggtggtaatttattagcatcaggaagtgatgatggttcaatt 300


Query: 301 gtaatttggagattaaatcaaaatgcaataccaccatctgactcatcaatgaaagagatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtaatttggagattaaatcaaaatgcaataccaccatctgactcatcaatgaaagagatt 360


Query: 361 tggtcaattgtaaccgttttacgtgttactactgatgtatatgatctctcttggtcttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tggtcaattgtaaccgttttacgtgttactactgatgtatatgatctctcttggtcttgt 420


Query: 421 gatggtcaatacctatctactgttagtactgataatagtgtttcaatttggagtcctcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gatggtcaatacctatctactgttagtactgataatagtgtttcaatttggagtcctcta 480


Query: 481 tctaaaacacatcatcaattaattacagagcatagtcattatgttcaaggtgtatcatgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tctaaaacacatcatcaattaattacagagcatagtcattatgttcaaggtgtatcatgg 540


Query: 541 gatccattaaatgattttatgattacctcaaagttctgatggtacttgcagaatatatag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gatccattaaatgattttatgattacctcaaagttctgatggtacttgcagaatatatag 600


Query: 601 aaatgaaaag 610
||||||||||
Sbjct: 601 aaatgaaaag 610


>Contig-U11863-1 (Contig-U11863-1Q) /CSM_Contig/Contig-U11863-1Q.Seq.d
Length = 1405

Score = 36.2 bits (18), Expect = 0.043
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 189 tttatcagttgaattttt 206
||||||||||||||||||
Sbjct: 724 tttatcagttgaattttt 741


>Contig-U09417-1 (Contig-U09417-1Q) /CSM_Contig/Contig-U09417-1Q.Seq.d
Length = 621

Score = 36.2 bits (18), Expect = 0.043
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 169 acaaagaataaagatgga 186
||||||||||||||||||
Sbjct: 353 acaaagaataaagatgga 370


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8780
Number of Sequences: 6905
Number of extensions: 8780
Number of successful extensions: 950
Number of sequences better than 10.0: 101
length of query: 619
length of database: 5,674,871
effective HSP length: 16
effective length of query: 603
effective length of database: 5,564,391
effective search space: 3355327773
effective search space used: 3355327773
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.12. 2
Homology vs DNA
Query= Contig-U12617-1 (Contig-U12617-1Q) /CSM_Contig/Contig-U12617-1Q.Seq.d
(619 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ366788) Dictyostelium discoideum cDNA clone:ddc40b12, 5' ... 1134 0.0 2
(BJ328628) Dictyostelium discoideum cDNA clone:dda28k20, 5' ... 1108 0.0 2
(EL478871) CHUL7393.b1_B01.ab1 CHU(LMS) puzzle sunflower Hel... 56 0.002 1
(EL398394) CFFM9705.b1_B03.ab1 CFF(LMS) safflower Carthamus ... 56 0.002 1
(EL382604) CFFM19948.b1_H20.ab1 CFF(LMS) safflower Carthamus... 56 0.002 1
(EH762737) CNSL8739.b1_F02.ab1 CNS(LMS) yellow starthistle C... 56 0.002 1
(EE614230) CHWM1661.b1_J07.ab1 CHW(LMS) silverleaf sunflower... 56 0.002 1
(DW167449) CLVY5866.b1_D03.ab1 CLV(XYZ) lettuce virosa Lactu... 54 0.006 1
(EY172100) CBTI3533.b1_I19.ab1:P Triphysaria pusilla root ti... 50 0.095 1
(CU499009) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 0.20 6
(CR380956) Candida glabrata strain CBS138 chromosome J compl... 48 0.38 1
(AC213493) Populus trichocarpa clone POP014-L13, complete se... 48 0.38 1
(EH761625) CNSL7624.b1_P10.ab1 CNS(LMS) yellow starthistle C... 48 0.38 1
(EH721753) CNML8128.b1_O15.ab1 CNM(LMS) spotted knapweed Cen... 48 0.38 1
(BU105721) 603005075F1 CSEQCHL01 Gallus gallus cDNA clone Ch... 48 0.38 1
(FD497791) Ltu01b_174_A11_C012.g1 Liriodendron Flower Bud Li... 48 0.38 1
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 36 0.79 18
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 34 1.3 7
(AC165077) Mus musculus BAC clone RP24-369J8 from chromosome... 46 1.5 1
(AC161229) Mus musculus chromosome 7, clone RP24-88J19, comp... 46 1.5 1
(CU463223) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.5 1
(AZ732928) RPCI-24-84L12.TJB RPCI-24 Mus musculus genomic cl... 46 1.5 1
(DU285890) 1098448323340 CHORI-243 Ovis aries genomic clone ... 36 2.7 2
(AL513332) Human DNA sequence from clone RP11-58B8 on chromo... 44 2.8 4
(AL160174) Human DNA sequence from clone RP11-333H4 on chrom... 40 3.3 3
(EJ415280) 1093012177500 Global-Ocean-Sampling_GS-28-01-01-1... 38 3.5 2
(AL161938) Human DNA sequence from clone RP11-268G13 on chro... 36 3.5 4
(AC190409) Gallus gallus BAC clone TAM31-57C9 from chromosom... 44 4.0 4
(B55708) CIT-HSP-2003E19.TR CIT-HSP Homo sapiens genomic clo... 30 4.7 3
(CT573334) Zebrafish DNA sequence from clone DKEY-113E5 in l... 44 5.9 1
(BX005055) Zebrafish DNA sequence from clone CH211-188N23 in... 44 5.9 1
(AC166107) Mus musculus BAC clone RP23-205A7 from chromosome... 44 5.9 1
(AM489269) Vitis vinifera contig VV78X199079.6, whole genome... 44 5.9 1
(AM465704) Vitis vinifera, whole genome shotgun sequence, co... 44 5.9 1
(AM455519) Vitis vinifera contig VV78X169355.12, whole genom... 44 5.9 1
(AM451654) Vitis vinifera contig VV78X148127.9, whole genome... 44 5.9 1
(AM448275) Vitis vinifera contig VV78X097513.3, whole genome... 44 5.9 1
(AM447509) Vitis vinifera contig VV78X189462.14, whole genom... 44 5.9 1
(AM443377) Vitis vinifera contig VV78X080730.12, whole genom... 44 5.9 1
(AC117302) Rattus norvegicus clone CH230-76I22, *** SEQUENCI... 44 5.9 1
(AC108532) Rattus norvegicus clone CH230-91F12, WORKING DRAF... 44 5.9 1
(CT573336) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 5.9 1
(EJ993728) 1093023071056 Global-Ocean-Sampling_GS-30-02-01-1... 44 5.9 1
(EJ960317) 1093018999564 Global-Ocean-Sampling_GS-30-02-01-1... 44 5.9 1
(CZ245342) AIAA-aag40h19.b1 Ancylostoma caninum whole genome... 44 5.9 1
(AG640940) Macaca fuscata fuscata DNA, clone: MSB2-049A10_F,... 44 5.9 1
(BX981653) Forward strand read from insert in 3'HPRT inserti... 44 5.9 1
(AG282293) Mus musculus molossinus DNA, clone:MSMg01-054F04.... 44 5.9 1
(CD721597) VVB184B12_415101 An expressed sequence tag databa... 44 5.9 1
(CD720984) VVB178C12_413875 An expressed sequence tag databa... 44 5.9 1
(CD720433) VVB172B01_412773 An expressed sequence tag databa... 44 5.9 1
(CD720142) VVB169A03_412191 An expressed sequence tag databa... 44 5.9 1
(CD718591) VVB151G09_409089 An expressed sequence tag databa... 44 5.9 1
(CD010799) VVB115G08_343117 An expressed sequence tag databa... 44 5.9 1
(CD009616) VVB094B08_340751 An expressed sequence tag databa... 44 5.9 1
(CD009610) VVB094B02_340739 An expressed sequence tag databa... 44 5.9 1
(CD008606) VVB090H09_338731 An expressed sequence tag databa... 44 5.9 1
(CD007520) VVB072D09_334168 An expressed sequence tag databa... 44 5.9 1
(CD007180) VVB071G03_333488 An expressed sequence tag databa... 44 5.9 1
(CD006865) VVB068B08_332858 An expressed sequence tag databa... 44 5.9 1
(CD005942) VVB062A08_326438 An expressed sequence tag databa... 44 5.9 1
(FF791173) XABT86865.rev Gateway compatible cien cDNA librar... 44 5.9 1
(FF725293) XABT40914.rev Gateway compatible cien cDNA librar... 44 5.9 1
(AM480871) Vitis vinifera, whole genome shotgun sequence, co... 40 7.0 3
(AE016827) Mannheimia succiniciproducens MBEL55E, complete g... 32 8.7 2
(EI347844) GM_WBc0094G22.f GM_WBc Glycine max genomic clone ... 34 9.6 2

>(BJ366788) Dictyostelium discoideum cDNA clone:ddc40b12, 5' end,
single read.
Length = 619

Score = 1134 bits (572), Expect(2) = 0.0
Identities = 575/576 (99%)
Strand = Plus / Plus


Query: 35 taaagaaaatgaaatgcgaaaccgttatgattctttggcataataaagatccaatttatt 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34 taaagaaaatgaaatgcgaaaccgttatgattctttggcataataaagatccaatttatt 93


Query: 95 ctgctgattttgacccaacatcaaataaattttgtactactggttttgataatgaaatta 154
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 94 ctgctgattttgacccaacatcaaataaattttgtaccactggttttgataatgaaatta 153


Query: 155 aaatatggggatatacaaagaataaagatggacatttatcagttgaatttttatcaagtt 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aaatatggggatatacaaagaataaagatggacatttatcagttgaatttttatcaagtt 213


Query: 215 tagctaaacatgtcaaaccagttaatattgcaagattttcacctggtggtaatttattag 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 tagctaaacatgtcaaaccagttaatattgcaagattttcacctggtggtaatttattag 273


Query: 275 catcaggaagtgatgatggttcaattgtaatttggagattaaatcaaaatgcaataccac 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 catcaggaagtgatgatggttcaattgtaatttggagattaaatcaaaatgcaataccac 333


Query: 335 catctgactcatcaatgaaagagatttggtcaattgtaaccgttttacgtgttactactg 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 catctgactcatcaatgaaagagatttggtcaattgtaaccgttttacgtgttactactg 393


Query: 395 atgtatatgatctctcttggtcttgtgatggtcaatacctatctactgttagtactgata 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 atgtatatgatctctcttggtcttgtgatggtcaatacctatctactgttagtactgata 453


Query: 455 atagtgtttcaatttggagtcctctatctaaaacacatcatcaattaattacagagcata 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 atagtgtttcaatttggagtcctctatctaaaacacatcatcaattaattacagagcata 513


Query: 515 gtcattatgttcaaggtgtatcatgggatccattaaatgattttatgattacctcaaagt 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gtcattatgttcaaggtgtatcatgggatccattaaatgattttatgattacctcaaagt 573


Query: 575 tctgatggtacttgcagaatatatagaaatgaaaag 610
||||||||||||||||||||||||||||||||||||
Sbjct: 574 tctgatggtacttgcagaatatatagaaatgaaaag 609

Score = 65.9 bits (33), Expect(2) = 0.0
Identities = 33/33 (100%)
Strand = Plus / Plus


Query: 1 aattttcataacattacctccatttgctgcaac 33
|||||||||||||||||||||||||||||||||
Sbjct: 1 aattttcataacattacctccatttgctgcaac 33

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 758,577,692
Number of extensions: 44915714
Number of successful extensions: 3491650
Number of sequences better than 10.0: 69
Length of query: 619
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 596
Effective length of database: 93,106,754,628
Effective search space: 55491625758288
Effective search space used: 55491625758288
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7. 4
Homology vs Protein
Query= Contig-U12617-1 (Contig-U12617-1Q) /CSM_Contig/Contig-U12617-1Q.Seq.d
(619 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q5R1S9) RecName: Full=Chromatin assembly factor 1 subunit B; ... 160 3e-38
AJ719705_1(AJ719705|pid:none) Gallus gallus mRNA for hypothetica... 160 3e-38
BC045906_1(BC045906|pid:none) Danio rerio chromatin assembly fac... 157 2e-37
BC097460_1(BC097460|pid:none) Rattus norvegicus chromatin assemb... 155 1e-36
AK313152_1(AK313152|pid:none) Homo sapiens cDNA, FLJ93645, highl... 154 1e-36
(Q13112) RecName: Full=Chromatin assembly factor 1 subunit B; ... 154 1e-36
(Q9D0N7) RecName: Full=Chromatin assembly factor 1 subunit B; ... 153 4e-36
BT030593_1(BT030593|pid:none) Bos taurus chromatin assembly fact... 153 4e-36
BC153735_1(BC153735|pid:none) Xenopus tropicalis hypothetical pr... 150 2e-35
AM920433_632(AM920433|pid:none) Penicillium chrysogenum Wisconsi... 138 1e-31
AP004462_22(AP004462|pid:none) Oryza sativa Japonica Group genom... 132 7e-31
AM270147_1(AM270147|pid:none) Aspergillus niger contig An07c0300... 132 8e-30
FN392321_251(FN392321|pid:none) Pichia pastoris GS115 chromosome... 132 1e-29
(O13985) RecName: Full=Uncharacterized WD repeat-containing prot... 130 3e-29
FM992692_328(FM992692|pid:none) Candida dubliniensis CD36 chromo... 128 1e-28
BT041898_1(BT041898|pid:none) Zea mays full-length cDNA clone ZM... 127 3e-28
BT036842_1(BT036842|pid:none) Zea mays full-length cDNA clone ZM... 127 3e-28
AF367178_1(AF367178|pid:none) Drosophila melanogaster chromatin ... 124 2e-27
AE013599_1147(AE013599|pid:none) Drosophila melanogaster chromos... 124 2e-27
CR382125_488(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 123 4e-27
CR382128_588(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 122 8e-27
AE017341_687(AE017341|pid:none) Cryptococcus neoformans var. neo... 120 3e-26
CR380956_273(CR380956|pid:none) Candida glabrata strain CBS138 c... 117 3e-25
AC174308_14(AC174308|pid:none) Medicago truncatula clone mth2-13... 116 4e-25
CP000582_135(CP000582|pid:none) Ostreococcus lucimarinus CCE9901... 111 2e-23
CP001323_449(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 94 2e-18
CP000882_68(CP000882|pid:none) Hemiselmis andersenii chromosome ... 91 2e-17
(Q86HX1) RecName: Full=Protein HIRA; &AC114263_7(AC114263|pid:n... 91 3e-17
(Q6CXX3) RecName: Full=Protein HIR1; &CR382121_203(CR382121|pid... 91 3e-17
(Q4P4R3) RecName: Full=Protein HIR1; 90 4e-17
(Q5KBD2) RecName: Full=Protein HIR1; &AE017349_296(AE017349|pid... 90 6e-17
BX897678_12(BX897678|pid:none) Neurospora crassa DNA linkage gro... 89 8e-17
AM270160_21(AM270160|pid:none) Aspergillus niger contig An08c005... 89 1e-16
AF083031_42(AF083031|pid:none) Guillardia theta nucleomorph chro... 87 3e-16
(Q32SG6) RecName: Full=Protein HIRA; AltName: Full=Histone regul... 86 1e-15
CU633895_330(CU633895|pid:none) Podospora anserina genomic DNA c... 85 1e-15
(Q2UBU2) RecName: Full=Protein HIR1; &AP007161_725(AP007161|pid... 85 1e-15
(O42611) RecName: Full=Protein HIRA; AltName: Full=TUP1-like enh... 85 1e-15
AC025726_37(AC025726|pid:none) Caenorhabditis elegans cosmid Y71... 84 2e-15
X99712_1(X99712|pid:none) M.musculus mRNA for HIRA protein. 84 4e-15
(Q8QFR2) RecName: Full=Protein HIRA; &BC078007_1(BC078007|pid:n... 83 5e-15
(P54198) RecName: Full=Protein HIRA; AltName: Full=TUP1-like enh... 83 5e-15
BC032721_1(BC032721|pid:none) Homo sapiens HIR histone cell cycl... 83 5e-15
I37465(I37465;I37464;S58177) HIRA protein - human &X81844_1(X81... 83 5e-15
CR774200_6(CR774200|pid:none) Zebrafish DNA sequence from clone ... 83 7e-15
X99375_1(X99375|pid:none) G.gallus mRNA for Chira protein. 82 1e-14
AB384712_1(AB384712|pid:none) Synthetic construct DNA, clone: pF... 81 2e-14
DQ340807_1(DQ340807|pid:none) Carassius auratus gibelio HIRA mRN... 81 3e-14
DQ340808_1(DQ340808|pid:none) Carassius auratus HIRA mRNA, compl... 80 4e-14
AF031081_1(AF031081|pid:none) Drosophila melanogaster HIRA homol... 80 4e-14
(Q74ZN0) RecName: Full=Protein HIR1; &AE016820_537(AE016820|pid... 80 5e-14
BT016167_1(BT016167|pid:none) Drosophila melanogaster AT04626 fu... 80 6e-14
(Q4WTC4) RecName: Full=Protein hir1; 80 6e-14
AY069414_1(AY069414|pid:none) Drosophila melanogaster LD11036 fu... 80 6e-14
A59246(A59246;JE0283) HIRA protein - fruit fly (Drosophila melan... 80 6e-14
CP001037_1143(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 79 8e-14
(Q0CQ54) RecName: Full=Protein hir1; 79 8e-14
(Q5BDU4) RecName: Full=Protein hir1; 79 8e-14
(P32479) RecName: Full=Protein HIR1; AltName: Full=Histone trans... 79 1e-13
CU928169_320(CU928169|pid:none) Kluyveromyces thermotolerans str... 78 2e-13
FN357713_5(FN357713|pid:none) Schistosoma mansoni genome sequenc... 78 2e-13
(Q1DHE1) RecName: Full=Protein HIR1; 78 2e-13
FM992689_29(FM992689|pid:none) Candida dubliniensis CD36 chromos... 77 3e-13
(Q0UNC6) RecName: Full=Protein HIR1; 77 3e-13
(Q6BYU4) RecName: Full=Protein HIR1; &CR382133_279(CR382133|pid... 77 5e-13
(Q5ACW8) RecName: Full=Protein HIR1; 75 1e-12
CP000496_65(CP000496|pid:none) Pichia stipitis CBS 6054 chromoso... 74 3e-12
CP001037_1323(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 74 4e-12
FN392321_212(FN392321|pid:none) Pichia pastoris GS115 chromosome... 74 4e-12
AF071881_1(AF071881|pid:none) Drosophila melanogaster Hira isofo... 73 6e-12
CP000393_3289(CP000393|pid:none) Trichodesmium erythraeum IMS101... 72 2e-11
AP009552_5466(AP009552|pid:none) Microcystis aeruginosa NIES-843... 71 2e-11
CP000117_2876(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 70 5e-11
AJ278387_1(AJ278387|pid:none) Xenopus laevis partial mRNA for HI... 70 5e-11
CP000117_1621(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 69 1e-10
AG1889(AG1889) WD-40 repeat protein [imported] - Nostoc sp. (str... 69 1e-10
CP000393_3425(CP000393|pid:none) Trichodesmium erythraeum IMS101... 69 1e-10
CP000117_3846(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 69 1e-10
CP001037_4354(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 68 2e-10
AM778950_12(AM778950|pid:none) Microcystis aeruginosa PCC 7806 g... 68 2e-10
CR380959_376(CR380959|pid:none) Candida glabrata strain CBS138 c... 68 2e-10
BC052856_1(BC052856|pid:none) Mus musculus histone cell cycle re... 68 2e-10
CP000806_2172(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 68 2e-10
S45345(S45345) TUP1-like enhancer - mouse &X75295_1(X75295|pid:... 68 2e-10
AK299950_1(AK299950|pid:none) Homo sapiens cDNA FLJ58422 complet... 67 3e-10
(Q5RD06) RecName: Full=WD repeat-containing protein 51B; &CR858... 67 3e-10
S45344(S45344) TUP1 like enhancer - human &X75296_1(X75296|pid:... 67 3e-10
AK289809_1(AK289809|pid:none) Homo sapiens cDNA FLJ78369 complet... 67 3e-10
CP001291_1475(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 67 3e-10
CT005272_258(CT005272|pid:none) Leishmania major strain Friedlin... 67 3e-10
CP000117_1553(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 67 3e-10
CP000828_20(CP000828|pid:none) Acaryochloris marina MBIC11017, c... 67 3e-10
X77633_1(X77633|pid:none) H.sapiens HIRA mRNA. 67 3e-10
AP007163_34(AP007163|pid:none) Aspergillus oryzae RIB40 genomic ... 67 4e-10
(Q8BHD1) RecName: Full=WD repeat-containing protein 51B; &AK045... 67 4e-10
CP000806_3916(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 67 5e-10
CP001291_1144(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 67 5e-10
BA000045_1630(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 67 5e-10
AP008931_213(AP008931|pid:none) Rhodococcus erythropolis PR4 pla... 67 5e-10
CP000117_2838(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 66 7e-10
CP001038_141(CP001038|pid:none) Nostoc punctiforme PCC 73102 pla... 66 7e-10
AP009552_3821(AP009552|pid:none) Microcystis aeruginosa NIES-843... 66 7e-10
CP001037_148(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 66 9e-10
CP001037_139(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 66 9e-10
CP000117_5003(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 65 1e-09
CP000839_184(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 65 1e-09
CP000473_5641(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 65 1e-09
AM502254_85(AM502254|pid:none) Leishmania infantum chromosome 36. 65 1e-09
AL939118_27(AL939118|pid:none) Streptomyces coelicolor A3(2) com... 65 1e-09
DQ311233_1(DQ311233|pid:none) Bombyx mori WD repeat domain 61 mR... 65 1e-09
CP001037_6067(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 65 2e-09
AM778957_201(AM778957|pid:none) Microcystis aeruginosa PCC 7806 ... 65 2e-09
CP000828_160(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 65 2e-09
AD1842(AD1842) WD-40 repeat protein [imported] - Nostoc sp. (str... 65 2e-09
AM494972_271(AM494972|pid:none) Leishmania braziliensis chromoso... 65 2e-09
AE1810(AE1810) WD-40 repeat protein [imported] - Nostoc sp. (str... 65 2e-09
(Q5M7T1) RecName: Full=Protein CIAO1; AltName: Full=WD repeat-co... 64 3e-09
AM746676_4558(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 64 3e-09
CP001344_497(CP001344|pid:none) Cyanothece sp. PCC 7425, complet... 64 3e-09
AP007175_253(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 64 3e-09
AK315688_1(AK315688|pid:none) Homo sapiens cDNA, FLJ96786. 64 4e-09
BC110877_1(BC110877|pid:none) Homo sapiens WD repeat domain 51A,... 64 4e-09
BC119693_1(BC119693|pid:none) Homo sapiens WD repeat domain 51A,... 64 4e-09
(Q99KN2) RecName: Full=Protein CIAO1; AltName: Full=WD repeat-co... 63 6e-09
AK075289_1(AK075289|pid:none) Homo sapiens cDNA FLJ90808 fis, cl... 63 6e-09
AC1842(AC1842) WD-40 repeat protein [imported] - Nostoc sp. (str... 63 6e-09
(P74442) RecName: Full=Uncharacterized WD repeat-containing prot... 63 8e-09
AG2400(AG2400) WD-repeat protein [imported] - Nostoc sp. (strain... 63 8e-09
CP000828_167(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 63 8e-09
CP000117_2617(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 63 8e-09
AK002314_1(AK002314|pid:none) Mus musculus adult male kidney cDN... 62 1e-08
CP000117_2804(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 62 1e-08
(Q55563) RecName: Full=Uncharacterized WD repeat-containing prot... 62 1e-08
CP000117_2100(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 62 1e-08
AP004312_39(AP004312|pid:none) Synechocystis sp. PCC 6803 plasmi... 62 1e-08
CP000828_5338(CP000828|pid:none) Acaryochloris marina MBIC11017,... 62 1e-08
(Q8YTC2) RecName: Full=Uncharacterized WD repeat-containing prot... 62 1e-08
T02617(T02617;A84656)hypothetical protein At2g26060 [imported] -... 62 2e-08
AE017350_307(AE017350|pid:none) Cryptococcus neoformans var. neo... 62 2e-08
CP001291_1208(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 62 2e-08
CP000839_311(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 62 2e-08
AP009552_6258(AP009552|pid:none) Microcystis aeruginosa NIES-843... 62 2e-08
(Q55AR8) RecName: Full=U5 small nuclear ribonucleoprotein 40 kDa... 62 2e-08
CP000854_3359(CP000854|pid:none) Mycobacterium marinum M, comple... 62 2e-08
AC004747_11(AC004747|pid:none) Arabidopsis thaliana chromosome 2... 62 2e-08
CR940352_182(CR940352|pid:none) Theileria annulata strain Ankara... 61 2e-08
BC056099_1(BC056099|pid:none) Xenopus laevis hypothetical protei... 61 2e-08
CP001291_2528(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 61 2e-08
CP000820_6355(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 61 2e-08
AK315568_1(AK315568|pid:none) Homo sapiens cDNA, FLJ96640, highl... 61 3e-08
(Q8W1K8) RecName: Full=Protein Mut11; AltName: Full=Mut11p; &AF... 61 3e-08
CP000828_4370(CP000828|pid:none) Acaryochloris marina MBIC11017,... 61 3e-08
CR405685_1(CR405685|pid:none) Zebrafish DNA sequence from clone ... 61 3e-08
AC117072_4(AC117072|pid:none) Dictyostelium discoideum chromosom... 61 3e-08
CP001037_5630(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 60 4e-08
CP000117_1538(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 60 4e-08
CP001291_5177(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 60 4e-08
CP000845_57(CP000845|pid:none) Acaryochloris marina MBIC11017 pl... 60 4e-08
FN314118_1(FN314118|pid:none) Schistosoma japonicum isolate Anhu... 60 5e-08
BA000045_4356(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 60 5e-08
AK342470_1(AK342470|pid:none) Acyrthosiphon pisum ACYPI008815 mR... 60 5e-08
CP000119_130(CP000119|pid:none) Anabaena variabilis ATCC 29413 p... 60 5e-08
CP001099_1375(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,... 60 5e-08
BT072537_1(BT072537|pid:none) Salmo salar clone ssal-rgf-529-231... 60 5e-08
CU928170_698(CU928170|pid:none) Kluyveromyces thermotolerans str... 60 5e-08
(Q00808) RecName: Full=Vegetative incompatibility protein HET-E-... 60 6e-08
CP001013_1798(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 60 6e-08
AF323582_1(AF323582|pid:none) Podospora anserina beta transducin... 60 6e-08
AP009552_1750(AP009552|pid:none) Microcystis aeruginosa NIES-843... 60 6e-08
CP000393_3435(CP000393|pid:none) Trichodesmium erythraeum IMS101... 60 6e-08
AM746676_2689(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 60 6e-08
(Q2TBP4) RecName: Full=WD repeat-containing protein 51A; &BC109... 60 6e-08
AF323584_1(AF323584|pid:none) Podospora anserina beta transducin... 60 6e-08
AL078635_13(AL078635|pid:none) Amycolatopsis orientalis cosmid p... 59 8e-08
CP000828_4622(CP000828|pid:none) Acaryochloris marina MBIC11017,... 59 8e-08
AP007169_166(AP007169|pid:none) Aspergillus oryzae RIB40 genomic... 59 8e-08
CP001037_1432(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 59 8e-08
BC051783_1(BC051783|pid:none) Danio rerio small nuclear ribonucl... 59 1e-07
AE2490(AE2490) WD-repeat protein [imported] - Nostoc sp. (strain... 59 1e-07
FM992695_823(FM992695|pid:none) Candida dubliniensis CD36 chromo... 59 1e-07
CP000828_5196(CP000828|pid:none) Acaryochloris marina MBIC11017,... 59 1e-07
CP000820_5763(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 59 1e-07
CP000844_164(CP000844|pid:none) Acaryochloris marina MBIC11017 p... 59 1e-07
BC168104_1(BC168104|pid:none) Xenopus tropicalis cDNA clone MGC:... 59 1e-07
CT573213_1205(CT573213|pid:none) Frankia alni str. ACN14A chromo... 59 1e-07
AY812578_1(AY812578|pid:none) Schistosoma japonicum SJCHGC09556 ... 59 1e-07
CU074274_1(CU074274|pid:none) Podospora anserina genomic DNA, NW... 59 1e-07
AF1890(AF1890) WD-repeat protein [imported] - Nostoc sp. (strain... 59 1e-07
BA000045_1965(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 59 1e-07
CP001331_341(CP001331|pid:none) Micromonas sp. RCC299 chromosome... 58 2e-07
CP000117_4826(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 58 2e-07
(P49695) RecName: Full=Probable serine/threonine-protein kinase ... 58 2e-07
CP000099_2768(CP000099|pid:none) Methanosarcina barkeri str. Fus... 58 2e-07
CP000686_859(CP000686|pid:none) Roseiflexus sp. RS-1, complete g... 58 2e-07
CP001131_3502(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 58 2e-07
AK170853_1(AK170853|pid:none) Mus musculus NOD-derived CD11c +ve... 58 2e-07
CP000806_3920(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 58 2e-07
CP001359_3569(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 58 2e-07
CP000117_2488(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 58 2e-07
CP000249_314(CP000249|pid:none) Frankia sp. CcI3, complete genome. 58 2e-07
CP000393_1374(CP000393|pid:none) Trichodesmium erythraeum IMS101... 58 2e-07
BA000045_2244(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 58 2e-07
CP000393_3924(CP000393|pid:none) Trichodesmium erythraeum IMS101... 58 2e-07
(Q55DA2) RecName: Full=Protein CIAO1 homolog; 58 2e-07
CR812943_6(CR812943|pid:none) Zebrafish DNA sequence from clone ... 58 2e-07
AL832918_1(AL832918|pid:none) Homo sapiens mRNA; cDNA DKFZp762M0... 58 2e-07
CP001037_4818(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 58 2e-07
BC045888_1(BC045888|pid:none) Danio rerio WD repeat domain 51A, ... 58 2e-07
CP001037_1947(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 58 2e-07
CU074270_1(CU074270|pid:none) Podospora anserina genomic DNA, NW... 58 2e-07
CP001291_699(CP001291|pid:none) Cyanothece sp. PCC 7424, complet... 58 2e-07
CT573213_3533(CT573213|pid:none) Frankia alni str. ACN14A chromo... 58 2e-07
AM746676_4559(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 58 2e-07
CP001287_548(CP001287|pid:none) Cyanothece sp. PCC 8801, complet... 58 2e-07
BT045543_1(BT045543|pid:none) Salmo salar clone ssal-rgf-524-224... 57 3e-07
CP000499_331(CP000499|pid:none) Pichia stipitis CBS 6054 chromos... 57 3e-07
AP007175_262(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 57 3e-07
CP001037_5275(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 57 3e-07
CT573213_3638(CT573213|pid:none) Frankia alni str. ACN14A chromo... 57 3e-07
S33263(S33263;S45729;A54593)transcription initiation factor IID-... 57 3e-07
AL603745_5(AL603745|pid:none) Mouse DNA sequence from clone RP23... 57 3e-07
AJ628149_32(AJ628149|pid:none) Micromonospora echinospora genomi... 57 3e-07
CP000393_2802(CP000393|pid:none) Trichodesmium erythraeum IMS101... 57 3e-07
AJ012588_1(AJ012588|pid:none) Drosophila melanogaster mRNA for N... 57 3e-07
AE014134_131(AE014134|pid:none) Drosophila melanogaster chromoso... 57 3e-07
(P93107) RecName: Full=Flagellar WD repeat-containing protein Pf... 57 3e-07
(P49846) RecName: Full=Transcription initiation factor TFIID sub... 57 3e-07
CP001100_2468(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 57 3e-07
CP000251_3439(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 57 3e-07
AH2195(AH2195) hypothetical protein alr3119 [imported] - Nostoc ... 57 3e-07
AP007151_34(AP007151|pid:none) Aspergillus oryzae RIB40 genomic ... 57 3e-07
AF323583_1(AF323583|pid:none) Podospora anserina beta transducin... 57 3e-07
CP001287_2282(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 57 3e-07
AC004165_19(AC004165|pid:none) Arabidopsis thaliana chromosome 2... 57 4e-07
BC044710_1(BC044710|pid:none) Xenopus laevis Notchless gene homo... 57 4e-07
AM462218_2(AM462218|pid:none) Vitis vinifera contig VV78X125617.... 57 4e-07
AK154163_1(AK154163|pid:none) Mus musculus NOD-derived CD11c +ve... 57 4e-07
CT573213_677(CT573213|pid:none) Frankia alni str. ACN14A chromos... 57 4e-07
AC010676_3(AC010676|pid:none) Arabidopsis thaliana chromosome II... 57 4e-07
(Q8VEJ4) RecName: Full=Notchless protein homolog 1; &BC018399_1... 57 4e-07
CP000393_3212(CP000393|pid:none) Trichodesmium erythraeum IMS101... 57 4e-07
BC075548_1(BC075548|pid:none) Xenopus tropicalis MGC89488 protei... 57 4e-07
(Q9D7H2) RecName: Full=WD repeat-containing protein 5B; &AK0092... 57 4e-07
AK011064_1(AK011064|pid:none) Mus musculus 13 days embryo liver ... 57 4e-07
(Q803D2) RecName: Full=Lissencephaly-1 homolog B; &BC044530_1(B... 57 4e-07
(Q5M786) RecName: Full=WD repeat-containing protein 5; &BC08100... 57 5e-07
AM746676_8405(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 57 5e-07
AJ011376_1(AJ011376|pid:none) Homo sapiens mRNA for hypothetical... 57 5e-07
CP000393_4367(CP000393|pid:none) Trichodesmium erythraeum IMS101... 57 5e-07
(Q9NVX2) RecName: Full=Notchless protein homolog 1; &AK001320_1... 57 5e-07
BA000045_725(BA000045|pid:none) Gloeobacter violaceus PCC 7421 D... 57 5e-07
(Q2KIG2) RecName: Full=WD repeat-containing protein 5; &BC11265... 57 5e-07
BC002884_1(BC002884|pid:none) Homo sapiens notchless homolog 1 (... 57 5e-07
(Q90ZL4) RecName: Full=Lissencephaly-1 homolog B; &AY032881_1(A... 57 5e-07
AK144091_1(AK144091|pid:none) Mus musculus RCB-0559 K-1 . F1 cDN... 57 5e-07
BC052124_1(BC052124|pid:none) Danio rerio WD repeat domain 5, mR... 57 5e-07
CP000117_4784(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 57 5e-07
AM269969_6(AM269969|pid:none) Aspergillus niger contig An01c0220... 57 5e-07
(Q58D20) RecName: Full=Notchless protein homolog 1; 56 7e-07
BC077844_1(BC077844|pid:none) Xenopus laevis WD repeat domain 5,... 56 7e-07
CP001576_177(CP001576|pid:none) Micromonas sp. RCC299 chromosome... 56 7e-07
U21322_7(U21322|pid:none) Caenorhabditis elegans cosmid K10D2, c... 56 7e-07
(Q09589) RecName: Full=Protein HIRA homolog; &U21322_6(U21322|p... 56 7e-07
BT021777_1(BT021777|pid:none) Bos taurus Notchless gene homolog ... 56 7e-07
BC045034_1(BC045034|pid:none) Xenopus laevis U5 snRNP-specific 4... 56 7e-07
(Q6P0D9) RecName: Full=Protein CIAO1; AltName: Full=WD repeat-co... 56 9e-07
AI2493(AI2493) WD-repeat protein [imported] - Nostoc sp. (strain... 56 9e-07
CP001337_1308(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 56 9e-07
BA000012_2184(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 56 9e-07
(Q6BIR7) RecName: Full=Protein HIR2; 56 9e-07
AJ575934_4(AJ575934|pid:none) Micromonospora purpurea DOS biosyn... 56 9e-07
CR382139_363(CR382139|pid:none) Debaryomyces hansenii strain CBS... 56 9e-07
CU928175_464(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 56 9e-07
AM494961_234(AM494961|pid:none) Leishmania braziliensis chromoso... 56 9e-07
AM270328_15(AM270328|pid:none) Aspergillus niger contig An15c001... 56 9e-07
CP000119_93(CP000119|pid:none) Anabaena variabilis ATCC 29413 pl... 56 9e-07
AH2154(AH2154) WD-repeat protein [imported] - Nostoc sp. (strain... 56 9e-07
BC161681_1(BC161681|pid:none) Xenopus laevis TBP-associated fact... 56 9e-07
AM910992_319(AM910992|pid:none) Plasmodium knowlesi strain H chr... 55 1e-06
AM920437_2228(AM920437|pid:none) Penicillium chrysogenum Wiscons... 55 1e-06
(Q91WQ5) RecName: Full=TAF5-like RNA polymerase II p300/CBP-asso... 55 1e-06
CP000117_2178(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 55 1e-06
CP000839_340(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 55 1e-06
CP000393_1925(CP000393|pid:none) Trichodesmium erythraeum IMS101... 55 1e-06
AE014296_2405(AE014296|pid:none) Drosophila melanogaster chromos... 55 1e-06
CP000828_5861(CP000828|pid:none) Acaryochloris marina MBIC11017,... 55 1e-06
AE010299_2454(AE010299|pid:none) Methanosarcina acetivorans str.... 55 1e-06
AF323585_1(AF323585|pid:none) Podospora anserina beta transducin... 55 1e-06
BT045765_1(BT045765|pid:none) Salmo salar clone ssal-rgf-530-312... 55 1e-06
(Q75AV4) RecName: Full=Polyadenylation factor subunit 2; &AE016... 55 1e-06
BC160901_1(BC160901|pid:none) Rattus norvegicus TAF5-like RNA po... 55 1e-06
AY648770_1(AY648770|pid:none) Danio rerio FLJ11294-like mRNA, pa... 55 1e-06
CP000230_1281(CP000230|pid:none) Rhodospirillum rubrum ATCC 1117... 55 2e-06
S36113(S36113)LIS-1 protein - human 55 2e-06
AK147793_1(AK147793|pid:none) Mus musculus melanocyte cDNA, RIKE... 55 2e-06
(P43034) RecName: Full=Platelet-activating factor acetylhydrolas... 55 2e-06
(Q9GL51) RecName: Full=Platelet-activating factor acetylhydrolas... 55 2e-06
CU633895_374(CU633895|pid:none) Podospora anserina genomic DNA c... 55 2e-06
AK147309_1(AK147309|pid:none) Mus musculus adult male brain UNDE... 55 2e-06
(P43033) RecName: Full=Platelet-activating factor acetylhydrolas... 55 2e-06
BC095217_1(BC095217|pid:none) Danio rerio zgc:110281, mRNA (cDNA... 55 2e-06
CP000820_6636(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 55 2e-06
CP001344_1358(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 55 2e-06
(O75529) RecName: Full=TAF5-like RNA polymerase II p300/CBP-asso... 55 2e-06
AP007164_19(AP007164|pid:none) Aspergillus oryzae RIB40 genomic ... 55 2e-06
AJ009770_1(AJ009770|pid:none) Homo sapiens mRNA for putative tra... 55 2e-06
CP001101_2134(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 55 2e-06
CP001287_904(CP001287|pid:none) Cyanothece sp. PCC 8801, complet... 55 2e-06
AX135807_1(AX135807|pid:none) Sequence 1 from Patent WO0132614. 55 2e-06
AE016818_101(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 55 2e-06
BT079708_1(BT079708|pid:none) Esox lucius clone eluc-evq-516-111... 55 2e-06
CU928176_40(CU928176|pid:none) Zygosaccharomyces rouxii strain C... 55 2e-06
CU633438_612(CU633438|pid:none) Podospora anserina genomic DNA c... 55 2e-06
AK167824_1(AK167824|pid:none) Mus musculus CRL-1722 L5178Y-R cDN... 55 2e-06
CP001037_1914(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 55 2e-06
(Q9PTR5) RecName: Full=Platelet-activating factor acetylhydrolas... 55 2e-06
BC167995_1(BC167995|pid:none) Xenopus tropicalis hypothetical pr... 55 2e-06
CR382137_103(CR382137|pid:none) Debaryomyces hansenii strain CBS... 55 2e-06
BA000045_4351(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 55 2e-06
AL596139_5(AL596139|pid:none) BAC A of library A from Tetraodon ... 54 3e-06
AP007151_775(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 54 3e-06
AC133571_4(AC133571|pid:none) Medicago truncatula clone mth2-10h... 54 3e-06
BT086255_1(BT086255|pid:none) Zea mays full-length cDNA clone ZM... 54 3e-06
AK109741_1(AK109741|pid:none) Oryza sativa Japonica Group cDNA c... 54 3e-06
(Q5REG7) RecName: Full=Platelet-activating factor acetylhydrolas... 54 3e-06
AY087647_1(AY087647|pid:none) Arabidopsis thaliana clone 37331 m... 54 3e-06
AF116463_7(AF116463|pid:none) Streptomyces lincolnensis putative... 54 3e-06
AY316746_172(AY316746|pid:none) Rhizobium sp. NGR234 megaplasmid... 54 3e-06
AK002149_1(AK002149|pid:none) Homo sapiens cDNA FLJ11287 fis, cl... 54 3e-06
CP001037_6(CP001037|pid:none) Nostoc punctiforme PCC 73102, comp... 54 3e-06
BC136340_1(BC136340|pid:none) Homo sapiens TAF5 RNA polymerase I... 54 4e-06
BT075125_1(BT075125|pid:none) Osmerus mordax clone omor-eva-518-... 54 4e-06
AP008213_479(AP008213|pid:none) Oryza sativa (japonica cultivar-... 54 4e-06
U75309_1(U75309|pid:none) Human TBP-associated factor (hTAFII100... 54 4e-06
BC052268_1(BC052268|pid:none) Homo sapiens TAF5 RNA polymerase I... 54 4e-06
AY463620_1(AY463620|pid:none) Arabidopsis thaliana TAF5 (At5g251... 54 4e-06
(Q15542) RecName: Full=Transcription initiation factor TFIID sub... 54 4e-06
(Q5RE95) RecName: Full=WD repeat-containing protein 5B; &CR8576... 54 4e-06
AP009552_5491(AP009552|pid:none) Microcystis aeruginosa NIES-843... 54 4e-06
AP009552_1527(AP009552|pid:none) Microcystis aeruginosa NIES-843... 54 4e-06
AE014297_1106(AE014297|pid:none) Drosophila melanogaster chromos... 54 4e-06
AP003517_26(AP003517|pid:none) Oryza sativa Japonica Group genom... 54 4e-06
CP000501_12(CP000501|pid:none) Pichia stipitis CBS 6054 chromoso... 54 5e-06
CR382125_948(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 54 5e-06
AP007151_1414(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 54 5e-06
AY339886_1(AY339886|pid:none) Crassostrea gigas WD40 protein Cia... 54 5e-06
BT078628_1(BT078628|pid:none) Lepeophtheirus salmonis Pacific fo... 54 5e-06
AK088953_1(AK088953|pid:none) Mus musculus 2 days neonate thymus... 54 5e-06
AM459063_1(AM459063|pid:none) Vitis vinifera contig VV78X114756.... 54 5e-06
CP001037_1497(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 54 5e-06
(Q9FLX9) RecName: Full=Notchless protein homolog; &AB009055_3(A... 54 5e-06
AM778958_177(AM778958|pid:none) Microcystis aeruginosa PCC 7806 ... 54 5e-06
AB174186_1(AB174186|pid:none) Macaca fascicularis brain cDNA clo... 54 5e-06
BC156180_1(BC156180|pid:none) Synthetic construct Mus musculus c... 54 5e-06
AP009493_3398(AP009493|pid:none) Streptomyces griseus subsp. gri... 54 5e-06
FN323611_1(FN323611|pid:none) Schistosoma japonicum isolate Anhu... 54 5e-06
(B5DG67) RecName: Full=Ribosome biogenesis protein wdr12; AltNam... 54 5e-06
AM778942_51(AM778942|pid:none) Microcystis aeruginosa PCC 7806 g... 53 6e-06
FM992691_442(FM992691|pid:none) Candida dubliniensis CD36 chromo... 53 6e-06
BT074059_1(BT074059|pid:none) Oncorhynchus mykiss clone omyk-evo... 53 6e-06
DQ647383_1(DQ647383|pid:none) Chlamydomonas reinhardtii lissence... 53 6e-06
FM992692_252(FM992692|pid:none) Candida dubliniensis CD36 chromo... 53 6e-06
BC140553_1(BC140553|pid:none) Bos taurus striatin, calmodulin bi... 53 6e-06
EF083131_1(EF083131|pid:none) Picea sitchensis clone WS02722_J02... 53 8e-06
AK290962_1(AK290962|pid:none) Homo sapiens cDNA FLJ76168 complet... 53 8e-06
BT047461_1(BT047461|pid:none) Salmo salar clone ssal-rgb2-603-17... 53 8e-06
(Q26544) RecName: Full=WD repeat-containing protein SL1-17; &U3... 53 8e-06
AJ719544_1(AJ719544|pid:none) Gallus gallus mRNA for hypothetica... 53 8e-06
FN357417_32(FN357417|pid:none) Schistosoma mansoni genome sequen... 53 8e-06
(Q13033) RecName: Full=Striatin-3; AltName: Full=Cell-cycle auto... 53 8e-06
AK290229_1(AK290229|pid:none) Homo sapiens cDNA FLJ77970 complet... 53 8e-06
DQ147949_1(DQ147949|pid:none) Macaca mulatta clone dl1_d21_t7_05... 53 8e-06
AK304508_1(AK304508|pid:none) Homo sapiens cDNA FLJ57449 complet... 53 8e-06
JC2522(JC2522) nuclear autoantigen - human &U17989_1(U17989|pid... 53 8e-06
(Q6PE01) RecName: Full=U5 small nuclear ribonucleoprotein 40 kDa... 53 8e-06
BC032708_1(BC032708|pid:none) Homo sapiens transducin (beta)-lik... 53 8e-06
CP000807_36(CP000807|pid:none) Cyanothece sp. ATCC 51142 linear ... 53 8e-06
AK030547_1(AK030547|pid:none) Mus musculus adult male pituitary ... 52 1e-05
(Q6CP71) RecName: Full=Polyadenylation factor subunit 2; &CR382... 52 1e-05
AK031937_1(AK031937|pid:none) Mus musculus adult male medulla ob... 52 1e-05
(Q9QXE7) RecName: Full=F-box-like/WD repeat-containing protein T... 52 1e-05
AC117075_70(AC117075|pid:none) Dictyostelium discoideum chromoso... 52 1e-05
AM920435_11(AM920435|pid:none) Penicillium chrysogenum Wisconsin... 52 1e-05
(Q5KKY3) RecName: Full=Polyadenylation factor subunit 2; &AE017... 52 1e-05
BC108505_1(BC108505|pid:none) Xenopus laevis hypothetical protei... 52 1e-05
CP001576_437(CP001576|pid:none) Micromonas sp. RCC299 chromosome... 52 1e-05
CP000820_3699(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 52 1e-05
AM502242_165(AM502242|pid:none) Leishmania infantum chromosome 24. 52 1e-05
(Q8C092) RecName: Full=Transcription initiation factor TFIID sub... 52 1e-05
BC075582_1(BC075582|pid:none) Xenopus tropicalis TAF5-like RNA p... 52 1e-05
AM989989_35(AM989989|pid:none) Zygosaccharomyces rouxii strain C... 52 1e-05
L25109_1(L25109|pid:none) Mus musculus LIS mRNA, partial cds. 52 1e-05
CP000593_9(CP000593|pid:none) Ostreococcus lucimarinus CCE9901 c... 52 1e-05
BC138055_1(BC138055|pid:none) Mus musculus striatin, calmodulin ... 52 1e-05
CP000820_3668(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 52 1e-05
(P58405) RecName: Full=Striatin-3; AltName: Full=Cell-cycle auto... 52 1e-05
AM270071_11(AM270071|pid:none) Aspergillus niger contig An04c010... 52 1e-05
CP001337_2947(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 52 1e-05
AY814886_1(AY814886|pid:none) Schistosoma japonicum SJCHGC06281 ... 52 1e-05
(Q9ERG2) RecName: Full=Striatin-3; AltName: Full=Cell-cycle auto... 52 1e-05
CP000828_5917(CP000828|pid:none) Acaryochloris marina MBIC11017,... 52 1e-05
AY223226_1(AY223226|pid:none) Schistosoma japonicum clone ZZD323... 52 1e-05
AJ719967_1(AJ719967|pid:none) Gallus gallus mRNA for hypothetica... 52 1e-05
AY428810_1(AY428810|pid:none) Solanum chacoense notchless-like p... 52 1e-05
BT012225_1(BT012225|pid:none) Arabidopsis thaliana At5g13480 gen... 52 1e-05
CP001577_363(CP001577|pid:none) Micromonas sp. RCC299 chromosome... 52 1e-05
AM424753_1(AM424753|pid:none) Vitis vinifera contig VV78X110804.... 52 2e-05
(Q9BZK7) RecName: Full=F-box-like/WD repeat-containing protein T... 52 2e-05
(Q7SZM9) RecName: Full=F-box-like/WD repeat-containing protein T... 52 2e-05
AF268195_1(AF268195|pid:none) Mus musculus strain BALB/c IRA1 mR... 52 2e-05
CT573213_1700(CT573213|pid:none) Frankia alni str. ACN14A chromo... 52 2e-05
FN313599_1(FN313599|pid:none) Schistosoma japonicum isolate Anhu... 52 2e-05
AK036064_1(AK036064|pid:none) Mus musculus 16 days neonate cereb... 52 2e-05
(Q9NDC9) RecName: Full=Lissencephaly-1 homolog; AltName: Full=Pr... 52 2e-05
FJ527023_1(FJ527023|pid:none) Macaca mulatta transducin (beta)-l... 52 2e-05
(Q96WV5) RecName: Full=Putative coatomer subunit alpha; AltName:... 52 2e-05
(Q8BHJ5) RecName: Full=F-box-like/WD repeat-containing protein T... 52 2e-05
AK022956_1(AK022956|pid:none) Homo sapiens cDNA FLJ12894 fis, cl... 52 2e-05
CP000820_1110(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 52 2e-05
CP001329_616(CP001329|pid:none) Micromonas sp. RCC299 chromosome... 52 2e-05
FJ195366_9(FJ195366|pid:none) Bos taurus Y-linked ubiquitin-spec... 52 2e-05
CR940353_254(CR940353|pid:none) Theileria annulata strain Ankara... 52 2e-05
CP001108_1939(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 52 2e-05
BC123966_1(BC123966|pid:none) Xenopus tropicalis transducin (bet... 52 2e-05
CP000828_1004(CP000828|pid:none) Acaryochloris marina MBIC11017,... 51 2e-05
S62544(S62544;T37588)hypothetical protein SPAC12G12.13c - fissio... 51 2e-05
AM467026_1(AM467026|pid:none) Vitis vinifera contig VV78X101970.... 51 2e-05
Z71177_1(Z71177|pid:none) Caenorhabditis elegans Cosmid AC3, com... 51 2e-05
CU074316_1(CU074316|pid:none) Podospora anserina genomic DNA, NW... 51 2e-05
BC161057_1(BC161057|pid:none) Xenopus tropicalis hypothetical pr... 51 2e-05
AE016816_295(AE016816|pid:none) Ashbya gossypii (= Eremothecium ... 51 2e-05
AX135809_1(AX135809|pid:none) Sequence 3 from Patent WO0132614. 51 2e-05
CP001291_2539(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 51 2e-05
BT055753_1(BT055753|pid:none) Zea mays full-length cDNA clone ZM... 51 2e-05
(O43017) RecName: Full=Set1 complex component swd3; Sho... 51 2e-05
AK303253_1(AK303253|pid:none) Homo sapiens cDNA FLJ58655 complet... 51 2e-05
CU640366_848(CU640366|pid:none) Podospora anserina genomic DNA c... 51 2e-05
CR382135_388(CR382135|pid:none) Debaryomyces hansenii strain CBS... 51 2e-05
CP001099_247(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, ... 51 2e-05
EU969680_1(EU969680|pid:none) Zea mays clone 333954 WD-repeat pr... 51 3e-05
BT037560_1(BT037560|pid:none) Zea mays full-length cDNA clone ZM... 51 3e-05
(Q17963) RecName: Full=WD repeat-containing protein tag-125; &T... 51 3e-05
CP001344_3209(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 51 3e-05
CP001344_1900(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 51 3e-05
CP000820_515(CP000820|pid:none) Frankia sp. EAN1pec, complete ge... 51 3e-05
AP005063_13(AP005063|pid:none) Oryza sativa Japonica Group genom... 51 3e-05
AM778874_8(AM778874|pid:none) Microcystis aeruginosa PCC 7806 ge... 51 3e-05
BA000045_2888(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 51 3e-05
FN317177_1(FN317177|pid:none) Schistosoma japonicum isolate Anhu... 51 3e-05
AB007645_4(AB007645|pid:none) Arabidopsis thaliana genomic DNA, ... 51 3e-05
(Q6FJS0) RecName: Full=Polyadenylation factor subunit 2; &CR380... 51 3e-05
AF098070_1(AF098070|pid:none) Drosophila melanogaster Lis1 homol... 51 3e-05
(Q7KNS3) RecName: Full=Lissencephaly-1 homolog; Short=L... 51 3e-05
CU928165_28(CU928165|pid:none) Kluyveromyces thermotolerans stra... 51 3e-05
CP000393_2151(CP000393|pid:none) Trichodesmium erythraeum IMS101... 50 4e-05
CT005267_42(CT005267|pid:none) Leishmania major strain Friedlin,... 50 4e-05
AY174059_1(AY174059|pid:none) Plasmodium falciparum activated pr... 50 4e-05
(Q5JTN6) RecName: Full=WD repeat-containing protein 38; &AL3549... 50 4e-05
AL929242_3(AL929242|pid:none) Mouse DNA sequence from clone RP23... 50 4e-05
EU954724_1(EU954724|pid:none) Zea mays clone 1479275 WD-repeat p... 50 4e-05
BT064699_1(BT064699|pid:none) Zea mays full-length cDNA clone ZM... 50 4e-05
CP000828_3726(CP000828|pid:none) Acaryochloris marina MBIC11017,... 50 4e-05
BT037412_1(BT037412|pid:none) Zea mays full-length cDNA clone ZM... 50 4e-05
AL772282_6(AL772282|pid:none) Mouse DNA sequence from clone RP23... 50 4e-05
EU961763_1(EU961763|pid:none) Zea mays clone 238133 unknown mRNA. 50 4e-05
FN357545_14(FN357545|pid:none) Schistosoma mansoni genome sequen... 50 4e-05
(Q9D0I6) RecName: Full=WD repeat, SAM and U-box domain-containin... 50 4e-05
EF100190_37(EF100190|pid:none) Uncultured marine bacterium HF10_... 50 4e-05
AE014297_4572(AE014297|pid:none) Drosophila melanogaster chromos... 50 5e-05
CP000828_2422(CP000828|pid:none) Acaryochloris marina MBIC11017,... 50 5e-05
FN319243_1(FN319243|pid:none) Schistosoma japonicum isolate Anhu... 50 5e-05
FN357585_7(FN357585|pid:none) Schistosoma mansoni genome sequenc... 50 5e-05
FJ532265_1(FJ532265|pid:none) Gorilla gorilla isolate PR00573 tr... 50 5e-05
CR382136_675(CR382136|pid:none) Debaryomyces hansenii strain CBS... 50 5e-05
AM502253_397(AM502253|pid:none) Leishmania infantum chromosome 35. 50 5e-05
BT039400_1(BT039400|pid:none) Zea mays full-length cDNA clone ZM... 50 5e-05
FM992688_6(FM992688|pid:none) Candida dubliniensis CD36 chromoso... 50 5e-05
CP000828_3398(CP000828|pid:none) Acaryochloris marina MBIC11017,... 50 5e-05
FN319242_1(FN319242|pid:none) Schistosoma japonicum isolate Anhu... 50 5e-05
CP000879_1084(CP000879|pid:none) Petrotoga mobilis SJ95, complet... 50 5e-05
BT065792_1(BT065792|pid:none) Zea mays full-length cDNA clone ZM... 50 5e-05
AB264261_1(AB264261|pid:none) Thujopsis dolabrata CC2196 gene fo... 50 5e-05
(Q9UTC7) RecName: Full=Uncharacterized WD repeat-containing prot... 50 5e-05
AC153125_19(AC153125|pid:none) Medicago truncatula clone mth2-74... 50 5e-05
AM238664_1098(AM238664|pid:none) Streptomyces ambofaciens ATCC 2... 50 5e-05
AF083383_1(AF083383|pid:none) Homo sapiens 38kDa splicing factor... 50 5e-05
L13387_1(L13387|pid:none) Homo sapiens (clone 6-1) Miller-Dieker... 50 5e-05
DQ132809_1(DQ132809|pid:none) Oryza sativa (japonica cultivar-gr... 50 5e-05
AB264266_1(AB264266|pid:none) Chamaecyparis obtusa CC2196 gene f... 50 5e-05
CU928175_123(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 50 7e-05
AY547291_1(AY547291|pid:none) Toxoplasma gondii receptor for act... 50 7e-05
CR954213_14(CR954213|pid:none) Ostreococcus tauri strain OTTH059... 50 7e-05
AL844509_291(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 50 7e-05
(Q9BQ87) RecName: Full=F-box-like/WD repeat-containing protein T... 50 7e-05
AK111786_1(AK111786|pid:none) Oryza sativa Japonica Group cDNA c... 50 7e-05
AF106576_4(AF106576|pid:none) Caenorhabditis elegans cosmid W07E... 50 7e-05
EU315009_1(EU315009|pid:none) Carassius auratus S/G2 nuclear aut... 50 7e-05
BC056720_1(BC056720|pid:none) Danio rerio PRP4 pre-mRNA processi... 50 7e-05
CP000502_174(CP000502|pid:none) Pichia stipitis CBS 6054 chromos... 50 7e-05
AM424504_2(AM424504|pid:none) Vitis vinifera contig VV78X154848.... 50 7e-05

>(Q5R1S9) RecName: Full=Chromatin assembly factor 1 subunit B;
Short=CAF-1 subunit B; AltName: Full=Chromatin
assembly factor I p60 subunit; Short=CAF-I 60
kDa subunit; Short=CAF-Ip60;
&AB195693_1(AB195693|pid:none)
Length = 566

Score = 160 bits (405), Expect = 3e-38
Identities = 78/188 (41%), Positives = 110/188 (58%), Gaps = 13/188 (6%)
Frame = +1

Query: 43 MKCETVMILWHNKDPIYSADF----DPTSNKFCTTGFDNEIKIWGYTKNKDGHLSVEFLS 210
MK T I WHNK+P+YS DF D N+ + G D +++W K DG VEFLS
Sbjct: 1 MKVITCEIAWHNKEPVYSLDFQHGTDGKINRLASAGVDTAVRVWKVEKGPDGKAIVEFLS 60

Query: 211 SLAKHVKPVNIARFSPGGNLLASGSDDGSIVIWRLNQN------AIPPSDSSM--KEIWS 366
+LA+H K VN+ RFSP G +LASG DD I++W+LN + A D + KE W+
Sbjct: 61 NLARHTKAVNVVRFSPSGEVLASGGDDAVILLWKLNDSKELEPLAFQDEDEAQLNKENWT 120

Query: 367 IVTVLR-VTTDVYDLSWSCDGQYLSTVSTDNSVSIWSPLSKTHHQLITEHSHYVQGVSWD 543
+V LR DVYD+ W+ DG Y+++ S DN+ +W + ++ EH YVQG++WD
Sbjct: 121 VVKTLRGHLEDVYDICWTSDGNYMASASVDNTAIMWDVVKGQKVSILNEHKSYVQGITWD 180

Query: 544 PLNDFMIT 567
PL ++ T
Sbjct: 181 PLGQYIAT 188

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,113,228,799
Number of extensions: 24339449
Number of successful extensions: 74864
Number of sequences better than 10.0: 2734
Number of HSP's gapped: 68243
Number of HSP's successfully gapped: 5754
Length of query: 206
Length of database: 1,051,180,864
Length adjustment: 123
Effective length of query: 83
Effective length of database: 653,084,107
Effective search space: 54205980881
Effective search space used: 54205980881
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)

PSORT

psg: 0.86 gvh: 0.36 alm: 0.45 top: 0.67 tms: 0.00 mit: 0.27 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.60 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

36.0 %: cytoplasmic
24.0 %: peroxisomal
20.0 %: mitochondrial
16.0 %: nuclear
4.0 %: cytoskeletal

>> prediction for Contig-U12617-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 1
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0