| Contig-U12542-1 |
| Contig ID |
Contig-U12542-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1305 |
| Chromosome number (1..6, M) |
4 |
| Chromosome length |
5430582 |
| Start point |
1441778 |
| End point |
1443078 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
2 |
| Number of EST |
3 |
| Link to clone list |
U12542 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.12. 2 |
| Homology vs DNA |
Query= Contig-U12542-1 (Contig-U12542-1Q) /CSM_Contig/Contig-U12542-1Q.Seq.d
(1315 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ444924) Dictyostelium discoideum cDNA clone:ddv57k21, 3' ... 571 0.0 3
(BJ427357) Dictyostelium discoideum cDNA clone:ddv62l06, 5' ... 428 0.0 3
(BJ426027) Dictyostelium discoideum cDNA clone:ddv57k21, 5' ... 256 e-147 4
(AB005232) Arabidopsis thaliana genomic DNA, chromosome 5, P... 62 6e-05 1
(AE017308) Mycoplasma mobile 163K complete genome. 40 0.004 13
(AC210135) Populus trichocarpa clone POP101-G08, complete se... 54 0.014 1
(DY892573) CeleSEQ11137 Cunninghamella elegans pBluescript (... 54 0.014 1
(DY892454) CeleSEQ10693 Cunninghamella elegans pBluescript (... 54 0.014 1
(DY888304) CeleSEQ5152 Cunninghamella elegans pBluescript (E... 54 0.014 1
(DY962059) CLSM12377.b1_A23.ab1 CLS(LMS) lettuce sativa Lact... 52 0.054 1
(DW105290) CLRX3113.b1_A11.ab1 CLR(XYZ) lettuce serriola Lac... 52 0.054 1
(DW105273) CLRX3096.b1_O05.ab1 CLR(XYZ) lettuce serriola Lac... 52 0.054 1
(AU292106) Zinnia elegans cDNA, clone:Z6832, primer:M13 forw... 52 0.054 1
(BG890068) EST515919 cSTD Solanum tuberosum cDNA clone cSTD1... 40 0.17 2
(AY096431) Arabidopsis thaliana putative DEAD box helicase p... 50 0.22 1
(AY070052) Arabidopsis thaliana putative DEAD box helicase p... 50 0.22 1
(AP001303) Arabidopsis thaliana genomic DNA, chromosome 3, T... 50 0.22 1
(BX823774) Arabidopsis thaliana Full-length cDNA Complete se... 50 0.22 1
(AL394294) T3 end of clone AR0AA016C02 of library AR0AA from... 50 0.22 1
(EG506158) AYBGV11TF pooled cDNA populations Arabidopsis tha... 50 0.22 1
(DR368564) 12846964 CERES-AN65 Arabidopsis thaliana cDNA clo... 50 0.22 1
(FG607111) stem_S018_H10.SEQ Opium poppy stem cDNA library P... 50 0.22 1
(EY884220) LT33-C1-003-092-B12-CT.F Tahiti lime leaf, greenh... 50 0.22 1
(DQ366729) Uncultured Prochlorococcus marinus clone HF10-88H... 40 0.59 2
(AG280550) Mus musculus molossinus DNA, clone:MSMg01-051O19.... 38 0.59 2
(FE752818) CAYF2558.b1 CAYF Petrolisthes cinctipes heart, wh... 42 0.60 2
(BX005287) Zebrafish DNA sequence from clone DKEY-65J6 in li... 46 0.78 3
(CR545469) Zebrafish DNA sequence from clone DKEY-151K14 in ... 46 0.83 3
(BC123291) Xenopus laevis DEAD (Asp-Glu-Ala-Asp) box polypep... 48 0.85 1
(BC097636) Xenopus laevis DEAD (Asp-Glu-Ala-Asp) box polypep... 48 0.85 1
(AC132387) Mus musculus BAC clone RP23-440M14 from 1, comple... 48 0.85 1
(AC124672) Mus musculus chromosome 1, clone RP23-328G14, com... 48 0.85 1
(AM480901) Vitis vinifera contig VV78X219749.4, whole genome... 48 0.85 1
(AC126323) Homo sapiens chromosome 15, clone RP11-299H22, co... 48 0.85 1
(AC097500) Homo sapiens BAC clone RP11-335G13 from 2, comple... 48 0.85 1
(AC021460) Homo sapiens chromosome 15, clone RP11-259F15, co... 48 0.85 1
(AC132789) Rattus norvegicus clone CH230-268H24, WORKING DRA... 48 0.85 1
(AC128114) Rattus norvegicus clone CH230-413M22, WORKING DRA... 48 0.85 1
(AC087483) Homo sapiens chromosome 15 clone RP11-546I14 map ... 48 0.85 1
(AC074095) Homo sapiens chromosome 15 clone RP11-324A21, WOR... 48 0.85 1
(AC068126) Homo sapiens chromosome 15 clone RP11-546I14, WOR... 48 0.85 1
(AC168213) Mus musculus chromosome 18 clone RP23-257A21 map ... 48 0.85 1
(CT519322) A BAC library has been constructed from cultivar ... 48 0.85 1
(ES945698) 49RDOATR_UP_029_F01_24OCT2004_005 Brassica olerac... 48 0.85 1
(EE528567) 38RDBRM_UP_067_H06_08DEC2005_034 Brassica rapa 38... 48 0.85 1
(EE427508) 33ETGS36_UP_001_B04_15MAR2004_030 Brassica napus ... 48 0.85 1
(EC754139) PPE00005920 Agencourt Biosciences Agen-0020 Non-n... 48 0.85 1
(DY892362) CeleSEQ10566 Cunninghamella elegans pBluescript (... 48 0.85 1
(DY888984) CeleSEQ6441 Cunninghamella elegans pBluescript (E... 48 0.85 1
(DY566663) AGENCOURT_69715944 NICHD_XGC_Ov1 Xenopus laevis c... 48 0.85 1
(DT571837) EST1082477 GH_TMO Gossypium hirsutum cDNA, mRNA s... 48 0.85 1
(DC134422) Xenopus laevis NBRP cDNA clone:xl338f18, 5' end. 48 0.85 1
(DC133158) Xenopus laevis NBRP cDNA clone:xl333k07, 5' end. 48 0.85 1
(DC131956) Xenopus laevis NBRP cDNA clone:xl329l06, 5' end. 48 0.85 1
(DC118715) Xenopus laevis NBRP cDNA clone:xl284f06, 5' end. 48 0.85 1
(DC063337) Xenopus laevis NBRP cDNA clone:xlk157k17ex, 5' end. 48 0.85 1
(DC060991) Xenopus laevis NBRP cDNA clone:xlk7b14ex, 5' end. 48 0.85 1
(CO094930) GR__Ea17F02.r GR__Ea Gossypium raimondii cDNA clo... 48 0.85 1
(AJ763890) Gerbera hybrid cv. 'Terra Regina' EST, clone G000... 48 0.85 1
(AJ752904) Gerbera hybrid cv. 'Terra Regina' EST, clone G000... 48 0.85 1
(CF286812) AGENCOURT_15182412 NICHD_XGC_Emb4 Xenopus laevis ... 48 0.85 1
(CF285890) AGENCOURT_15182848 NICHD_XGC_Emb4 Xenopus laevis ... 48 0.85 1
(CD836292) BN45.048E18F020104 BN45 Brassica napus cDNA clone... 48 0.85 1
(BU569718) AGENCOURT_10352490 NIH_MGC_82 Homo sapiens cDNA c... 48 0.85 1
(BJ627543) Xenopus laevis cDNA clone:XL218h01, 5' end. 48 0.85 1
(BJ619487) Xenopus laevis cDNA clone:XL189g14, 5' end. 48 0.85 1
(BJ073357) Xenopus laevis cDNA clone:XL109m05, 5' end, singl... 48 0.85 1
(BJ061135) Xenopus laevis cDNA clone:XL072b08, 5' end, singl... 48 0.85 1
(EY261872) BF01013B1D12.f1 Normalized subtracted keck librar... 48 0.85 1
(EY257290) BF01016B2B10.f1 Normalized subtracted keck librar... 48 0.85 1
(EY255578) BF01028A2A11.f1 Normalized subtracted keck librar... 48 0.85 1
(EX021325) BR005969 light-chilled whole plant cDNA library K... 48 0.85 1
(AM541321) Paracentrotus lividus EST, clone MPMGp1171J1472Q,... 44 0.95 2
(AP009271) Solanum lycopersicum genomic DNA, chromosome 8, c... 36 1.4 6
(AC118367) Rattus norvegicus clone CH230-293J19, *** SEQUENC... 34 1.4 7
(AC194105) Zea mays chromosome 6 clone CH201-244H9; ZMMBBc02... 34 1.7 2
(BG781815) SEAUMC001758 Sea urchin primary mesenchyme cell c... 36 2.3 2
(DX510370) 764_4_14172909_5489_43757_035 Arachis batizocoi m... 34 2.3 2
(CR388419) Zebrafish DNA sequence from clone DKEY-40C17 in l... 46 2.3 3
(ET786709) CHO_OF637xa04f1.ab1 CHO_OF Nicotiana tabacum geno... 32 2.4 2
(AC005505) Plasmodium falciparum chromosome 12 clone 3D7, **... 36 3.0 9
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 40 3.0 9
(EY494269) CBBP19921.fwd CBBP Hirudo medicinalis hermaphrodi... 36 3.3 2
(BX119987) Zebrafish DNA sequence from clone DKEY-242G16 in ... 46 3.4 1
(BV439933) S237P6145FD10.T0 PortugueseWaterDog Canis familia... 46 3.4 1
(AC122397) Mus musculus BAC clone RP24-90D21 from chromosome... 46 3.4 1
(CP000498) Pichia stipitis CBS 6054 chromosome 4, complete s... 46 3.4 1
(AC111267) Rattus norvegicus clone CH230-41C7, *** SEQUENCIN... 46 3.4 1
(AC214892) Procavia capensis clone CH280-484L4, WORKING DRAF... 46 3.4 1
(FH734126) CHO_OF5124xp19f1.ab1 CHO_OF5 Nicotiana tabacum ge... 46 3.4 1
(FH719377) CHO_OF5060xm13f1.ab1 CHO_OF5 Nicotiana tabacum ge... 46 3.4 1
(FH696402) CHO_OF5133xm20r1.ab1 CHO_OF5 Nicotiana tabacum ge... 46 3.4 1
(FH627239) CHO_OF4551xd21r1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 3.4 1
(FH627183) CHO_OF4551xd21f1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 3.4 1
(FH076199) CHO_OF3696xn21r1.ab1 CHO_OF3 Nicotiana tabacum ge... 46 3.4 1
(EJ464314) 1095388024736 Global-Ocean-Sampling_GS-28-01-01-1... 46 3.4 1
(DH822549) Rattus norvegicus DNA, BAC clone: RNB1-426O15, 3'... 46 3.4 1
(CE792222) tigr-gss-dog-17000330894205 Dog Library Canis lup... 46 3.4 1
(CE623930) tigr-gss-dog-17000313644732 Dog Library Canis lup... 46 3.4 1
(DY391388) CL__Eb0005G08.r CL__Eb Curcuma longa cDNA clone C... 46 3.4 1
>(BJ444924) Dictyostelium discoideum cDNA clone:ddv57k21, 3' end,
single read.
Length = 636
Score = 571 bits (288), Expect(3) = 0.0
Identities = 288/288 (100%)
Strand = Plus / Minus
Query: 681 actaatattgaaaaattatttgatcgtaagaatgcaaatgttatgtgtgaaacttatcaa 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 actaatattgaaaaattatttgatcgtaagaatgcaaatgttatgtgtgaaacttatcaa 577
Query: 741 aaacttagaactaaagaagaggatgaagaggatgattcaatgtttgttgtaaagagaaga 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 aaacttagaactaaagaagaggatgaagaggatgattcaatgtttgttgtaaagagaaga 517
Query: 801 gatcatgatttagataatttagatatcgttaaaagattaagtagaaaagaaaataaagaa 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gatcatgatttagataatttagatatcgttaaaagattaagtagaaaagaaaataaagaa 457
Query: 861 aagaatttcattaatgatccaactaaattgaaattccaagaatcaacatctgttccaaaa 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aagaatttcattaatgatccaactaaattgaaattccaagaatcaacatctgttccaaaa 397
Query: 921 gatggtaaattaccaacatcatacattgaaaaggtaaagagtgaagtt 968
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gatggtaaattaccaacatcatacattgaaaaggtaaagagtgaagtt 349
Score = 167 bits (84), Expect(3) = 0.0
Identities = 90/90 (100%)
Strand = Plus / Minus
Query: 1226 agaatctgaatctgaagaacaaccaaaaccaatcactaaaaagagaactctgaagatcan 1285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 agaatctgaatctgaagaacaaccaaaaccaatcactaaaaagagaactctgaagatcan 32
Query: 1286 aagaaagtgcactcaaattctnaaaaagaa 1315
||||||||||||||||||||||||||||||
Sbjct: 31 aagaaagtgcactcaaattctnaaaaagaa 2
Score = 129 bits (65), Expect(3) = 0.0
Identities = 65/65 (100%)
Strand = Plus / Minus
Query: 1056 caatcaggtggtggtgctactggtgatgatgaagaagaaagtgttgcttatttcgtacca 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caatcaggtggtggtgctactggtgatgatgaagaagaaagtgttgcttatttcgtacca 202
Query: 1116 ccagg 1120
|||||
Sbjct: 201 ccagg 197
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,138,183,937
Number of extensions: 77277543
Number of successful extensions: 6977257
Number of sequences better than 10.0: 157
Length of query: 1315
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1291
Effective length of database: 97,308,875,965
Effective search space: 125625758870815
Effective search space used: 125625758870815
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7. 3 |
| Homology vs Protein |
Query= Contig-U12542-1 (Contig-U12542-1Q) /CSM_Contig/Contig-U12542-1Q.Seq.d
(1315 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q54Q94) RecName: Full=Probable ATP-dependent RNA helicase ddx10... 275 3e-72
AM424362_1(AM424362|pid:none) Vitis vinifera contig VV78X014989.... 94 8e-18
CP000588_120(CP000588|pid:none) Ostreococcus lucimarinus CCE9901... 93 2e-17
CR954208_131(CR954208|pid:none) Ostreococcus tauri strain OTTH05... 87 1e-15
(Q0D622) RecName: Full=DEAD-box ATP-dependent RNA helicase 32; ... 86 3e-15
(Q75C76) RecName: Full=ATP-dependent RNA helicase DBP4; ... 84 1e-14
(Q5AF95) RecName: Full=ATP-dependent RNA helicase DBP4; ... 84 1e-14
(Q1EB31) RecName: Full=ATP-dependent RNA helicase DBP4; ... 83 2e-14
CP001141_37(CP001141|pid:none) Phaeodactylum tricornutum CCAP 10... 82 3e-14
CU928171_320(CU928171|pid:none) Kluyveromyces thermotolerans str... 82 3e-14
CP001141_38(CP001141|pid:none) Phaeodactylum tricornutum CCAP 10... 82 3e-14
(Q4IEK8) RecName: Full=ATP-dependent RNA helicase HAS1; ... 82 4e-14
(Q6BXG0) RecName: Full=ATP-dependent RNA helicase DBP4; ... 81 1e-13
CU633453_30(CU633453|pid:none) Podospora anserina genomic DNA ch... 81 1e-13
AM920436_2095(AM920436|pid:none) Penicillium chrysogenum Wiscons... 80 2e-13
(Q0CMM5) RecName: Full=ATP-dependent RNA helicase dbp4; ... 80 2e-13
(Q7S2N9) RecName: Full=ATP-dependent RNA helicase has-1; ... 79 3e-13
(Q0UMB9) RecName: Full=ATP-dependent RNA helicase DBP4; ... 79 5e-13
(Q4WM60) RecName: Full=ATP-dependent RNA helicase dbp4; ... 78 6e-13
(A1DNF9) RecName: Full=ATP-dependent RNA helicase dbp4; ... 78 8e-13
AB209884_1(AB209884|pid:none) Homo sapiens mRNA for DEAD (Asp-Gl... 77 1e-12
BC023303_1(BC023303|pid:none) Mus musculus DEAD (Asp-Glu-Ala-Asp... 77 1e-12
AK045032_1(AK045032|pid:none) Mus musculus 9.5 days embryo parth... 77 1e-12
(Q80Y44) RecName: Full=Probable ATP-dependent RNA helicase DDX10... 77 1e-12
BC049217_1(BC049217|pid:none) Homo sapiens DEAD (Asp-Glu-Ala-Asp... 77 1e-12
(Q13206) RecName: Full=Probable ATP-dependent RNA helicase DDX10... 77 1e-12
BC123579_1(BC123579|pid:none) Bos taurus DEAD (Asp-Glu-Ala-Asp) ... 77 1e-12
(Q9UTP9) RecName: Full=ATP-dependent RNA helicase dbp4; ... 77 2e-12
(A4RGU2) RecName: Full=ATP-dependent RNA helicase DBP4; ... 76 2e-12
CU633897_223(CU633897|pid:none) Podospora anserina genomic DNA c... 76 2e-12
(Q7RZ35) RecName: Full=ATP-dependent RNA helicase dbp-4; ... 76 3e-12
(Q6CGD1) RecName: Full=ATP-dependent RNA helicase DBP4; ... 76 3e-12
FN392322_230(FN392322|pid:none) Pichia pastoris GS115 chromosome... 75 5e-12
AC024753_1(AC024753|pid:none) Caenorhabditis elegans cosmid Y23H... 75 7e-12
(A5DLF4) RecName: Full=ATP-dependent RNA helicase DBP4; ... 75 7e-12
(Q5ZJF6) RecName: Full=Probable ATP-dependent RNA helicase DDX10... 74 1e-11
AE014298_2713(AE014298|pid:none) Drosophila melanogaster chromos... 74 1e-11
(A1CIQ5) RecName: Full=ATP-dependent RNA helicase has1; ... 74 2e-11
(A4R8B5) RecName: Full=ATP-dependent RNA helicase HAS1; ... 73 2e-11
(Q4WQM4) RecName: Full=ATP-dependent RNA helicase has1; ... 72 3e-11
(Q1EA54) RecName: Full=ATP-dependent RNA helicase HAS1; ... 72 4e-11
EU955902_1(EU955902|pid:none) Zea mays clone 1551052 unknown mRNA. 71 8e-11
(Q0CZS8) RecName: Full=ATP-dependent RNA helicase has1; ... 71 1e-10
(A5DID7) RecName: Full=ATP-dependent RNA helicase HAS1; ... 71 1e-10
(Q4IAS1) RecName: Full=ATP-dependent RNA helicase DBP4; ... 71 1e-10
BC146615_1(BC146615|pid:none) Xenopus tropicalis DEAD (Asp-Glu-A... 70 1e-10
BC123291_1(BC123291|pid:none) Xenopus laevis DEAD (Asp-Glu-Ala-A... 70 1e-10
(Q09916) RecName: Full=ATP-dependent RNA helicase has1; ... 70 1e-10
(Q74Z73) RecName: Full=ATP-dependent RNA helicase HAS1; ... 70 2e-10
(Q03532) RecName: Full=ATP-dependent RNA helicase HAS1; ... 70 2e-10
(Q6FIL3) RecName: Full=ATP-dependent RNA helicase HAS1; ... 70 2e-10
(Q6BH93) RecName: Full=ATP-dependent RNA helicase HAS1; ... 70 2e-10
AE014187_180(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 70 2e-10
(Q5KBE2) RecName: Full=ATP-dependent rRNA helicase RRP3; ... 69 3e-10
(Q5AK59) RecName: Full=ATP-dependent RNA helicase HAS1; ... 69 3e-10
(Q5KN79) RecName: Full=ATP-dependent RNA helicase DBP4; ... 69 3e-10
BX538351_40(BX538351|pid:none) Cryptosporidium parvum chromosome... 69 4e-10
FM992692_434(FM992692|pid:none) Candida dubliniensis CD36 chromo... 69 4e-10
CU928176_320(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 69 4e-10
AM494965_141(AM494965|pid:none) Leishmania braziliensis chromoso... 69 5e-10
(A5E2Z9) RecName: Full=ATP-dependent RNA helicase HAS1; ... 69 5e-10
AP008212_1263(AP008212|pid:none) Oryza sativa (japonica cultivar... 69 5e-10
(A2Q9T6) RecName: Full=ATP-dependent RNA helicase has1; ... 68 6e-10
AM502246_137(AM502246|pid:none) Leishmania infantum chromosome 28. 68 6e-10
(Q2UUN6) RecName: Full=ATP-dependent RNA helicase has1; ... 68 6e-10
AP007150_203(AP007150|pid:none) Aspergillus oryzae RIB40 genomic... 68 6e-10
CT005266_137(CT005266|pid:none) Leishmania major strain Friedlin... 68 8e-10
CP000082_943(CP000082|pid:none) Psychrobacter arcticus 273-4, co... 68 8e-10
CP000323_1469(CP000323|pid:none) Psychrobacter cryohalolentis K5... 68 8e-10
AM450508_2(AM450508|pid:none) Vitis vinifera contig VV78X275787.... 68 8e-10
FM992695_847(FM992695|pid:none) Candida dubliniensis CD36 chromo... 67 1e-09
AM920437_343(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 67 1e-09
AL844505_304(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 67 1e-09
BA000012_173(BA000012|pid:none) Mesorhizobium loti MAFF303099 DN... 67 2e-09
(Q0JL73) RecName: Full=DEAD-box ATP-dependent RNA helicase 26; ... 67 2e-09
(Q6C7D2) RecName: Full=ATP-dependent RNA helicase HAS1; ... 67 2e-09
AP003328_5(AP003328|pid:none) Oryza sativa Japonica Group genomi... 67 2e-09
(Q6CXB7) RecName: Full=ATP-dependent RNA helicase HAS1; ... 67 2e-09
AB006697_17(AB006697|pid:none) Arabidopsis thaliana genomic DNA,... 66 3e-09
AJ010474_1(AJ010474|pid:none) Arabidopsis thaliana mRNA for DEAD... 66 3e-09
(Q9FNM7) RecName: Full=DEAD-box ATP-dependent RNA helicase 26; ... 66 3e-09
(A3LS22) RecName: Full=ATP-dependent rRNA helicase RRP3; ... 65 4e-09
EU559167_80(EU559167|pid:none) Candidatus Nitrospira defluvii Co... 65 4e-09
(Q9SB89) RecName: Full=DEAD-box ATP-dependent RNA helicase 27; ... 65 4e-09
(Q5ACU6) RecName: Full=ATP-dependent rRNA helicase RRP3; ... 65 5e-09
AM889285_3225(AM889285|pid:none) Gluconacetobacter diazotrophicu... 65 5e-09
(Q6CH58) RecName: Full=ATP-dependent rRNA helicase RRP3; ... 65 7e-09
(Q54S03) RecName: Full=Probable ATP-dependent RNA helicase ddx18... 65 7e-09
(Q5ZBH5) RecName: Full=DEAD-box ATP-dependent RNA helicase 25; ... 65 7e-09
AY035114_1(AY035114|pid:none) Arabidopsis thaliana putative RNA ... 64 9e-09
CP000626_76(CP000626|pid:none) Vibrio cholerae O395 chromosome 1... 64 9e-09
AE003853_61(AE003853|pid:none) Vibrio cholerae O1 biovar eltor s... 64 9e-09
CU459003_3981(CU459003|pid:none) Magnetospirillum gryphiswaldens... 64 9e-09
AY811663_1(AY811663|pid:none) Schistosoma japonicum SJCHGC05414 ... 64 1e-08
AP007255_1385(AP007255|pid:none) Magnetospirillum magneticum AMB... 64 2e-08
BT054072_1(BT054072|pid:none) Zea mays full-length cDNA clone ZM... 64 2e-08
CP000781_3174(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 63 2e-08
CP000158_690(CP000158|pid:none) Hyphomonas neptunium ATCC 15444,... 63 2e-08
(Q5ACK7) RecName: Full=ATP-dependent RNA helicase DRS1; ... 63 2e-08
(A5DQF1) RecName: Full=ATP-dependent rRNA helicase RRP3; ... 63 2e-08
CP000661_353(CP000661|pid:none) Rhodobacter sphaeroides ATCC 170... 63 3e-08
CP000360_2889(CP000360|pid:none) Acidobacteria bacterium Ellin34... 63 3e-08
CP000112_152(CP000112|pid:none) Desulfovibrio desulfuricans G20,... 63 3e-08
AM494972_203(AM494972|pid:none) Leishmania braziliensis chromoso... 63 3e-08
CP000251_2947(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 63 3e-08
FN357844_7(FN357844|pid:none) Schistosoma mansoni genome sequenc... 63 3e-08
CP000774_3234(CP000774|pid:none) Parvibaculum lavamentivorans DS... 63 3e-08
CP001359_3124(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 62 4e-08
FN317190_1(FN317190|pid:none) Schistosoma japonicum isolate Anhu... 62 4e-08
AC116668_29(AC116668|pid:none) Trypanosoma brucei chromosome 5 c... 62 4e-08
AP004745_1(AP004745|pid:none) Oryza sativa Japonica Group genomi... 62 5e-08
BX950851_709(BX950851|pid:none) Erwinia carotovora subsp. atrose... 62 5e-08
AP009384_2366(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 62 6e-08
CP001010_1054(CP001010|pid:none) Polynucleobacter necessarius su... 62 6e-08
(Q9VD51) RecName: Full=Probable ATP-dependent RNA helicase pitch... 62 6e-08
AM747721_177(AM747721|pid:none) Burkholderia cenocepacia J2315 c... 62 6e-08
(A2QCW6) RecName: Full=ATP-dependent RNA helicase dbp9; ... 62 6e-08
AK075864_1(AK075864|pid:none) Mus musculus adult male tongue cDN... 62 6e-08
CP000090_39(CP000090|pid:none) Ralstonia eutropha JMP134 chromos... 62 6e-08
U84552_1(U84552|pid:none) Drosophila melanogaster helicase pitch... 62 6e-08
CP001078_3210(CP001078|pid:none) Clostridium botulinum E3 str. A... 62 6e-08
CP000282_618(CP000282|pid:none) Saccharophagus degradans 2-40, c... 61 8e-08
CP001389_1495(CP001389|pid:none) Rhizobium sp. NGR234, complete ... 61 8e-08
CP001196_3362(CP001196|pid:none) Oligotropha carboxidovorans OM5... 61 8e-08
CP001013_616(CP001013|pid:none) Leptothrix cholodnii SP-6, compl... 61 8e-08
CP000927_2735(CP000927|pid:none) Caulobacter sp. K31, complete g... 61 8e-08
(Q756G5) RecName: Full=ATP-dependent RNA helicase DBP8; ... 61 8e-08
AM746676_701(AM746676|pid:none) Sorangium cellulosum 'So ce 56' ... 61 8e-08
BX842649_257(BX842649|pid:none) Bdellovibrio bacteriovorus compl... 61 8e-08
AJ719804_1(AJ719804|pid:none) Gallus gallus mRNA for hypothetica... 61 8e-08
AE017285_3293(AE017285|pid:none) Desulfovibrio vulgaris subsp. v... 61 8e-08
CP000471_1621(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 61 8e-08
CP001486_511(CP001486|pid:none) Vibrio cholerae MJ-1236 chromoso... 61 8e-08
CP001026_145(CP001026|pid:none) Burkholderia ambifaria MC40-6 ch... 61 8e-08
BC068907_1(BC068907|pid:none) Xenopus laevis hypothetical protei... 61 8e-08
CP000655_600(CP000655|pid:none) Polynucleobacter necessarius sub... 61 1e-07
CP001229_1425(CP001229|pid:none) Sulfurihydrogenibium azorense A... 61 1e-07
CP001133_558(CP001133|pid:none) Vibrio fischeri MJ11 chromosome ... 61 1e-07
CP000301_3659(CP000301|pid:none) Rhodopseudomonas palustris BisB... 61 1e-07
(Q921N6) RecName: Full=Probable ATP-dependent RNA helicase DDX27... 61 1e-07
AM711867_1243(AM711867|pid:none) Clavibacter michiganensis subsp... 61 1e-07
CP000264_1200(CP000264|pid:none) Jannaschia sp. CCS1, complete g... 60 1e-07
CP001056_3425(CP001056|pid:none) Clostridium botulinum B str. Ek... 60 1e-07
(Q4X0C2) RecName: Full=ATP-dependent RNA helicase dbp9; ... 60 1e-07
CP000653_3567(CP000653|pid:none) Enterobacter sp. 638, complete ... 60 1e-07
CP001113_3310(CP001113|pid:none) Salmonella enterica subsp. ente... 60 1e-07
CP000685_4534(CP000685|pid:none) Flavobacterium johnsoniae UW101... 60 1e-07
(Q4I830) RecName: Full=ATP-dependent RNA helicase DRS1; ... 60 1e-07
CP000394_1317(CP000394|pid:none) Granulibacter bethesdensis CGDN... 60 1e-07
AB0901(AB0901) ATP-dependent RNA helicase (dead-box protein) [im... 60 1e-07
AM933172_3101(AM933172|pid:none) Salmonella enterica subsp. ente... 60 1e-07
AM933173_3060(AM933173|pid:none) Salmonella enterica subsp. ente... 60 1e-07
CP000113_2243(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 60 2e-07
AI0423(AI0423) cold-shock dead-box protein A [imported] - Yersin... 60 2e-07
AY811954_1(AY811954|pid:none) Schistosoma japonicum SJCHGC07723 ... 60 2e-07
AF542976_3(AF542976|pid:none) Yersinia enterocolitica PNPase (pn... 60 2e-07
(P0C2N8) RecName: Full=ATP-dependent RNA helicase drs-1; ... 60 2e-07
CP000414_398(CP000414|pid:none) Leuconostoc mesenteroides subsp.... 60 2e-07
AE005673_832(AE005673|pid:none) Caulobacter crescentus CB15, com... 60 2e-07
AY614597_1(AY614597|pid:none) Oncorhynchus mykiss myc-regulated ... 60 2e-07
CP000950_3677(CP000950|pid:none) Yersinia pseudotuberculosis YPI... 60 2e-07
(A1DHV3) RecName: Full=ATP-dependent RNA helicase dbp9; ... 60 2e-07
(Q5KIK3) RecName: Full=ATP-dependent RNA helicase DRS1; ... 60 2e-07
BA000038_360(BA000038|pid:none) Vibrio vulnificus YJ016 DNA, chr... 60 2e-07
AE016796_1430(AE016796|pid:none) Vibrio vulnificus CMCP6 chromos... 60 2e-07
CP000449_1347(CP000449|pid:none) Maricaulis maris MCS10, complet... 60 2e-07
CP000416_486(CP000416|pid:none) Lactobacillus brevis ATCC 367, c... 60 2e-07
FM954973_196(FM954973|pid:none) Vibrio splendidus LGP32 chromoso... 60 2e-07
JX0314(JX0314) DEAD box protein - Klebsiella pneumoniae &L08387... 60 2e-07
CP001150_849(CP001150|pid:none) Rhodobacter sphaeroides KD131 ch... 60 2e-07
(Q5AZA6) RecName: Full=ATP-dependent RNA helicase dbp9; ... 60 2e-07
AP008208_322(AP008208|pid:none) Oryza sativa (japonica cultivar-... 60 2e-07
FJ665613_1(FJ665613|pid:none) Trachemys scripta vasa-like protei... 60 2e-07
CP000282_3026(CP000282|pid:none) Saccharophagus degradans 2-40, ... 60 2e-07
CP000390_1762(CP000390|pid:none) Mesorhizobium sp. BNC1, complet... 60 2e-07
CP001016_106(CP001016|pid:none) Beijerinckia indica subsp. indic... 60 2e-07
CP000577_1185(CP000577|pid:none) Rhodobacter sphaeroides ATCC 17... 60 2e-07
CP000661_1966(CP000661|pid:none) Rhodobacter sphaeroides ATCC 17... 60 2e-07
CP001615_579(CP001615|pid:none) Exiguobacterium sp. AT1b, comple... 60 2e-07
CP000097_442(CP000097|pid:none) Synechococcus sp. CC9902, comple... 59 3e-07
AC009404_1(AC009404|pid:none) Homo sapiens BAC clone RP11-28H22 ... 59 3e-07
AE005174_3458(AE005174|pid:none) Escherichia coli O157:H7 EDL933... 59 3e-07
AM260525_831(AM260525|pid:none) Bartonella tribocorum CIP 105476... 59 3e-07
AE005674_2638(AE005674|pid:none) Shigella flexneri 2a str. 301, ... 59 3e-07
CP001392_482(CP001392|pid:none) Diaphorobacter sp. TPSY, complet... 59 3e-07
CP000009_190(CP000009|pid:none) Gluconobacter oxydans 621H, comp... 59 3e-07
(Q9NVP1) RecName: Full=ATP-dependent RNA helicase DDX18; ... 59 3e-07
AE014075_3826(AE014075|pid:none) Escherichia coli CFT073, comple... 59 3e-07
CP001600_447(CP001600|pid:none) Edwardsiella ictaluri 93-146, co... 59 3e-07
CR457060_1(CR457060|pid:none) Homo sapiens full open reading fra... 59 3e-07
CR860036_1(CR860036|pid:none) Pongo abelii mRNA; cDNA DKFZp459G0... 59 3e-07
CP000036_2416(CP000036|pid:none) Shigella boydii Sb227, complete... 59 3e-07
(Q8XA87) RecName: Full=Cold-shock DEAD box protein A; E... 59 3e-07
CP000243_3526(CP000243|pid:none) Escherichia coli UTI89, complet... 59 3e-07
CP001280_793(CP001280|pid:none) Methylocella silvestris BL2, com... 59 3e-07
(Q6K7R9) RecName: Full=DEAD-box ATP-dependent RNA helicase 48; ... 59 3e-07
(P0A9P6) RecName: Full=Cold-shock DEAD box protein A; E... 59 3e-07
CU928164_3636(CU928164|pid:none) Escherichia coli IAI39 chromoso... 59 3e-07
CP000964_1195(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 59 3e-07
S71758(S71758) DEAD box protein MrDb, Myc-regulated - human &X9... 59 3e-07
CP001022_2890(CP001022|pid:none) Exiguobacterium sibiricum 255-1... 59 3e-07
CP000034_3099(CP000034|pid:none) Shigella dysenteriae Sd197, com... 59 3e-07
CR378664_198(CR378664|pid:none) Photobacterium profundum SS9; se... 59 3e-07
CP000509_4546(CP000509|pid:none) Nocardioides sp. JS614, complet... 59 3e-07
BC001238_1(BC001238|pid:none) Homo sapiens DEAD (Asp-Glu-Ala-Asp... 59 3e-07
BX538353_46(BX538353|pid:none) Cryptosporidium parvum chromosome... 59 3e-07
EU897153_1(EU897153|pid:none) Escherichia coli strain TB182A ATP... 59 3e-07
M63288_1(M63288|pid:none) E.coli deaD gene, complete cds. 59 3e-07
(Q09719) RecName: Full=ATP-dependent RNA helicase dbp10; ... 59 3e-07
EU956781_1(EU956781|pid:none) Zea mays clone 1573776 ATP-depende... 59 3e-07
(P21507) RecName: Full=ATP-dependent RNA helicase srmB; ... 59 3e-07
CP000569_569(CP000569|pid:none) Actinobacillus pleuropneumoniae ... 59 3e-07
BT084880_1(BT084880|pid:none) Zea mays full-length cDNA clone ZM... 59 3e-07
CP000539_3560(CP000539|pid:none) Acidovorax sp. JS42, complete g... 59 3e-07
AE005674_3205(AE005674|pid:none) Shigella flexneri 2a str. 301, ... 59 3e-07
AP008232_913(AP008232|pid:none) Sodalis glossinidius str. 'morsi... 59 3e-07
CP001097_1785(CP001097|pid:none) Chlorobium limicola DSM 245, co... 59 3e-07
CP000671_352(CP000671|pid:none) Haemophilus influenzae PittEE, c... 59 3e-07
AB168247_1(AB168247|pid:none) Macaca fascicularis testis cDNA cl... 59 3e-07
CU928160_3221(CU928160|pid:none) Escherichia coli IAI1 chromosom... 59 3e-07
CP000513_822(CP000513|pid:none) Dichelobacter nodosus VCS1703A, ... 59 3e-07
EU894953_1(EU894953|pid:none) Escherichia coli strain TB182A ind... 59 3e-07
CP000850_4344(CP000850|pid:none) Salinispora arenicola CNS-205, ... 59 4e-07
AP007255_1428(AP007255|pid:none) Magnetospirillum magneticum AMB... 59 4e-07
(A5DLE0) RecName: Full=ATP-dependent RNA helicase DBP8; ... 59 4e-07
BC011927_1(BC011927|pid:none) Homo sapiens DEAD (Asp-Glu-Ala-Asp... 59 4e-07
EU718675_1(EU718675|pid:none) Homo sapiens DEAD box polypeptide ... 59 4e-07
AM422018_155(AM422018|pid:none) Candidatus Phytoplasma australie... 59 4e-07
(Q5KMN6) RecName: Full=ATP-dependent RNA helicase HAS1; ... 59 4e-07
(Q2UFL0) RecName: Full=ATP-dependent RNA helicase dbp9; ... 59 4e-07
CP001052_1212(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 59 4e-07
CP000783_652(CP000783|pid:none) Enterobacter sakazakii ATCC BAA-... 59 4e-07
(Q9LIH9) RecName: Full=DEAD-box ATP-dependent RNA helicase 51; ... 59 4e-07
CU234118_971(CU234118|pid:none) Bradyrhizobium sp. ORS278,comple... 59 4e-07
(Q9BXF0) RecName: Full=Probable ATP-dependent RNA helicase DDX27... 59 4e-07
CR954210_35(CR954210|pid:none) Ostreococcus tauri strain OTTH059... 59 4e-07
AK300135_1(AK300135|pid:none) Homo sapiens cDNA FLJ61659 complet... 59 4e-07
CP000882_148(CP000882|pid:none) Hemiselmis andersenii chromosome... 59 4e-07
CP000828_1632(CP000828|pid:none) Acaryochloris marina MBIC11017,... 59 4e-07
BX897699_634(BX897699|pid:none) Bartonella henselae strain Houst... 59 4e-07
CU928170_296(CU928170|pid:none) Kluyveromyces thermotolerans str... 59 4e-07
CP000462_718(CP000462|pid:none) Aeromonas hydrophila subsp. hydr... 59 4e-07
AP007151_1052(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 59 5e-07
CP001177_2400(CP001177|pid:none) Bacillus cereus AH187, complete... 59 5e-07
CP000377_1809(CP000377|pid:none) Silicibacter sp. TM1040, comple... 59 5e-07
AE016825_1003(AE016825|pid:none) Chromobacterium violaceum ATCC ... 59 5e-07
CP000152_2946(CP000152|pid:none) Burkholderia sp. 383 chromosome... 59 5e-07
AE010300_3432(AE010300|pid:none) Leptospira interrogans serovar ... 59 5e-07
(Q4WJE9) RecName: Full=ATP-dependent rRNA helicase rrp3; ... 59 5e-07
AM398681_1649(AM398681|pid:none) Flavobacterium psychrophilum JI... 59 5e-07
CP001562_653(CP001562|pid:none) Bartonella grahamii as4aup, comp... 59 5e-07
AE016877_2261(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 59 5e-07
CP000034_2624(CP000034|pid:none) Shigella dysenteriae Sd197, com... 59 5e-07
AE017355_2235(AE017355|pid:none) Bacillus thuringiensis serovar ... 59 5e-07
CP000656_3934(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 59 5e-07
AL646052_2209(AL646052|pid:none) Ralstonia solanacearum GMI1000 ... 59 5e-07
CP000108_1099(CP000108|pid:none) Chlorobium chlorochromatii CaD3... 59 5e-07
CP000001_2195(CP000001|pid:none) Bacillus cereus E33L, complete ... 59 5e-07
CP000227_2291(CP000227|pid:none) Bacillus cereus Q1, complete ge... 59 5e-07
CP001186_2268(CP001186|pid:none) Bacillus cereus G9842, complete... 59 5e-07
CP001091_2095(CP001091|pid:none) Actinobacillus pleuropneumoniae... 59 5e-07
CP000109_1015(CP000109|pid:none) Thiomicrospira crunogena XCL-2,... 59 5e-07
AE014188_490(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 59 5e-07
CP000497_674(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 59 5e-07
EU970970_1(EU970970|pid:none) Zea mays clone 354947 unknown mRNA. 59 5e-07
(A3LSN3) RecName: Full=ATP-dependent RNA helicase DRS1; ... 59 5e-07
(P0C2N7) RecName: Full=ATP-dependent RNA helicase DRS1; ... 59 5e-07
AE006468_2573(AE006468|pid:none) Salmonella enterica subsp. ente... 59 5e-07
AM412317_641(AM412317|pid:none) Clostridium botulinum A str. ATC... 59 5e-07
FM178380_439(FM178380|pid:none) Aliivibrio salmonicida LFI1238 c... 59 5e-07
CP000908_3926(CP000908|pid:none) Methylobacterium extorquens PA1... 59 5e-07
CP000436_712(CP000436|pid:none) Haemophilus somnus 129PT, comple... 59 5e-07
(Q4L7W0) RecName: Full=Probable DEAD-box ATP-dependent RNA helic... 59 5e-07
CP001598_2141(CP001598|pid:none) Bacillus anthracis str. A0248, ... 59 5e-07
AD0830(AD0830) ATP-dependent RNA helicase SrmB [imported] - Salm... 59 5e-07
CP001600_2932(CP001600|pid:none) Edwardsiella ictaluri 93-146, c... 59 5e-07
(A1CNV8) RecName: Full=ATP-dependent RNA helicase drs1; ... 59 5e-07
(A4QYM6) RecName: Full=ATP-dependent RNA helicase DRS1; ... 59 5e-07
(Q9SA27) RecName: Full=Putative DEAD-box ATP-dependent RNA helic... 58 7e-07
CU695239_158(CU695239|pid:none) Ralstonia solanacearum strain Mo... 58 7e-07
CU928162_2940(CU928162|pid:none) Escherichia coli ED1a chromosom... 58 7e-07
AM236080_2595(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 58 7e-07
EF152995_5(EF152995|pid:none) Serratia marcescens Ung (ung), hyp... 58 7e-07
BX571870_119(BX571870|pid:none) Photorhabdus luminescens subsp. ... 58 7e-07
CP001191_1895(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 58 7e-07
AE017143_179(AE017143|pid:none) Haemophilus ducreyi strain 35000... 58 7e-07
(Q15N18) RecName: Full=ATP-dependent RNA helicase rhlB; ... 58 7e-07
AM167904_3340(AM167904|pid:none) Bordetella avium 197N complete ... 58 7e-07
(A1D1R8) RecName: Full=ATP-dependent RNA helicase drs1; ... 58 7e-07
(A7TS37) RecName: Full=ATP-dependent rRNA helicase RRP3; ... 58 7e-07
AE009948_288(AE009948|pid:none) Streptococcus agalactiae 2603V/R... 58 7e-07
DQ158858_7(DQ158858|pid:none) Bigelowiella natans nucleomorph ch... 58 9e-07
CP000903_2232(CP000903|pid:none) Bacillus weihenstephanensis KBA... 58 9e-07
CP001124_185(CP001124|pid:none) Geobacter bemidjiensis Bem, comp... 58 9e-07
AE017194_2490(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 58 9e-07
EU278597_1(EU278597|pid:none) Trichosurus vulpecula VASA mRNA, p... 58 9e-07
FM211050_25(FM211050|pid:none) Photorhabdus asymbiotica subsp. a... 58 9e-07
CP000822_4434(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 58 9e-07
CP000075_3790(CP000075|pid:none) Pseudomonas syringae pv. syring... 58 9e-07
CP000746_2023(CP000746|pid:none) Actinobacillus succinogenes 130... 58 9e-07
(P34580) RecName: Full=Putative ATP-dependent RNA helicase T26G1... 58 9e-07
(Q6FW42) RecName: Full=ATP-dependent RNA helicase DRS1; ... 58 9e-07
AE017221_1889(AE017221|pid:none) Thermus thermophilus HB27, comp... 58 9e-07
CP000423_2419(CP000423|pid:none) Lactobacillus casei ATCC 334, c... 58 9e-07
CP001001_3757(CP001001|pid:none) Methylobacterium radiotolerans ... 58 9e-07
(Q8SR01) RecName: Full=ATP-dependent RNA helicase DBP4; ... 58 9e-07
AE016853_1551(AE016853|pid:none) Pseudomonas syringae pv. tomato... 58 9e-07
FM954972_454(FM954972|pid:none) Vibrio splendidus LGP32 chromoso... 58 9e-07
BX897700_657(BX897700|pid:none) Bartonella quintana str. Toulous... 58 9e-07
CP000783_3459(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 58 9e-07
CP000323_1374(CP000323|pid:none) Psychrobacter cryohalolentis K5... 58 9e-07
BC096848_1(BC096848|pid:none) Danio rerio DEAD (Asp-Glu-Ala-Asp)... 58 9e-07
CP000961_1729(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 58 9e-07
CP000103_2635(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 58 9e-07
X97017_1(X97017|pid:none) T.thermophilus DNA for RNA dependent A... 58 9e-07
CP000891_2922(CP000891|pid:none) Shewanella baltica OS195, compl... 58 9e-07
CP000115_313(CP000115|pid:none) Nitrobacter winogradskyi Nb-255,... 58 9e-07
CP001052_29(CP001052|pid:none) Burkholderia phytofirmans PsJN ch... 58 9e-07
CP001189_3244(CP001189|pid:none) Gluconacetobacter diazotrophicu... 58 9e-07
CP000614_2376(CP000614|pid:none) Burkholderia vietnamiensis G4 c... 57 1e-06
CP000250_1789(CP000250|pid:none) Rhodopseudomonas palustris HaA2... 57 1e-06
CP000825_1234(CP000825|pid:none) Prochlorococcus marinus str. MI... 57 1e-06
CP000230_1910(CP000230|pid:none) Rhodospirillum rubrum ATCC 1117... 57 1e-06
(Q54TJ4) RecName: Full=Probable ATP-dependent RNA helicase ddx27... 57 1e-06
CR555306_2554(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 57 1e-06
CP001252_1519(CP001252|pid:none) Shewanella baltica OS223, compl... 57 1e-06
CP000753_2779(CP000753|pid:none) Shewanella baltica OS185, compl... 57 1e-06
CP000117_1948(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 57 1e-06
CP001186_218(CP001186|pid:none) Bacillus cereus G9842, complete ... 57 1e-06
CP001189_2523(CP001189|pid:none) Gluconacetobacter diazotrophicu... 57 1e-06
CP000011_1860(CP000011|pid:none) Burkholderia mallei ATCC 23344 ... 57 1e-06
CP000267_3519(CP000267|pid:none) Rhodoferax ferrireducens T118, ... 57 1e-06
CP000885_1978(CP000885|pid:none) Clostridium phytofermentans ISD... 57 1e-06
CP000563_2748(CP000563|pid:none) Shewanella baltica OS155, compl... 57 1e-06
AK133366_1(AK133366|pid:none) Mus musculus adult male testis cDN... 57 1e-06
AE015928_1885(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 57 1e-06
(Q6CXW0) RecName: Full=ATP-dependent RNA helicase DBP8; ... 57 1e-06
CP000613_846(CP000613|pid:none) Rhodospirillum centenum SW, comp... 57 1e-06
(Q75EW9) RecName: Full=ATP-dependent rRNA helicase RRP3; ... 57 1e-06
CP000943_6154(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 57 1e-06
CP000672_613(CP000672|pid:none) Haemophilus influenzae PittGG, c... 57 1e-06
(Q64060) RecName: Full=Probable ATP-dependent RNA helicase DDX4;... 57 1e-06
AE016796_140(AE016796|pid:none) Vibrio vulnificus CMCP6 chromoso... 57 1e-06
CP001083_643(CP001083|pid:none) Clostridium botulinum Ba4 str. 6... 57 1e-06
CP000830_1326(CP000830|pid:none) Dinoroseobacter shibae DFL 12, ... 57 1e-06
CP000577_2458(CP000577|pid:none) Rhodobacter sphaeroides ATCC 17... 57 1e-06
CU928175_590(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 57 1e-06
CP001503_2521(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 57 1e-06
CP000056_1400(CP000056|pid:none) Streptococcus pyogenes MGAS6180... 57 1e-06
FP236842_994(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/96... 57 1e-06
CP001056_1406(CP001056|pid:none) Clostridium botulinum B str. Ek... 57 1e-06
AE009949_1378(AE009949|pid:none) Streptococcus pyogenes MGAS8232... 57 1e-06
BC157772_1(BC157772|pid:none) Xenopus tropicalis hypothetical pr... 57 1e-06
CP000697_2601(CP000697|pid:none) Acidiphilium cryptum JF-5, comp... 57 1e-06
(Q09903) RecName: Full=ATP-dependent RNA helicase drs1; ... 57 1e-06
(A4REU9) RecName: Full=ATP-dependent RNA helicase MAK5; ... 57 1e-06
CP000667_4033(CP000667|pid:none) Salinispora tropica CNB-440, co... 57 1e-06
CU633749_23(CU633749|pid:none) Cupriavidus taiwanensis str. LMG1... 57 1e-06
A97581(A97581) ATP-dependent RNA helicase rhle VCA0204 [imported... 57 1e-06
CP000116_1733(CP000116|pid:none) Thiobacillus denitrificans ATCC... 57 1e-06
CP000509_4513(CP000509|pid:none) Nocardioides sp. JS614, complet... 57 1e-06
CP000094_1436(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 57 1e-06
CP001068_2376(CP001068|pid:none) Ralstonia pickettii 12J chromos... 57 1e-06
CP000503_2227(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 57 1e-06
BC161525_1(BC161525|pid:none) Xenopus tropicalis hypothetical pr... 57 1e-06
CP000259_1359(CP000259|pid:none) Streptococcus pyogenes MGAS9429... 57 1e-06
(Q1E1N5) RecName: Full=ATP-dependent rRNA helicase RRP3; ... 57 1e-06
(A2QAX7) RecName: Full=ATP-dependent RNA helicase drs1; ... 57 1e-06
(A7EAY2) RecName: Full=ATP-dependent RNA helicase mak5; ... 57 1e-06
AE004092_1279(AE004092|pid:none) Streptococcus pyogenes M1 GAS, ... 57 1e-06
CP000469_2909(CP000469|pid:none) Shewanella sp. ANA-3, complete ... 57 1e-06
AM920431_1322(AM920431|pid:none) Penicillium chrysogenum Wiscons... 57 1e-06
CU928166_128(CU928166|pid:none) Kluyveromyces thermotolerans str... 57 2e-06
BX640434_6(BX640434|pid:none) Bordetella parapertussis strain 12... 57 2e-06
FP236842_367(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/96... 57 2e-06
AF2395(AF2395) ATP-dependent RNA helicase [imported] - Nostoc sp... 57 2e-06
CP000435_1024(CP000435|pid:none) Synechococcus sp. CC9311, compl... 57 2e-06
(A1D405) RecName: Full=ATP-dependent rRNA helicase rrp3; ... 57 2e-06
CP000551_1204(CP000551|pid:none) Prochlorococcus marinus str. AS... 57 2e-06
CP001029_2468(CP001029|pid:none) Methylobacterium populi BJ001, ... 57 2e-06
(Q3MSQ8) RecName: Full=Probable ATP-dependent RNA helicase DDX4;... 57 2e-06
AY648729_1(AY648729|pid:none) Danio rerio DEAD box polypeptide 2... 57 2e-06
CP000082_1082(CP000082|pid:none) Psychrobacter arcticus 273-4, c... 57 2e-06
CP001022_831(CP001022|pid:none) Exiguobacterium sibiricum 255-15... 57 2e-06
CP000769_3459(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 57 2e-06
AM286415_960(AM286415|pid:none) Yersinia enterocolitica subsp. e... 57 2e-06
(Q5KPU1) RecName: Full=ATP-dependent RNA helicase DBP8; ... 57 2e-06
CP000003_1410(CP000003|pid:none) Streptococcus pyogenes MGAS1039... 57 2e-06
CP001016_1747(CP001016|pid:none) Beijerinckia indica subsp. indi... 57 2e-06
CP001298_2663(CP001298|pid:none) Methylobacterium chloromethanic... 57 2e-06
CP000283_2453(CP000283|pid:none) Rhodopseudomonas palustris BisB... 57 2e-06
AM181176_4429(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 57 2e-06
(P32892) RecName: Full=ATP-dependent RNA helicase DRS1; ... 56 3e-06
AM747720_2408(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 56 3e-06
CP000828_126(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 56 3e-06
BX640437_205(BX640437|pid:none) Bordetella bronchiseptica strain... 56 3e-06
(Q73EU1) RecName: Full=DEAD-box ATP-dependent RNA helicase cshA;... 56 3e-06
AP009247_838(AP009247|pid:none) Candidatus Vesicomyosocius okuta... 56 3e-06
CP000153_1937(CP000153|pid:none) Sulfurimonas denitrificans DSM ... 56 3e-06
CU633900_249(CU633900|pid:none) Podospora anserina genomic DNA c... 56 3e-06
AM920427_1267(AM920427|pid:none) Penicillium chrysogenum Wiscons... 56 3e-06
CP000821_2387(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 56 3e-06
AE003852_648(AE003852|pid:none) Vibrio cholerae O1 biovar eltor ... 56 3e-06
CP001069_531(CP001069|pid:none) Ralstonia pickettii 12J chromoso... 56 3e-06
CP000949_3802(CP000949|pid:none) Pseudomonas putida W619, comple... 56 3e-06
(Q0INC5) RecName: Full=DEAD-box ATP-dependent RNA helicase 28; ... 56 3e-06
CP000627_180(CP000627|pid:none) Vibrio cholerae O395 chromosome ... 56 3e-06
(Q4IJ56) RecName: Full=ATP-dependent RNA helicase DBP9; ... 56 3e-06
AE009442_188(AE009442|pid:none) Xylella fastidiosa Temecula1, co... 56 3e-06
CP001011_190(CP001011|pid:none) Xylella fastidiosa M23, complete... 56 3e-06
BX640420_113(BX640420|pid:none) Bordetella pertussis strain Toha... 56 3e-06
CP000378_1692(CP000378|pid:none) Burkholderia cenocepacia AU 105... 56 3e-06
EU957034_1(EU957034|pid:none) Zea mays clone 1581050 ATP-depende... 56 3e-06
CP001504_178(CP001504|pid:none) Burkholderia glumae BGR1 chromos... 56 3e-06
CP000440_2346(CP000440|pid:none) Burkholderia ambifaria AMMD chr... 56 3e-06
CP000868_957(CP000868|pid:none) Burkholderia multivorans ATCC 17... 56 3e-06
CT573326_3659(CT573326|pid:none) Pseudomonas entomophila str. L4... 56 3e-06
AE015451_4472(AE015451|pid:none) Pseudomonas putida KT2440 compl... 56 3e-06
CP001055_760(CP001055|pid:none) Elusimicrobium minutum Pei191, c... 56 3e-06
(Q63GX5) RecName: Full=DEAD-box ATP-dependent RNA helicase cshA;... 56 3e-06
CP000644_2314(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 56 3e-06
AP006840_1647(AP006840|pid:none) Symbiobacterium thermophilum IA... 56 3e-06
CP000090_896(CP000090|pid:none) Ralstonia eutropha JMP134 chromo... 56 3e-06
CU928174_244(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 56 3e-06
CP000712_1359(CP000712|pid:none) Pseudomonas putida F1, complete... 56 3e-06
CP000487_756(CP000487|pid:none) Campylobacter fetus subsp. fetus... 56 3e-06
(Q2YUH3) RecName: Full=Probable DEAD-box ATP-dependent RNA helic... 56 3e-06
CP000926_4013(CP000926|pid:none) Pseudomonas putida GB-1, comple... 56 3e-06
CP001321_1790(CP001321|pid:none) Haemophilus parasuis SH0165, co... 56 3e-06
CP000139_386(CP000139|pid:none) Bacteroides vulgatus ATCC 8482, ... 56 3e-06
AM910996_684(AM910996|pid:none) Plasmodium knowlesi strain H chr... 56 3e-06
CP000941_194(CP000941|pid:none) Xylella fastidiosa M12, complete... 56 3e-06
AP009153_2770(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 56 3e-06
CP001013_2983(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 56 3e-06
CP000435_1269(CP000435|pid:none) Synechococcus sp. CC9311, compl... 56 3e-06
(A0R8U6) RecName: Full=DEAD-box ATP-dependent RNA helicase cshA;... 56 3e-06
(Q65RG7) RecName: Full=ATP-dependent RNA helicase rhlB; ... 56 3e-06
CP000931_2990(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 56 3e-06
CP001078_1324(CP001078|pid:none) Clostridium botulinum E3 str. A... 56 3e-06
CR954202_287(CR954202|pid:none) Ostreococcus tauri strain OTTH05... 56 3e-06
AD0330(AD0330) ATP-dependent RNA helicase [imported] - Yersinia ... 56 3e-06
AP008232_1795(AP008232|pid:none) Sodalis glossinidius str. 'mors... 56 3e-06
(A7EML8) RecName: Full=ATP-dependent rRNA helicase rrp3; ... 56 3e-06
CP000020_1810(CP000020|pid:none) Vibrio fischeri ES114 chromosom... 56 3e-06
CP000517_221(CP000517|pid:none) Lactobacillus helveticus DPC 457... 56 3e-06
CP000249_3764(CP000249|pid:none) Frankia sp. CcI3, complete geno... 56 3e-06
CP001139_1842(CP001139|pid:none) Vibrio fischeri MJ11 chromosome... 56 3e-06
CP000681_2480(CP000681|pid:none) Shewanella putrefaciens CN-32, ... 56 3e-06
CU207211_422(CU207211|pid:none) Herminiimonas arsenicoxydans chr... 56 3e-06
CP000510_810(CP000510|pid:none) Psychromonas ingrahamii 37, comp... 56 3e-06
CP001103_681(CP001103|pid:none) Alteromonas macleodii 'Deep ecot... 56 3e-06
CP000720_1103(CP000720|pid:none) Yersinia pseudotuberculosis IP ... 56 3e-06
(Q2GUI4) RecName: Full=ATP-dependent RNA helicase DBP3; ... 56 3e-06
CP000407_1731(CP000407|pid:none) Streptococcus suis 05ZYH33, com... 56 3e-06
AE003852_1386(AE003852|pid:none) Vibrio cholerae O1 biovar eltor... 56 3e-06
CP000764_1715(CP000764|pid:none) Bacillus cereus subsp. cytotoxi... 56 3e-06
D14859_1(D14859|pid:none) Mus musculus mRNA for Drosophila vasa ... 56 3e-06
AM902716_925(AM902716|pid:none) Bordetella petrii strain DSM 128... 56 3e-06
(A6RUH2) RecName: Full=ATP-dependent RNA helicase drs1; ... 56 3e-06
CP000512_1122(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 56 3e-06
CP000023_1570(CP000023|pid:none) Streptococcus thermophilus LMG ... 56 3e-06
CP000777_2032(CP000777|pid:none) Leptospira biflexa serovar Pato... 56 3e-06
AM910986_17(AM910986|pid:none) Plasmodium knowlesi strain H chro... 56 3e-06
CP000934_306(CP000934|pid:none) Cellvibrio japonicus Ueda107, co... 56 3e-06
(A6ZT77) RecName: Full=ATP-dependent RNA helicase DBP8; ... 56 3e-06
(Q6BTL5) RecName: Full=ATP-dependent RNA helicase DRS1; ... 56 3e-06
FM178379_2189(FM178379|pid:none) Aliivibrio salmonicida LFI1238 ... 55 4e-06
CP000821_4020(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 55 4e-06
CP000667_2072(CP000667|pid:none) Salinispora tropica CNB-440, co... 55 4e-06
CP000283_3494(CP000283|pid:none) Rhodopseudomonas palustris BisB... 55 4e-06
CP000850_2174(CP000850|pid:none) Salinispora arenicola CNS-205, ... 55 4e-06
(Q6GWX0) RecName: Full=Probable ATP-dependent RNA helicase DDX4;... 55 4e-06
CP000446_3408(CP000446|pid:none) Shewanella sp. MR-4, complete g... 55 4e-06
AE014134_3451(AE014134|pid:none) Drosophila melanogaster chromos... 55 4e-06
AY004154_1(AY004154|pid:none) Homo sapiens DEAD box RNA helicase... 55 4e-06
(Q29S22) RecName: Full=Probable ATP-dependent RNA helicase DDX47... 55 4e-06
CP000744_1649(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 55 4e-06
FN392321_754(FN392321|pid:none) Pichia pastoris GS115 chromosome... 55 4e-06
(A5DY34) RecName: Full=ATP-dependent RNA helicase DRS1; ... 55 4e-06
(A1CL59) RecName: Full=ATP-dependent rRNA helicase spb4; ... 55 4e-06
CP000891_1356(CP000891|pid:none) Shewanella baltica OS195, compl... 55 4e-06
AY121677_1(AY121677|pid:none) Drosophila melanogaster RE27528 fu... 55 4e-06
FN392321_837(FN392321|pid:none) Pichia pastoris GS115 chromosome... 55 4e-06
AB052858_1(AB052858|pid:none) Enterococcus faecium gene for auto... 55 4e-06
CP001349_6921(CP001349|pid:none) Methylobacterium nodulans ORS 2... 55 4e-06
CP000939_651(CP000939|pid:none) Clostridium botulinum B1 str. Ok... 55 4e-06
CP001100_309(CP001100|pid:none) Chloroherpeton thalassium ATCC 3... 55 4e-06
CP000383_989(CP000383|pid:none) Cytophaga hutchinsonii ATCC 3340... 55 4e-06
CP001196_1974(CP001196|pid:none) Oligotropha carboxidovorans OM5... 55 4e-06
AM920427_860(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 55 4e-06
CP000431_5979(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 55 4e-06
CP000753_1304(CP000753|pid:none) Shewanella baltica OS185, compl... 55 4e-06
CP001252_2961(CP001252|pid:none) Shewanella baltica OS223, compl... 55 4e-06
CP001339_96(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, co... 55 4e-06
AL137462_1(AL137462|pid:none) Homo sapiens mRNA; cDNA DKFZp434B1... 55 4e-06
(Q9NQI0) RecName: Full=Probable ATP-dependent RNA helicase DDX4;... 55 4e-06
(A7TJM9) RecName: Full=ATP-dependent RNA helicase DRS1; ... 55 4e-06
(A6RW56) RecName: Full=ATP-dependent rRNA helicase rrp3; ... 55 4e-06
(Q2FF45) RecName: Full=Probable DEAD-box ATP-dependent RNA helic... 55 4e-06
(Q1E2B2) RecName: Full=ATP-dependent RNA helicase DRS1; ... 55 4e-06
>(Q54Q94) RecName: Full=Probable ATP-dependent RNA helicase ddx10;
EC=3.6.1.-; AltName: Full=DEAD box protein 10;
Length = 878
Score = 275 bits (703), Expect = 3e-72
Identities = 143/160 (89%), Positives = 143/160 (89%)
Frame = +2
Query: 179 DAKIDKVDNKKIFHNRSSQKRIAKLKKIELQKKPLTLKLNEIKSIEQRLIDEAPQRGTNP 358
DAKIDKVDNKKIFHNRSSQKRIAKLKKIELQKKPLTLKLNEIKSIEQRLIDEAPQRGTNP
Sbjct: 47 DAKIDKVDNKKIFHNRSSQKRIAKLKKIELQKKPLTLKLNEIKSIEQRLIDEAPQRGTNP 106
Query: 359 LANISSXXXXXXXXXXXKNDXXXXXXYKIDYPSATDFKDLPISQLTLKALTESKFLKLTD 538
LANISS KND YKIDYPSATDFKDLPISQLTLKALTESKFLKLTD
Sbjct: 107 LANISSTTATTTTTTATKNDKEKEKEYKIDYPSATDFKDLPISQLTLKALTESKFLKLTD 166
Query: 539 IQRASLPHTLCGRDILGAAKTGSGKTLSFILPILETLWRN 658
IQRASLPHTLCGRDILGAAKTGSGKTLSFILPILETLWRN
Sbjct: 167 IQRASLPHTLCGRDILGAAKTGSGKTLSFILPILETLWRN 206
Score = 272 bits (696), Expect = 2e-71
Identities = 139/174 (79%), Positives = 139/174 (79%)
Frame = +3
Query: 681 TNIEKLFDRKNANVMCETYQKLRTKEEDEEDDSMFVVKRRDHDLDNLDIVKRLSRKENKE 860
TNIEKLFDRKNANVM ETYQKLRTKEEDEEDDSMFVVKRRDHDLDNLDIVKRLSRKENKE
Sbjct: 664 TNIEKLFDRKNANVMSETYQKLRTKEEDEEDDSMFVVKRRDHDLDNLDIVKRLSRKENKE 723
Query: 861 KNFINDPTKLKFQESTSVPKDGKLPTSYIEKVKSEVEKGDVQDKIXXXXXXXXXXXXXXX 1040
KNFINDPTKLKFQESTSVPKDGKLPTSYIEKVKSEVEKGDVQDKI
Sbjct: 724 KNFINDPTKLKFQESTSVPKDGKLPTSYIEKVKSEVEKGDVQDKILLKERLKRKKLKLQS 783
Query: 1041 XXXXXXXGGGATGDDEEESVAYFVPPGEKDPYENGXXXXXXXXXXXXVWGQEYN 1202
GGGATGDDEEESVAYFVPPGEKDPYENG VWGQEYN
Sbjct: 784 KELRKQSGGGATGDDEEESVAYFVPPGEKDPYENGENDSDDESNDDDVWGQEYN 837
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,078,692,466
Number of extensions: 16445196
Number of successful extensions: 60299
Number of sequences better than 10.0: 2961
Number of HSP's gapped: 59937
Number of HSP's successfully gapped: 2974
Length of query: 438
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 306
Effective length of database: 623,955,076
Effective search space: 190930253256
Effective search space used: 190930253256
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
2 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |