| Contig-U12584-1 |
| Contig ID |
Contig-U12584-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
599 |
| Chromosome number (1..6, M) |
3 |
| Chromosome length |
6358359 |
| Start point |
1078369 |
| End point |
1077836 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
4 |
| Number of EST |
7 |
| Link to clone list |
U12584 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.12. 2 |
| Homology vs DNA |
Query= Contig-U12584-1 (Contig-U12584-1Q) /CSM_Contig/Contig-U12584-1Q.Seq.d
(609 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ418802) Dictyostelium discoideum cDNA clone:ddv34f03, 5' ... 565 e-169 2
(BJ437373) Dictyostelium discoideum cDNA clone:ddv34f03, 3' ... 565 e-169 2
(AU266497) Dictyostelium discoideum vegetative cDNA clone:VS... 565 e-165 2
(AU270390) Dictyostelium discoideum vegetative cDNA clone:VS... 565 e-160 2
(AU270391) Dictyostelium discoideum vegetative cDNA clone:VS... 565 e-160 2
(AU268687) Dictyostelium discoideum vegetative cDNA clone:VS... 565 e-160 2
(CK984953) re40a05.y2 Meloidogyne incognita J3 J4 SL1 pGEM M... 60 3e-24 3
(CN443811) re69e04.y1 Meloidogyne incognita J3 J4 SL1 pGEM M... 60 3e-24 3
(CK984966) re40b09.y2 Meloidogyne incognita J3 J4 SL1 pGEM M... 60 3e-24 3
(CN443436) re67b12.y1 Meloidogyne incognita J3 J4 SL1 pGEM M... 60 1e-23 3
(CN443747) re68e01.y1 Meloidogyne incognita J3 J4 SL1 pGEM M... 60 7e-22 3
(CN478039) rx45c10.y1.gz Meloidogyne paranaensis egg SL1 pGE... 52 1e-19 3
(FF730004) XABT44504.fwd Gateway compatible cien cDNA librar... 78 2e-16 2
(FF725510) XABT41039.fwd Gateway compatible cien cDNA librar... 78 2e-16 2
(FF776293) XABT76717.fwd Gateway compatible cien cDNA librar... 78 2e-16 2
(FF798663) XABT91885.fwd Gateway compatible cien cDNA librar... 78 2e-16 2
(FF704280) XABT112345.fwd Gateway compatible cien cDNA libra... 78 2e-16 2
(FK100245) XABT148578.b1 Gateway compatible cien cDNA librar... 78 2e-16 2
(FF760379) XABT66434.fwd Gateway compatible cien cDNA librar... 78 2e-16 2
(FF773681) XABT75028.fwd Gateway compatible cien cDNA librar... 78 2e-16 2
(FK186674) XABT202568.b1 Gateway compatible cien cDNA librar... 78 2e-16 2
(FK171583) XABT193355.b1 Gateway compatible cien cDNA librar... 78 2e-16 2
(FK212173) XABT218462.b1 Gateway compatible cien cDNA librar... 78 2e-16 2
(FK091200) XABT143038.b1 Gateway compatible cien cDNA librar... 78 2e-16 2
(FF705849) XABT27395.fwd Gateway compatible cien cDNA librar... 78 8e-16 2
(EX713214) SB_AW215131d04.ab1.y AW2 Schistosoma mansoni cDNA... 64 3e-15 3
(FK118152) XABT160706.b1 Gateway compatible cien cDNA librar... 70 5e-14 2
(FF794485) XABT89067.fwd Gateway compatible cien cDNA librar... 70 5e-14 2
(FK073813) XABT132153.b1 Gateway compatible cien cDNA librar... 70 5e-14 2
(FF805337) XABT96256.fwd Gateway compatible cien cDNA librar... 70 5e-14 2
(FK065024) XABT126905.b1 Gateway compatible cien cDNA librar... 70 5e-14 2
(CZ542320) SRAA-aad43e02.b1 Strongyloides ratti whole genome... 58 2e-13 2
(FC820972) Sr_TOPOF_19j21_TOPOF S. ratti mixed stage TOPO St... 58 2e-13 2
(AY915733) Schistosoma japonicum SJCHGC09474 protein mRNA, c... 84 7e-12 1
(CV739158) SJAL_019_01.T3 SJL Schistosoma japonicum cDNA, mR... 84 7e-12 1
(CV737328) SJAL_007_74.T3 SJL Schistosoma japonicum cDNA, mR... 84 7e-12 1
(CV689634) sjs5-008_G10_sjs5-008G10-T3 SJS Schistosoma japon... 84 7e-12 1
(CV674695) RET7SJ_34E08.T7 Schistosoma japonicum reverse cDN... 84 7e-12 1
(FF309703) 279376634 Pea aphid whole body normalized full le... 60 1e-11 2
(FF306606) 279366716 Pea aphid whole body normalized full le... 60 1e-11 2
(EX624964) 255428721 Pea aphid whole body normalized full le... 60 1e-11 2
(FF298793) 279325448 Pea aphid whole body normalized full le... 60 1e-11 2
(FF298617) 279321716 Pea aphid whole body normalized full le... 60 1e-11 2
(EX621462) 255417319 Pea aphid whole body normalized full le... 60 1e-11 2
(FF316735) 280381063 Pea aphid whole body normalized full le... 60 1e-11 2
(FF316613) 280387522 Pea aphid whole body normalized full le... 60 1e-11 2
(DV739299) ID0AFF13AF05CM1 ID0AFF Acyrthosiphon pisum cDNA c... 60 1e-11 2
(FF334881) 280458381 Pea aphid whole body normalized full le... 60 1e-11 2
(EX622286) 255419945 Pea aphid whole body normalized full le... 60 1e-11 2
(EX608373) 255363459 Pea aphid whole body normalized full le... 60 1e-11 2
(FF337764) 280468305 Pea aphid whole body normalized full le... 60 1e-11 2
(EX617818) 255401227 Pea aphid whole body normalized full le... 60 1e-11 2
(EX602070) 255328788 Pea aphid whole body normalized full le... 60 1e-11 2
(EX634921) 256598320 Pea aphid whole body normalized full le... 60 1e-11 2
(EX613536) 255383082 Pea aphid whole body normalized full le... 60 1e-11 2
(EX611418) 255375218 Pea aphid whole body normalized full le... 60 1e-11 2
(EX616204) 255394530 Pea aphid whole body normalized full le... 60 1e-11 2
(CN758583) ID0AAA22CE01RM1 ApMS Acyrthosiphon pisum cDNA clo... 60 1e-11 2
(CN758789) ID0AAA23AG09RM1 ApMS Acyrthosiphon pisum cDNA clo... 60 1e-11 2
(EX635860) 256603967 Pea aphid whole body normalized full le... 60 1e-11 2
(CV830277) ID0ACC15AD01RM1 ID0ACC Acyrthosiphon pisum cDNA c... 60 1e-11 2
(BQ613561) rd09c09.y1 Meloidogyne incognita egg SL1 TOPO v1 ... 58 1e-11 2
(CV177452) LEPISMA15PCR_G02_1_008 Tricholepisma aurea cDNA T... 70 4e-11 2
(FC821600) Sr_TOPOR_019j21_TOPOR S. ratti mixed stage TOPO S... 50 1e-10 2
(CX815769) LOAL08F07.F Caterpillar Lonomia obliqua library L... 54 1e-10 2
(EA163893) Sequence 28208 from patent US 7214786. 50 2e-10 3
(FK225095) XABT227157.b1 Gateway compatible cien cDNA librar... 78 4e-10 1
(FC183404) CAAB4367.fwd CAAB Nematostella vectensis nemve_P1... 78 4e-10 1
(FC183403) CAAB4367.rev CAAB Nematostella vectensis nemve_P1... 78 4e-10 1
(FC181032) CAAB2630.fwd CAAB Nematostella vectensis nemve_P1... 78 4e-10 1
(DY662259) SV_CP_09_F12 SV_CP Senecio vulgaris subsp. vulgar... 54 6e-10 2
(DY666362) SC_MF_11_E01 SC_MF Senecio cambrensis cDNA 5', mR... 54 6e-10 2
(ES587679) Hm_pwAE2_44A09_M13rev Amplicon Express mixed pupa... 76 2e-09 1
(ES586380) Hm_pwAE2_27A05_M13rev Amplicon Express mixed pupa... 76 2e-09 1
(AV880614) Ciona intestinalis cDNA, clone:rcicl58e05, 3' end... 76 2e-09 1
(FC617822) CAXS9066.fwd CAXS Lottia gigantea from head, foot... 56 2e-09 2
(FC625070) CAXT4258.fwd CAXT Lottia gigantea from mantle Lot... 56 2e-09 2
(FC792080) CBGC21394.fwd CBGC Lottia gigantea 15h 18h embryo... 56 2e-09 2
(FC642532) CAXU604.fwd CAXU Lottia gigantea from female gona... 56 2e-09 2
(FC735169) CBBG9480.fwd CBBG Lottia gigantea 12,15,18h embry... 56 2e-09 2
(FC797199) CBGC24649.fwd CBGC Lottia gigantea 15h 18h embryo... 56 2e-09 2
(FC634546) CAXT9307.fwd CAXT Lottia gigantea from mantle Lot... 56 2e-09 2
(FC634545) CAXT9307.rev CAXT Lottia gigantea from mantle Lot... 56 2e-09 2
(FC803719) CBGC5968.fwd CBGC Lottia gigantea 15h 18h embryos... 56 2e-09 2
(EC390318) C04_C04nb2b7_pDNR-F_440537 Myzus persicae, tobacc... 52 2e-09 2
(EC390307) C03_C03nb2b5_pDNR-F_440529 Myzus persicae, tobacc... 52 2e-09 2
(FF760378) XABT66434.rev Gateway compatible cien cDNA librar... 74 6e-09 1
(BG301815) kt05g07.y1 Strongyloides ratti L3 adult SL1 Topo1... 58 8e-09 2
(BY921968) Bombyx mori cDNA, clone:E_EL_ovS0_10E10_F_0, 5' e... 44 1e-08 3
(CK491636) rswab0_010181.y1 swa Bombyx mori cDNA, mRNA seque... 44 1e-08 3
(DC542325) Bombyx mori cDNA, clone:E_FL_dpe-_15P22_F_0, 5' e... 44 1e-08 3
(BB982393) Bombyx mori mRNA, EST clone:ovS3006A05r, 3' end s... 44 1e-08 3
(AV405688) Bombyx mori cDNA clone:wdV30116. 44 1e-08 3
(BP179705) Bombyx mori cDNA, clone: ovS306A05f, 5' end seque... 44 1e-08 3
(DC540127) Bombyx mori cDNA, clone:E_FL_dpe-_04H21_F_0, 5' e... 44 1e-08 3
(BY938941) Bombyx mori cDNA, clone:E_FL_e100_08N12_F_0, 5' e... 44 1e-08 3
(DC539544) Bombyx mori cDNA, clone:E_FL_dpe-_01H01_F_0, 5' e... 44 1e-08 3
(EV465880) MDEST1440 Hessian fly salivary gland cDNA Library... 58 2e-08 3
(BY939471) Bombyx mori cDNA, clone:E_FL_e100_22H18_F_0, 5' e... 44 2e-08 3
(BP180214) Bombyx mori cDNA, clone: ovS312F07f, 5' end seque... 44 2e-08 3
>(BJ418802) Dictyostelium discoideum cDNA clone:ddv34f03, 5' end,
single read.
Length = 499
Score = 565 bits (285), Expect(2) = e-169
Identities = 285/285 (100%)
Strand = Plus / Plus
Query: 41 ctctgtatttatataattacatactttcacatataaaatgttaattaaagtaaaaacttt 100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 ctctgtatttatataattacatactttcacatataaaatgttaattaaagtaaaaacttt 100
Query: 101 aaccggtaaagaaattgaaatcgatatcgatccaacagataagattcaacgtattaaaga 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 aaccggtaaagaaattgaaatcgatatcgatccaacagataagattcaacgtattaaaga 160
Query: 161 aagagttgaagaaaaagaaggtatcccaccatcacaacaaagacttatttttggtggtaa 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 aagagttgaagaaaaagaaggtatcccaccatcacaacaaagacttatttttggtggtaa 220
Query: 221 acaaatgggtgacgacaagcctgcttcagaatattcaattgaaggtggttcagttcttca 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 acaaatgggtgacgacaagcctgcttcagaatattcaattgaaggtggttcagttcttca 280
Query: 281 tttagttttggctttacgtggtggtctttaaataagattatttcg 325
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tttagttttggctttacgtggtggtctttaaataagattatttcg 325
Score = 63.9 bits (32), Expect(2) = e-169
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 gcaatttataaaatcaaatttatatttatctc 32
||||||||||||||||||||||||||||||||
Sbjct: 1 gcaatttataaaatcaaatttatatttatctc 32
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 458,592,350
Number of extensions: 30205172
Number of successful extensions: 2582406
Number of sequences better than 10.0: 1305
Length of query: 609
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 586
Effective length of database: 93,106,754,628
Effective search space: 54560558212008
Effective search space used: 54560558212008
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7. 3 |
| Homology vs Protein |
Query= Contig-U12584-1 (Contig-U12584-1Q) /CSM_Contig/Contig-U12584-1Q.Seq.d
(609 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q54XV3) RecName: Full=NEDD8; AltName: Full=Ubiquitin-like prote... 153 4e-36
CP001328_432(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 134 3e-30
BT075193_1(BT075193|pid:none) Osmerus mordax clone omor-eva-507-... 133 4e-30
(Q9VJ33) RecName: Full=NEDD8; AltName: Full=Ubiquitin-like prote... 133 4e-30
EZ000229_1(EZ000229|pid:none) TSA: Amblyomma americanum Contig11... 133 4e-30
BT083291_1(BT083291|pid:none) Anoplopoma fimbria clone afim-evh-... 132 1e-29
BC055645_1(BC055645|pid:none) Danio rerio neural precursor cell ... 131 1e-29
BC076245_1(BC076245|pid:none) Danio rerio neural precursor cell ... 131 1e-29
BT073010_1(BT073010|pid:none) Oncorhynchus mykiss clone omyk-evn... 130 2e-29
BT057674_1(BT057674|pid:none) Salmo salar clone ssal-eve-509-195... 130 4e-29
BC078600_1(BC078600|pid:none) Xenopus laevis hypothetical protei... 130 4e-29
CP000595_60(CP000595|pid:none) Ostreococcus lucimarinus CCE9901 ... 130 4e-29
(P61282) RecName: Full=NEDD8; AltName: Full=Ubiquitin-like prote... 129 5e-29
(Q8RUC6) RecName: Full=NEDD8-like protein RUB2; AltName: Full=Ub... 128 1e-28
BT071719_1(BT071719|pid:none) Picea sitchensis clone WS0442_N10 ... 128 1e-28
EF144403_1(EF144403|pid:none) Populus trichocarpa clone PX0019_E... 128 1e-28
AM270103_20(AM270103|pid:none) Aspergillus niger contig An05c003... 127 2e-28
AM920428_461(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 127 2e-28
EF146368_1(EF146368|pid:none) Populus trichocarpa clone WS0117_J... 127 3e-28
(Q9SHE7) RecName: Full=NEDD8-like protein RUB1; AltName: Full=Ub... 127 3e-28
EF146180_1(EF146180|pid:none) Populus trichocarpa clone WS0116_A... 127 3e-28
AF240445_1(AF240445|pid:none) Populus tremula x Populus tremuloi... 127 3e-28
EF676128_1(EF676128|pid:none) Picea sitchensis clone WS02711_O04... 127 3e-28
(Q93725) RecName: Full=NEDD8; AltName: Full=Ubiquitin-like prote... 126 4e-28
(P0C073) RecName: Full=NEDD8-like protein RUB1; AltName: Full=Da... 126 4e-28
AY915733_1(AY915733|pid:none) Schistosoma japonicum SJCHGC09474 ... 126 5e-28
AP003725_1(AP003725|pid:none) Oryza sativa Japonica Group genomi... 117 2e-25
(P0C032) RecName: Full=NEDD8-like protein RUB3; AltName: Full=Ub... 117 2e-25
AK158993_1(AK158993|pid:none) Mus musculus visual cortex cDNA, R... 106 6e-22
(O65381) RecName: Full=NEDD8-like protein RUB3; AltName: Full=Ub... 105 1e-21
CR954216_73(CR954216|pid:none) Ostreococcus tauri strain OTTH059... 103 4e-21
CR382132_767(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 102 8e-21
CR382136_301(CR382136|pid:none) Debaryomyces hansenii strain CBS... 102 1e-20
CU928171_524(CU928171|pid:none) Kluyveromyces thermotolerans str... 100 3e-20
AX972880_1(AX972880|pid:none) Sequence 3683 from Patent EP1104808. 99 7e-20
AX885128_1(AX885128|pid:none) Sequence 991 from Patent EP1033401. 99 9e-20
FN357410_6(FN357410|pid:none) Schistosoma mansoni genome sequenc... 99 1e-19
FN316689_1(FN316689|pid:none) Schistosoma japonicum isolate Anhu... 98 2e-19
UQJNI(S17740;S14579) ubiquitin precursor - Phytophthora infestan... 97 4e-19
UQUYSF(B34813)ubiquitin - fall armyworm (fragment) 97 4e-19
AB099083_1(AB099083|pid:none) Bos taurus mRNA for similar to pol... 97 5e-19
EU125031_1(EU125031|pid:none) Eurythoe complanata ribosomal prot... 96 6e-19
AE014188_117(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 96 6e-19
U27577_1(U27577|pid:none) Trichomonas vaginalis polyubiquitin (U... 96 6e-19
AJ937550_1(AJ937550|pid:none) Bathysiphon sp. 3980 partial pub g... 96 6e-19
(P22589) RecName: Full=Ubiquitin; 96 6e-19
AY099116_1(AY099116|pid:none) Haynesina germanica isolate pub1 p... 96 6e-19
AF188158_1(AF188158|pid:none) Oxytricha trifallax ubiquitin gene... 96 6e-19
AJ965259_1(AJ965259|pid:none) Dasytricha ruminantium partial mRN... 96 8e-19
AJ965268_1(AJ965268|pid:none) Eudiplodinium maggii partial mRNA ... 96 8e-19
EF070483_1(EF070483|pid:none) Maconellicoccus hirsutus clone WHM... 96 8e-19
DQ353761_1(DQ353761|pid:none) Ictalurus punctatus isolate C16JH0... 96 8e-19
AJ965276_1(AJ965276|pid:none) Epidinium ecaudatum partial mRNA f... 96 8e-19
BC049478_1(BC049478|pid:none) Danio rerio zgc:66168, mRNA (cDNA ... 96 8e-19
AJ965257_1(AJ965257|pid:none) Dasytricha ruminantium partial mRN... 96 8e-19
EF070591_1(EF070591|pid:none) Maconellicoccus hirsutus clone WHM... 96 8e-19
AJ965263_1(AJ965263|pid:none) Isotricha prostoma partial mRNA fo... 96 8e-19
AJ965277_1(AJ965277|pid:none) Epidinium ecaudatum partial mRNA f... 96 8e-19
FN316690_1(FN316690|pid:none) Schistosoma japonicum isolate Anhu... 96 1e-18
FN323957_1(FN323957|pid:none) Schistosoma japonicum isolate Anhu... 96 1e-18
FN316698_1(FN316698|pid:none) Schistosoma japonicum isolate Anhu... 96 1e-18
AY813866_1(AY813866|pid:none) Schistosoma japonicum clone SJCHGC... 96 1e-18
AY862433_1(AY862433|pid:none) Navicula pelliculosa polyubiquitin... 96 1e-18
FN323949_1(FN323949|pid:none) Schistosoma japonicum isolate Anhu... 96 1e-18
FN323948_1(FN323948|pid:none) Schistosoma japonicum isolate Anhu... 96 1e-18
M30306_1(M30306|pid:none) S.frugiperda ubiquitin gene, 5' end. 96 1e-18
FN323968_1(FN323968|pid:none) Schistosoma japonicum isolate Anhu... 96 1e-18
FN316687_1(FN316687|pid:none) Schistosoma japonicum isolate Anhu... 96 1e-18
AM259605_1(AM259605|pid:none) Salmo salar partial mRNA for ubiqu... 96 1e-18
DQ508963_1(DQ508963|pid:none) Pectinaria gouldii ubiquitin mRNA,... 95 1e-18
BC127395_1(BC127395|pid:none) Danio rerio zgc:153686, mRNA (cDNA... 95 1e-18
AF034789_1(AF034789|pid:none) Amoeba proteus polyubiquitin mRNA,... 95 1e-18
AJ871355_1(AJ871355|pid:none) Nyctotherus ovalis partial gene fo... 95 1e-18
AJ965269_1(AJ965269|pid:none) Metadinium medium partial mRNA for... 95 1e-18
EU558303_1(EU558303|pid:none) Novocrania anomala putative ubiqui... 95 1e-18
Z35759_1(Z35759|pid:none) T.pyriformis (CGL) polyubiquitin gene ... 95 1e-18
AJ277169_1(AJ277169|pid:none) Galdieria sulphuraria mRNA for ubi... 95 1e-18
CU928176_252(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 95 1e-18
FN315480_1(FN315480|pid:none) Schistosoma japonicum isolate Anhu... 95 2e-18
AB021974_1(AB021974|pid:none) Bombyx mori UBI3 mRNA for polyubiq... 95 2e-18
FJ438516_1(FJ438516|pid:none) Epinephelus coioides ubiquitin C v... 95 2e-18
BC168051_1(BC168051|pid:none) Xenopus tropicalis cDNA clone MGC:... 95 2e-18
AK010964_1(AK010964|pid:none) Mus musculus 13 days embryo liver ... 95 2e-18
S11248(S11248)ubiquitin / ribosomal protein CEP52 - mouse (fragm... 95 2e-18
BC049473_1(BC049473|pid:none) Danio rerio zgc:172187, mRNA (cDNA... 95 2e-18
AF395864_1(AF395864|pid:none) Branchiostoma belcheri ubiquitin m... 95 2e-18
AY752852_1(AY752852|pid:none) Culicoides sonorensis clone CsUB1 ... 95 2e-18
AB003730_1(AB003730|pid:none) Homo sapiens gene for polyubiquiti... 95 2e-18
AF506022_1(AF506022|pid:none) Tribolium castaneum isolate pCPUb ... 95 2e-18
FN315482_1(FN315482|pid:none) Schistosoma japonicum isolate Anhu... 95 2e-18
EU433567_1(EU433567|pid:none) Monochamus alternatus ubiquitin mR... 95 2e-18
DQ363465_1(DQ363465|pid:none) Ictalurus punctatus clone C153BB02... 95 2e-18
BC045004_1(BC045004|pid:none) Xenopus laevis similar to ubiquiti... 95 2e-18
AY118702_1(AY118702|pid:none) Drosophila melanogaster AT20865 fu... 95 2e-18
FN315486_1(FN315486|pid:none) Schistosoma japonicum isolate Anhu... 95 2e-18
DQ019224_1(DQ019224|pid:none) Gracilaria lemaneiformis ubiquitin... 95 2e-18
AB036060_1(AB036060|pid:none) Oncorhynchus mykiss mRNA for ubiqu... 95 2e-18
AF517848_1(AF517848|pid:none) Griffithsia japonica isolate Gj526... 95 2e-18
AK300882_1(AK300882|pid:none) Homo sapiens cDNA FLJ51326 complet... 95 2e-18
BC006680_1(BC006680|pid:none) Mus musculus ubiquitin C, mRNA (cD... 95 2e-18
FN316688_1(FN316688|pid:none) Schistosoma japonicum isolate Anhu... 95 2e-18
BT057945_1(BT057945|pid:none) Salmo salar clone ssal-rgf-504-035... 95 2e-18
AY819759_1(AY819759|pid:none) Homo sapiens ubiquitin C splice va... 95 2e-18
BC021837_1(BC021837|pid:none) Mus musculus ubiquitin C, mRNA (cD... 95 2e-18
FN315483_1(FN315483|pid:none) Schistosoma japonicum isolate Anhu... 95 2e-18
AB032025_1(AB032025|pid:none) Canis lupus familiaris mRNA for ub... 95 2e-18
AY099133_1(AY099133|pid:none) Cercomonas edax isolate pub5 polyu... 95 2e-18
AF321441_1(AF321441|pid:none) Galleria mellonella polyubiquitin ... 95 2e-18
AB122067_1(AB122067|pid:none) Crassostrea gigas mRNA for polyubi... 95 2e-18
AE014134_1952(AE014134|pid:none) Drosophila melanogaster chromos... 95 2e-18
AK003190_1(AK003190|pid:none) Mus musculus 18-day embryo whole b... 95 2e-18
D63791_1(D63791|pid:none) Homo sapiens UbC gene for polyubiquiti... 95 2e-18
AK291539_1(AK291539|pid:none) Homo sapiens cDNA FLJ75516 complet... 95 2e-18
AL117514_1(AL117514|pid:none) Homo sapiens mRNA; cDNA DKFZp434K0... 95 2e-18
DQ216238_1(DQ216238|pid:none) Taeniopygia guttata clone 0058P004... 95 2e-18
EU558350_1(EU558350|pid:none) Phoronis muelleri putative ubiquit... 95 2e-18
BC114001_1(BC114001|pid:none) Bos taurus polyubiquitin, mRNA (cD... 95 2e-18
BC019850_1(BC019850|pid:none) Mus musculus ubiquitin B, mRNA (cD... 95 2e-18
BC093445_1(BC093445|pid:none) Homo sapiens ubiquitin C, mRNA (cD... 95 2e-18
AK007273_1(AK007273|pid:none) Mus musculus adult male testis cDN... 95 2e-18
BT079002_1(BT079002|pid:none) Esox lucius clone eluc-evq-516-246... 95 2e-18
AB009010_1(AB009010|pid:none) Homo sapiens UbC1 mRNA for polyubi... 95 2e-18
AY072292_1(AY072292|pid:none) Spodoptera frugiperda ribosomal pr... 95 2e-18
S11296(S11296)polyubiquitin (clone arf3) - mouse (fragment) 95 2e-18
AF348700_1(AF348700|pid:none) Homo sapiens ubiquitin A-52 residu... 95 2e-18
DQ673439_1(DQ673439|pid:none) Diaphorina citri putative ubiquiti... 95 2e-18
AY394942_1(AY394942|pid:none) Danio rerio clone RK046A2G11 ubiqu... 95 2e-18
BC167447_1(BC167447|pid:none) Danio rerio zgc:172187, mRNA (cDNA... 95 2e-18
D63782_1(D63782|pid:none) Cricetulus sp. gene for polyubiquitin,... 95 2e-18
AK013873_1(AK013873|pid:none) Mus musculus 12 days embryo head c... 95 2e-18
DQ216246_1(DQ216246|pid:none) Taeniopygia guttata clone 0058P001... 95 2e-18
EF473650_1(EF473650|pid:none) Sus scrofa ubiquitin B (UBB) gene,... 95 2e-18
AK168448_1(AK168448|pid:none) Mus musculus 17 days embryo kidney... 95 2e-18
AL953908_5(AL953908|pid:none) Zebrafish DNA sequence from clone ... 95 2e-18
FN316697_1(FN316697|pid:none) Schistosoma japonicum isolate Anhu... 95 2e-18
BC054976_1(BC054976|pid:none) Xenopus laevis ubiquitin C, mRNA (... 95 2e-18
DQ216234_1(DQ216234|pid:none) Taeniopygia guttata clone 0058P001... 95 2e-18
DQ445503_1(DQ445503|pid:none) Graphocephala atropunctata isolate... 95 2e-18
AY732488_1(AY732488|pid:none) Homo sapiens ubiquitin C splice va... 95 2e-18
I45964(I45964) polyubiquitin - bovine (fragment) &M62428_1(M624... 95 2e-18
BT058428_1(BT058428|pid:none) Salmo salar clone Contig656 Ubiqui... 95 2e-18
CR940347_507(CR940347|pid:none) Theileria annulata strain Ankara... 95 2e-18
FN320998_1(FN320998|pid:none) Schistosoma japonicum isolate Anhu... 95 2e-18
DQ216239_1(DQ216239|pid:none) Taeniopygia guttata clone 0058P004... 95 2e-18
L13783_1(L13783|pid:none) Bovine viral diarrhea virus p125 prote... 95 2e-18
BT075650_1(BT075650|pid:none) Osmerus mordax clone omor-rgc-508-... 95 2e-18
AF285161_1(AF285161|pid:none) Mus musculus cell-line C3H/He poly... 95 2e-18
AF045474_1(AF045474|pid:none) Schistosoma mansoni polyubiquitin ... 95 2e-18
X94621_1(X94621|pid:none) C.alpestris ubiquitin gene. 95 2e-18
AY254344_1(AY254344|pid:none) Schistosoma japonicum polyubiquiti... 95 2e-18
X08013_1(X08013|pid:none) Chinese hamster mRNA for ubiquitin. 95 2e-18
M17597_1(M17597|pid:none) Human poly-ubiquitin mRNA, complete cds. 95 2e-18
BC080583_1(BC080583|pid:none) Homo sapiens cDNA clone IMAGE:2822... 95 2e-18
D83208_1(D83208|pid:none) Cavia cobaya mRNA for ubiquitin, compl... 95 2e-18
DQ216250_1(DQ216250|pid:none) Taeniopygia guttata clone 0058P002... 95 2e-18
EU247124_1(EU247124|pid:none) Lycosa singoriensis 60S ribosomal ... 95 2e-18
A62334_1(A62334|pid:none) Sequence 22 from Patent WO9712992. &A... 95 2e-18
DQ420617_1(DQ420617|pid:none) Anser anser ubiquitin C II mRNA, c... 95 2e-18
AE014134_744(AE014134|pid:none) Drosophila melanogaster chromoso... 95 2e-18
JC5226(JC5226) ubiquitin / ribosomal protein CEP52 - Acropora mi... 95 2e-18
BT048991_1(BT048991|pid:none) Salmo salar clone ssal-evf-534-259... 95 2e-18
AF361365_1(AF361365|pid:none) Oncorhynchus mykiss polyubiquitin ... 95 2e-18
X02650_1(X02650|pid:none) Chicken mRNA for ubiquitin. 95 2e-18
AJ388512_1(AJ388512|pid:none) Canis familiaris mRNA for ubiquiti... 95 2e-18
M62429_1(M62429|pid:none) Bovine polyubiquitin mRNA, 3' end, clo... 95 2e-18
U61404_1(U61404|pid:none) Manduca sexta polyubiquitin gene, 5' r... 95 2e-18
AY752793_1(AY752793|pid:none) Culicoides sonorensis clone CsARU ... 95 2e-18
BT073019_1(BT073019|pid:none) Oncorhynchus mykiss clone omyk-evn... 95 2e-18
D17296_1(D17296|pid:none) Rattus norvegicus mRNA for polyubiquit... 95 2e-18
AM049143_1(AM049143|pid:none) Dascillus cervinus mRNA for riboso... 95 2e-18
AF517849_1(AF517849|pid:none) Griffithsia japonica isolate Gj532... 95 2e-18
BT043771_1(BT043771|pid:none) Salmo salar clone HM6_1209 ubiquit... 95 2e-18
M11691_1(M11691|pid:none) Synthetic beta-galactosidase/mouse ubi... 95 2e-18
FN316696_1(FN316696|pid:none) Schistosoma japonicum isolate Anhu... 95 2e-18
AB089615_1(AB089615|pid:none) Gorilla gorilla UbC gene for polyu... 95 2e-18
AB099044_1(AB099044|pid:none) Bos taurus mRNA for similar to pol... 95 2e-18
AK127995_1(AK127995|pid:none) Homo sapiens cDNA FLJ46113 fis, cl... 95 2e-18
AY748811_1(AY748811|pid:none) Thaumatomonas sp. DDM-2005 polyubi... 95 2e-18
AF104025_1(AF104025|pid:none) Bovine viral diarrhea virus-2 subg... 95 2e-18
A29584(A29584) ubiquitin precursor - pig (fragment) &M18159_1(M... 95 2e-18
BT058528_1(BT058528|pid:none) Salmo salar clone Contig1643 Ubiqu... 95 2e-18
FN357410_7(FN357410|pid:none) Schistosoma mansoni genome sequenc... 95 2e-18
DQ216243_1(DQ216243|pid:none) Taeniopygia guttata clone 0058P001... 95 2e-18
L19056_1(L19056|pid:none) Artemia franciscana ubiquitin mRNA, pa... 95 2e-18
EU306853_1(EU306853|pid:none) Drosophila silvestris clone sv3E-T... 95 2e-18
UQWO7A(S13136) ubiquitin / ribosomal protein S27a - tobacco horn... 95 2e-18
DQ216252_1(DQ216252|pid:none) Taeniopygia guttata clone 0058P000... 95 2e-18
EF633956_1(EF633956|pid:none) Ornithodoros parkeri clone OP-73 u... 95 2e-18
AK056939_1(AK056939|pid:none) Homo sapiens cDNA FLJ32377 fis, cl... 95 2e-18
AB003731_1(AB003731|pid:none) Cricetulus griseus gene for polyub... 95 2e-18
DQ216232_1(DQ216232|pid:none) Taeniopygia guttata clone 0058P006... 95 2e-18
AY891423_1(AY891423|pid:none) Synthetic construct Homo sapiens c... 95 2e-18
FN323975_1(FN323975|pid:none) Schistosoma japonicum isolate Anhu... 95 2e-18
AE014296_755(AE014296|pid:none) Drosophila melanogaster chromoso... 95 2e-18
DQ278173_1(DQ278173|pid:none) Theileria lestoquardi clone 34 unk... 95 2e-18
A31560(A31560) polyuciquitin - fruit fly (Drosophila melanogaste... 95 2e-18
DQ216235_1(DQ216235|pid:none) Taeniopygia guttata clone 0058P004... 95 2e-18
FN321000_1(FN321000|pid:none) Schistosoma japonicum isolate Anhu... 95 2e-18
BC103477_1(BC103477|pid:none) Rattus norvegicus ubiquitin C, mRN... 95 2e-18
BT076264_1(BT076264|pid:none) Caligus rogercresseyi clone crog-e... 95 2e-18
AY666015_57(AY666015|pid:none) Grouper iridovirus, complete geno... 95 2e-18
FN315485_1(FN315485|pid:none) Schistosoma japonicum isolate Anhu... 95 2e-18
AY099140_1(AY099140|pid:none) Cercomonas ATCC50316 isolate pub2 ... 94 2e-18
(Q8SWD4) RecName: Full=Ubiquitin; Flags: Precursor; &AL590442_7... 94 2e-18
BT078470_1(BT078470|pid:none) Lepeophtheirus salmonis Pacific fo... 94 2e-18
BT046483_1(BT046483|pid:none) Salmo salar clone ssal-evd-569-157... 94 2e-18
DQ517325_1(DQ517325|pid:none) Pectinaria gouldii ubiquitin/ribos... 94 2e-18
AM040015_1(AM040015|pid:none) Micromalthus debilis mRNA for ubiq... 94 2e-18
AM040016_1(AM040016|pid:none) Timarcha balearica mRNA for ubiqui... 94 2e-18
AY771321_1(AY771321|pid:none) Scleronephthya gracillimum ubuiqui... 94 2e-18
AY864330_26(AY864330|pid:none) Chrysodeixis chalcites nucleopoly... 94 2e-18
A49768(A49768) polyubiquitin - sea urchin (Strongylocentrotus pu... 94 2e-18
AY318871_96(AY318871|pid:none) Canarypox virus strain ATCC VR-11... 94 2e-18
DQ673413_1(DQ673413|pid:none) Diaphorina citri putative ubiquiti... 94 2e-18
AY099142_1(AY099142|pid:none) Cercomonas ATCC50316 isolate pub4 ... 94 2e-18
AY101385_1(AY101385|pid:none) Cercomonas ATCC50316 polyubiquitin... 94 2e-18
BT076736_1(BT076736|pid:none) Caligus rogercresseyi clone crog-e... 94 2e-18
AY099144_1(AY099144|pid:none) Cercomonas ATCC50316 isolate pub6 ... 94 2e-18
AY099143_1(AY099143|pid:none) Cercomonas ATCC50316 isolate pub5 ... 94 2e-18
(P23398) RecName: Full=Ubiquitin; 94 2e-18
AF064593_1(AF064593|pid:none) Schistosoma japonicum ubiquitin/ri... 94 3e-18
M22214_1(M22214|pid:none) Synthetic human ubiquitin gene (Phe4- ... 94 3e-18
AB170649_1(AB170649|pid:none) Macaca fascicularis brain cDNA clo... 94 3e-18
AF104020_1(AF104020|pid:none) Bovine viral diarrhea virus-2 subg... 94 3e-18
BT058181_1(BT058181|pid:none) Salmo salar clone Contig1385 Ubiqu... 94 3e-18
BT043890_1(BT043890|pid:none) Salmo salar clone HM4_3735 ribosom... 94 3e-18
AB098891_1(AB098891|pid:none) Bos taurus mRNA for similar to ubi... 94 3e-18
BT058174_1(BT058174|pid:none) Salmo salar clone Contig1232 Ubiqu... 94 3e-18
DQ216251_1(DQ216251|pid:none) Taeniopygia guttata clone 0063P002... 94 3e-18
AK018706_1(AK018706|pid:none) Mus musculus adult male kidney cDN... 94 3e-18
AF104026_1(AF104026|pid:none) Bovine viral diarrhea virus-2 subg... 94 3e-18
AB291582_1(AB291582|pid:none) Solea senegalensis rpS27a mRNA for... 94 3e-18
BT073985_1(BT073985|pid:none) Oncorhynchus mykiss clone omyk-evo... 94 3e-18
BC157791_1(BC157791|pid:none) Xenopus tropicalis hypothetical pr... 94 3e-18
(P0C274) RecName: Full=Ubiquitin; &(P62972) RecName: Fu &(P6297... 94 3e-18
AF104023_1(AF104023|pid:none) Bovine viral diarrhea virus-2 subg... 94 3e-18
AF104024_1(AF104024|pid:none) Bovine viral diarrhea virus-2 subg... 94 3e-18
AM040011_1(AM040011|pid:none) Agriotes lineatus mRNA for ubiquit... 94 3e-18
BT083357_1(BT083357|pid:none) Anoplopoma fimbria clone afim-evh-... 94 3e-18
BT049653_1(BT049653|pid:none) Salmo salar clone ssal-evd-544-065... 94 3e-18
AF104021_1(AF104021|pid:none) Bovine viral diarrhea virus-2 subg... 94 3e-18
AB098769_1(AB098769|pid:none) Bos taurus mRNA for similar to pol... 94 3e-18
AB111967_1(AB111967|pid:none) Bovine viral diarrhea virus T-20 g... 94 3e-18
Z22614_3(Z22614|pid:none) T.pyriformis polyubiquitin and 5S rRNA... 94 3e-18
BC053371_1(BC053371|pid:none) Homo sapiens ribosomal protein S27... 94 3e-18
M24507_1(M24507|pid:none) Synthetic human ubiquitin (UBCEP80) ge... 94 3e-18
S29238(S29238;S55459;S21384) ubiquitin - Entamoeba histolytica ... 94 3e-18
AF104022_1(AF104022|pid:none) Bovine viral diarrhea virus-2 subg... 94 3e-18
U67931_1(U67931|pid:none) Gallus gallus ubiquitin/ribosomal prot... 94 3e-18
AY751539_1(AY751539|pid:none) Cloning vector pHUE, complete sequ... 94 3e-18
AJ937554_1(AJ937554|pid:none) Collozoum inerme partial pub gene,... 94 3e-18
AJ965273_1(AJ965273|pid:none) Polyplastron multivesiculatum part... 94 4e-18
AJ965270_1(AJ965270|pid:none) Polyplastron multivesiculatum part... 94 4e-18
M22218_1(M22218|pid:none) Synthetic human ubiquitin gene (Thr66-... 94 4e-18
AJ965274_1(AJ965274|pid:none) Polyplastron multivesiculatum part... 94 4e-18
EU428780_1(EU428780|pid:none) Plutella xylostella ubiquitin gene... 94 4e-18
M22217_1(M22217|pid:none) Synthetic human ubiquitin gene (Phe4- ... 94 4e-18
AF502248_1(AF502248|pid:none) Epinephelus coioides 40s ribosomal... 94 4e-18
AJ965271_1(AJ965271|pid:none) Polyplastron multivesiculatum part... 94 4e-18
AM502227_95(AM502227|pid:none) Leishmania infantum chromosome 9. 93 5e-18
AM494972_376(AM494972|pid:none) Leishmania braziliensis chromoso... 93 5e-18
AM494963_268(AM494963|pid:none) Leishmania braziliensis chromoso... 93 5e-18
FJ227128_48(FJ227128|pid:none) Euproctis pseudoconspersa nucleop... 93 5e-18
CR382126_774(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 93 5e-18
JT0492(JT0492) ubiquitin 2 - Tetrahymena pyriformis (fragment) ... 93 5e-18
BT073770_1(BT073770|pid:none) Oncorhynchus mykiss clone omyk-evo... 93 5e-18
AY251805_1(AY251805|pid:none) Bigelowiella natans ubiquitin/ribo... 93 5e-18
AM910995_106(AM910995|pid:none) Plasmodium knowlesi strain H chr... 93 5e-18
AF003089_1(AF003089|pid:none) Tetrahymena vorax ubiquitin mRNA, ... 93 5e-18
JC5489(JC5489) polyubiquitin 5 - Tetrahymena thermophila &U4656... 93 5e-18
(O46543) RecName: Full=Ubiquitin; 93 5e-18
AY251803_1(AY251803|pid:none) Bigelowiella natans ubiquitin/ribo... 93 5e-18
AY521661_1(AY521661|pid:none) Pseudopleuronectes americanus 40S ... 93 5e-18
AF539999_151(AF539999|pid:none) Mamestra configurata nucleopolyh... 93 7e-18
AY251806_1(AY251806|pid:none) Bigelowiella natans ubiquitin/ribo... 93 7e-18
AJ965275_1(AJ965275|pid:none) Polyplastron multivesiculatum part... 93 7e-18
AY099118_1(AY099118|pid:none) Chlorarachnion CCMP621 isolate pub... 93 7e-18
AY099119_1(AY099119|pid:none) Chlorarachnion CCMP621 isolate pub... 93 7e-18
AM040013_1(AM040013|pid:none) Curculio glandium partial mRNA for... 93 7e-18
S25154(S25154)ubiquitin / ribosomal protein CEP52 - Leishmania m... 93 7e-18
AJ965272_1(AJ965272|pid:none) Polyplastron multivesiculatum part... 93 7e-18
EF035042_123(EF035042|pid:none) Spodoptera frugiperda MNPV isola... 93 7e-18
M21581_1(M21581|pid:none) Synthetic human ubiquitin gene (Thr14-... 93 7e-18
AY251793_1(AY251793|pid:none) Bigelowiella natans ubiquitin/acti... 93 7e-18
X74405_5(X74405|pid:none) Artemia franciscana gene for polyubiqu... 93 7e-18
U45317_1(U45317|pid:none) Litomosoides sigmodontis ubiquitin c-t... 93 7e-18
AY552058_1(AY552058|pid:none) Aedes aegypti ribosomal protein S2... 92 9e-18
EF134146_1(EF134146|pid:none) Karlodinium micrum strain CCMP1975... 92 9e-18
S18535(S18535) ubiquitin / ribosomal protein CEP52 - Tetrahymena... 92 9e-18
AY748808_1(AY748808|pid:none) Sphaerozoum italicum polyubiquitin... 92 9e-18
EF134217_1(EF134217|pid:none) Noctiluca scintillans isolate Nsc-... 92 9e-18
M22216_1(M22216|pid:none) Synthetic human ubiquitin gene (Phe4- ... 92 9e-18
S34334(C72790;S34334) ubiquitin - Leishmania tarentolae &X73120... 92 9e-18
M10939_1(M10939|pid:none) Human ubiquitin mRNA, 3' end. 92 9e-18
B27806(B27806) ubiquitin (clone lambda229) - slime mold (Dictyos... 92 9e-18
AM269955_93(AM269955|pid:none) Aspergillus niger contig An01c008... 92 9e-18
AF321438_1(AF321438|pid:none) Galleria mellonella polyubiquitin ... 92 9e-18
AY748807_1(AY748807|pid:none) Collozoum sp. DDM-2005 polyubiquit... 92 9e-18
AM087934_1(AM087934|pid:none) Chorocaris chacei mitochondrial pa... 92 9e-18
AK341054_1(AK341054|pid:none) Acyrthosiphon pisum ACYPI000086 mR... 92 9e-18
(Q05550) RecName: Full=Ubiquitin; &Z14232_1(Z14232|pid:none) 92 9e-18
(P20685) RecName: Full=Ubiquitin; 92 9e-18
M96687_1(M96687|pid:none) Bovine viral diarrhea virus strain Osl... 92 9e-18
M23754_1(M23754|pid:none) D.discoideum ubiquitin mRNA, complete ... 92 9e-18
AY521625_102(AY521625|pid:none) Singapore grouper iridovirus, co... 92 1e-17
AM117573_1(AM117573|pid:none) Paralvinella grasslei partial gene... 92 1e-17
Z22614_1(Z22614|pid:none) T.pyriformis polyubiquitin and 5S rRNA... 92 1e-17
AY748809_1(AY748809|pid:none) Stauracon pallidus polyubiquitin (... 92 1e-17
FN322451_1(FN322451|pid:none) Schistosoma japonicum isolate Anhu... 92 1e-17
AK340525_1(AK340525|pid:none) Acyrthosiphon pisum ACYPI006410 mR... 92 1e-17
M33014_1(M33014|pid:none) D.melanogaster ubiquitin gene, 5' end. 92 1e-17
AM087928_1(AM087928|pid:none) Nereis diversicolor mitochondrial ... 92 1e-17
M33016_1(M33016|pid:none) D.melanogaster ubiquitin gene, 5' end. 92 1e-17
UQNC(S05323) polyubiquitin 4 - Neurospora crassa &X13140_1(X131... 92 1e-17
AK339919_1(AK339919|pid:none) Acyrthosiphon pisum ACYPI007765 mR... 92 1e-17
AM040014_1(AM040014|pid:none) Eucinetus sp. APV-2005 mRNA for ub... 92 1e-17
AJ575140_1(AJ575140|pid:none) Sordaria macrospora partial smu599... 92 1e-17
AF469060_1(AF469060|pid:none) Heterodera glycines ubiquitin exte... 92 1e-17
CR380948_61(CR380948|pid:none) Candida glabrata strain CBS138 ch... 92 1e-17
AM231626_1(AM231626|pid:none) Bovine viral diarrhea virus partia... 92 1e-17
AL031854_8(AL031854|pid:none) S.pombe chromosome II cosmid c337.... 92 1e-17
BT073122_1(BT073122|pid:none) Oncorhynchus mykiss clone omyk-evn... 92 1e-17
S53719(S53719;S73107;S71069)polyubiquitin 6 - red alga (Gracilar... 92 1e-17
L31492_1(L31492|pid:none) Caenorhabditis elegans ubiquitin/ribos... 92 1e-17
EU153190_1(EU153190|pid:none) Heterocapsa triquetra clone Htr-cD... 92 1e-17
AF322415_1(AF322415|pid:none) Synthetic construct HPV type 6b hu... 92 1e-17
Y12081_1(Y12081|pid:none) Suberites domuncula mRNA for polyubiqu... 92 1e-17
AY286305_1(AY286305|pid:none) Heterodera schachtii ubiquitin ext... 92 1e-17
A27806(A27806) polyubiquitin 5 (clone pLK229) - slime mold (Dict... 92 1e-17
EU139240_1(EU139240|pid:none) Flustra foliacea ubiquinated putat... 92 1e-17
AF323508_1(AF323508|pid:none) Synthetic construct HPV type 6b hu... 92 1e-17
DQ115333_1(DQ115333|pid:none) Caenorhabditis remanei ubiquitin p... 92 1e-17
M23749_1(M23749|pid:none) D.discoideum ubiquitin mRNA, complete ... 92 1e-17
AF481059_1(AF481059|pid:none) Aplysia californica ubiquitin/ribo... 92 1e-17
M19666_1(M19666|pid:none) Slime mold (D.discoideum) ubiquitin ge... 92 1e-17
X87156_1(X87156|pid:none) Acanthamoeba sp. 4b3 polyubiquitin gene. 92 1e-17
S43306(S43306)polyubiquitin 6 - Geodia cydonium 92 1e-17
AY957885_1(AY957885|pid:none) Gracilaria lemaneiformis polyubiqu... 92 1e-17
AY961529_1(AY961529|pid:none) Lysiphlebus testaceipes ribosomal ... 92 1e-17
S32020(S32020) polyubiquitin 6 - Geodia cydonium &X70917_1(X709... 92 1e-17
U43128_1(U43128|pid:none) Naegleria fowleri ubiquitin mRNA, part... 92 1e-17
AY857455_1(AY857455|pid:none) Suberites domuncula L40-ubiquitin ... 92 1e-17
B34080(B34080)polyubiquitin 5 (clone DCUB19) - slime mold (Dicty... 92 1e-17
CQ904363_1(CQ904363|pid:none) Sequence 1 from Patent WO2004085466. 92 1e-17
AY485340_1(AY485340|pid:none) Schistosoma mansoni ubiquitin mRNA... 92 1e-17
BT073733_1(BT073733|pid:none) Oncorhynchus mykiss clone omyk-evo... 92 1e-17
DQ504428_22(DQ504428|pid:none) Clanis bilineata nucleopolyhedros... 92 1e-17
T16144(T16144) ubiquitin - Caenorhabditis elegans &U23172_1(U23... 92 1e-17
AB045758_1(AB045758|pid:none) Physarum polycephalum ppub4 mRNA f... 91 2e-17
S40611(S40611;S34707) polyubiquitin 5 - Volvox carteri &X74214_... 91 2e-17
AY452184_1(AY452184|pid:none) Plasmodiophora brassicae polyubiqu... 91 2e-17
AJ007936_1(AJ007936|pid:none) Gibberella pulicaris ubi1 gene. &... 91 2e-17
AE016816_144(AE016816|pid:none) Ashbya gossypii (= Eremothecium ... 91 2e-17
CU928169_242(CU928169|pid:none) Kluyveromyces thermotolerans str... 91 2e-17
Y17004_1(Y17004|pid:none) Suberites domuncula mRNA for monoubiqu... 91 2e-17
A29456(A29456;B29456;S48386;S38172) ubiquitin / ribosomal protei... 91 2e-17
CR380950_216(CR380950|pid:none) Candida glabrata strain CBS138 c... 91 2e-17
X01474_1(X01474|pid:none) Yeast gene fragment for polyubiquitin ... 91 2e-17
AB045756_1(AB045756|pid:none) Physarum polycephalum ppub2 mRNA f... 91 2e-17
(P0C033) RecName: Full=Ubiquitin-like protein 1; 91 2e-17
AF056623_1(AF056623|pid:none) Magnaporthe grisea strain Guy-11 u... 91 2e-17
FN392322_794(FN392322|pid:none) Pichia pastoris GS115 chromosome... 91 2e-17
FJ527489_1(FJ527489|pid:none) Plutella xylostella isolate Ub1 ub... 91 2e-17
AF056625_1(AF056625|pid:none) Magnaporthe grisea strain Guy-11 p... 91 2e-17
CU928179_320(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 91 2e-17
DQ914562_1(DQ914562|pid:none) Porphyra yezoensis polyubiquitin (... 91 2e-17
BT074005_1(BT074005|pid:none) Oncorhynchus mykiss clone omyk-evo... 91 2e-17
AP007155_1027(AP007155|pid:none) Aspergillus oryzae RIB40 genomi... 91 2e-17
Y17558_1(Y17558|pid:none) Candida albicans UB14 gene. 91 2e-17
(P13117) RecName: Full=Ubiquitin; 91 2e-17
AJ243800_3(AJ243800|pid:none) Kluyveromyces lactis rim101 (parti... 91 2e-17
CU928179_267(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 91 2e-17
AY452182_1(AY452182|pid:none) Plasmodiophora brassicae polyubiqu... 91 2e-17
AK340297_1(AK340297|pid:none) Acyrthosiphon pisum ACYPI000076 mR... 91 2e-17
DQ837165_21(DQ837165|pid:none) Ecotropis obliqua NPV strain A1, ... 91 2e-17
U32627_1(U32627|pid:none) Candida albicans ubiquitin precursor (... 91 2e-17
AB045757_1(AB045757|pid:none) Physarum polycephalum ppub3 mRNA f... 91 2e-17
AJ937553_1(AJ937553|pid:none) Collozoum inerme partial pub gene,... 91 2e-17
EU139195_1(EU139195|pid:none) Flustra foliacea ubiquinated putat... 91 2e-17
UQBY(D29456;S64790;B22696;A22696) polyubiquitin 5 - yeast (Sacch... 91 2e-17
FM992690_680(FM992690|pid:none) Candida dubliniensis CD36 chromo... 91 2e-17
DQ914563_1(DQ914563|pid:none) Porphyra yezoensis polyubiquitin (... 91 2e-17
CR382131_778(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 91 2e-17
EU302560_1(EU302560|pid:none) Lineus viridis ribosomal protein r... 91 2e-17
AE017341_332(AE017341|pid:none) Cryptococcus neoformans var. neo... 91 2e-17
U28012_1(U28012|pid:none) Trichomonas vaginalis ubiquitin dimer ... 91 2e-17
AB045755_1(AB045755|pid:none) Physarum polycephalum ppub1 mRNA f... 91 2e-17
AJ243802_2(AJ243802|pid:none) Kluyveromyces lactis ORF YDR183W (... 91 3e-17
CR382132_415(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 91 3e-17
AJ416499_1(AJ416499|pid:none) Pleurotus ostreatus partial mRNA f... 91 3e-17
AF056624_1(AF056624|pid:none) Magnaporthe grisea strain Guy-11 u... 91 3e-17
AF063866_144(AF063866|pid:none) Melanoplus sanguinipes entomopox... 91 3e-17
CR382139_690(CR382139|pid:none) Debaryomyces hansenii strain CBS... 91 3e-17
(Q55DZ5) RecName: Full=Ubiquitin; 91 3e-17
AP007155_821(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 91 3e-17
AM231624_1(AM231624|pid:none) Bovine viral diarrhea virus partia... 91 3e-17
S42643(S42643)ubiquitin / ribosomal protein S27a - potato (fragm... 91 3e-17
AP008211_348(AP008211|pid:none) Oryza sativa (japonica cultivar-... 91 3e-17
AM231627_1(AM231627|pid:none) Bovine viral diarrhea virus partia... 91 3e-17
AC141106_28(AC141106|pid:none) Medicago truncatula clone mth2-33... 91 3e-17
U03707_1(U03707|pid:none) Quinqueloculina seminulum ubiquitin ge... 91 3e-17
AF321456_1(AF321456|pid:none) Bovine viral diarrhea virus-1 isol... 91 3e-17
AF321454_1(AF321454|pid:none) Bovine viral diarrhea virus-1 isol... 91 3e-17
(P49634) RecName: Full=Ubiquitin; 91 3e-17
U17246_2(U17246|pid:none) Saccharomyces cerevisiae chromosome XI... 91 3e-17
AY571670_1(AY571670|pid:none) Gromia oviformis polyubiquitin gen... 91 3e-17
AF060501_1(AF060501|pid:none) Botryotinia fuckeliana polyubiquit... 91 3e-17
(P42740) RecName: Full=Ubiquitin; 91 3e-17
CU928175_164(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 91 3e-17
DQ975458_1(DQ975458|pid:none) Capsicum annuum ubiquitin extensio... 91 3e-17
AE016819_518(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 91 3e-17
S62909(S62909;S12577) ubiquitin precursor - Tetrahymena pyriform... 91 3e-17
AB021972_1(AB021972|pid:none) Bombyx mori UBI1 mRNA for ubiquiti... 91 3e-17
AF031628_1(AF031628|pid:none) Schizophyllum commune polyubiquiti... 91 3e-17
AM270080_13(AM270080|pid:none) Aspergillus niger contig An04c019... 91 3e-17
AM231622_1(AM231622|pid:none) Bovine viral diarrhea virus gene f... 91 3e-17
AF321458_1(AF321458|pid:none) Bovine viral diarrhea virus-1 isol... 91 3e-17
(P14792) RecName: Full=Ubiquitin; &(P59669) RecName: Fu &EF1015... 91 3e-17
AY961507_1(AY961507|pid:none) Lysiphlebus testaceipes ribosomal ... 91 3e-17
Y12082_1(Y12082|pid:none) Suberites domuncula mRNA for polyubiqu... 91 3e-17
AE017351_259(AE017351|pid:none) Cryptococcus neoformans var. neo... 91 3e-17
CR380953_349(CR380953|pid:none) Candida glabrata strain CBS138 c... 91 3e-17
AY314947_1(AY314947|pid:none) Herdmania curvata clone 4284 ribos... 91 3e-17
AF400203_1(AF400203|pid:none) Spodoptera frugiperda ribosomal pr... 91 3e-17
AF321457_1(AF321457|pid:none) Bovine viral diarrhea virus-1 isol... 91 3e-17
AY229987_51(AY229987|pid:none) Cryptophlebia leucotreta granulov... 91 3e-17
AF250284_180(AF250284|pid:none) Amsacta moorei entomopoxvirus, c... 91 3e-17
CQ918486_1(CQ918486|pid:none) Sequence 6 from Patent WO2004097011. 91 3e-17
AJ698912_1(AJ698912|pid:none) Fusarium fujikuroi partial mRNA fo... 91 3e-17
AC115584_9(AC115584|pid:none) Dictyostelium discoideum chromosom... 91 3e-17
CS362623_1(CS362623|pid:none) Sequence 3 from Patent WO2006073320. 91 3e-17
EU677732_1(EU677732|pid:none) Caenorhabditis brenneri clone 13D4... 91 3e-17
Z28649_1(Z28649|pid:none) Acetabularia cliftonii gene for polyub... 91 3e-17
DQ011576_1(DQ011576|pid:none) Euphorbia characias polyubiquitin ... 91 3e-17
AL662988_4(AL662988|pid:none) Oryza sativa genomic DNA, chromoso... 91 3e-17
AY954394_1(AY954394|pid:none) Oryza sativa (japonica cultivar-gr... 91 3e-17
AF429429_1(AF429429|pid:none) Olea europaea polyubiquitin OUB1 m... 91 3e-17
AY303168_2(AY303168|pid:none) Degron tagging vector pSMUG2+ beta... 91 3e-17
AF060232_1(AF060232|pid:none) Botryotinia fuckeliana monoubiquit... 91 3e-17
CS362629_1(CS362629|pid:none) Sequence 9 from Patent WO2006073320. 91 3e-17
UQUTC(S00510) ubiquitin precursor - Trypanosoma cruzi (fragment)... 91 3e-17
AF175521_1(AF175521|pid:none) Emericella nidulans UBI1 (ubi1) mR... 91 3e-17
CQ918481_1(CQ918481|pid:none) Sequence 1 from Patent WO2004097011. 91 3e-17
AB090878_1(AB090878|pid:none) Aster tripolium mRNA for polyubiqu... 91 3e-17
AE016820_243(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 91 3e-17
M31426_1(M31426|pid:none) Synthetic yeast (S.cerevisiae) ubiquit... 91 3e-17
UQKM(S06598;S19543;S21687) ubiquitin / ribosomal protein CEP52 -... 91 3e-17
(P23324) RecName: Full=Ubiquitin; 91 3e-17
D12776_1(D12776|pid:none) Oryza sativa Japonica Group mRNA for p... 91 3e-17
(P19848) RecName: Full=Ubiquitin; &AB210844_1(AB210844|pid:none... 90 4e-17
AF081810_43(AF081810|pid:none) Lymantria dispar nucleopolyhedrov... 90 4e-17
X07451_1(X07451|pid:none) Trypanosoma cruzi ubiquitin gene. &X0... 90 4e-17
A63899_1(A63899|pid:none) Sequence 24 from Patent WO9723633. &C... 90 4e-17
S55244(S55244;S61069)polyubiquitin 4 - Arabidopsis thaliana 90 4e-17
(Q03919) RecName: Full=NEDD8-like protein RUB1; AltName: Full=Ub... 90 4e-17
EF101928_203(EF101928|pid:none) Acanthocystis turfacea Chlorella... 90 4e-17
X98063_1(X98063|pid:none) P.sylvestris mRNA for polyubiquitin. 90 4e-17
U03702_1(U03702|pid:none) Affinetrina eburnea ubiquitin gene, pa... 90 4e-17
AF061807_1(AF061807|pid:none) Elaeagnus umbellata polyubiquitin ... 90 6e-17
EU348739_1(EU348739|pid:none) Adonis aestivalis var. palaestina ... 90 6e-17
AF093505_1(AF093505|pid:none) Saccharum hybrid cultivar H32-8560... 90 6e-17
M74156_1(M74156|pid:none) Nicotiana sylvestris (clone 6PU4) pent... 90 6e-17
AM117576_1(AM117576|pid:none) Alvinella caudata partial gene for... 90 6e-17
UQFS(S03599)ubiquitin precursor - common sunflower (fragment) 90 6e-17
EU953492_1(EU953492|pid:none) Zea mays clone 1424191 unknown mRNA. 90 6e-17
AM466823_1(AM466823|pid:none) Vitis vinifera contig VV78X042351.... 90 6e-17
AL161503_16(AL161503|pid:none) Arabidopsis thaliana DNA chromoso... 90 6e-17
EF145452_1(EF145452|pid:none) Populus trichocarpa clone WS01124_... 90 6e-17
CP000592_120(CP000592|pid:none) Ostreococcus lucimarinus CCE9901... 90 6e-17
AB033601_1(AB033601|pid:none) Cucumis melo mRNA for polyubiquiti... 90 6e-17
M33018_1(M33018|pid:none) D.melanogaster ubiquitin gene, 5' end. 90 6e-17
AB005240_15(AB005240|pid:none) Arabidopsis thaliana genomic DNA,... 90 6e-17
JQ1728(JQ1728)ubiquitin precursor - Arabidopsis thaliana (fragme... 90 6e-17
EU436761_1(EU436761|pid:none) Sandersonia aurantiaca clone SAND7... 90 6e-17
EU586198_1(EU586198|pid:none) Malus x domestica cultivar Fuji po... 90 6e-17
DQ118117_1(DQ118117|pid:none) Lupinus albus polyubiquitin mRNA, ... 90 6e-17
BT052956_1(BT052956|pid:none) Medicago truncatula clone MTYFL_FM... 90 6e-17
AF499596_49(AF499596|pid:none) Phthorimaea operculella granulovi... 90 6e-17
AC152972_3(AC152972|pid:none) Oryza sativa (japonica cultivar-gr... 90 6e-17
AF502575_1(AF502575|pid:none) Musa acuminata ubiquitin (UBQ1) ge... 90 6e-17
U84969_1(U84969|pid:none) Arabidopsis thaliana ubiquitin (UBQ11)... 90 6e-17
CR954212_116(CR954212|pid:none) Ostreococcus tauri strain OTTH05... 90 6e-17
EU081898_1(EU081898|pid:none) Triticum aestivum polyubiquitin (W... 90 6e-17
AY375335_1(AY375335|pid:none) Gossypium barbadense fiber polyubi... 90 6e-17
AF502576_1(AF502576|pid:none) Musa acuminata ubiquitin (UBQ2) ge... 90 6e-17
AY042884_1(AY042884|pid:none) Arabidopsis thaliana Unknown prote... 90 6e-17
AF528678_1(AF528678|pid:none) Arabidopsis lyrata putative polyub... 90 6e-17
AF035383_1(AF035383|pid:none) Arabidopsis thaliana polyubiquitin... 90 6e-17
DQ887067_1(DQ887067|pid:none) Arachis hypogaea polyubiquitin 10 ... 90 6e-17
EF147813_1(EF147813|pid:none) Populus trichocarpa clone WS0125_D... 90 6e-17
BT061197_1(BT061197|pid:none) Zea mays full-length cDNA clone ZM... 90 6e-17
T12035(T12035) polyubiquitin 4.4 - kidney bean &U77939_1(U77939... 90 6e-17
EU952265_1(EU952265|pid:none) Zea mays clone 1273639 unknown mRNA. 90 6e-17
DQ793132_1(DQ793132|pid:none) Arabidopsis thaliana ubiquitin (UB... 90 6e-17
AM087931_1(AM087931|pid:none) Sabellaria alveolata mitochondrial... 90 6e-17
AY785814_1(AY785814|pid:none) Oryza sativa (indica cultivar-grou... 90 6e-17
EU586196_1(EU586196|pid:none) Malus x domestica cultivar Fuji po... 90 6e-17
CP001327_692(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 90 6e-17
AB018107_9(AB018107|pid:none) Arabidopsis thaliana genomic DNA, ... 90 6e-17
AF528705_1(AF528705|pid:none) Arabidopsis thaliana ecotype Lisse... 90 6e-17
>(Q54XV3) RecName: Full=NEDD8; AltName: Full=Ubiquitin-like protein
NEDD8; AltName: Full=Neddylin; Flags: Precursor;
Length = 77
Score = 153 bits (386), Expect = 4e-36
Identities = 77/77 (100%), Positives = 77/77 (100%)
Frame = +3
Query: 78 MLIKVKTLTGKEIEIDIDPTDKIQRIKERVEEKEGIPPSQQRLIFGGKQMGDDKPASEYS 257
MLIKVKTLTGKEIEIDIDPTDKIQRIKERVEEKEGIPPSQQRLIFGGKQMGDDKPASEYS
Sbjct: 1 MLIKVKTLTGKEIEIDIDPTDKIQRIKERVEEKEGIPPSQQRLIFGGKQMGDDKPASEYS 60
Query: 258 IEGGSVLHLVLALRGGL 308
IEGGSVLHLVLALRGGL
Sbjct: 61 IEGGSVLHLVLALRGGL 77
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 457,178,178
Number of extensions: 6673927
Number of successful extensions: 29906
Number of sequences better than 10.0: 1144
Number of HSP's gapped: 29853
Number of HSP's successfully gapped: 2137
Length of query: 203
Length of database: 1,051,180,864
Length adjustment: 122
Effective length of query: 81
Effective length of database: 656,320,666
Effective search space: 53161973946
Effective search space used: 53161973946
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
|
| PSORT |
|
| VS (DIR, S) |
3 |
| VH (FL, L) |
1 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |