| Homology vs DNA |
 Query= Contig-U12545-1 (Contig-U12545-1Q) /CSM_Contig/Contig-U12545-1Q.Seq.d
(1175 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ445171) Dictyostelium discoideum cDNA clone:ddv58m13, 3' ... 773 0.0 3
(BJ426344) Dictyostelium discoideum cDNA clone:ddv58m13, 5' ... 718 0.0 1
(BJ389483) Dictyostelium discoideum cDNA clone:dds18m21, 5' ... 311 0.0 4
(BJ402984) Dictyostelium discoideum cDNA clone:dds18m21, 3' ... 92 6e-14 1
(DW177109) 020424PEAA999118HT (PEAA) Young petunia seedlings... 46 1e-05 3
(EY152679) CBTN4480.b1_O16.ab1:P Triphysaria pusilla root ti... 46 7e-04 2
(EY132995) CBTH3833.b1_B24.ab1:P Triphysaria pusilla root ti... 46 9e-04 2
(EY150688) CBTN12762.b1_C23.ab1:P Triphysaria pusilla root t... 46 0.001 2
(EH011629) USDA-FP_184609 Lysiphlebus testaceipes adult whol... 46 0.003 2
(EH015522) USDA-FP_188114 Lysiphlebus testaceipes adult whol... 46 0.003 2
(EH013423) USDA-FP_186225 Lysiphlebus testaceipes adult whol... 46 0.003 2
(EH012875) USDA-FP_185732 Lysiphlebus testaceipes adult whol... 46 0.003 2
(EH010431) USDA-FP_183530 Lysiphlebus testaceipes adult whol... 46 0.003 2
(EH016196) USDA-FP_188721 Lysiphlebus testaceipes adult whol... 46 0.003 2
(EF094467) Acyrthosiphon pisum vasa-like protein (vasa) mRNA... 52 0.049 1
(AR319341) Sequence 1891 from patent US 6562958. 50 0.19 1
(EY452695) CBAZ6087.fwd CBAZ Tubifex tubifex Embryos and juv... 50 0.19 1
(CU468230) Acinetobacter baumannii str. SDF, complete genome. 50 0.19 1
(CU459141) Acinetobacter baumannii str. AYE, complete genome. 50 0.19 1
(CP000863) Acinetobacter baumannii ACICU, complete genome. 50 0.19 1
(CP000521) Acinetobacter baumannii ATCC 17978, complete genome. 50 0.19 1
(AP008971) Finegoldia magna ATCC 29328 DNA, complete genome. 36 0.37 2
(AC155099) Medicago truncatula chromosome 7 BAC clone mth2-1... 48 0.76 1
(AP010145) Lotus japonicus genomic DNA, clone: LjT32M01, TM0... 48 0.76 1
(CG928597) MBEDE55TRC mth2 Medicago truncatula genomic clone... 48 0.76 1
(DB753907) Apis mellifera head cDNA, RIKEN full-length enric... 48 0.76 1
(DB753020) Apis mellifera head cDNA, RIKEN full-length enric... 48 0.76 1
(DB752106) Apis mellifera head cDNA, RIKEN full-length enric... 48 0.76 1
(DB736733) Apis mellifera head cDNA, RIKEN full-length enric... 48 0.76 1
(CX533985) s13dNF0NE11MJ083_321733 Methyl Jasmonate-Elicited... 48 0.76 1
(BW594458) Lotus japonicus cDNA, clone: LjCa-001-CA12, 5' en... 48 0.76 1
(BI418105) LjNEST24f6r Lotus japonicus nodule library 5 and ... 48 0.76 1
(AW689339) NF018B01ST1F1000 Developing stem Medicago truncat... 48 0.76 1
(CR382126) Kluyveromyces lactis strain NRRL Y-1140 chromosom... 32 1.3 2
(AC178819) Strongylocentrotus purpuratus clone R3-22O15, WOR... 40 1.7 4
(DN294058) PL030015B20E09 cDNA from sexually mature hermapho... 40 2.3 2
(DN312326) PL06012B1E06 cDNA from juvenile hermaphodites Sch... 40 2.8 2
(BC157449) Xenopus laevis cDNA clone IMAGE:8328523, partial ... 46 3.0 1
(AF046043) Xenopus laevis DEAD box protein (VLG1) mRNA, comp... 46 3.0 1
(AC146126) Pan troglodytes BAC clone RP43-23E20 from chromos... 46 3.0 1
(AC073521) Homo sapiens BAC clone RP11-806J6 from 7, complet... 46 3.0 1
(AC151890) Callicebus moloch clone LB5-8L6, WORKING DRAFT SE... 46 3.0 1
(AC212605) Solanum lycopersicum chromosome 7 clone C07HBa000... 46 3.0 1
(AC202344) Medicago truncatula clone mth2-29k11, WORKING DRA... 46 3.0 1
(BH481778) BOGWT79TF BOGW Brassica oleracea genomic clone BO... 46 3.0 1
(DX944045) CHORI105-34E2.TR CHORI105.pEpiFOS5 Trypanosoma cr... 46 3.0 1
(DY546805) AGENCOURT_71292948 NICHD_XGC_Ov1 Xenopus laevis c... 46 3.0 1
(DY296219) IC0AAA8BF09RM1 CitNFL Citrus clementina cDNA 5', ... 46 3.0 1
(DY287002) IC0AAA66CE08RM1 CitNFL Citrus clementina cDNA 5',... 46 3.0 1
(DY266013) IC0AAA19AA06RM1 CitNFL Citrus clementina cDNA 5',... 46 3.0 1
(CX071980) UCRCS08_25C10_g Parent Washington Navel Orange Ca... 46 3.0 1
(CA791547) AGENCOURT_10304696 NICHD_XGC_Emb1 Xenopus laevis ... 46 3.0 1
(BQ385205) NISC_mn11a03.y1 NICHD_XGC_Ov1 Xenopus laevis cDNA... 46 3.0 1
(BF611759) de88d02.y1 Wellcome CRC pRN3 St19 26 Xenopus laev... 46 3.0 1
(EY823002) PT11-C1-901-049-H10-CT.F Poncirus trifoliata leaf... 46 3.0 1
(EY770567) CR05-C1-102-047-D02-CT.F Mandarin leaf, infected ... 46 3.0 1
(EY720560) CS00-C3-703-011-B05-CT.F Sweet orange fruit, deve... 46 3.0 1
(EY206144) PRAG-aab30h11.b1 Sand_fly_EST_Normalized Phleboto... 46 3.0 1
>(BJ445171) Dictyostelium discoideum cDNA clone:ddv58m13, 3' end,
single read.
Length = 617
Score = 773 bits (390), Expect(3) = 0.0
Identities = 390/390 (100%)
Strand = Plus / Minus
Query: 617 gtatcaaagactagaggcgatgcaggatacaatcttaaaccattcgaatttaaaatgaat 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtatcaaagactagaggcgatgcaggatacaatcttaaaccattcgaatttaaaatgaat 501
Query: 677 gcaattgaaggtttcagatatagagttgaagatgtacttagaactattggtattcgtgca 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gcaattgaaggtttcagatatagagttgaagatgtacttagaactattggtattcgtgca 441
Query: 737 attaaagaagccaagaaaactgaattaaaacaagaacttttaaataacgagaaattaaaa 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 attaaagaagccaagaaaactgaattaaaacaagaacttttaaataacgagaaattaaaa 381
Query: 797 tctcacttttcagagaatccacaagatcttttagctttaaaacatgatactaccttaatt 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tctcacttttcagagaatccacaagatcttttagctttaaaacatgatactaccttaatt 321
Query: 857 aaaaaacaagtcccacttcatttacgtgttgttccagagtacctcttaccaacacaattc 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaaaaacaagtcccacttcatttacgtgttgttccagagtacctcttaccaacacaattc 261
Query: 917 aaaaatcatgccgatcaaaaattggaaatcattccatcaagaccacaatctggtcatcat 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaaaatcatgccgatcaaaaattggaaatcattccatcaagaccacaatctggtcatcat 201
Query: 977 ggtacaaccggtagaagtttaggtgttaat 1006
||||||||||||||||||||||||||||||
Sbjct: 200 ggtacaaccggtagaagtttaggtgttaat 171
Score = 186 bits (94), Expect(3) = 0.0
Identities = 106/106 (100%)
Strand = Plus / Minus
Query: 1069 tacaactctcactggtgaagaattggctcaagctcgttctaaatcactcattaaaagatt 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 tacaactctcactggtgaagaattggctcaagctcgttctaaatcactcattaaaagatt 49
Query: 1129 aaaaattaaanaaggtaatatctcacgacngctnnctcatacacac 1174
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 aaaaattaaanaaggtaatatctcacgacngctnnctcatacacac 3
Score = 99.6 bits (50), Expect(3) = 0.0
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 560 aataagggtattgcattatcatttgtaacttatcataatgaagaactctt 609
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 aataagggtattgcattatcatttgtaacttatcataatgaagaactctt 568
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,007,081,434
Number of extensions: 59304751
Number of successful extensions: 4446798
Number of sequences better than 10.0: 58
Length of query: 1175
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1151
Effective length of database: 97,308,875,965
Effective search space: 112002516235715
Effective search space used: 112002516235715
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| Homology vs Protein |
Query= Contig-U12545-1 (Contig-U12545-1Q) /CSM_Contig/Contig-U12545-1Q.Seq.d
(1175 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q54VF1) RecName: Full=Probable ATP-dependent RNA helicase ddx56... 325 1e-87
AY648812_1(AY648812|pid:none) Danio rerio DEAD/H box 56 RNA heli... 102 2e-20
BC116542_1(BC116542|pid:none) Danio rerio DEAD (Asp-Glu-Ala-Asp)... 101 5e-20
BC068749_1(BC068749|pid:none) Xenopus laevis hypothetical protei... 98 7e-19
AY113641_1(AY113641|pid:none) Drosophila melanogaster RH74035 fu... 96 2e-18
AE014298_3256(AE014298|pid:none) Drosophila melanogaster chromos... 96 2e-18
(Q6BLM5) RecName: Full=ATP-dependent RNA helicase DBP9; ... 96 2e-18
FN392322_495(FN392322|pid:none) Pichia pastoris GS115 chromosome... 96 2e-18
FM992693_167(FM992693|pid:none) Candida dubliniensis CD36 chromo... 93 2e-17
(A5E572) RecName: Full=ATP-dependent RNA helicase DBP9; ... 93 2e-17
AL033391_2(AL033391|pid:none) C.albicans cosmid Ca20C1. 92 3e-17
(Q3SZ40) RecName: Full=Probable ATP-dependent RNA helicase DDX56... 92 5e-17
(Q2UFL0) RecName: Full=ATP-dependent RNA helicase dbp9; ... 91 6e-17
AM920427_1267(AM920427|pid:none) Penicillium chrysogenum Wiscons... 91 1e-16
(A7A1G0) RecName: Full=ATP-dependent RNA helicase DBP9; ... 91 1e-16
AE003853_752(AE003853|pid:none) Vibrio cholerae O1 biovar eltor ... 90 1e-16
CP001234_701(CP001234|pid:none) Vibrio cholerae M66-2 chromosome... 90 2e-16
(Q9D0R4) RecName: Full=Probable ATP-dependent RNA helicase DDX56... 90 2e-16
(A5DC85) RecName: Full=ATP-dependent RNA helicase DBP9; ... 89 2e-16
AK222662_1(AK222662|pid:none) Homo sapiens mRNA for DEAD (Asp-Gl... 89 3e-16
AK022774_1(AK022774|pid:none) Homo sapiens cDNA FLJ12712 fis, cl... 89 3e-16
(Q9NY93) RecName: Full=Probable ATP-dependent RNA helicase DDX56... 89 3e-16
(A1DHV3) RecName: Full=ATP-dependent RNA helicase dbp9; ... 88 5e-16
(Q4X0C2) RecName: Full=ATP-dependent RNA helicase dbp9; ... 88 7e-16
(Q6CUI6) RecName: Full=ATP-dependent RNA helicase DBP9; ... 88 7e-16
(Q4IJ56) RecName: Full=ATP-dependent RNA helicase DBP9; ... 87 1e-15
(O60080) RecName: Full=ATP-dependent RNA helicase dbp9; ... 87 1e-15
(Q5K7L2) RecName: Full=ATP-dependent RNA helicase DBP9; ... 86 2e-15
(A7TPC9) RecName: Full=ATP-dependent RNA helicase DBP9; ... 86 2e-15
CP000744_1148(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 86 3e-15
CP000094_4915(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 86 3e-15
FN392321_754(FN392321|pid:none) Pichia pastoris GS115 chromosome... 86 3e-15
CP001574_648(CP001574|pid:none) Micromonas sp. RCC299 chromosome... 86 3e-15
(A2QCW6) RecName: Full=ATP-dependent RNA helicase dbp9; ... 86 3e-15
AP006840_1647(AP006840|pid:none) Symbiobacterium thermophilum IA... 86 3e-15
(Q5AZA6) RecName: Full=ATP-dependent RNA helicase dbp9; ... 86 3e-15
(A5DPU0) RecName: Full=ATP-dependent RNA helicase MAK5; ... 85 4e-15
FM954973_775(FM954973|pid:none) Vibrio splendidus LGP32 chromoso... 85 4e-15
CP000140_1129(CP000140|pid:none) Parabacteroides distasonis ATCC... 85 6e-15
CP000076_5324(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 85 6e-15
CP000089_1807(CP000089|pid:none) Dechloromonas aromatica RCB, co... 85 6e-15
CP000931_1533(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 85 6e-15
CP000139_386(CP000139|pid:none) Bacteroides vulgatus ATCC 8482, ... 85 6e-15
CP000680_3701(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 84 7e-15
(A5DY34) RecName: Full=ATP-dependent RNA helicase DRS1; ... 84 7e-15
CP000513_965(CP000513|pid:none) Dichelobacter nodosus VCS1703A, ... 84 7e-15
AY449462_12(AY449462|pid:none) Oikopleura dioica clone BACOIKO00... 84 1e-14
AE016853_4555(AE016853|pid:none) Pseudomonas syringae pv. tomato... 84 1e-14
(Q6FUA6) RecName: Full=ATP-dependent RNA helicase DBP9; ... 84 1e-14
CP000472_1191(CP000472|pid:none) Shewanella piezotolerans WP3, c... 84 1e-14
CP000058_4158(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 84 1e-14
FM178379_1312(FM178379|pid:none) Aliivibrio salmonicida LFI1238 ... 83 2e-14
AE004091_3949(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 83 2e-14
(Q6BTL5) RecName: Full=ATP-dependent RNA helicase DRS1; ... 83 2e-14
FM178379_2189(FM178379|pid:none) Aliivibrio salmonicida LFI1238 ... 83 2e-14
CU928176_613(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 83 2e-14
(Q6BZR4) RecName: Full=ATP-dependent RNA helicase DBP9; ... 83 2e-14
CP000557_198(CP000557|pid:none) Geobacillus thermodenitrificans ... 83 2e-14
AE016822_1067(AE016822|pid:none) Leifsonia xyli subsp. xyli str.... 83 2e-14
AP008955_5641(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 83 2e-14
CP001103_1486(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 83 2e-14
CP001083_2917(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 82 3e-14
AM412317_2811(AM412317|pid:none) Clostridium botulinum A str. AT... 82 3e-14
CP001581_2990(CP001581|pid:none) Clostridium botulinum A2 str. K... 82 3e-14
CP000728_2711(CP000728|pid:none) Clostridium botulinum F str. La... 82 3e-14
(Q12389) RecName: Full=ATP-dependent RNA helicase DBP10; ... 82 3e-14
(Q7XJN0) RecName: Full=DEAD-box ATP-dependent RNA helicase 17; ... 82 4e-14
FN392322_758(FN392322|pid:none) Pichia pastoris GS115 chromosome... 82 4e-14
CP000939_2782(CP000939|pid:none) Clostridium botulinum B1 str. O... 82 4e-14
CP001389_2357(CP001389|pid:none) Rhizobium sp. NGR234, complete ... 82 5e-14
AE005673_832(AE005673|pid:none) Caulobacter crescentus CB15, com... 82 5e-14
CP000381_1224(CP000381|pid:none) Neisseria meningitidis 053442, ... 82 5e-14
CP000749_197(CP000749|pid:none) Marinomonas sp. MWYL1, complete ... 82 5e-14
AE002098_1311(AE002098|pid:none) Neisseria meningitidis MC58, co... 82 5e-14
CP001078_3157(CP001078|pid:none) Clostridium botulinum E3 str. A... 81 6e-14
CU633749_2152(CU633749|pid:none) Cupriavidus taiwanensis str. LM... 81 6e-14
(Q54TJ4) RecName: Full=Probable ATP-dependent RNA helicase ddx27... 81 6e-14
CP001056_3377(CP001056|pid:none) Clostridium botulinum B str. Ek... 81 6e-14
AM889285_3225(AM889285|pid:none) Gluconacetobacter diazotrophicu... 81 6e-14
CP000282_1507(CP000282|pid:none) Saccharophagus degradans 2-40, ... 81 6e-14
(A7TJM9) RecName: Full=ATP-dependent RNA helicase DRS1; ... 81 6e-14
CP000497_674(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 81 6e-14
(A3LSN3) RecName: Full=ATP-dependent RNA helicase DRS1; ... 81 6e-14
CP000926_4749(CP000926|pid:none) Pseudomonas putida GB-1, comple... 81 8e-14
CP000851_1456(CP000851|pid:none) Shewanella pealeana ATCC 700345... 81 8e-14
CP000082_1082(CP000082|pid:none) Psychrobacter arcticus 273-4, c... 81 8e-14
CP000712_4584(CP000712|pid:none) Pseudomonas putida F1, complete... 81 8e-14
CP000090_896(CP000090|pid:none) Ralstonia eutropha JMP134 chromo... 81 8e-14
(P57453) RecName: Full=Cold-shock DEAD box protein A homolog; ... 80 1e-13
CP001104_1333(CP001104|pid:none) Eubacterium eligens ATCC 27750,... 80 1e-13
CP000959_1367(CP000959|pid:none) Burkholderia cenocepacia MC0-3 ... 80 1e-13
CP000379_2185(CP000379|pid:none) Burkholderia cenocepacia AU 105... 80 1e-13
CP001197_3032(CP001197|pid:none) Desulfovibrio vulgaris str. 'Mi... 80 1e-13
CP000323_1374(CP000323|pid:none) Psychrobacter cryohalolentis K5... 80 1e-13
CP000885_1978(CP000885|pid:none) Clostridium phytofermentans ISD... 80 1e-13
AM421808_1207(AM421808|pid:none) Neisseria meningitidis serogrou... 80 1e-13
(Q4L7W0) RecName: Full=Probable DEAD-box ATP-dependent RNA helic... 80 1e-13
(P32892) RecName: Full=ATP-dependent RNA helicase DRS1; ... 80 1e-13
BT042115_1(BT042115|pid:none) Zea mays full-length cDNA clone ZM... 80 1e-13
CP001013_616(CP001013|pid:none) Leptothrix cholodnii SP-6, compl... 80 1e-13
CP001189_2523(CP001189|pid:none) Gluconacetobacter diazotrophicu... 80 1e-13
CP001486_511(CP001486|pid:none) Vibrio cholerae MJ-1236 chromoso... 80 1e-13
CP000285_1130(CP000285|pid:none) Chromohalobacter salexigens DSM... 80 1e-13
AP008957_4094(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 80 1e-13
CP000285_809(CP000285|pid:none) Chromohalobacter salexigens DSM ... 80 2e-13
AM260479_2644(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 80 2e-13
(A7F4L5) RecName: Full=ATP-dependent RNA helicase drs1; ... 80 2e-13
CP000507_2677(CP000507|pid:none) Shewanella amazonensis SB2B, co... 80 2e-13
CP000507_1268(CP000507|pid:none) Shewanella amazonensis SB2B, co... 80 2e-13
CP000806_4432(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 80 2e-13
FM954973_196(FM954973|pid:none) Vibrio splendidus LGP32 chromoso... 80 2e-13
(Q6ATJ8) RecName: Full=DEAD-box ATP-dependent RNA helicase 16; ... 80 2e-13
AE016796_216(AE016796|pid:none) Vibrio vulnificus CMCP6 chromoso... 80 2e-13
(A6RUH2) RecName: Full=ATP-dependent RNA helicase drs1; ... 80 2e-13
AM920431_1322(AM920431|pid:none) Penicillium chrysogenum Wiscons... 80 2e-13
AM747721_2824(AM747721|pid:none) Burkholderia cenocepacia J2315 ... 80 2e-13
(Q8K9H6) RecName: Full=Cold-shock DEAD box protein A homolog; ... 79 2e-13
CP000644_1790(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 79 2e-13
CP000746_2023(CP000746|pid:none) Actinobacillus succinogenes 130... 79 2e-13
(Q6FW42) RecName: Full=ATP-dependent RNA helicase DRS1; ... 79 2e-13
CP001186_218(CP001186|pid:none) Bacillus cereus G9842, complete ... 79 2e-13
AM263198_859(AM263198|pid:none) Listeria welshimeri serovar 6b s... 79 2e-13
(A2QAX7) RecName: Full=ATP-dependent RNA helicase drs1; ... 79 2e-13
AF199442_1(AF199442|pid:none) Methanococcoides burtonii DEAD-box... 79 2e-13
(A4QYM6) RecName: Full=ATP-dependent RNA helicase DRS1; ... 79 2e-13
(Q6BV58) RecName: Full=ATP-dependent RNA helicase MAK5; ... 79 3e-13
CP000442_688(CP000442|pid:none) Burkholderia ambifaria AMMD chro... 79 3e-13
CP000937_1787(CP000937|pid:none) Francisella philomiragia subsp.... 79 3e-13
(Q09903) RecName: Full=ATP-dependent RNA helicase drs1; ... 79 3e-13
AE014291_1019(AE014291|pid:none) Brucella suis 1330 chromosome I... 79 3e-13
CP000150_734(CP000150|pid:none) Burkholderia sp. 383 chromosome ... 79 3e-13
CP001100_309(CP001100|pid:none) Chloroherpeton thalassium ATCC 3... 79 3e-13
BA000016_1396(BA000016|pid:none) Clostridium perfringens str. 13... 79 3e-13
CP000821_3842(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 79 3e-13
(Q49Z29) RecName: Full=Probable DEAD-box ATP-dependent RNA helic... 79 3e-13
AE008384_2556(AE008384|pid:none) Methanosarcina mazei strain Goe... 79 3e-13
AE017223_982(AE017223|pid:none) Brucella abortus biovar 1 str. 9... 79 3e-13
CP000263_209(CP000263|pid:none) Buchnera aphidicola str. Cc (Cin... 79 3e-13
CP000721_2878(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 79 3e-13
CP000708_937(CP000708|pid:none) Brucella ovis ATCC 25840 chromos... 79 3e-13
CP001157_965(CP001157|pid:none) Azotobacter vinelandii DJ, compl... 79 3e-13
AM711867_1243(AM711867|pid:none) Clavibacter michiganensis subsp... 79 3e-13
CP001503_2521(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 79 4e-13
CP001230_897(CP001230|pid:none) Persephonella marina EX-H1, comp... 79 4e-13
AY847069_1(AY847069|pid:none) Toxoplasma gondii DEAD box RNA hel... 79 4e-13
CP000412_279(CP000412|pid:none) Lactobacillus delbrueckii subsp.... 79 4e-13
CP001229_1425(CP001229|pid:none) Sulfurihydrogenibium azorense A... 79 4e-13
AE016825_2892(AE016825|pid:none) Chromobacterium violaceum ATCC ... 79 4e-13
CP001074_3333(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 79 4e-13
CP001133_558(CP001133|pid:none) Vibrio fischeri MJ11 chromosome ... 79 4e-13
CP000514_3786(CP000514|pid:none) Marinobacter aquaeolei VT8, com... 79 4e-13
CP000252_1807(CP000252|pid:none) Syntrophus aciditrophicus SB, c... 79 4e-13
(Q2YUH3) RecName: Full=Probable DEAD-box ATP-dependent RNA helic... 79 4e-13
CP000394_2435(CP000394|pid:none) Granulibacter bethesdensis CGDN... 79 4e-13
CP001053_3067(CP001053|pid:none) Burkholderia phytofirmans PsJN ... 79 4e-13
CP000503_833(CP000503|pid:none) Shewanella sp. W3-18-1, complete... 78 5e-13
CP000853_2302(CP000853|pid:none) Alkaliphilus oremlandii OhILAs,... 78 5e-13
(P0C2N8) RecName: Full=ATP-dependent RNA helicase drs-1; ... 78 5e-13
AE014075_3826(AE014075|pid:none) Escherichia coli CFT073, comple... 78 5e-13
(Q8XA87) RecName: Full=Cold-shock DEAD box protein A; E... 78 5e-13
CP000243_3526(CP000243|pid:none) Escherichia coli UTI89, complet... 78 5e-13
CP001287_4093(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 78 5e-13
CP000753_1974(CP000753|pid:none) Shewanella baltica OS185, compl... 78 5e-13
AM412317_1765(AM412317|pid:none) Clostridium botulinum A str. AT... 78 5e-13
(P0A9P6) RecName: Full=Cold-shock DEAD box protein A; E... 78 5e-13
CU928164_3636(CU928164|pid:none) Escherichia coli IAI39 chromoso... 78 5e-13
CP000911_1042(CP000911|pid:none) Brucella suis ATCC 23445 chromo... 78 5e-13
(Q6FNA2) RecName: Full=ATP-dependent RNA helicase DBP10; ... 78 5e-13
(Q55BR9) RecName: Full=Probable ATP-dependent RNA helicase ddx49... 78 5e-13
CP000034_3099(CP000034|pid:none) Shigella dysenteriae Sd197, com... 78 5e-13
CP000109_780(CP000109|pid:none) Thiomicrospira crunogena XCL-2, ... 78 5e-13
CP000749_2357(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 78 5e-13
AE017262_874(AE017262|pid:none) Listeria monocytogenes str. 4b F... 78 5e-13
CP001279_1502(CP001279|pid:none) Nautilia profundicola AmH, comp... 78 5e-13
(Q2FF45) RecName: Full=Probable DEAD-box ATP-dependent RNA helic... 78 5e-13
CP000813_426(CP000813|pid:none) Bacillus pumilus SAFR-032, compl... 78 5e-13
M63288_1(M63288|pid:none) E.coli deaD gene, complete cds. 78 5e-13
AC1540(AC1540) ATP-dependent RNA helicase homolog lin0859 [impor... 78 5e-13
AE005674_3205(AE005674|pid:none) Shigella flexneri 2a str. 301, ... 78 5e-13
CU928160_3221(CU928160|pid:none) Escherichia coli IAI1 chromosom... 78 5e-13
EU894953_1(EU894953|pid:none) Escherichia coli strain TB182A ind... 78 5e-13
CP000851_3481(CP000851|pid:none) Shewanella pealeana ATCC 700345... 78 5e-13
AL591985_1186(AL591985|pid:none) Sinorhizobium meliloti 1021 pla... 78 7e-13
AI0423(AI0423) cold-shock dead-box protein A [imported] - Yersin... 78 7e-13
AE017125_1768(AE017125|pid:none) Helicobacter hepaticus ATCC 514... 78 7e-13
AP007255_1428(AP007255|pid:none) Magnetospirillum magneticum AMB... 78 7e-13
(Q73EU1) RecName: Full=DEAD-box ATP-dependent RNA helicase cshA;... 78 7e-13
FP236842_367(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/96... 78 7e-13
CP000939_1704(CP000939|pid:none) Clostridium botulinum B1 str. O... 78 7e-13
CP000116_1101(CP000116|pid:none) Thiobacillus denitrificans ATCC... 78 7e-13
CP000302_2512(CP000302|pid:none) Shewanella denitrificans OS217,... 78 7e-13
CP000644_2098(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 78 7e-13
CP000517_221(CP000517|pid:none) Lactobacillus helveticus DPC 457... 78 7e-13
CP000922_194(CP000922|pid:none) Anoxybacillus flavithermus WK1, ... 78 7e-13
BA000016_862(BA000016|pid:none) Clostridium perfringens str. 13 ... 78 7e-13
CU234118_971(CU234118|pid:none) Bradyrhizobium sp. ORS278,comple... 78 7e-13
CP001027_444(CP001027|pid:none) Burkholderia ambifaria MC40-6 ch... 78 7e-13
AE003852_1386(AE003852|pid:none) Vibrio cholerae O1 biovar eltor... 78 7e-13
CP000950_3677(CP000950|pid:none) Yersinia pseudotuberculosis YPI... 78 7e-13
(Q63GX5) RecName: Full=DEAD-box ATP-dependent RNA helicase cshA;... 78 7e-13
CP000312_821(CP000312|pid:none) Clostridium perfringens SM101, c... 78 7e-13
CP000803_1032(CP000803|pid:none) Francisella tularensis subsp. h... 78 7e-13
CP000282_3026(CP000282|pid:none) Saccharophagus degradans 2-40, ... 78 7e-13
(Q6CTN7) RecName: Full=ATP-dependent RNA helicase MAK5; ... 78 7e-13
CP001089_3483(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 78 7e-13
CP001097_1785(CP001097|pid:none) Chlorobium limicola DSM 245, co... 78 7e-13
CP000931_3556(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 78 7e-13
CP001097_528(CP001097|pid:none) Chlorobium limicola DSM 245, com... 78 7e-13
CP001504_459(CP001504|pid:none) Burkholderia glumae BGR1 chromos... 78 7e-13
(A0R8U6) RecName: Full=DEAD-box ATP-dependent RNA helicase cshA;... 78 7e-13
CU928166_128(CU928166|pid:none) Kluyveromyces thermotolerans str... 77 9e-13
CP000790_1195(CP000790|pid:none) Vibrio harveyi ATCC BAA-1116 ch... 77 9e-13
CP000283_3494(CP000283|pid:none) Rhodopseudomonas palustris BisB... 77 9e-13
BA000038_360(BA000038|pid:none) Vibrio vulnificus YJ016 DNA, chr... 77 9e-13
CP000021_374(CP000021|pid:none) Vibrio fischeri ES114 chromosome... 77 9e-13
CP000758_2123(CP000758|pid:none) Ochrobactrum anthropi ATCC 4918... 77 9e-13
CP000153_1937(CP000153|pid:none) Sulfurimonas denitrificans DSM ... 77 9e-13
CU633900_249(CU633900|pid:none) Podospora anserina genomic DNA c... 77 9e-13
(Q7RY59) RecName: Full=ATP-dependent rRNA helicase rrp-3; ... 77 9e-13
AE016796_1430(AE016796|pid:none) Vibrio vulnificus CMCP6 chromos... 77 9e-13
CP000563_3406(CP000563|pid:none) Shewanella baltica OS155, compl... 77 9e-13
(Q0INC5) RecName: Full=DEAD-box ATP-dependent RNA helicase 28; ... 77 9e-13
BA000032_390(BA000032|pid:none) Vibrio parahaemolyticus RIMD 221... 77 9e-13
CP000507_2439(CP000507|pid:none) Shewanella amazonensis SB2B, co... 77 9e-13
CP000301_3659(CP000301|pid:none) Rhodopseudomonas palustris BisB... 77 9e-13
CP000753_851(CP000753|pid:none) Shewanella baltica OS185, comple... 77 9e-13
AE015928_1885(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 77 9e-13
BA000012_268(BA000012|pid:none) Mesorhizobium loti MAFF303099 DN... 77 9e-13
(P0C2N7) RecName: Full=ATP-dependent RNA helicase DRS1; ... 77 9e-13
AC161241_22(AC161241|pid:none) Medicago truncatula clone mth2-19... 77 9e-13
CP000462_2340(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 77 9e-13
CP000115_313(CP000115|pid:none) Nitrobacter winogradskyi Nb-255,... 77 9e-13
AM236080_3599(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 77 9e-13
(Q8CRP6) RecName: Full=Probable DEAD-box ATP-dependent RNA helic... 77 9e-13
CP000099_136(CP000099|pid:none) Methanosarcina barkeri str. Fusa... 77 9e-13
CP001078_3210(CP001078|pid:none) Clostridium botulinum E3 str. A... 77 9e-13
CP001191_2861(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 77 1e-12
AP009247_127(AP009247|pid:none) Candidatus Vesicomyosocius okuta... 77 1e-12
CP000448_1836(CP000448|pid:none) Syntrophomonas wolfei subsp. wo... 77 1e-12
CP001337_415(CP001337|pid:none) Chloroflexus aggregans DSM 9485,... 77 1e-12
CP000472_3030(CP000472|pid:none) Shewanella piezotolerans WP3, c... 77 1e-12
(Q4I830) RecName: Full=ATP-dependent RNA helicase DRS1; ... 77 1e-12
BT065510_1(BT065510|pid:none) Zea mays full-length cDNA clone ZM... 77 1e-12
AE009442_143(AE009442|pid:none) Xylella fastidiosa Temecula1, co... 77 1e-12
AE017285_3293(AE017285|pid:none) Desulfovibrio vulgaris subsp. v... 77 1e-12
(Q757U8) RecName: Full=ATP-dependent RNA helicase DBP10; ... 77 1e-12
CP000133_3112(CP000133|pid:none) Rhizobium etli CFN 42, complete... 77 1e-12
AE003849_192(AE003849|pid:none) Xylella fastidiosa 9a5c, complet... 77 1e-12
CR954212_61(CR954212|pid:none) Ostreococcus tauri strain OTTH059... 77 1e-12
AE016796_140(AE016796|pid:none) Vibrio vulnificus CMCP6 chromoso... 77 1e-12
CP000544_905(CP000544|pid:none) Halorhodospira halophila SL1, co... 77 2e-12
CU928167_371(CU928167|pid:none) Kluyveromyces thermotolerans str... 77 2e-12
CP000884_2893(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 77 2e-12
AE017226_2093(AE017226|pid:none) Treponema denticola ATCC 35405,... 77 2e-12
CP001056_3425(CP001056|pid:none) Clostridium botulinum B str. Ek... 77 2e-12
CP000777_2668(CP000777|pid:none) Leptospira biflexa serovar Pato... 77 2e-12
CP001102_1238(CP001102|pid:none) Candidatus Amoebophilus asiatic... 77 2e-12
CP000774_2471(CP000774|pid:none) Parvibaculum lavamentivorans DS... 77 2e-12
CP000542_4658(CP000542|pid:none) Verminephrobacter eiseniae EF01... 77 2e-12
AE017321_704(AE017321|pid:none) Wolbachia endosymbiont strain TR... 77 2e-12
CP000302_3007(CP000302|pid:none) Shewanella denitrificans OS217,... 77 2e-12
CP000507_2396(CP000507|pid:none) Shewanella amazonensis SB2B, co... 77 2e-12
FM954973_316(FM954973|pid:none) Vibrio splendidus LGP32 chromoso... 77 2e-12
AE001439_231(AE001439|pid:none) Helicobacter pylori J99, complet... 77 2e-12
AF083031_152(AF083031|pid:none) Guillardia theta nucleomorph chr... 77 2e-12
BX950851_709(BX950851|pid:none) Erwinia carotovora subsp. atrose... 77 2e-12
BA000032_583(BA000032|pid:none) Vibrio parahaemolyticus RIMD 221... 76 2e-12
AM747720_2408(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 76 2e-12
CP000910_906(CP000910|pid:none) Renibacterium salmoninarum ATCC ... 76 2e-12
CP000250_1789(CP000250|pid:none) Rhodopseudomonas palustris HaA2... 76 2e-12
AP007255_1385(AP007255|pid:none) Magnetospirillum magneticum AMB... 76 2e-12
FM211050_25(FM211050|pid:none) Photorhabdus asymbiotica subsp. a... 76 2e-12
AM398681_1765(AM398681|pid:none) Flavobacterium psychrophilum JI... 76 2e-12
BA000038_939(BA000038|pid:none) Vibrio vulnificus YJ016 DNA, chr... 76 2e-12
AM295250_1571(AM295250|pid:none) Staphylococcus carnosus subsp. ... 76 2e-12
CP000453_1600(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-... 76 2e-12
CP001139_1842(CP001139|pid:none) Vibrio fischeri MJ11 chromosome... 76 2e-12
CR378678_331(CR378678|pid:none) Photobacterium profundum SS9 chr... 76 2e-12
CP000086_975(CP000086|pid:none) Burkholderia thailandensis E264 ... 76 2e-12
CP000964_1195(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 76 2e-12
CP000431_5979(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 76 2e-12
CP000875_4947(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 76 2e-12
BA000035_1257(BA000035|pid:none) Corynebacterium efficiens YS-31... 76 2e-12
CP000302_3296(CP000302|pid:none) Shewanella denitrificans OS217,... 76 2e-12
CP000440_2346(CP000440|pid:none) Burkholderia ambifaria AMMD chr... 76 2e-12
CP000868_957(CP000868|pid:none) Burkholderia multivorans ATCC 17... 76 2e-12
CP001150_849(CP001150|pid:none) Rhodobacter sphaeroides KD131 ch... 76 2e-12
CP000487_756(CP000487|pid:none) Campylobacter fetus subsp. fetus... 76 2e-12
AM942759_3393(AM942759|pid:none) Proteus mirabilis strain HI4320... 76 2e-12
CP000436_712(CP000436|pid:none) Haemophilus somnus 129PT, comple... 76 2e-12
CP000009_88(CP000009|pid:none) Gluconobacter oxydans 621H, compl... 76 2e-12
CP001110_1956(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 76 2e-12
CP000577_1185(CP000577|pid:none) Rhodobacter sphaeroides ATCC 17... 76 2e-12
CP000661_1966(CP000661|pid:none) Rhodobacter sphaeroides ATCC 17... 76 2e-12
AP011115_6097(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 76 2e-12
AM286415_2746(AM286415|pid:none) Yersinia enterocolitica subsp. ... 76 3e-12
CP000139_1253(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 76 3e-12
AE005174_3458(AE005174|pid:none) Escherichia coli O157:H7 EDL933... 76 3e-12
AE005674_2638(AE005674|pid:none) Shigella flexneri 2a str. 301, ... 76 3e-12
CP000009_190(CP000009|pid:none) Gluconobacter oxydans 621H, comp... 76 3e-12
CP001600_447(CP001600|pid:none) Edwardsiella ictaluri 93-146, co... 76 3e-12
BX936438_5(BX936438|pid:none) Zebrafish DNA sequence from clone ... 76 3e-12
CP000790_1743(CP000790|pid:none) Vibrio harveyi ATCC BAA-1116 ch... 76 3e-12
CP000036_2416(CP000036|pid:none) Shigella boydii Sb227, complete... 76 3e-12
CP000020_1810(CP000020|pid:none) Vibrio fischeri ES114 chromosom... 76 3e-12
BC075762_1(BC075762|pid:none) Danio rerio DEAD (Asp-Glu-Ala-Asp)... 76 3e-12
AE017042_944(AE017042|pid:none) Yersinia pestis biovar Microtus ... 76 3e-12
CP000783_652(CP000783|pid:none) Enterobacter sakazakii ATCC BAA-... 76 3e-12
CP000378_1692(CP000378|pid:none) Burkholderia cenocepacia AU 105... 76 3e-12
AE014299_3043(AE014299|pid:none) Shewanella oneidensis MR-1, com... 76 3e-12
CP001575_427(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 76 3e-12
EU897153_1(EU897153|pid:none) Escherichia coli strain TB182A ATP... 76 3e-12
CP001071_15(CP001071|pid:none) Akkermansia muciniphila ATCC BAA-... 76 3e-12
CP000447_2427(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 76 3e-12
BX936398_1214(BX936398|pid:none) Yersinia pseudotuberculosis IP3... 76 3e-12
AF426171_17(AF426171|pid:none) Yersinia pestis transposase (tnp)... 76 3e-12
AE006468_2573(AE006468|pid:none) Salmonella enterica subsp. ente... 76 3e-12
FM178380_439(FM178380|pid:none) Aliivibrio salmonicida LFI1238 c... 76 3e-12
(P21507) RecName: Full=ATP-dependent RNA helicase srmB; ... 76 3e-12
CP000931_2672(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 76 3e-12
CP000909_3025(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 76 3e-12
AD0830(AD0830) ATP-dependent RNA helicase SrmB [imported] - Salm... 76 3e-12
AP007151_1052(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 75 3e-12
CP000614_2376(CP000614|pid:none) Burkholderia vietnamiensis G4 c... 75 3e-12
BA000011_1326(BA000011|pid:none) Thermoplasma volcanium GSS1 DNA... 75 3e-12
CP001341_2714(CP001341|pid:none) Arthrobacter chlorophenolicus A... 75 3e-12
AF487524_1(AF487524|pid:none) Vibrio fischeri ATP-dependent RNA ... 75 3e-12
AD2863(AD2863) dead-box ATP-dependent RNA helicase rhlE [importe... 75 3e-12
CP000157_975(CP000157|pid:none) Erythrobacter litoralis HTCC2594... 75 3e-12
CP000822_4434(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 75 3e-12
(A1D405) RecName: Full=ATP-dependent rRNA helicase rrp3; ... 75 3e-12
CP001052_1212(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 75 3e-12
CP000653_3567(CP000653|pid:none) Enterobacter sp. 638, complete ... 75 3e-12
AM114193_133(AM114193|pid:none) Uncultured methanogenic archaeon... 75 3e-12
CR954206_211(CR954206|pid:none) Ostreococcus tauri strain OTTH05... 75 3e-12
CP001133_187(CP001133|pid:none) Vibrio fischeri MJ11 chromosome ... 75 3e-12
CP000472_1591(CP000472|pid:none) Shewanella piezotolerans WP3, c... 75 3e-12
AF186181_2(AF186181|pid:none) Synechococcus PCC7002 slr0082 (slr... 75 3e-12
CP001099_1052(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,... 75 3e-12
CP000021_155(CP000021|pid:none) Vibrio fischeri ES114 chromosome... 75 3e-12
CP000681_2480(CP000681|pid:none) Shewanella putrefaciens CN-32, ... 75 3e-12
CP000680_2129(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 75 3e-12
AC120983_1(AC120983|pid:none) Oryza sativa chromosome 3 BAC OSJN... 75 3e-12
CP000783_3459(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 75 3e-12
CP000681_2923(CP000681|pid:none) Shewanella putrefaciens CN-32, ... 75 3e-12
JX0314(JX0314) DEAD box protein - Klebsiella pneumoniae &L08387... 75 3e-12
CP000454_3026(CP000454|pid:none) Arthrobacter sp. FB24, complete... 75 3e-12
AE014188_490(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 75 3e-12
CP000891_2922(CP000891|pid:none) Shewanella baltica OS195, compl... 75 3e-12
CP000264_115(CP000264|pid:none) Jannaschia sp. CCS1, complete ge... 75 3e-12
CP000488_118(CP000488|pid:none) Candidatus Ruthia magnifica str.... 75 3e-12
EF144298_1(EF144298|pid:none) Populus trichocarpa clone PX0015_H... 75 3e-12
AP009153_2770(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 75 3e-12
DQ363488_1(DQ363488|pid:none) Ictalurus punctatus isolate SOOD12... 75 3e-12
CP000446_2433(CP000446|pid:none) Shewanella sp. MR-4, complete g... 75 5e-12
CP000096_578(CP000096|pid:none) Pelodictyon luteolum DSM 273, co... 75 5e-12
CP000667_2072(CP000667|pid:none) Salinispora tropica CNB-440, co... 75 5e-12
(Q5KBE2) RecName: Full=ATP-dependent rRNA helicase RRP3; ... 75 5e-12
CP000304_2451(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 75 5e-12
AE003853_202(AE003853|pid:none) Vibrio cholerae O1 biovar eltor ... 75 5e-12
CP000444_2493(CP000444|pid:none) Shewanella sp. MR-7, complete g... 75 5e-12
CP000489_1723(CP000489|pid:none) Paracoccus denitrificans PD1222... 75 5e-12
CP001072_242(CP001072|pid:none) Helicobacter pylori Shi470, comp... 75 5e-12
CR954202_287(CR954202|pid:none) Ostreococcus tauri strain OTTH05... 75 5e-12
CP000083_36(CP000083|pid:none) Colwellia psychrerythraea 34H, co... 75 5e-12
(Q4WJE9) RecName: Full=ATP-dependent rRNA helicase rrp3; ... 75 5e-12
CP001252_1519(CP001252|pid:none) Shewanella baltica OS223, compl... 75 5e-12
AM260522_1236(AM260522|pid:none) Helicobacter acinonychis str. S... 75 5e-12
CP001029_2468(CP001029|pid:none) Methylobacterium populi BJ001, ... 75 5e-12
BA000028_609(BA000028|pid:none) Oceanobacillus iheyensis HTE831 ... 75 5e-12
CP001113_3310(CP001113|pid:none) Salmonella enterica subsp. ente... 75 5e-12
CP000753_2779(CP000753|pid:none) Shewanella baltica OS185, compl... 75 5e-12
CP001010_1054(CP001010|pid:none) Polynucleobacter necessarius su... 75 5e-12
BX842646_296(BX842646|pid:none) Bdellovibrio bacteriovorus compl... 75 5e-12
CU207211_422(CU207211|pid:none) Herminiimonas arsenicoxydans chr... 75 5e-12
CP000503_2227(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 75 5e-12
CP000563_2748(CP000563|pid:none) Shewanella baltica OS155, compl... 75 5e-12
(Q1E1N5) RecName: Full=ATP-dependent rRNA helicase RRP3; ... 75 5e-12
AB0901(AB0901) ATP-dependent RNA helicase (dead-box protein) [im... 75 5e-12
(Q1E2B2) RecName: Full=ATP-dependent RNA helicase DRS1; ... 75 5e-12
CP000241_251(CP000241|pid:none) Helicobacter pylori HPAG1, compl... 75 5e-12
CP001298_2663(CP001298|pid:none) Methylobacterium chloromethanic... 75 5e-12
AM933172_3101(AM933172|pid:none) Salmonella enterica subsp. ente... 75 5e-12
AE010299_3853(AE010299|pid:none) Methanosarcina acetivorans str.... 75 5e-12
AM933173_3060(AM933173|pid:none) Salmonella enterica subsp. ente... 75 5e-12
CP000407_1566(CP000407|pid:none) Streptococcus suis 05ZYH33, com... 75 5e-12
CP000089_3281(CP000089|pid:none) Dechloromonas aromatica RCB, co... 75 5e-12
BA000038_1159(BA000038|pid:none) Vibrio vulnificus YJ016 DNA, ch... 75 6e-12
(Q0DLB9) RecName: Full=DEAD-box ATP-dependent RNA helicase 17; ... 75 6e-12
CP000112_152(CP000112|pid:none) Desulfovibrio desulfuricans G20,... 75 6e-12
CP001111_1225(CP001111|pid:none) Stenotrophomonas maltophilia R5... 75 6e-12
CU928162_2940(CU928162|pid:none) Escherichia coli ED1a chromosom... 75 6e-12
AY088068_1(AY088068|pid:none) Arabidopsis thaliana clone 40850 m... 75 6e-12
AC079356_6(AC079356|pid:none) Oryza sativa (japonica cultivar-gr... 75 6e-12
CP000492_1207(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 75 6e-12
CP000390_1414(CP000390|pid:none) Mesorhizobium sp. BNC1, complet... 75 6e-12
AP008211_68(AP008211|pid:none) Oryza sativa (japonica cultivar-g... 75 6e-12
(A7TGW7) RecName: Full=ATP-dependent RNA helicase DBP10; ... 75 6e-12
AY648729_1(AY648729|pid:none) Danio rerio DEAD box polypeptide 2... 75 6e-12
AM494961_24(AM494961|pid:none) Leishmania braziliensis chromosom... 75 6e-12
CR954208_313(CR954208|pid:none) Ostreococcus tauri strain OTTH05... 75 6e-12
BT078269_1(BT078269|pid:none) Lepeophtheirus salmonis Pacific fo... 75 6e-12
CP000961_1729(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 75 6e-12
CP001098_542(CP001098|pid:none) Halothermothrix orenii H 168, co... 75 6e-12
AE014299_3299(AE014299|pid:none) Shewanella oneidensis MR-1, com... 75 6e-12
CP000471_1621(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 75 6e-12
(A6QRQ7) RecName: Full=ATP-dependent rRNA helicase RRP3; ... 75 6e-12
BX950229_457(BX950229|pid:none) Methanococcus maripaludis strain... 75 6e-12
(Q0UZ59) RecName: Full=ATP-dependent RNA helicase DBP9; ... 75 6e-12
CP000698_368(CP000698|pid:none) Geobacter uraniireducens Rf4, co... 75 6e-12
BC072214_1(BC072214|pid:none) Xenopus laevis hypothetical protei... 75 6e-12
(P96614) RecName: Full=DEAD-box ATP-dependent RNA helicase cshA;... 74 8e-12
CP000302_1406(CP000302|pid:none) Shewanella denitrificans OS217,... 74 8e-12
CP000850_2174(CP000850|pid:none) Salinispora arenicola CNS-205, ... 74 8e-12
CP000606_2445(CP000606|pid:none) Shewanella loihica PV-4, comple... 74 8e-12
CP000472_4012(CP000472|pid:none) Shewanella piezotolerans WP3, c... 74 8e-12
CT573071_467(CT573071|pid:none) Kuenenia stuttgartiensis genome ... 74 8e-12
CU695239_158(CU695239|pid:none) Ralstonia solanacearum strain Mo... 74 8e-12
CP000821_2387(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 74 8e-12
AF542976_3(AF542976|pid:none) Yersinia enterocolitica PNPase (pn... 74 8e-12
AM743169_1381(AM743169|pid:none) Stenotrophomonas maltophilia K2... 74 8e-12
CR954246_486(CR954246|pid:none) Pseudoalteromonas haloplanktis s... 74 8e-12
CP000446_3118(CP000446|pid:none) Shewanella sp. MR-4, complete g... 74 8e-12
CP000749_973(CP000749|pid:none) Marinomonas sp. MWYL1, complete ... 74 8e-12
CP000124_904(CP000124|pid:none) Burkholderia pseudomallei 1710b ... 74 8e-12
CP000423_2419(CP000423|pid:none) Lactobacillus casei ATCC 334, c... 74 8e-12
CP001001_3757(CP001001|pid:none) Methylobacterium radiotolerans ... 74 8e-12
CP000113_3807(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 74 8e-12
CP001252_2643(CP001252|pid:none) Shewanella baltica OS223, compl... 74 8e-12
CP000446_1159(CP000446|pid:none) Shewanella sp. MR-4, complete g... 74 8e-12
CP000681_1246(CP000681|pid:none) Shewanella putrefaciens CN-32, ... 74 8e-12
CP000270_2242(CP000270|pid:none) Burkholderia xenovorans LB400 c... 74 8e-12
BX571965_705(BX571965|pid:none) Burkholderia pseudomallei strain... 74 8e-12
CP000546_2332(CP000546|pid:none) Burkholderia mallei NCTC 10229 ... 74 8e-12
CP000233_346(CP000233|pid:none) Lactobacillus salivarius UCC118,... 74 8e-12
CP000109_2006(CP000109|pid:none) Thiomicrospira crunogena XCL-2,... 74 8e-12
(A5DKW3) RecName: Full=ATP-dependent RNA helicase DRS1; ... 74 8e-12
CP000469_1411(CP000469|pid:none) Shewanella sp. ANA-3, complete ... 74 8e-12
(Q2H1Q8) RecName: Full=ATP-dependent rRNA helicase RRP3; ... 74 8e-12
CP000096_957(CP000096|pid:none) Pelodictyon luteolum DSM 273, co... 74 8e-12
AP008232_913(AP008232|pid:none) Sodalis glossinidius str. 'morsi... 74 8e-12
CP000698_1946(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 74 8e-12
CP000316_1497(CP000316|pid:none) Polaromonas sp. JS666, complete... 74 8e-12
(Q6BL34) RecName: Full=ATP-dependent RNA helicase DBP10; ... 74 8e-12
CP000830_1326(CP000830|pid:none) Dinoroseobacter shibae DFL 12, ... 74 8e-12
CP000446_1365(CP000446|pid:none) Shewanella sp. MR-4, complete g... 74 1e-11
CP000560_443(CP000560|pid:none) Bacillus amyloliquefaciens FZB42... 74 1e-11
AP009152_560(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, c... 74 1e-11
T32328(T32328)hypothetical protein C24H12.4 - Caenorhabditis ele... 74 1e-11
AE015927_1659(AE015927|pid:none) Clostridium tetani E88, complet... 74 1e-11
CP000822_2273(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 74 1e-11
CP000383_1634(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 74 1e-11
AF025451_3(AF025451|pid:none) Caenorhabditis elegans cosmid C24H... 74 1e-11
CR940353_707(CR940353|pid:none) Theileria annulata strain Ankara... 74 1e-11
AE006470_1024(AE006470|pid:none) Chlorobium tepidum TLS, complet... 74 1e-11
CP000743_1348(CP000743|pid:none) Methanococcus aeolicus Nankai-3... 74 1e-11
CP000444_1427(CP000444|pid:none) Shewanella sp. MR-7, complete g... 74 1e-11
CP000503_2814(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 74 1e-11
D89592_1(D89592|pid:none) Vibrio alginolyticus rhlE, KtrA and Kt... 74 1e-11
(Q09719) RecName: Full=ATP-dependent RNA helicase dbp10; ... 74 1e-11
CP000514_957(CP000514|pid:none) Marinobacter aquaeolei VT8, comp... 74 1e-11
(Q65N62) RecName: Full=DEAD-box ATP-dependent RNA helicase cshA;... 74 1e-11
CP000783_2484(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 74 1e-11
BC078919_1(BC078919|pid:none) Rattus norvegicus DEAD (Asp-Glu-Al... 74 1e-11
CR954246_954(CR954246|pid:none) Pseudoalteromonas haloplanktis s... 74 1e-11
CP000302_882(CP000302|pid:none) Shewanella denitrificans OS217, ... 74 1e-11
CP000377_1809(CP000377|pid:none) Silicibacter sp. TM1040, comple... 74 1e-11
CP000886_2620(CP000886|pid:none) Salmonella enterica subsp. ente... 74 1e-11
CP001111_480(CP001111|pid:none) Stenotrophomonas maltophilia R55... 74 1e-11
CP000127_2510(CP000127|pid:none) Nitrosococcus oceani ATCC 19707... 74 1e-11
AE017220_817(AE017220|pid:none) Salmonella enterica subsp. enter... 74 1e-11
CU633876_141(CU633876|pid:none) Podospora anserina genomic DNA c... 74 1e-11
EU016598_36(EU016598|pid:none) Uncultured Group I marine crenarc... 74 1e-11
CP000252_2847(CP000252|pid:none) Syntrophus aciditrophicus SB, c... 74 1e-11
AE006468_793(AE006468|pid:none) Salmonella enterica subsp. enter... 74 1e-11
CP000626_76(CP000626|pid:none) Vibrio cholerae O395 chromosome 1... 74 1e-11
CP000697_2601(CP000697|pid:none) Acidiphilium cryptum JF-5, comp... 74 1e-11
AE016825_1003(AE016825|pid:none) Chromobacterium violaceum ATCC ... 74 1e-11
CP000469_3572(CP000469|pid:none) Shewanella sp. ANA-3, complete ... 74 1e-11
BA000045_2508(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 74 1e-11
AE003852_648(AE003852|pid:none) Vibrio cholerae O1 biovar eltor ... 74 1e-11
AE014613_1943(AE014613|pid:none) Salmonella enterica subsp. ente... 74 1e-11
CP000608_517(CP000608|pid:none) Francisella tularensis subsp. tu... 74 1e-11
AJ749949_1471(AJ749949|pid:none) Francisella tularensis subsp. t... 74 1e-11
CU638744_755(CU638744|pid:none) Podospora anserina genomic DNA c... 74 1e-11
CP000447_3679(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 74 1e-11
AE003853_61(AE003853|pid:none) Vibrio cholerae O1 biovar eltor s... 74 1e-11
CU928178_486(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 74 1e-11
CP000552_1191(CP000552|pid:none) Prochlorococcus marinus str. MI... 74 1e-11
CP000627_180(CP000627|pid:none) Vibrio cholerae O395 chromosome ... 74 1e-11
(Q7RZH4) RecName: Full=ATP-dependent RNA helicase mak-5; ... 74 1e-11
CP000108_1099(CP000108|pid:none) Chlorobium chlorochromatii CaD3... 74 1e-11
AM933173_784(AM933173|pid:none) Salmonella enterica subsp. enter... 74 1e-11
FP236842_2383(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/9... 74 1e-11
CP000606_1448(CP000606|pid:none) Shewanella loihica PV-4, comple... 74 1e-11
CP000509_4546(CP000509|pid:none) Nocardioides sp. JS614, complet... 74 1e-11
(Q921N6) RecName: Full=Probable ATP-dependent RNA helicase DDX27... 74 1e-11
(Q5ACK7) RecName: Full=ATP-dependent RNA helicase DRS1; ... 74 1e-11
CP001055_760(CP001055|pid:none) Elusimicrobium minutum Pei191, c... 74 1e-11
CP000246_1729(CP000246|pid:none) Clostridium perfringens ATCC 13... 74 1e-11
>(Q54VF1) RecName: Full=Probable ATP-dependent RNA helicase ddx56;
EC=3.6.1.-; AltName: Full=DEAD box protein 56;
Length = 685
Score = 325 bits (834), Expect = 1e-87
Identities = 169/198 (85%), Positives = 169/198 (85%)
Frame = +2
Query: 560 NKGIALSFVTYHNEELLKKVSKTRGDAGYNLKPFEFKMNAIEGFRYRVEDVLRTIGIRAI 739
NKGIALSFVTYHNEELLKKVSKTRGDAGYNLKPFEFKMNAIEGFRYRVEDVLRTIGIRAI
Sbjct: 463 NKGIALSFVTYHNEELLKKVSKTRGDAGYNLKPFEFKMNAIEGFRYRVEDVLRTIGIRAI 522
Query: 740 KEAXXXXXXXXXXXXXXXXSHFSENPQDLLALKHDTTLIKKQVPLHLRVVPEYLLPTQFK 919
KEA SHFSENPQDLLALKHDTTLIKKQVPLHLRVVPEYLLPTQFK
Sbjct: 523 KEAKKTELKQELLNNEKLKSHFSENPQDLLALKHDTTLIKKQVPLHLRVVPEYLLPTQFK 582
Query: 920 NHADQKLEIIPSRPQSGHHGTTGRSLGVNKKLEQKKRKKDILKTLSIKKNTTLTGEELAQ 1099
NHADQKLEIIPSRPQSGHHGTTGRSLGVNKKLEQKKRKKDILKTLSIKKNTTLTGEELAQ
Sbjct: 583 NHADQKLEIIPSRPQSGHHGTTGRSLGVNKKLEQKKRKKDILKTLSIKKNTTLTGEELAQ 642
Query: 1100 AXXXXXXXXXXXXXGNIS 1153
A GNIS
Sbjct: 643 ARSKSLIKRLKIKEGNIS 660
Score = 205 bits (522), Expect = 2e-51
Identities = 110/136 (80%), Positives = 111/136 (81%)
Frame = +2
Query: 122 VEXXVSSDLIDLKCTFXSMGLDNXILXALKXMGFQNPSLVQSKSIPLSLQGKDILXKAXT 301
VE VSSDLIDL+CTF SMGLDN IL ALK MGFQNPSLVQSKSIPLSLQGKDIL KA T
Sbjct: 10 VEDSVSSDLIDLECTFESMGLDNRILRALKKMGFQNPSLVQSKSIPLSLQGKDILAKART 69
Query: 302 GSGKTAAYSIPIIQKVLMAKXKSNIKGVKAVVLVPTRELCEQVXNHFNXXXXXXXXXXXX 481
GSGKTAAYSIPIIQKVLMAK KSNIKGVKAVVLVPTRELCEQV NHFN
Sbjct: 70 GSGKTAAYSIPIIQKVLMAKEKSNIKGVKAVVLVPTRELCEQVKNHFNQVSYYCQQLVSV 129
Query: 482 XXXGNDKTLDEQKGLL 529
GNDKTLDEQKGLL
Sbjct: 130 VQLGNDKTLDEQKGLL 145
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,408,443,438
Number of extensions: 26814273
Number of successful extensions: 52541
Number of sequences better than 10.0: 3293
Number of HSP's gapped: 50548
Number of HSP's successfully gapped: 3346
Length of query: 391
Length of database: 1,051,180,864
Length adjustment: 130
Effective length of query: 261
Effective length of database: 630,428,194
Effective search space: 164541758634
Effective search space used: 164541758634
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
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