| Contig-U12612-1 |
| Contig ID |
Contig-U12612-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
693 |
| Chromosome number (1..6, M) |
2 |
| Chromosome length |
8467578 |
| Start point |
6785509 |
| End point |
6786107 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
11 |
| Number of EST |
18 |
| Link to clone list |
U12612 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.12. 2 |
| Homology vs DNA |
|
| protein update |
2009. 7. 4 |
| Homology vs Protein |
Query= Contig-U12612-1 (Contig-U12612-1Q) /CSM_Contig/Contig-U12612-1Q.Seq.d
(693 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(P46793) RecName: Full=40S ribosomal protein S15a; AltName: Full... 261 2e-68
U27539_1(U27539|pid:none) Dictyostelium discoideum 40S ribosomal... 258 2e-67
CR940348_885(CR940348|pid:none) Theileria annulata strain Ankara... 209 5e-53
AY857473_1(AY857473|pid:none) Suberites domuncula S15a mRNA, com... 203 5e-51
EF638942_1(EF638942|pid:none) Triatoma infestans clone TI-111 40... 201 1e-50
AF159546_1(AF159546|pid:none) Lapemis hardwickii ribosomal prote... 200 4e-50
BT078894_1(BT078894|pid:none) Esox lucius clone eluc-evq-531-019... 199 9e-50
AY961547_1(AY961547|pid:none) Lysiphlebus testaceipes ribosomal ... 199 9e-50
(P62244) RecName: Full=40S ribosomal protein S15a; &(P62245) Re... 199 9e-50
AK062943_1(AK062943|pid:none) Oryza sativa Japonica Group cDNA c... 198 1e-49
(Q00332) RecName: Full=40S ribosomal protein S15a; AltName: Full... 198 1e-49
DQ673387_1(DQ673387|pid:none) Diaphorina citri putative ribosoma... 198 1e-49
AM048968_1(AM048968|pid:none) Curculio glandium mRNA for ribosom... 198 1e-49
EU558343_1(EU558343|pid:none) Phoronis muelleri putative 40S rib... 198 1e-49
(Q9AT34) RecName: Full=40S ribosomal protein S15a; &AF349962_1(... 198 1e-49
AJ249788_1(AJ249788|pid:none) Xanthophyllomyces dendrorhous mRNA... 198 1e-49
AY561512_1(AY561512|pid:none) Danio rerio ribosomal protein S15a... 198 1e-49
DQ200365_1(DQ200365|pid:none) Solanum tuberosum clone 055B10 unk... 197 2e-49
S52339(S52339;S22051;S68937) ribosomal protein S15a, cytosolic [... 197 2e-49
(Q5R938) RecName: Full=40S ribosomal protein S15a; &CR859557_1(... 197 3e-49
AM442936_1(AM442936|pid:none) Vitis vinifera contig VV78X262544.... 197 3e-49
AB291569_1(AB291569|pid:none) Solea senegalensis rpS15a mRNA for... 197 3e-49
AB018560_1(AB018560|pid:none) Citrullus lanatus mRNA for wrp15a,... 197 3e-49
EF144682_1(EF144682|pid:none) Populus trichocarpa clone WS01116_... 197 3e-49
AK032522_1(AK032522|pid:none) Mus musculus adult male olfactory ... 196 6e-49
EU930283_1(EU930283|pid:none) Simulium vittatum clone SV-448 rib... 196 7e-49
DQ440038_1(DQ440038|pid:none) Aedes aegypti clone AE-277 40S rib... 196 7e-49
(Q9LX88) RecName: Full=40S ribosomal protein S15a-4; &AL355775_... 196 7e-49
AK340990_1(AK340990|pid:none) Acyrthosiphon pisum ACYPI000930 mR... 195 1e-48
DQ653048_1(DQ653048|pid:none) Arabidopsis thaliana clone 0000016... 195 1e-48
AC004218_25(AC004218|pid:none) Arabidopsis thaliana chromosome 2... 195 1e-48
EF179410_1(EF179410|pid:none) Xenopsylla cheopis clone XC-101 ri... 195 1e-48
EF070603_1(EF070603|pid:none) Maconellicoccus hirsutus clone WHM... 195 1e-48
AY769331_1(AY769331|pid:none) Bombyx mori ribosomal protein S15A... 194 2e-48
EU247160_1(EU247160|pid:none) Lycosa singoriensis clone LSsin714... 194 2e-48
AE017351_285(AE017351|pid:none) Cryptococcus neoformans var. neo... 194 2e-48
EU124940_1(EU124940|pid:none) Arenicola marina ribosomal protein... 194 2e-48
AY752833_1(AY752833|pid:none) Culicoides sonorensis clone CsRPS1... 194 3e-48
DQ848917_1(DQ848917|pid:none) Scophthalmus maximus clone sbc45 4... 194 3e-48
EU934278_1(EU934278|pid:none) TSA: Anopheles darlingi AD-240 40S... 193 4e-48
FN357554_16(FN357554|pid:none) Schistosoma mansoni genome sequen... 193 4e-48
(Q90YQ8) RecName: Full=40S ribosomal protein S15a; 193 5e-48
CU633900_887(CU633900|pid:none) Podospora anserina genomic DNA c... 193 5e-48
AY813171_1(AY813171|pid:none) Schistosoma japonicum SJCHGC05946 ... 192 6e-48
CR382132_1053(CR382132|pid:none) Yarrowia lipolytica strain CLIB... 192 8e-48
EU139183_1(EU139183|pid:none) Flustra foliacea putative 40S ribo... 192 8e-48
AY150716_1(AY150716|pid:none) Drosophila melanogaster strain LA7... 192 8e-48
EU652317_16(EU652317|pid:none) Philodina roseola GTP binding pro... 192 1e-47
X59984_1(X59984|pid:none) B.napus mRNA for ribosomal protein S15... 191 2e-47
DQ066286_1(DQ066286|pid:none) Ixodes scapularis isolate is-all-4... 190 3e-47
DQ122867_1(DQ122867|pid:none) Chlamydomonas incerta 40S ribosoma... 190 3e-47
FN316399_1(FN316399|pid:none) Schistosoma japonicum isolate Anhu... 190 3e-47
CU928168_563(CU928168|pid:none) Kluyveromyces thermotolerans str... 190 3e-47
(Q752J5) RecName: Full=40S ribosomal protein S22; &AE016818_196... 190 3e-47
(Q3E7Y3) RecName: Full=40S ribosomal protein S22-B; AltName: Ful... 189 7e-47
(P33953) RecName: Full=40S ribosomal protein S22; AltName: Full=... 189 7e-47
BT077183_1(BT077183|pid:none) Caligus rogercresseyi clone crog-e... 189 9e-47
(Q6FMW9) RecName: Full=40S ribosomal protein S22; &CR380957_195... 189 9e-47
EU652315_11(EU652315|pid:none) Adineta vaga speckle-type POZ pro... 189 9e-47
AM989975_8(AM989975|pid:none) Zygosaccharomyces rouxii strain AT... 187 2e-46
AM494968_19(AM494968|pid:none) Leishmania braziliensis chromosom... 187 3e-46
EU652316_10(EU652316|pid:none) Adineta vaga dihydrogenpyrimidine... 187 3e-46
CU928174_317(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 187 3e-46
(Q96W54) RecName: Full=40S ribosomal protein S22; &AF365406_3(A... 187 3e-46
FN392319_374(FN392319|pid:none) Pichia pastoris GS115 chromosome... 187 3e-46
FJ362375_2(FJ362375|pid:none) Caenorhabditis sp. PS1010 contig J... 186 6e-46
(P46792) RecName: Full=40S ribosomal protein S22; AltName: Full=... 186 6e-46
AF025460_7(AF025460|pid:none) Caenorhabditis elegans cosmid F53A... 186 6e-46
AM494948_99(AM494948|pid:none) Leishmania braziliensis chromosom... 186 8e-46
AY849638_1(AY849638|pid:none) Magnaporthe grisea 40S ribosomal p... 185 1e-45
FN392320_512(FN392320|pid:none) Pichia pastoris GS115 chromosome... 184 2e-45
FM992688_334(FM992688|pid:none) Candida dubliniensis CD36 chromo... 184 2e-45
AM980969_1(AM980969|pid:none) Echinorhynchus truttae partial mRN... 184 2e-45
AB089494_1(AB089494|pid:none) Giardia intestinalis gene for ribo... 178 2e-43
AB089489_1(AB089489|pid:none) Trichomonas vaginalis gene for rib... 176 8e-43
X62691_1(X62691|pid:none) H.sapiens mRNA for ribosomal protein (... 171 3e-41
CP000882_53(CP000882|pid:none) Hemiselmis andersenii chromosome ... 167 4e-40
FN323285_1(FN323285|pid:none) Schistosoma japonicum isolate Anhu... 165 1e-39
AX888010_1(AX888010|pid:none) Sequence 3873 from Patent EP1033401. 161 2e-38
AJ010592_142(AJ010592|pid:none) Guillardia theta DNA for complet... 158 1e-37
DQ158856_37(DQ158856|pid:none) Bigelowiella natans nucleomorph c... 157 3e-37
FN323306_1(FN323306|pid:none) Schistosoma japonicum isolate Anhu... 151 2e-35
FN323300_1(FN323300|pid:none) Schistosoma japonicum isolate Anhu... 149 8e-35
BT058237_1(BT058237|pid:none) Salmo salar clone Contig2456 40S r... 147 3e-34
(A8MAJ5) RecName: Full=30S ribosomal protein S8P; &CP000852_171... 131 2e-29
(A0B9V5) RecName: Full=30S ribosomal protein S8P; &CP000477_167... 129 1e-28
EU686616_30(EU686616|pid:none) Uncultured marine group II euryar... 127 3e-28
DQ223560_1(DQ223560|pid:none) Ovis aries clone TO-DOWN-I1-2 ribo... 126 5e-28
(O82205) RecName: Full=40S ribosomal protein S15a-2; &AC005169_... 126 5e-28
(A1RWS0) RecName: Full=30S ribosomal protein S8P; &CP000505_240... 126 7e-28
AL590451_135(AL590451|pid:none) chromosome IX of strain GB-M1 of... 124 3e-27
(Q8TW15) RecName: Full=30S ribosomal protein S8P; &AE009439_122... 124 4e-27
(Q0W1X3) RecName: Full=30S ribosomal protein S8P; &AM114193_636... 124 4e-27
CP001338_435(CP001338|pid:none) Candidatus Methanosphaerula palu... 123 6e-27
AM431407_3(AM431407|pid:none) Vitis vinifera contig VV78X066690.... 122 8e-27
EF082927_1(EF082927|pid:none) Picea sitchensis clone WS02910_P09... 122 1e-26
BT070473_1(BT070473|pid:none) Picea sitchensis clone WS02731_A04... 121 2e-26
BT051406_1(BT051406|pid:none) Medicago truncatula clone MTYF1_F2... 120 3e-26
EU016608_32(EU016608|pid:none) Uncultured marine microorganism H... 120 4e-26
EU686639_17(EU686639|pid:none) Uncultured marine group II euryar... 120 5e-26
(A3CT12) RecName: Full=30S ribosomal protein S8P; &CP000562_577... 119 7e-26
EU973088_1(EU973088|pid:none) Zea mays clone 393093 40S ribosoma... 119 7e-26
CP001398_1988(CP001398|pid:none) Thermococcus gammatolerans EJ3,... 119 7e-26
(B6YSM9) RecName: Full=30S ribosomal protein S8P; &CP000855_83(... 119 7e-26
(A7I5Q4) RecName: Full=30S ribosomal protein S8P; &CP000780_541... 119 9e-26
(Q97BW1) RecName: Full=30S ribosomal protein S8P; &BA000011_344... 119 9e-26
(A1RVN1) RecName: Full=30S ribosomal protein S8P; &CP000504_182... 119 1e-25
(A3DNC2) RecName: Full=30S ribosomal protein S8P; &CP000575_101... 118 1e-25
(Q9HIS2) RecName: Full=30S ribosomal protein S8P; &AL445067_27(... 118 2e-25
(B1Y8V5) RecName: Full=30S ribosomal protein S8P; &CP001014_122... 117 3e-25
EU686610_26(EU686610|pid:none) Uncultured marine group II euryar... 117 3e-25
AE000666_18(AE000666|pid:none) Methanothermobacter thermautotrop... 116 6e-25
(Q6L1B2) RecName: Full=30S ribosomal protein S8P; &AE017261_655... 115 1e-24
(Q9UX92) RecName: Full=30S ribosomal protein S8P; &AE006641_638... 115 1e-24
(A4WMD9) RecName: Full=30S ribosomal protein S8P; &CP000660_193... 115 2e-24
(Q2FSG2) RecName: Full=30S ribosomal protein S8P; &CP000254_216... 113 5e-24
(O05636) RecName: Full=30S ribosomal protein S8P; &CP000077_544... 113 5e-24
(Q8ZVW0) RecName: Full=30S ribosomal protein S8P; &AE009441_145... 113 6e-24
(A2SPL7) RecName: Full=30S ribosomal protein S8P; &CP000559_95(... 112 1e-23
AY714845_37(AY714845|pid:none) Uncultured archaeon GZfos27B6 clo... 111 2e-23
(Q977U9) RecName: Full=30S ribosomal protein S8P; &AF404829_1(A... 110 4e-23
(A4FWA6) RecName: Full=30S ribosomal protein S8P; &(Q6LXD8) Rec... 108 2e-22
(A6UWV3) RecName: Full=30S ribosomal protein S8P; &CP000743_138... 108 2e-22
DQ156348_20(DQ156348|pid:none) Uncultured marine group II euryar... 107 3e-22
CP000866_791(CP000866|pid:none) Nitrosopumilus maritimus SCM1, c... 106 6e-22
CP001365_2403(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 105 1e-21
(Q18GG4) RecName: Full=30S ribosomal protein S8P; &AM180088_189... 104 2e-21
(O28369) RecName: Full=30S ribosomal protein S8P; 104 3e-21
(Q3IMX3) RecName: Full=30S ribosomal protein S8P; &CR936257_243... 103 4e-21
G72726(G72726)probable ribosomal protein S8 APE0352 - Aeropyrum ... 103 4e-21
(Q9YF89) RecName: Full=30S ribosomal protein S8P; &BA000002_262... 103 4e-21
(A0RVY8) RecName: Full=30S ribosomal protein S8P; 101 2e-20
EU961323_1(EU961323|pid:none) Zea mays clone 234516 unknown mRNA. 100 3e-20
EU975989_1(EU975989|pid:none) Zea mays clone 507762 unknown mRNA. 97 6e-19
AE004437_1307(AE004437|pid:none) Halobacterium sp. NRC-1, comple... 87 4e-16
CR954201_237(CR954201|pid:none) Ostreococcus tauri strain OTTH05... 87 6e-16
EF083698_1(EF083698|pid:none) Picea sitchensis clone WS0293_O09 ... 82 1e-14
EU969470_1(EU969470|pid:none) Zea mays clone 330717 unknown mRNA. 76 8e-13
(B6YQ71) RecName: Full=30S ribosomal protein S8; &AP010656_80(A... 54 6e-06
CP001034_208(CP001034|pid:none) Natranaerobius thermophilus JW/N... 50 9e-05
(Q6XYX4) RecName: Full=30S ribosomal protein S8; &AY198133_34(A... 49 1e-04
(Q034Z7) RecName: Full=30S ribosomal protein S8; &CP000423_2359... 49 2e-04
AM285304_116(AM285304|pid:none) Spiroplasma citri GII3-3X chromo... 47 4e-04
(A6LEH7) RecName: Full=30S ribosomal protein S8; &CP000140_2296... 47 4e-04
(Q03ZN2) RecName: Full=30S ribosomal protein S8; &CP000414_168(... 47 6e-04
(B7GJ81) RecName: Full=30S ribosomal protein S8; &CP000922_119(... 47 6e-04
CP001015_203(CP001015|pid:none) Streptococcus pneumoniae G54, co... 46 0.001
(B2V7J9) RecName: Full=30S ribosomal protein S8; &CP001080_270(... 46 0.001
(A1KRI7) RecName: Full=30S ribosomal protein S8; &(A9M3V2) RecN... 46 0.001
(A4XLR6) RecName: Full=30S ribosomal protein S8; &CP000679_2186... 46 0.001
CP000943_322(CP000943|pid:none) Methylobacterium sp. 4-46, compl... 45 0.002
(Q5L409) RecName: Full=30S ribosomal protein S8; 45 0.002
(A8YXL9) RecName: Full=30S ribosomal protein S8; &CP000517_259(... 45 0.002
(Q9Z9K0) RecName: Full=30S ribosomal protein S8; &AB017508_23(A... 45 0.003
(Q5FM77) RecName: Full=30S ribosomal protein S8; &CP000033_289(... 45 0.003
(A6KYI1) RecName: Full=30S ribosomal protein S8; &CP000139_765(... 45 0.003
CP001349_1859(CP001349|pid:none) Methylobacterium nodulans ORS 2... 44 0.004
(Q21M44) RecName: Full=30S ribosomal protein S8; &CP000282_971(... 44 0.004
(A5EXA4) RecName: Full=30S ribosomal protein S8; &CP000513_1197... 44 0.004
(Q98PZ6) RecName: Full=30S ribosomal protein S8; &AL445565_46(A... 44 0.005
(Q9CDX7) RecName: Full=30S ribosomal protein S8; &AE005176_2084... 44 0.005
CP001131_1932(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 44 0.005
(A3DJI6) RecName: Full=30S ribosomal protein S8; &CP000568_2873... 44 0.005
(Q2K9K2) RecName: Full=30S ribosomal protein S8; &CP000133_1662... 44 0.006
CP000633_1365(CP000633|pid:none) Agrobacterium vitis S4 chromoso... 44 0.006
CP000860_231(CP000860|pid:none) Candidatus Desulforudis audaxvia... 44 0.006
(A3CK77) RecName: Full=30S ribosomal protein S8; &CP000387_112(... 44 0.006
(A2RNN9) RecName: Full=30S ribosomal protein S8; &(Q02W39) RecN... 44 0.006
BA000043_120(BA000043|pid:none) Geobacillus kaustophilus HTA426 ... 44 0.006
AY552545_90(AY552545|pid:none) Uncultured marine gamma proteobac... 43 0.008
CP001103_946(CP001103|pid:none) Alteromonas macleodii 'Deep ecot... 43 0.008
(Q8A490) RecName: Full=30S ribosomal protein S8; &AE015928_2712... 43 0.008
(A0T0J2) RecName: Full=30S ribosomal protein S8, chloroplastic; ... 43 0.010
(A9BG04) RecName: Full=30S ribosomal protein S8; &CP000879_751(... 43 0.010
(Q6F7S6) RecName: Full=30S ribosomal protein S8; &CR543861_2888... 43 0.010
(A8F999) RecName: Full=30S ribosomal protein S8; &CP000813_116(... 42 0.014
(Q6CZY4) RecName: Full=30S ribosomal protein S8; &BX950851_3990... 42 0.014
(Q7NQG6) RecName: Full=30S ribosomal protein S8; &AE016825_4172... 42 0.014
(A8ESV7) RecName: Full=30S ribosomal protein S8; &CP000361_746(... 42 0.014
(Q74L76) RecName: Full=30S ribosomal protein S8; &AE017198_359(... 42 0.014
(A7GK34) RecName: Full=30S ribosomal protein S8; &CP000764_116(... 42 0.014
(Q3IJJ9) RecName: Full=30S ribosomal protein S8; &CR954246_2739... 42 0.014
(B5YDV7) RecName: Full=30S ribosomal protein S8; &CP001146_828(... 42 0.018
CU459003_3801(CU459003|pid:none) Magnetospirillum gryphiswaldens... 42 0.018
(Q0AUJ4) RecName: Full=30S ribosomal protein S8; &CP000448_2251... 42 0.018
(Q67JV7) RecName: Full=30S ribosomal protein S8; &AP006840_3058... 42 0.018
(Q7VKE7) RecName: Full=30S ribosomal protein S8; &AE017143_1658... 42 0.018
(Q0AII2) RecName: Full=30S ribosomal protein S8; &CP000450_551(... 42 0.018
(Q85FV0) RecName: Full=30S ribosomal protein S8, chloroplastic; ... 42 0.018
(Q5L8C3) RecName: Full=30S ribosomal protein S8; &(Q64NM2) RecN... 42 0.018
D64125_1(D64125|pid:none) Bacillus subtilis genes for ribosomal ... 42 0.018
(Q2IJ72) RecName: Full=30S ribosomal protein S8; &CP000251_1925... 42 0.018
(P12879) RecName: Full=30S ribosomal protein S8; Short=... 42 0.023
CP000863_3264(CP000863|pid:none) Acinetobacter baumannii ACICU, ... 42 0.023
(Q3BWW9) RecName: Full=30S ribosomal protein S8; &AM039952_1013... 42 0.023
(A7HBN2) RecName: Full=30S ribosomal protein S8; &CP000769_1908... 42 0.023
(Q8PNR3) RecName: Full=30S ribosomal protein S8; &AE008923_977(... 42 0.023
(B1YGW4) RecName: Full=30S ribosomal protein S8; &CP001022_109(... 42 0.023
FP236842_3360(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/9... 41 0.030
CP001154_266(CP001154|pid:none) Laribacter hongkongensis HLHK9, ... 41 0.030
(A0R8J4) RecName: Full=30S ribosomal protein S8; &(B7HJ62) RecN... 41 0.030
CU469464_355(CU469464|pid:none) Candidatus Phytoplasma mali stra... 41 0.030
(A1VJ29) RecName: Full=30S ribosomal protein S8; &CP000529_330(... 41 0.030
CP001111_770(CP001111|pid:none) Stenotrophomonas maltophilia R55... 41 0.040
CU466930_1070(CU466930|pid:none) Candidatus Cloacamonas acidamin... 41 0.040
(A7MPG4) RecName: Full=30S ribosomal protein S8; &CP000783_21(C... 41 0.040
(B2FQJ8) RecName: Full=30S ribosomal protein S8; &AM743169_871(... 41 0.040
(A4TH06) RecName: Full=30S ribosomal protein S8; &(A7FNM0) RecN... 41 0.040
(Q0BYC8) RecName: Full=30S ribosomal protein S8; &CP000158_2781... 41 0.040
(A5WCK4) RecName: Full=30S ribosomal protein S8; &CP000713_435(... 41 0.040
(A1AGJ5) RecName: Full=30S ribosomal protein S8; &(A7ZSJ5) RecN... 40 0.052
(A1JS16) RecName: Full=30S ribosomal protein S8; &AM286415_3747... 40 0.052
(Q15X59) RecName: Full=30S ribosomal protein S8; &CP000388_996(... 40 0.052
(Q2RFR1) RecName: Full=30S ribosomal protein S8; &CP000232_2386... 40 0.052
AM422018_572(AM422018|pid:none) Candidatus Phytoplasma australie... 40 0.052
(Q03PX1) RecName: Full=30S ribosomal protein S8; &CP000416_1574... 40 0.052
(Q2W2K5) RecName: Full=30S ribosomal protein S8; &AP007255_3116... 40 0.052
AP010904_1234(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 40 0.052
(A6TEV8) RecName: Full=30S ribosomal protein S8; &AP006725_4557... 40 0.052
(Q3A9T0) RecName: Full=30S ribosomal protein S8; &CP000141_2232... 40 0.052
(A1WKA2) RecName: Full=30S ribosomal protein S8; &CP000542_2266... 40 0.052
AY773199_8(AY773199|pid:none) Synthetic construct 30S ribosomal ... 40 0.052
(A9NEE7) RecName: Full=30S ribosomal protein S8; &CP000896_83(C... 40 0.067
CU179680_534(CU179680|pid:none) Mycoplasma agalactiae PG2 chromo... 40 0.067
CP001029_2116(CP001029|pid:none) Methylobacterium populi BJ001, ... 40 0.067
(Q8UE32) RecName: Full=30S ribosomal protein S8; &AB2814(AB2814... 40 0.067
(Q12G89) RecName: Full=30S ribosomal protein S8; &CP000316_486(... 40 0.067
(A9MN62) RecName: Full=30S ribosomal protein S8; &CP000880_4038... 40 0.067
(Q49ZF4) RecName: Full=30S ribosomal protein S8; &AP008934_677(... 40 0.067
(A1TJT1) RecName: Full=30S ribosomal protein S8; &CP000512_601(... 40 0.067
CP001275_930(CP001275|pid:none) Thermomicrobium roseum DSM 5159,... 40 0.067
AY826382_2(AY826382|pid:none) Halimeda tuna voucher H.0113 ribos... 40 0.067
CP001600_3446(CP001600|pid:none) Edwardsiella ictaluri 93-146, c... 40 0.088
CP001229_1695(CP001229|pid:none) Sulfurihydrogenibium azorense A... 40 0.088
AY826381_2(AY826381|pid:none) Halimeda taenicola voucher HV285-1... 40 0.088
FJ624558_2(FJ624558|pid:none) Halimeda lacrimosa voucher H.0308 ... 40 0.088
CP000817_4398(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 40 0.088
FJ624557_2(FJ624557|pid:none) Halimeda gracilis voucher HV461 ri... 40 0.088
(Q88XX2) RecName: Full=30S ribosomal protein S8; &AL935254_259(... 40 0.088
(P04446) RecName: Full=30S ribosomal protein S8; &CP000123_646(... 40 0.088
AE016828_214(AE016828|pid:none) Coxiella burnetii RSA 493, compl... 39 0.11
CP000733_1668(CP000733|pid:none) Coxiella burnetii Dugway 5J108-... 39 0.11
(A1W322) RecName: Full=30S ribosomal protein S8; &CP000539_391(... 39 0.11
(Q11QC6) RecName: Full=30S ribosomal protein S8; &CP000383_3096... 39 0.11
(Q3J8S8) RecName: Full=30S ribosomal protein S8; &CP000127_2214... 39 0.11
X01563_6(X01563|pid:none) Escherichia coli spc ribosomal protein... 39 0.11
(A6X0D2) RecName: Full=30S ribosomal protein S8; &CP000758_1954... 39 0.11
(Q47J89) RecName: Full=30S ribosomal protein S8; &CP000089_333(... 39 0.11
(Q11HR6) RecName: Full=30S ribosomal protein S8; &CP000390_1654... 39 0.11
AY826376_2(AY826376|pid:none) Halimeda discoidea voucher SOC299 ... 39 0.11
CP001089_1342(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 39 0.11
FJ624556_2(FJ624556|pid:none) Halimeda gracilis voucher HV824 ri... 39 0.11
(Q6MSN9) RecName: Full=30S ribosomal protein S8; 39 0.15
(Q8YHM6) RecName: Full=30S ribosomal protein S8; &AE008917_770(... 39 0.15
(A1T0C8) RecName: Full=30S ribosomal protein S8; &CP000510_3322... 39 0.15
CP001562_1151(CP001562|pid:none) Bartonella grahamii as4aup, com... 39 0.15
(Q1MPQ1) RecName: Full=30S ribosomal protein S8; &AM180252_971(... 39 0.15
AM049973_2(AM049973|pid:none) Halimeda cylindracea plastid rpl5 ... 39 0.15
(A9VP91) RecName: Full=30S ribosomal protein S8; &CP000903_119(... 39 0.15
(A4GYU6) RecName: Full=30S ribosomal protein S8, chloroplastic; ... 39 0.15
(Q6FZD6) RecName: Full=30S ribosomal protein S8; &BX897700_784(... 39 0.20
(Q50304) RecName: Full=30S ribosomal protein S8; &S62828(S62828... 39 0.20
(B6IRS0) RecName: Full=30S ribosomal protein S8; &CP000613_703(... 39 0.20
(A4WFB4) RecName: Full=30S ribosomal protein S8; &CP000653_3704... 39 0.20
(A0M584) RecName: Full=30S ribosomal protein S8; &CU207366_2788... 39 0.20
(A8SED9) RecName: Full=30S ribosomal protein S8, chloroplastic; ... 39 0.20
CP001020_400(CP001020|pid:none) Coxiella burnetii CbuK_Q154, com... 38 0.26
CP001107_411(CP001107|pid:none) Eubacterium rectale ATCC 33656, ... 38 0.26
(A5IHQ0) RecName: Full=30S ribosomal protein S8; &CP000675_403(... 38 0.26
(A4SUX5) RecName: Full=30S ribosomal protein S8; &CP000655_67(C... 38 0.26
(Q2RQX4) RecName: Full=30S ribosomal protein S8; &CP000230_2666... 38 0.26
(Q5HM13) RecName: Full=30S ribosomal protein S8; &(Q8CRH4) RecN... 38 0.26
(Q98N43) RecName: Full=30S ribosomal protein S8; &BA000012_239(... 38 0.26
CP001357_2092(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 38 0.26
(Q4L8A0) RecName: Full=30S ribosomal protein S8; &AP006716_816(... 38 0.26
CP001102_165(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 38 0.33
AY657372_1(AY657372|pid:none) Synthetic construct Peudomonas aer... 38 0.33
(Q7MYG5) RecName: Full=30S ribosomal protein S8; &BX571874_253(... 38 0.33
CP000744_841(CP000744|pid:none) Pseudomonas aeruginosa PA7, comp... 38 0.33
(P57577) RecName: Full=30S ribosomal protein S8; &BA000003_475(... 38 0.33
(A5VLJ1) RecName: Full=30S ribosomal protein S8; &(B2G8W4) RecN... 38 0.33
AY826369_2(AY826369|pid:none) Halimeda cuneata voucher KZN2K4-21... 37 0.44
(Q92QF6) RecName: Full=30S ribosomal protein S8; &AL591688_1375... 37 0.44
(A1TYL1) RecName: Full=30S ribosomal protein S8; &CP000514_722(... 37 0.44
DQ826355_1(DQ826355|pid:none) Prunus hortulana rpL14-rpS8 interg... 37 0.44
AM049977_2(AM049977|pid:none) Halimeda incrassata plastid rpl5 g... 37 0.44
(Q0K633) RecName: Full=30S ribosomal protein S8; &(Q46WF8) RecN... 37 0.44
(A6U873) RecName: Full=30S ribosomal protein S8; &CP000738_993(... 37 0.44
(A8GKI3) RecName: Full=30S ribosomal protein S8; &CP000826_4513... 37 0.44
(A1KB13) RecName: Full=30S ribosomal protein S8; 37 0.44
CP001321_1303(CP001321|pid:none) Haemophilus parasuis SH0165, co... 37 0.44
(A4SSZ2) RecName: Full=30S ribosomal protein S8; &CP000644_3797... 37 0.57
CU694391_136(CU694391|pid:none) Ralstonia solanacearum strain Mo... 37 0.57
(Q9A8T9) RecName: Full=30S ribosomal protein S8; &AE005673_1255... 37 0.57
(Q7VTB7) RecName: Full=30S ribosomal protein S8; &(Q7W2E1) RecN... 37 0.75
(Q9CL44) RecName: Full=30S ribosomal protein S8; &AE004439_1401... 37 0.75
AP008971_169(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 37 0.75
AJ970572_1(AJ970572|pid:none) Candidatus Phytoplasma solani rpsH... 37 0.75
Z21677_16(Z21677|pid:none) Thermotoga maritima DNA for spc operon. 37 0.75
(A5CCJ8) RecName: Full=30S ribosomal protein S8; &AM494475_362(... 37 0.75
DQ069533_1(DQ069533|pid:none) Typha latifolia ribosomal protein ... 37 0.75
(A8G1D4) RecName: Full=30S ribosomal protein S8; &CP000821_4294... 37 0.75
AM049974_2(AM049974|pid:none) Halimeda melanesica plastid rpl5 g... 37 0.75
AP009153_887(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DNA... 37 0.75
(Q2L273) RecName: Full=30S ribosomal protein S8; &AM167904_48(A... 37 0.75
(Q7MTM7) RecName: Full=30S ribosomal protein S8; &AE015924_1647... 37 0.75
(Q0ABG1) RecName: Full=30S ribosomal protein S8; &CP000453_467(... 36 0.97
(Q13TI4) RecName: Full=30S ribosomal protein S8; &CP000270_4067... 36 0.97
AM049972_2(AM049972|pid:none) Halimeda borneensis plastid rpl5 g... 36 0.97
FJ624555_2(FJ624555|pid:none) Halimeda magnidisca voucher H.0814... 36 0.97
(A0KF35) RecName: Full=30S ribosomal protein S8; &CP000462_304(... 36 0.97
(B1AIN4) RecName: Full=30S ribosomal protein S8; &(B5ZB54) RecN... 36 0.97
CP001010_61(CP001010|pid:none) Polynucleobacter necessarius subs... 36 0.97
EU017195_1(EU017195|pid:none) Scaevola aemula ribosomal protein ... 36 0.97
CP001614_810(CP001614|pid:none) Teredinibacter turnerae T7901, c... 36 0.97
(Q28UU0) RecName: Full=30S ribosomal protein S8; &CP000264_605(... 36 0.97
(Q39XZ2) RecName: Full=30S ribosomal protein S8; &CP000148_632(... 36 0.97
(Q1QDH2) RecName: Full=30S ribosomal protein S8; &CP000323_497(... 36 1.3
(A6W378) RecName: Full=30S ribosomal protein S8; &CP000749_4214... 36 1.3
(A1V889) RecName: Full=30S ribosomal protein S8; &(A2S7J0) RecN... 36 1.3
(A5ELL3) RecName: Full=30S ribosomal protein S8; &CP000494_4752... 36 1.3
(A7HWS5) RecName: Full=30S ribosomal protein S8; &CP000774_2735... 36 1.3
(Q0ANR4) RecName: Full=30S ribosomal protein S8; &CP000449_1777... 36 1.3
(Q65QW9) RecName: Full=30S ribosomal protein S8; &AE016827_2034... 36 1.3
(A5UDT3) RecName: Full=30S ribosomal protein S8; &(A5UHU5) RecN... 36 1.3
(A4YSK6) RecName: Full=30S ribosomal protein S8; &CU234118_2909... 36 1.3
(Q48D50) RecName: Full=30S ribosomal protein S8; &(Q4ZMQ8) RecN... 36 1.3
(A6VLK2) RecName: Full=30S ribosomal protein S8; &CP000746_467(... 36 1.3
(O52346) RecName: Full=30S ribosomal protein S8; &AE015450_65(A... 36 1.3
(Q9TLU5) RecName: Full=30S ribosomal protein S8, chloroplastic; ... 36 1.3
AP008937_1501(AP008937|pid:none) Lactobacillus fermentum IFO 395... 36 1.3
(Q4A5D5) RecName: Full=30S ribosomal protein S8; &AE017245_623(... 36 1.3
(P46757) RecName: Full=Ribosomal protein S8, mitochondrial; &S5... 36 1.3
(Q3A6N3) RecName: Full=30S ribosomal protein S8; &CP000142_789(... 36 1.3
(Q3SSV2) RecName: Full=30S ribosomal protein S8; &CP000115_1371... 36 1.3
(Q6F1Y0) RecName: Full=30S ribosomal protein S8; &AE017263_137(... 36 1.3
CP000967_1234(CP000967|pid:none) Xanthomonas oryzae pv. oryzae P... 36 1.3
(Q1R0G1) RecName: Full=30S ribosomal protein S8; &CP000285_432(... 35 1.7
(P06362) RecName: Full=30S ribosomal protein S8, chloroplastic; ... 35 1.7
(Q47LK7) RecName: Full=30S ribosomal protein S8; &CP000088_2625... 35 1.7
(B7J481) RecName: Full=30S ribosomal protein S8; &CP001132_503(... 35 1.7
(A8G748) RecName: Full=30S ribosomal protein S8; &CP000825_1811... 35 1.7
AM049991_2(AM049991|pid:none) Halimeda macrophysa plastid rpl5 g... 35 1.7
AP008981_1058(AP008981|pid:none) Orientia tsutsugamushi str. Ike... 35 1.7
FJ597983_58(FJ597983|pid:none) Megaleranthis saniculifolia chlor... 35 1.7
EU835853_54(EU835853|pid:none) Cicer arietinum voucher ICCV 10 c... 35 1.7
(A6YGD0) RecName: Full=30S ribosomal protein S8, chloroplastic; ... 35 1.7
(Q1AU43) RecName: Full=30S ribosomal protein S8; &CP000386_2104... 35 1.7
CP001087_3554(CP001087|pid:none) Desulfobacterium autotrophicum ... 35 1.7
AY826372_2(AY826372|pid:none) Halimeda cuneata voucher SOC252 ri... 35 1.7
AM181176_5395(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 35 1.7
(Q01WA6) RecName: Full=30S ribosomal protein S8; &CP000473_5043... 35 1.7
(A4XZ76) RecName: Full=30S ribosomal protein S8; &CP000680_3867... 35 2.2
AP009385_2934(AP009385|pid:none) Burkholderia multivorans ATCC 1... 35 2.2
(Q1KVR3) RecName: Full=30S ribosomal protein S8, chloroplastic; ... 35 2.2
(B6JEX9) RecName: Full=30S ribosomal protein S8; &CP001196_1667... 35 2.2
CP001503_262(CP001503|pid:none) Burkholderia glumae BGR1 chromos... 35 2.2
DQ826363_1(DQ826363|pid:none) Eupatorium capillifolium rpL14-rpS... 35 2.2
CP001280_553(CP001280|pid:none) Methylocella silvestris BL2, com... 35 2.2
(Q2NQN6) RecName: Full=30S ribosomal protein S8; &AP008232_2264... 35 2.2
CP001616_113(CP001616|pid:none) Tolumonas auensis DSM 9187, comp... 35 2.2
(Q06GW1) RecName: Full=30S ribosomal protein S8, chloroplastic; ... 35 2.2
(Q6MJ26) RecName: Full=30S ribosomal protein S8; &BX842654_85(B... 35 2.8
(A4QK53) RecName: Full=30S ribosomal protein S8, chloroplastic; ... 35 2.8
(Q1H4M3) RecName: Full=30S ribosomal protein S8; &CP000284_293(... 35 2.8
(A4VHP4) RecName: Full=30S ribosomal protein S8; &CP000304_787(... 35 2.8
CP000767_1836(CP000767|pid:none) Campylobacter curvus 525.92, co... 35 2.8
(A6LLM7) RecName: Full=30S ribosomal protein S8; &CP000716_946(... 35 2.8
(Q3K602) RecName: Full=30S ribosomal protein S8; &CP000094_5060... 35 2.8
(Q7YJU3) RecName: Full=30S ribosomal protein S8, chloroplastic; ... 35 2.8
(Q8EUC7) RecName: Full=30S ribosomal protein S8; &BA000026_999(... 35 2.8
(Q6NJ88) RecName: Full=30S ribosomal protein S8; &BX248355_140(... 35 2.8
(Q72NH5) RecName: Full=30S ribosomal protein S8; &(Q9XD22) RecN... 34 3.7
(Q8YPJ2) RecName: Full=30S ribosomal protein S8; &AC2331(AC2331... 34 3.7
EU117376_57(EU117376|pid:none) Manihot esculenta cultivar TME3 c... 34 3.7
(A0KRN8) RecName: Full=30S ribosomal protein S8; &(A1REC8) RecN... 34 3.7
(P59030) RecName: Full=30S ribosomal protein S8; &AE013218_462(... 34 3.7
(A4QJN4) RecName: Full=30S ribosomal protein S8, chloroplastic; ... 34 3.7
(A9IHT5) RecName: Full=30S ribosomal protein S8; &AM902716_4957... 34 3.7
(Q4K547) RecName: Full=30S ribosomal protein S8; &CP000076_5485... 34 3.7
FJ695500_55(FJ695500|pid:none) Jatropha curcas chloroplast, comp... 34 3.7
(Q7VQD4) RecName: Full=30S ribosomal protein S8; &BX248583_192(... 34 3.7
(A6T3J0) RecName: Full=30S ribosomal protein S8; &CP000269_3397... 34 3.7
DQ680301_1(DQ680301|pid:none) Mannheimia haemolytica strain A1 3... 34 3.7
(Q3MFA8) RecName: Full=30S ribosomal protein S8; &CP000117_702(... 34 4.8
(Q06FM9) RecName: Full=30S ribosomal protein S8, chloroplastic; ... 34 4.8
(A6GZ85) RecName: Full=30S ribosomal protein S8; &AM398681_1289... 34 4.8
CP000961_4625(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 34 4.8
DQ826351_1(DQ826351|pid:none) Minuartia uniflora rpL14-rpS8 inte... 34 4.8
DQ069530_1(DQ069530|pid:none) Ginkgo biloba ribosomal protein S8... 34 4.8
(P59032) RecName: Full=30S ribosomal protein S8, chloroplastic; ... 34 4.8
AP010819_53(AP010819|pid:none) Ephedra equisetina chloroplast DN... 34 4.8
(Q70XX5) RecName: Full=30S ribosomal protein S8, chloroplastic; ... 34 4.8
(A2BYS3) RecName: Full=30S ribosomal protein S8; &CP000552_1726... 34 4.8
(B5Y974) RecName: Full=30S ribosomal protein S8; &CP001145_949(... 34 4.8
(Q39KF3) RecName: Full=30S ribosomal protein S8; &CP000151_280(... 33 6.3
(Q6B8W6) RecName: Full=30S ribosomal protein S8, chloroplastic; ... 33 6.3
(Q0ZIY3) RecName: Full=30S ribosomal protein S8, chloroplastic; ... 33 6.3
EU849490_44(EU849490|pid:none) Gonystylus bancanus chloroplast, ... 33 6.3
(B3QBW6) RecName: Full=30S ribosomal protein S8; &(Q6N4U7) RecN... 33 6.3
(Q89J98) RecName: Full=30S ribosomal protein S8; &BA000040_5386... 33 6.3
(Q318J7) RecName: Full=30S ribosomal protein S8; &CP000111_1789... 33 6.3
CP001157_622(CP001157|pid:none) Azotobacter vinelandii DJ, compl... 33 6.3
AM746676_1847(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 33 8.2
(Q09WY2) RecName: Full=30S ribosomal protein S8, chloroplastic; ... 33 8.2
AF115283_19(AF115283|pid:none) Leptospira interrogans S10-spc-al... 33 8.2
(Q09ME2) RecName: Full=30S ribosomal protein S8, chloroplastic; ... 33 8.2
(B7J257) RecName: Full=30S ribosomal protein S8; &(O51445) RecN... 33 8.2
>(P46793) RecName: Full=40S ribosomal protein S15a; AltName:
Full=Ribosomal protein S24;
&AC115606_4(AC115606|pid:none)
Length = 130
Score = 261 bits (666), Expect = 2e-68
Identities = 130/130 (100%), Positives = 130/130 (100%)
Frame = +2
Query: 227 MVRISVLNDCLNSIVNAERQGKRQVLVRPSSKVIVKFLEVMMKKRYIGEFEIVDDHRSGK 406
MVRISVLNDCLNSIVNAERQGKRQVLVRPSSKVIVKFLEVMMKKRYIGEFEIVDDHRSGK
Sbjct: 1 MVRISVLNDCLNSIVNAERQGKRQVLVRPSSKVIVKFLEVMMKKRYIGEFEIVDDHRSGK 60
Query: 407 IVIDLIGRINKCGVISPRFDVTLDEIEKWASYLLPSRQFGHIVLTTSLGIMDHNEAKTRH 586
IVIDLIGRINKCGVISPRFDVTLDEIEKWASYLLPSRQFGHIVLTTSLGIMDHNEAKTRH
Sbjct: 61 IVIDLIGRINKCGVISPRFDVTLDEIEKWASYLLPSRQFGHIVLTTSLGIMDHNEAKTRH 120
Query: 587 TGGKLLGFFY 616
TGGKLLGFFY
Sbjct: 121 TGGKLLGFFY 130
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 921,798,901
Number of extensions: 16025979
Number of successful extensions: 37574
Number of sequences better than 10.0: 408
Number of HSP's gapped: 37515
Number of HSP's successfully gapped: 409
Length of query: 231
Length of database: 1,051,180,864
Length adjustment: 124
Effective length of query: 107
Effective length of database: 649,847,548
Effective search space: 69533687636
Effective search space used: 69533687636
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
|
| PSORT |
|
| VS (DIR, S) |
8 |
| VH (FL, L) |
0 |
| VF (FL, S) |
1 |
| AH (FL, L) |
0 |
| AF (FL, S) |
1 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
1 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |