Contig-U12507-1 |
Contig ID |
Contig-U12507-1 |
Contig update |
2002.12.18 |
Contig sequence |
|
Gap |
gap included |
Contig length |
1821 |
Chromosome number (1..6, M) |
- |
Chromosome length |
- |
Start point |
- |
End point |
- |
Strand (PLUS/MINUS) |
- |
Number of clones |
2 |
Number of EST |
3 |
Link to clone list |
U12507 |
List of clone(s) |
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.10 |
Homology vs CSM-cDNA |
|
dna update |
2008.12. 1 |
Homology vs DNA |
Query= Contig-U12507-1 (Contig-U12507-1Q) /CSM_Contig/Contig-U12507-1Q.Seq.d (1831 letters)
Database: ddbj_A 92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(BJ442156) Dictyostelium discoideum cDNA clone:ddv49b06, 3' ... 807 0.0 3 (AU060826) Dictyostelium discoideum slug cDNA, clone SLB614. 977 0.0 1 (AU033919) Dictyostelium discoideum slug cDNA, clone SLB614. 694 0.0 2 (BJ423380) Dictyostelium discoideum cDNA clone:ddv49b06, 5' ... 454 e-164 4 (AC115479) Rattus norvegicus clone CH230-236B21, *** SEQUENC... 58 1e-05 7 (AL670941) Mouse DNA sequence from clone RP23-291M22 on chro... 62 8e-05 1 (AC118760) Rattus norvegicus clone CH230-152E16, *** SEQUENC... 62 8e-05 1 (AC114446) Rattus norvegicus clone CH230-288N15, WORKING DRA... 62 8e-05 1 (AC103458) Rattus norvegicus clone CH230-38P18, WORKING DRAF... 62 8e-05 1 (AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ... 42 1e-04 9 (AC154842) Mus musculus BAC clone RP23-55C11 from chromosome... 50 2e-04 2 (AL663054) Mouse DNA sequence from clone RP23-480G5 on chrom... 60 3e-04 1 (AL627222) Mouse DNA sequence from clone RP23-265A5 on chrom... 60 3e-04 1 (AC161218) Mus musculus chromosome 7, clone RP24-161J8, comp... 60 3e-04 1 (AC159993) Mus musculus chromosome 8, clone RP23-39P7, compl... 60 3e-04 1 (AC159281) Mus musculus BAC clone RP23-321H9 from chromosome... 60 3e-04 1 (AC156934) Mus musculus BAC clone RP24-425B15 from 7, comple... 60 3e-04 1 (AC154610) Mus musculus BAC clone RP23-335A11 from chromosom... 60 3e-04 1 (AC153624) Mus musculus 6 BAC RP23-117P3 (Roswell Park Cance... 60 3e-04 1 (AC122256) Mus musculus BAC clone RP23-178H7 from 7, complet... 60 3e-04 1 (AC119162) Mus musculus chromosome 3, clone RP23-231L12, com... 60 3e-04 1 (AC111117) Mus musculus chromosome 1, clone RP23-214P23, com... 60 3e-04 1 (AC145851) Dasypus novemcinctus clone VMRC5-509I16, complete... 60 3e-04 1 (AC151900) Mus musculus chromosome 7 clone RP23-312G12, WORK... 60 3e-04 1 (AC148739) Oryctolagus cuniculus clone LB1-10B23, WORKING DR... 60 3e-04 1 (AC123122) Rattus norvegicus clone CH230-17H14, *** SEQUENCI... 60 3e-04 1 (AC120735) Rattus norvegicus clone CH230-255L7, *** SEQUENCI... 60 3e-04 1 (AC111241) Rattus norvegicus clone CH230-232I8, WORKING DRAF... 60 3e-04 1 (AC098028) Rattus norvegicus clone CH230-100E6, WORKING DRAF... 60 3e-04 1 (AC095637) Rattus norvegicus clone CH230-8K5, *** SEQUENCING... 60 3e-04 1 (AC087129) Mus musculus clone RP23-106A10, WORKING DRAFT SEQ... 60 3e-04 1 (AC084829) Mus musculus clone RP23-314F23, *** SEQUENCING IN... 60 3e-04 1 (AC079574) Mus musculus clone RP23-84J17, WORKING DRAFT SEQU... 60 3e-04 1 (AP003647) Mus musculus genomic DNA, chromosome unknown clon... 60 3e-04 1 (AC173917) Atelerix albiventris clone LB4-121F16, WORKING DR... 60 3e-04 1 (AC164497) Oryctolagus cuniculus clone LB1-320B23, WORKING D... 60 3e-04 1 (AZ454867) 1M0257E01F Mouse 10kb plasmid UUGC1M library Mus ... 60 3e-04 1 (CR170617) Forward strand read from insert in 3'HPRT inserti... 60 3e-04 1 (AC116960) Dictyostelium discoideum chromosome 2 map complem... 42 4e-04 11 (AC141540) Rattus norvegicus clone CH230-502J11, WORKING DRA... 54 4e-04 2 (AC095399) Rattus norvegicus clone CH230-7B22, WORKING DRAFT... 58 5e-04 5 (CE284950) tigr-gss-dog-17000333794087 Dog Library Canis lup... 58 6e-04 2 (CE318191) tigr-gss-dog-17000360497339 Dog Library Canis lup... 50 6e-04 2 (AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 46 0.001 10 (AC116551) Dictyostelium discoideum chromosome 2 map complem... 46 0.001 15 (G79465) S208P6502RF5.T0 129S1/SvImJ Mus musculus STS genomi... 58 0.001 1 (BV434071) S237P6227RB12.T0 PortugueseWaterDog Canis familia... 58 0.001 1 (BV424860) S237P6196FC6.T0 PortugueseWaterDog Canis familiar... 58 0.001 1 (BV411389) S229P6391RD3.T0 GermanShepherd Canis familiaris S... 58 0.001 1 (BV390420) S243P665FF12.T0 CaliforniaCoyote Canis latrans ST... 58 0.001 1 (BV385894) S244P6212FG4.T0 AlaskaGrayWolf Canis lupus STS ge... 58 0.001 1 (BV367276) S231P6153RG10.T0 BedlingtonTerrier Canis familiar... 58 0.001 1 (BV361536) S231P6385RG10.T0 BedlingtonTerrier Canis familiar... 58 0.001 1 (BV355269) S231P668FG12.T0 BedlingtonTerrier Canis familiari... 58 0.001 1 (BV334808) S230P6348RG2.T0 Rottweiler Canis familiaris STS g... 58 0.001 1 (BV324502) S241P694FG7.T0 IndiaGrayWolf Canis lupus STS geno... 58 0.001 1 (BV296270) S239P6277FD12.T0 ChinaGrayWolf Canis lupus STS ge... 58 0.001 1 (BV294780) S232P633FE12.T0 Beagle Canis familiaris STS genom... 58 0.001 1 (BV257425) S235P6427FF9.T0 ItalianGreyhound Canis familiaris... 58 0.001 1 (BV053666) S212P6028FE10.T1 CZECHII/Ei Mus musculus STS geno... 58 0.001 1 (BV032224) S208P6760RG12.T0 129S1/SvImJ Mus musculus STS gen... 58 0.001 1 (BV025655) S208P6535FA10.T0 129S1/SvImJ Mus musculus STS gen... 58 0.001 1 (EU007907) Mus musculus arachidonate 15-lipoxygenase (Alox15... 58 0.001 1 (CU407108) Mouse DNA sequence from clone CH29-75G18 on chrom... 58 0.001 1 (CU406969) Mouse DNA sequence from clone CH29-624A16 on chro... 58 0.001 1 (CU210899) Mouse DNA sequence from clone CH29-2E15 on chromo... 58 0.001 1 (CT573086) Mouse DNA sequence from clone RP23-163K5 on chrom... 58 0.001 1 (CT571245) Mouse DNA sequence from clone RP23-2N7 on chromos... 58 0.001 1 (CT033750) Mouse DNA sequence from clone RP23-263M5 on chrom... 58 0.001 1 (CT030723) Mouse DNA sequence from clone RP23-33L24 on chrom... 58 0.001 1 (CT030722) Mouse DNA sequence from clone RP23-191N15 on chro... 58 0.001 1 (CT030702) Mouse DNA sequence from clone RP23-76I16 on chrom... 58 0.001 1 (CT030167) Mouse DNA sequence from clone RP23-333E24 on chro... 58 0.001 1 (CT010574) Mouse DNA sequence from clone RP23-269E16 on chro... 58 0.001 1 (CT010507) Mouse DNA sequence from clone RP23-259G10 on chro... 58 0.001 1 (CT009661) Mouse DNA sequence from clone CH29-621D18 on chro... 58 0.001 1 (CR933736) Mouse DNA sequence from clone DN-183N8 on chromos... 58 0.001 1 (CR933542) Mouse DNA sequence from clone DN-476D14 on chromo... 58 0.001 1 (BX682536) Mouse DNA sequence from clone RP23-190M5 on chrom... 58 0.001 1 (BX571885) Mouse DNA sequence from clone RP23-17O21 on chrom... 58 0.001 1 (BX470203) Mouse DNA sequence from clone RP23-290J11 on chro... 58 0.001 1 (BX005184) Mouse DNA sequence from clone RP23-476N7 on chrom... 58 0.001 1 (AY135691) Mus musculus argonaute 5 protein (Ago5) gene, par... 58 0.001 1 (AP003155) Mus musculus genomic DNA, chromosome 16q clone:RP... 58 0.001 1 (AP003149) Mus musculus genomic DNA, chromosome 16q clone:RP... 58 0.001 1 (AL929380) Mouse DNA sequence from clone RP23-467E8 on chrom... 58 0.001 1 (AL929303) Mouse DNA sequence from clone RP23-240M2 on chrom... 58 0.001 1 (AL928950) Mouse DNA sequence from clone RP23-70E1 on chromo... 58 0.001 1 (AL928812) Mouse DNA sequence from clone RP23-321B23 on chro... 58 0.001 1 (AL844534) Mouse DNA sequence from clone RP23-59M10 on chrom... 58 0.001 1 (AL837508) Mouse DNA sequence from clone RP23-256C7 on chrom... 58 0.001 1 (AL824704) Mouse DNA sequence from clone RP23-286H14 on chro... 58 0.001 1 (AL807249) Mouse DNA sequence from clone RP23-25C1 on chromo... 58 0.001 1 (AL732330) Mouse DNA sequence from clone RP23-130L11 on chro... 58 0.001 1 (AL672199) Mouse DNA sequence from clone RP23-171O21 on chro... 58 0.001 1 (AL672056) Mouse DNA sequence from clone RP23-467O2 on chrom... 58 0.001 1 (AL671858) Mouse DNA sequence from clone RP23-341B14 on chro... 58 0.001 1 (AL670227) Mouse DNA sequence from clone RP23-317N1 on chrom... 58 0.001 1 (AL669902) Mouse DNA sequence from clone RP23-459P8 on chrom... 58 0.001 1 (AL669869) Mouse DNA sequence from clone RP23-198E14 on chro... 58 0.001 1
>(BJ442156) Dictyostelium discoideum cDNA clone:ddv49b06, 3' end, single read. Length = 776
Score = 807 bits (407), Expect(3) = 0.0 Identities = 407/407 (100%) Strand = Plus / Minus
Query: 1343 caaacttttaaatcattgtcaacatcatcttcaacaccaaataatttatcacaatcatca 1402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 caaacttttaaatcattgtcaacatcatcttcaacaccaaataatttatcacaatcatca 405
Query: 1403 tcaccaaataatacattaactcattccatttcaagtggtggtaatggtacacaaccatta 1462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 tcaccaaataatacattaactcattccatttcaagtggtggtaatggtacacaaccatta 345
Query: 1463 tcaaatcaattaaataatagttcaaacactagtaatatcttttatcagagagttatattt 1522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 344 tcaaatcaattaaataatagttcaaacactagtaatatcttttatcagagagttatattt 285
Query: 1523 aaaagtataacattctctgatgtaaaagcgatttcagcattaaaaaattttaaagattct 1582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 aaaagtataacattctctgatgtaaaagcgatttcagcattaaaaaattttaaagattct 225
Query: 1583 ttccaagttgttacctctaaaaaagtttatacgtttgtggcaccaaacactgataataga 1642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 ttccaagttgttacctctaaaaaagtttatacgtttgtggcaccaaacactgataataga 165
Query: 1643 gataaatgggtttctgttttaaatgatcttcaacaacaattaactccaccaccttctcca 1702 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 gataaatgggtttctgttttaaatgatcttcaacaacaattaactccaccaccttctcca 105
Query: 1703 actttatcaagaagtaatagattcactggtagtttatcaccaacttt 1749 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104 actttatcaagaagtaatagattcactggtagtttatcaccaacttt 58
Score = 371 bits (187), Expect(3) = 0.0 Identities = 187/187 (100%) Strand = Plus / Minus
Query: 1031 atcgatgaaatcaaacaatcagtatttggtgcaaccgcaatcattggtcaaagtaaatac 1090 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 776 atcgatgaaatcaaacaatcagtatttggtgcaaccgcaatcattggtcaaagtaaatac 717
Query: 1091 attatggaaggtcaattatccctcttaaaaggtgttgtagcatcaactaaaaaagattta 1150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 attatggaaggtcaattatccctcttaaaaggtgttgtagcatcaactaaaaaagattta 657
Query: 1151 tttatttatttatttaaagattgtataatttgtacagaaattaattcaaactatcaaaaa 1210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 656 tttatttatttatttaaagattgtataatttgtacagaaattaattcaaactatcaaaaa 597
Query: 1211 gatggta 1217 ||||||| Sbjct: 596 gatggta 590
Score = 65.9 bits (33), Expect(3) = 0.0 Identities = 33/33 (100%) Strand = Plus / Minus
Query: 1762 tagaaattctgtacagttatcacaatcaaataa 1794 ||||||||||||||||||||||||||||||||| Sbjct: 45 tagaaattctgtacagttatcacaatcaaataa 13
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 92845959 Number of Hits to DB: 1,730,472,721 Number of extensions: 125199357 Number of successful extensions: 16249836 Number of sequences better than 10.0: 26283 Length of query: 1831 Length of database: 95,242,211,685 Length adjustment: 24 Effective length of query: 1807 Effective length of database: 97,308,875,965 Effective search space: 175837138868755 Effective search space used: 175837138868755 X1: 11 (21.8 bits) S2: 22 (44.1 bits)
|
protein update |
2009. 7. 3 |
Homology vs Protein |
Query= Contig-U12507-1 (Contig-U12507-1Q) /CSM_Contig/Contig-U12507-1Q.Seq.d (1831 letters)
Database: nrp_B 3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
T18289(T18289) racGAP protein - slime mold (Dictyostelium discoi... 85 8e-15 (Q1ZXH8) RecName: Full=Guanine exchange factor for Rac 30; 84 2e-14 (Q55E26) RecName: Full=Rac guanine nucleotide exchange factor B;... 80 2e-13 AF326352_1(AF326352|pid:none) Caenorhabditis elegans putative Rh... 79 4e-13 AB060647_1(AB060647|pid:none) Caenorhabditis elegans exc-5 mRNA ... 79 4e-13 T19678(T19678)hypothetical protein C33D9.1 - Caenorhabditis eleg... 79 4e-13 BX005416_1(BX005416|pid:none) Zebrafish DNA sequence from clone ... 75 8e-12 AF064244_1(AF064244|pid:none) Homo sapiens intersectin long form... 74 2e-11 BX005458_2(BX005458|pid:none) Zebrafish DNA sequence from clone ... 72 5e-11 BC156473_1(BC156473|pid:none) Synthetic construct Mus musculus c... 72 7e-11 AK082606_1(AK082606|pid:none) Mus musculus 0 day neonate cerebel... 72 7e-11 (Q9Z0R4) RecName: Full=Intersectin-1; AltName: Full=EH and SH3 d... 72 7e-11 EU120733_1(EU120733|pid:none) Homo sapiens intersectin 1 long fo... 72 7e-11 (Q15811) RecName: Full=Intersectin-1; AltName: Full=SH3 domain-c... 72 7e-11 (Q9TW28) RecName: Full=Myosin-M heavy chain; AltName: Full=RhoGE... 70 2e-10 AY281052_1(AY281052|pid:none) Entamoeba histolytica guanine nucl... 67 2e-09 BC161645_1(BC161645|pid:none) Xenopus tropicalis hypothetical pr... 67 2e-09 (Q5JSP0) RecName: Full=FYVE, RhoGEF and PH domain-containing pro... 67 2e-09 AY211386_1(AY211386|pid:none) Homo sapiens FGD3 mRNA, complete c... 67 2e-09 AK000004_1(AK000004|pid:none) Homo sapiens mRNA for FLJ00004 pro... 67 3e-09 BC032429_1(BC032429|pid:none) Homo sapiens FYVE, RhoGEF and PH d... 67 3e-09 BT021872_1(BT021872|pid:none) Bos taurus FGD1 family, member 3 (... 66 4e-09 BC105139_1(BC105139|pid:none) Bos taurus FYVE, RhoGEF and PH dom... 66 4e-09 BC057726_1(BC057726|pid:none) Xenopus laevis Vav2 oncogene, mRNA... 66 5e-09 AK122480_1(AK122480|pid:none) Mus musculus premature mRNA for mK... 66 5e-09 (Q9Z0R6) RecName: Full=Intersectin-2; AltName: Full=SH3 domain-c... 66 5e-09 BC138262_1(BC138262|pid:none) Mus musculus intersectin 2, mRNA (... 66 5e-09 (Q5R5T1) RecName: Full=FYVE, RhoGEF and PH domain-containing pro... 65 6e-09 AC116957_107(AC116957|pid:none) Dictyostelium discoideum chromos... 65 6e-09 AB384587_1(AB384587|pid:none) Synthetic construct DNA, clone: pF... 65 8e-09 AF248540_1(AF248540|pid:none) Homo sapiens intersectin 2 (SH3D1B... 65 8e-09 BC146779_1(BC146779|pid:none) Homo sapiens intersectin 2, mRNA (... 65 8e-09 BC080596_1(BC080596|pid:none) Homo sapiens Rho guanine nucleotid... 65 8e-09 AK300174_1(AK300174|pid:none) Homo sapiens cDNA FLJ53189 complet... 65 8e-09 (Q9NZM3) RecName: Full=Intersectin-2; AltName: Full=SH3 domain-c... 65 8e-09 BC117171_1(BC117171|pid:none) Homo sapiens Rho guanine nucleotid... 65 8e-09 AB046846_1(AB046846|pid:none) Homo sapiens mRNA for KIAA1626 pro... 65 8e-09 AB033082_1(AB033082|pid:none) Homo sapiens mRNA for KIAA1256 pro... 65 8e-09 (Q9NVT3) RecName: Full=Rho guanine nucleotide exchange factor 10... 65 8e-09 DQ139833_1(DQ139833|pid:none) Homo sapiens Rho-specific guanine ... 65 8e-09 (Q29RM4) RecName: Full=Rho guanine nucleotide exchange factor 10... 65 8e-09 BC059220_1(BC059220|pid:none) Mus musculus Rho guanine nucleotid... 65 1e-08 AK051395_1(AK051395|pid:none) Mus musculus 12 days embryo spinal... 65 1e-08 AK157835_1(AK157835|pid:none) Mus musculus erythroblast cDNA, RI... 65 1e-08 (Q5R5M3) RecName: Full=Rho guanine nucleotide exchange factor 10... 65 1e-08 AK129408_1(AK129408|pid:none) Mus musculus mRNA for mKIAA1626 pr... 65 1e-08 (Q8VDH5) RecName: Full=Rho guanine nucleotide exchange factor 10... 65 1e-08 AL929073_6(AL929073|pid:none) Mouse DNA sequence from clone RP23... 65 1e-08 AK028648_1(AK028648|pid:none) Mus musculus 10 days neonate skin ... 64 1e-08 BC155458_1(BC155458|pid:none) Xenopus tropicalis hypothetical pr... 64 1e-08 AK126877_1(AK126877|pid:none) Homo sapiens cDNA FLJ44929 fis, cl... 64 1e-08 AY487422_1(AY487422|pid:none) Xenopus laevis epithelial cell tra... 64 2e-08 AC008073_6(AC008073|pid:none) Homo sapiens BAC clone RP11-507M3 ... 64 2e-08 BC151970_1(BC151970|pid:none) Danio rerio similar to Intersectin... 64 2e-08 BC068913_1(BC068913|pid:none) Xenopus laevis hypothetical protei... 64 2e-08 BC084325_1(BC084325|pid:none) Xenopus laevis epithelial cell tra... 62 5e-08 BC065561_1(BC065561|pid:none) Homo sapiens Rho guanine nucleotid... 62 5e-08 AC114265_7(AC114265|pid:none) Dictyostelium discoideum chromosom... 62 5e-08 (Q21653) RecName: Full=Uncharacterized protein R02F2.2; &U00055... 62 5e-08 AB002335_1(AB002335|pid:none) Homo sapiens mRNA for KIAA0337 gen... 62 7e-08 AM393506_1(AM393506|pid:none) Synthetic construct Mus musculus c... 62 7e-08 (Q96PE2) RecName: Full=Rho guanine nucleotide exchange factor 17... 62 7e-08 EF043892_1(EF043892|pid:none) Synthetic construct clone ATCC 106... 62 7e-08 (Q60992) RecName: Full=Guanine nucleotide exchange factor VAV2; ... 62 7e-08 (Q80U35) RecName: Full=Rho guanine nucleotide exchange factor 17; 62 9e-08 AK131110_1(AK131110|pid:none) Mus musculus mRNA for mFLJ00018 pr... 62 9e-08 BC052436_1(BC052436|pid:none) Mus musculus pleckstrin homology d... 62 9e-08 BC056971_1(BC056971|pid:none) Mus musculus pleckstrin homology d... 62 9e-08 AL357934_1(AL357934|pid:none) Human DNA sequence from clone RP11... 62 9e-08 AE014296_1415(AE014296|pid:none) Drosophila melanogaster chromos... 62 9e-08 AE014296_1416(AE014296|pid:none) Drosophila melanogaster chromos... 62 9e-08 AK122250_1(AK122250|pid:none) Mus musculus mRNA for mKIAA0337 pr... 62 9e-08 BC169013_1(BC169013|pid:none) Rattus norvegicus pleckstrin homol... 62 9e-08 I51940(I51940) gene VAV2 protein - human &S76992_1(S76992|pid:n... 62 9e-08 AK144152_1(AK144152|pid:none) Mus musculus cDNA, RIKEN full-leng... 62 9e-08 AE014296_1414(AE014296|pid:none) Drosophila melanogaster chromos... 62 9e-08 (Q6KAU7) RecName: Full=Pleckstrin homology domain-containing fam... 62 9e-08 AE014296_1412(AE014296|pid:none) Drosophila melanogaster chromos... 62 9e-08 BT021933_1(BT021933|pid:none) Drosophila melanogaster SD01796 fu... 62 9e-08 CR857576_1(CR857576|pid:none) Pongo abelii mRNA; cDNA DKFZp469K0... 61 1e-07 BC114732_1(BC114732|pid:none) Bos taurus FYVE, RhoGEF and PH dom... 61 2e-07 AK149626_1(AK149626|pid:none) Mus musculus bone marrow macrophag... 60 2e-07 (Q91ZT5) RecName: Full=FYVE, RhoGEF and PH domain-containing pro... 60 2e-07 AF402613_1(AF402613|pid:none) Mus musculus actin-binding protein... 60 2e-07 BC136098_1(BC136098|pid:none) Xenopus tropicalis hypothetical pr... 60 3e-07 AK044341_1(AK044341|pid:none) Mus musculus adult retina cDNA, RI... 60 3e-07 AK173157_1(AK173157|pid:none) Mus musculus mRNA for mKIAA1362 pr... 60 3e-07 AK124904_1(AK124904|pid:none) Homo sapiens cDNA FLJ42914 fis, cl... 60 3e-07 AX405929_1(AX405929|pid:none) Sequence 344 from Patent WO0222660. 60 3e-07 AK128492_1(AK128492|pid:none) Homo sapiens cDNA FLJ46642 fis, cl... 60 3e-07 AK038840_1(AK038840|pid:none) Mus musculus adult male hypothalam... 59 5e-07 BX470092_8(BX470092|pid:none) Mouse DNA sequence from clone RP23... 59 5e-07 (Q3UTH8) RecName: Full=Rho guanine nucleotide exchange factor 9;... 59 5e-07 AK295033_1(AK295033|pid:none) Homo sapiens cDNA FLJ50765 complet... 59 5e-07 BC102858_1(BC102858|pid:none) Bos taurus neuroepithelial cell tr... 59 5e-07 AK122280_1(AK122280|pid:none) Mus musculus mRNA for mKIAA0424 pr... 59 5e-07 AK295178_1(AK295178|pid:none) Homo sapiens cDNA FLJ59516 complet... 59 5e-07 AL807821_4(AL807821|pid:none) Mouse DNA sequence from clone RP23... 59 5e-07 AK289993_1(AK289993|pid:none) Homo sapiens cDNA FLJ76229 complet... 59 5e-07 AL355142_2(AL355142|pid:none) Human DNA sequence from clone RP11... 59 5e-07 (Q58DL7) RecName: Full=Rho guanine nucleotide exchange factor 9;... 59 5e-07 BX538322_1(BX538322|pid:none) Homo sapiens mRNA; cDNA DKFZp686G0... 59 5e-07 (Q5RDK0) RecName: Full=Rho guanine nucleotide exchange factor 9;... 59 5e-07 BC096846_1(BC096846|pid:none) Danio rerio epithelial cell transf... 59 6e-07 AJ302676_1(AJ302676|pid:none) Rattus norvegicus mRNA for collybi... 59 6e-07 (Q9QX73) RecName: Full=Rho guanine nucleotide exchange factor 9;... 59 6e-07 AK024429_1(AK024429|pid:none) Homo sapiens mRNA for FLJ00018 pro... 59 8e-07 BC075858_1(BC075858|pid:none) Homo sapiens pleckstrin homology d... 59 8e-07 AB220502_1(AB220502|pid:none) Macaca fascicularis mRNA, clone Qn... 59 8e-07 BC045552_1(BC045552|pid:none) Homo sapiens FYVE, RhoGEF and PH d... 59 8e-07 DQ847274_1(DQ847274|pid:none) Homo sapiens epithelial cell trans... 59 8e-07 AK023267_1(AK023267|pid:none) Homo sapiens cDNA FLJ13205 fis, cl... 59 8e-07 AK302476_1(AK302476|pid:none) Homo sapiens cDNA FLJ56270 complet... 59 8e-07 (Q9H7P9) RecName: Full=Pleckstrin homology domain-containing fam... 59 8e-07 AB002292_1(AB002292|pid:none) Human mRNA for KIAA0294 gene, part... 58 1e-06 (Q7Z628) RecName: Full=Neuroepithelial cell-transforming gene 1 ... 58 1e-06 AK016940_1(AK016940|pid:none) Mus musculus adult male testis cDN... 58 1e-06 BC042313_1(BC042313|pid:none) Xenopus laevis neuroepithelial cel... 58 1e-06 AB385304_1(AB385304|pid:none) Synthetic construct DNA, clone: pF... 58 1e-06 (Q54C71) RecName: Full=Kinase and exchange factor for Rac B; ... 58 1e-06 BC112926_1(BC112926|pid:none) Homo sapiens Rho guanine nucleotid... 58 1e-06 (O15013) RecName: Full=Rho guanine nucleotide exchange factor 10; 58 1e-06 AJ720414_1(AJ720414|pid:none) Gallus gallus mRNA for hypothetica... 58 1e-06 AB173388_1(AB173388|pid:none) Macaca fascicularis brain cDNA clo... 58 1e-06 (Q96M96) RecName: Full=FYVE, RhoGEF and PH domain-containing pro... 58 1e-06 BC072258_1(BC072258|pid:none) Xenopus laevis hypothetical protei... 58 1e-06 AK057294_1(AK057294|pid:none) Homo sapiens cDNA FLJ32732 fis, cl... 58 1e-06 G01210(G01210) guanine nucleotide regulatory protein - human &U... 58 1e-06 BC032155_1(BC032155|pid:none) Mus musculus ect2 oncogene, mRNA (... 58 1e-06 BC063738_1(BC063738|pid:none) Xenopus laevis hypothetical protei... 58 1e-06 BC023881_1(BC023881|pid:none) Mus musculus ect2 oncogene, mRNA (... 58 1e-06 AL392107_2(AL392107|pid:none) Human DNA sequence from clone RP11... 58 1e-06 AE017347_378(AE017347|pid:none) Cryptococcus neoformans var. neo... 57 2e-06 BC125701_1(BC125701|pid:none) Xenopus tropicalis neuroepithelial... 57 2e-06 (P98174) RecName: Full=FYVE, RhoGEF and PH domain-containing pro... 57 2e-06 AL805937_5(AL805937|pid:none) Mouse DNA sequence from clone RP23... 57 2e-06 AK134629_1(AK134629|pid:none) Mus musculus adult male medulla ob... 57 2e-06 AK027713_1(AK027713|pid:none) Homo sapiens cDNA FLJ14807 fis, cl... 57 2e-06 AL805937_6(AL805937|pid:none) Mouse DNA sequence from clone RP23... 57 2e-06 (Q9NR80) RecName: Full=Rho guanine nucleotide exchange factor 4;... 57 3e-06 AB384116_1(AB384116|pid:none) Synthetic construct DNA, clone: pF... 57 3e-06 AY367054_1(AY367054|pid:none) Homo sapiens actin-filament bindin... 57 3e-06 BC100154_1(BC100154|pid:none) Rattus norvegicus neuroepithelial ... 57 3e-06 (Q45FX5) RecName: Full=Protein vav-1; &DQ136172_1(DQ136172|pid:... 57 3e-06 T15778(T15778)hypothetical protein C35B8.2 - Caenorhabditis eleg... 57 3e-06 CS185607_1(CS185607|pid:none) Sequence 90 from Patent EP1591448. 57 3e-06 AB037783_1(AB037783|pid:none) Homo sapiens mRNA for KIAA1362 pro... 57 3e-06 AC009477_1(AC009477|pid:none) Homo sapiens BAC clone RP11-209H16... 57 3e-06 U23520_5(U23520|pid:none) Caenorhabditis elegans cosmid C35B8, c... 57 3e-06 AK127282_1(AK127282|pid:none) Homo sapiens cDNA FLJ45349 fis, cl... 56 5e-06 AK123040_1(AK123040|pid:none) Homo sapiens cDNA FLJ41045 fis, cl... 56 5e-06 BC059212_1(BC059212|pid:none) Mus musculus Rho guanine nucleotid... 56 5e-06 AK295166_1(AK295166|pid:none) Homo sapiens cDNA FLJ60542 complet... 56 5e-06 (Q8C033) RecName: Full=Rho guanine nucleotide exchange factor 10; 56 5e-06 BC143969_1(BC143969|pid:none) Homo sapiens vav 3 guanine nucleot... 56 5e-06 AK022884_1(AK022884|pid:none) Homo sapiens cDNA FLJ12822 fis, cl... 56 5e-06 AK294721_1(AK294721|pid:none) Homo sapiens cDNA FLJ50145 complet... 56 5e-06 AF118886_1(AF118886|pid:none) Homo sapiens VAV-3 protein beta is... 56 5e-06 AK220332_1(AK220332|pid:none) Mus musculus mRNA for mKIAA0294 pr... 56 5e-06 AK303334_1(AK303334|pid:none) Homo sapiens cDNA FLJ56188 complet... 55 7e-06 AK293288_1(AK293288|pid:none) Homo sapiens cDNA FLJ61588 partial... 55 7e-06 BX465862_4(BX465862|pid:none) Zebrafish DNA sequence from clone ... 55 7e-06 AB384583_1(AB384583|pid:none) Synthetic construct DNA, clone: pF... 55 7e-06 BX465862_5(BX465862|pid:none) Zebrafish DNA sequence from clone ... 55 7e-06 (Q9UKW4) RecName: Full=Guanine nucleotide exchange factor VAV3; ... 55 7e-06 BC085638_1(BC085638|pid:none) Danio rerio neuroepithelial cell t... 55 7e-06 AL513206_2(AL513206|pid:none) Human DNA sequence from clone RP11... 55 7e-06 BX323868_1(BX323868|pid:none) Zebrafish DNA sequence from clone ... 55 7e-06 AY383729_1(AY383729|pid:none) Mus musculus TUBA mRNA, complete c... 55 9e-06 BC156338_1(BC156338|pid:none) Synthetic construct Mus musculus c... 55 9e-06 (Q6TXD4) RecName: Full=Dynamin-binding protein; AltName: Full=Sc... 55 9e-06 AE014298_2694(AE014298|pid:none) Drosophila melanogaster chromos... 55 1e-05 AK129261_1(AK129261|pid:none) Mus musculus mRNA for mKIAA1010 pr... 55 1e-05 (Q5RDX5) RecName: Full=Ephexin-1; AltName: Full=Eph-interacting ... 54 1e-05 AJ238899_1(AJ238899|pid:none) Homo sapiens mRNA for guanine nucl... 54 1e-05 AK032452_1(AK032452|pid:none) Mus musculus adult male olfactory ... 54 1e-05 AK297390_1(AK297390|pid:none) Homo sapiens cDNA FLJ53898 complet... 54 1e-05 AK300953_1(AK300953|pid:none) Homo sapiens cDNA FLJ55312 complet... 54 1e-05 BC031573_1(BC031573|pid:none) Homo sapiens neuronal guanine nucl... 54 1e-05 (Q8N5V2) RecName: Full=Ephexin-1; AltName: Full=Eph-interacting ... 54 1e-05 AK293203_1(AK293203|pid:none) Homo sapiens cDNA FLJ59455 complet... 54 1e-05 BT059082_1(BT059082|pid:none) Salmo salar clone ssal-rgf-524-113... 54 1e-05 (Q8CHT1) RecName: Full=Ephexin-1; AltName: Full=Eph-interacting ... 54 2e-05 AB174533_1(AB174533|pid:none) Macaca fascicularis brain cDNA clo... 54 2e-05 BC040474_1(BC040474|pid:none) Homo sapiens Rho guanine nucleotid... 54 2e-05 DQ424905_1(DQ424905|pid:none) Homo sapiens clone FG060308 rho gu... 54 2e-05 AE014297_2492(AE014297|pid:none) Drosophila melanogaster chromos... 54 2e-05 AJ010045_1(AJ010045|pid:none) Mus musculus mRNA for Rho guanine ... 54 2e-05 BC076628_1(BC076628|pid:none) Mus musculus pleckstrin homology d... 54 2e-05 AK122468_1(AK122468|pid:none) Mus musculus mRNA for mKIAA1209 pr... 54 2e-05 BX469892_1(BX469892|pid:none) Zebrafish DNA sequence from clone ... 54 2e-05 CR382128_804(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 54 2e-05 AK135923_1(AK135923|pid:none) Mus musculus in vitro fertilized e... 54 2e-05 AY038025_1(AY038025|pid:none) Mus musculus ephexin mRNA, complet... 54 2e-05 BC096859_1(BC096859|pid:none) Danio rerio faciogenital dysplasia... 54 2e-05 AF017370_1(AF017370|pid:none) Danio rerio faciogenital dysplasia... 54 2e-05 BC117965_1(BC117965|pid:none) Mus musculus pleckstrin homology d... 54 2e-05 (Q9Z206) RecName: Full=Neuroepithelial cell-transforming gene 1 ... 54 2e-05 AL953867_1(AL953867|pid:none) Zebrafish DNA sequence from clone ... 53 3e-05 AF094520_1(AF094520|pid:none) Mus musculus NET1 homolog (Net1) m... 53 3e-05 AK056300_1(AK056300|pid:none) Homo sapiens cDNA FLJ31738 fis, cl... 53 3e-05 FM992692_184(FM992692|pid:none) Candida dubliniensis CD36 chromo... 53 3e-05 BC156402_1(BC156402|pid:none) Synthetic construct Homo sapiens c... 53 4e-05 AK041249_1(AK041249|pid:none) Mus musculus adult male aorta and ... 53 4e-05 EF043893_1(EF043893|pid:none) Synthetic construct clone ATCC 106... 53 4e-05 BX248779_1(BX248779|pid:none) human full-length cDNA 5-PRIME end... 53 4e-05 AB037836_1(AB037836|pid:none) Homo sapiens mRNA for KIAA1415 pro... 53 4e-05 BC157940_1(BC157940|pid:none) Mus musculus phosphatidylinositol-... 53 4e-05 (Q69ZK0) RecName: Full=Phosphatidylinositol 3,4,5-trisphosphate-... 53 4e-05 (Q96EW6) RecName: Full=Pleckstrin homology domain-containing fam... 53 4e-05 AJ320261_1(AJ320261|pid:none) Homo sapiens mRNA for P-Rex1 prote... 53 4e-05 AK293864_1(AK293864|pid:none) Homo sapiens cDNA FLJ58753 complet... 52 6e-05 AK300045_1(AK300045|pid:none) Homo sapiens cDNA FLJ55591 complet... 52 6e-05 BC123858_1(BC123858|pid:none) Bos taurus neuronal guanine nucleo... 52 6e-05 AK291412_1(AK291412|pid:none) Homo sapiens cDNA FLJ76301 complet... 52 6e-05 BC099715_1(BC099715|pid:none) Homo sapiens Rho guanine nucleotid... 52 6e-05 BC068513_1(BC068513|pid:none) Homo sapiens Rho guanine nucleotid... 52 6e-05 AK026111_1(AK026111|pid:none) Homo sapiens cDNA: FLJ22458 fis, c... 52 6e-05 AK024340_1(AK024340|pid:none) Homo sapiens cDNA FLJ14278 fis, cl... 52 6e-05 (Q9H7T4) RecName: Full=Rho guanine nucleotide exchange factor 3;... 52 7e-05 (A1IGU4) RecName: Full=Probable guanine nucleotide exchange fact... 52 7e-05 AK029872_1(AK029872|pid:none) Mus musculus adult male testis cDN... 52 7e-05 BC004009_1(BC004009|pid:none) Mus musculus FERM, RhoGEF (Arhgef)... 52 7e-05 (Q9N0A8) RecName: Full=Rho guanine nucleotide exchange factor 3;... 52 7e-05 BC005517_1(BC005517|pid:none) Mus musculus Rho guanine nucleotid... 52 7e-05 (Q91X46) RecName: Full=Rho guanine nucleotide exchange factor 3;... 52 7e-05 BC091122_1(BC091122|pid:none) Rattus norvegicus neuronal guanine... 52 7e-05 AX027844_1(AX027844|pid:none) Sequence 1 from Patent WO0040718. 52 9e-05 AB384834_1(AB384834|pid:none) Synthetic construct DNA, clone: pF... 52 9e-05 (Q9Y4F1) RecName: Full=FERM, RhoGEF and pleckstrin domain-contai... 52 9e-05 AK034403_1(AK034403|pid:none) Mus musculus adult male diencephal... 52 9e-05 BC030329_1(BC030329|pid:none) Mus musculus FERM, RhoGEF (Arhgef)... 52 9e-05 (Q5R6F2) RecName: Full=Rho guanine nucleotide exchange factor 3;... 52 9e-05 AX046921_1(AX046921|pid:none) Sequence 5 from Patent WO0068420. 52 9e-05 AB385176_1(AB385176|pid:none) Synthetic construct DNA, clone: pF... 52 9e-05 CR788310_3(CR788310|pid:none) Zebrafish DNA sequence from clone ... 52 9e-05 AB001770_1(AB001770|pid:none) Ciona savignyi pem-2 (posterior en... 51 1e-04 AB385192_1(AB385192|pid:none) Synthetic construct DNA, clone: pF... 51 2e-04 AK290135_1(AK290135|pid:none) Homo sapiens cDNA FLJ77032 partial... 51 2e-04 B47485(B47485)ABR protein 2 - human 51 2e-04 (A1IGU3) RecName: Full=Probable guanine nucleotide exchange fact... 51 2e-04 BC040275_1(BC040275|pid:none) Homo sapiens Ras protein-specific ... 51 2e-04 AK302682_1(AK302682|pid:none) Homo sapiens cDNA FLJ60982 complet... 51 2e-04 BC134844_1(BC134844|pid:none) Danio rerio zgc:161981, mRNA (cDNA... 51 2e-04 (Q12979) RecName: Full=Active breakpoint cluster region-related ... 51 2e-04 AB384846_1(AB384846|pid:none) Synthetic construct DNA, clone: pF... 51 2e-04 T16657(T16657)hypothetical protein R02F2.3 - Caenorhabditis eleg... 51 2e-04 DQ640641_1(DQ640641|pid:none) Xenopus laevis Rho guanine nucleot... 50 2e-04 (A6QNS3) RecName: Full=Active breakpoint cluster region-related ... 50 2e-04 AL591143_2(AL591143|pid:none) Mouse DNA sequence from clone RP23... 50 4e-04 (A2CEA7) RecName: Full=Ras-specific guanine nucleotide-releasing... 50 4e-04 (Q11100) RecName: Full=Putative protein tag-52; &T34079(T34079)... 50 4e-04 FN392319_1324(FN392319|pid:none) Pichia pastoris GS115 chromosom... 49 6e-04 AL732437_5(AL732437|pid:none) Human DNA sequence from clone RP11... 49 6e-04 AL845168_4(AL845168|pid:none) Zebrafish DNA sequence from clone ... 49 6e-04 AL844512_2(AL844512|pid:none) Zebrafish DNA sequence from clone ... 49 8e-04 AK002045_1(AK002045|pid:none) Homo sapiens cDNA FLJ11183 fis, cl... 49 8e-04 AL591884_1(AL591884|pid:none) Mouse DNA sequence from clone RP23... 49 8e-04 BC154459_1(BC154459|pid:none) Danio rerio similar to active brea... 49 8e-04 (A1IGU5) RecName: Full=Probable guanine nucleotide exchange fact... 48 0.001 AK300559_1(AK300559|pid:none) Homo sapiens cDNA FLJ50067 complet... 48 0.001 AK300355_1(AK300355|pid:none) Homo sapiens cDNA FLJ54440 complet... 48 0.001 AK220313_1(AK220313|pid:none) Mus musculus mRNA for mFLJ00298 pr... 48 0.001 AB199796_1(AB199796|pid:none) Homo sapiens mRNA for hypothetical... 48 0.001 AF077534_2(AF077534|pid:none) Caenorhabditis elegans cosmid K07D... 48 0.001 (P70392) RecName: Full=Ras-specific guanine nucleotide-releasing... 48 0.001 BX572633_1(BX572633|pid:none) Zebrafish DNA sequence from clone ... 48 0.001 CR854977_3(CR854977|pid:none) Zebrafish DNA sequence from clone ... 48 0.001 AK158193_1(AK158193|pid:none) Mus musculus adult inner ear cDNA,... 48 0.001 CR858031_1(CR858031|pid:none) Pongo abelii mRNA; cDNA DKFZp459J1... 48 0.001 BC091160_1(BC091160|pid:none) Rattus norvegicus vav 1 guanine nu... 48 0.001 AF023130_1(AF023130|pid:none) Homo sapiens Ras-GRF2 mRNA, partia... 48 0.001 AF077534_1(AF077534|pid:none) Caenorhabditis elegans cosmid K07D... 48 0.001 FM992689_298(FM992689|pid:none) Candida dubliniensis CD36 chromo... 48 0.001 BC160596_1(BC160596|pid:none) Xenopus tropicalis hypothetical pr... 48 0.001 AK045140_1(AK045140|pid:none) Mus musculus 9.5 days embryo parth... 48 0.001 (O14827) RecName: Full=Ras-specific guanine nucleotide-releasing... 48 0.001 AY508996_1(AY508996|pid:none) Homo sapiens P-Rex2 mRNA, complete... 47 0.002 AK138884_1(AK138884|pid:none) Mus musculus 0 day neonate thymus ... 47 0.002 BC016628_1(BC016628|pid:none) Homo sapiens Src homology 3 domain... 47 0.002 (Q99JE4) RecName: Full=Ras-specific guanine nucleotide-releasing... 47 0.002 AK142414_1(AK142414|pid:none) Mus musculus 13 days embryo lung c... 47 0.002 (Q3LAC4) RecName: Full=Phosphatidylinositol 3,4,5-trisphosphate-... 47 0.002 AY508997_1(AY508997|pid:none) Homo sapiens P-Rex2B mRNA, complet... 47 0.002 BC020487_1(BC020487|pid:none) Mus musculus vav 1 oncogene, mRNA ... 47 0.002 AK088586_1(AK088586|pid:none) Mus musculus 2 days neonate thymus... 47 0.002 AK154183_1(AK154183|pid:none) Mus musculus NOD-derived CD11c +ve... 47 0.002 BC060376_1(BC060376|pid:none) Mus musculus Rho guanine nucleotid... 47 0.002 (Q8IW93) RecName: Full=Rho guanine nucleotide exchange factor 19... 47 0.003 (Q8BWA8) RecName: Full=Rho guanine nucleotide exchange factor 19... 47 0.003 (Q96N96) RecName: Full=Spermatogenesis-associated protein 13; &... 47 0.003 AK123031_1(AK123031|pid:none) Homo sapiens cDNA FLJ41035 fis, cl... 47 0.003 AK313307_1(AK313307|pid:none) Homo sapiens cDNA, FLJ93820, highl... 47 0.003 AX366204_1(AX366204|pid:none) Sequence 1 from Patent WO0206325. ... 47 0.003 CR382137_495(CR382137|pid:none) Debaryomyces hansenii strain CBS... 47 0.003 (Q9UTR5) RecName: Full=Rho1 guanine nucleotide exchange factor 2... 47 0.003 AK297394_1(AK297394|pid:none) Homo sapiens cDNA FLJ59347 complet... 47 0.003 AK301149_1(AK301149|pid:none) Homo sapiens cDNA FLJ59443 complet... 47 0.003 AB385261_1(AB385261|pid:none) Synthetic construct DNA, clone: pF... 47 0.003 BC146369_1(BC146369|pid:none) Synthetic construct Homo sapiens c... 47 0.003 AJ308233_4(AJ308233|pid:none) Tetraodon nigroviridis aw502783-li... 47 0.003 AK298717_1(AK298717|pid:none) Homo sapiens cDNA FLJ59735 complet... 47 0.003 AK160371_1(AK160371|pid:none) Homo sapiens mRNA for FLJ00298 pro... 47 0.003 (Q08DN7) RecName: Full=Proto-oncogene vav; &BC123646_1(BC123646... 47 0.003 AX181650_1(AX181650|pid:none) Sequence 7 from Patent WO0146231. 47 0.003 BC013361_1(BC013361|pid:none) Homo sapiens vav 1 guanine nucleot... 46 0.004 AK151367_1(AK151367|pid:none) Mus musculus bone marrow macrophag... 46 0.004 (P15498) RecName: Full=Proto-oncogene vav; &AF030227_1(AF030227... 46 0.004 AK301128_1(AK301128|pid:none) Homo sapiens cDNA FLJ53479 complet... 46 0.004 AK151373_1(AK151373|pid:none) Mus musculus bone marrow macrophag... 46 0.004 BT029984_1(BT029984|pid:none) Drosophila melanogaster LP16193 fu... 46 0.005 AE014298_2952(AE014298|pid:none) Drosophila melanogaster chromos... 46 0.005 (Q6PAJ1) RecName: Full=Breakpoint cluster region protein; ... 45 0.007 AK129482_1(AK129482|pid:none) Mus musculus mRNA for mKIAA3017 pr... 45 0.007 AK054242_1(AK054242|pid:none) Mus musculus 2 days pregnant adult... 45 0.007 BC154874_1(BC154874|pid:none) Xenopus tropicalis hypothetical pr... 45 0.007 CR450767_1(CR450767|pid:none) Zebrafish DNA sequence from clone ... 45 0.009 AE017349_428(AE017349|pid:none) Cryptococcus neoformans var. neo... 45 0.009 AM393217_1(AM393217|pid:none) Synthetic construct Homo sapiens c... 45 0.009 BC095043_1(BC095043|pid:none) Danio rerio zgc:109904, mRNA (cDNA... 45 0.009 AK294299_1(AK294299|pid:none) Homo sapiens cDNA FLJ56428 complet... 45 0.012 BC121371_1(BC121371|pid:none) Xenopus tropicalis Active breakpoi... 45 0.012 FN357312_14(FN357312|pid:none) Schistosoma mansoni genome sequen... 45 0.012 BC025127_1(BC025127|pid:none) Mus musculus Rho guanine nucleotid... 44 0.015 BC080423_1(BC080423|pid:none) Xenopus laevis MGC86436 protein, m... 44 0.015 FN357450_13(FN357450|pid:none) Schistosoma mansoni genome sequen... 44 0.015 AB169296_1(AB169296|pid:none) Macaca fascicularis testis cDNA, c... 44 0.015 BC098078_1(BC098078|pid:none) Xenopus tropicalis hypothetical pr... 44 0.020 AK054038_1(AK054038|pid:none) Mus musculus 2 days pregnant adult... 44 0.020 AY561277_1(AY561277|pid:none) Entamoeba dispar guanine nucleotid... 44 0.020 AY811785_1(AY811785|pid:none) Schistosoma japonicum SJCHGC03397 ... 44 0.020 AM920436_873(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 44 0.020 Y00661_1(Y00661|pid:none) Human bcr mRNA (break point cluster ge... 44 0.026 AE014296_1293(AE014296|pid:none) Drosophila melanogaster chromos... 44 0.026 BC169208_1(BC169208|pid:none) Synthetic construct Homo sapiens c... 44 0.026 FN313933_1(FN313933|pid:none) Schistosoma japonicum isolate Anhu... 44 0.026 A91848_1(A91848|pid:none) Sequence 7 from Patent WO9823743. 44 0.026 AK299909_1(AK299909|pid:none) Homo sapiens cDNA FLJ54747 complet... 43 0.034 CR382139_240(CR382139|pid:none) Debaryomyces hansenii strain CBS... 43 0.034 BC116024_1(BC116024|pid:none) Bos taurus Rho guanine nucleotide ... 43 0.044 AC004534_1(AC004534|pid:none) Homo sapiens PAC clone RP4-545C24 ... 42 0.058 BC023645_1(BC023645|pid:none) Homo sapiens FYVE, RhoGEF and PH d... 42 0.058 AK160365_1(AK160365|pid:none) Homo sapiens mRNA for FLJ00261 pro... 42 0.058 BC136661_1(BC136661|pid:none) Homo sapiens Rho guanine nucleotid... 42 0.058 AL844518_7(AL844518|pid:none) Zebrafish DNA sequence from clone ... 42 0.058 AL160264_1(AL160264|pid:none) Human DNA sequence from clone RP3-... 42 0.058 AL591143_4(AL591143|pid:none) Mouse DNA sequence from clone RP23... 42 0.075 AK122259_1(AK122259|pid:none) Mus musculus mRNA for mKIAA0362 pr... 42 0.075 BC073546_1(BC073546|pid:none) Xenopus laevis MGC82822 protein, m... 42 0.075 AK134993_1(AK134993|pid:none) Mus musculus adult male olfactory ... 42 0.075 S51620(S51620) Ost oncogene - rat &Z35654_1(Z35654|pid:none) 42 0.075 (Q63406) RecName: Full=Guanine nucleotide exchange factor DBS; A... 42 0.075 (Q64096) RecName: Full=Guanine nucleotide exchange factor DBS; A... 42 0.075 AK302500_1(AK302500|pid:none) Homo sapiens cDNA FLJ50916 complet... 42 0.098 (O15085) RecName: Full=Rho guanine nucleotide exchange factor 11... 42 0.098 BC079565_1(BC079565|pid:none) Mus musculus Rho guanine nucleotid... 42 0.098 AB002378_1(AB002378|pid:none) Homo sapiens ARHGEF11/KIAA0380 mRN... 42 0.098 AL157713_1(AL157713|pid:none) Human DNA sequence from clone RP11... 42 0.098 CP000496_186(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 41 0.13 AK295047_1(AK295047|pid:none) Homo sapiens cDNA FLJ61256 complet... 41 0.17 AB116074_1(AB116074|pid:none) Homo sapiens KIAA0362 mRNA for Ost... 41 0.17 (Q765G8) RecName: Full=Guanine nucleotide exchange factor DBS; A... 41 0.17 (Q3U5C8) RecName: Full=Rho guanine nucleotide exchange factor 16; 41 0.17 AB383861_1(AB383861|pid:none) Synthetic construct DNA, clone: pF... 41 0.17 AK295670_1(AK295670|pid:none) Homo sapiens cDNA FLJ59537 complet... 41 0.17 AL137002_5(AL137002|pid:none) Human DNA sequence from clone RP11... 41 0.17 AB116075_1(AB116075|pid:none) Homo sapiens KIAA0362 mRNA for Ost... 41 0.17 AK315969_1(AK315969|pid:none) Homo sapiens cDNA, FLJ78868 partia... 41 0.17 AL137002_1(AL137002|pid:none) Human DNA sequence from clone RP11... 41 0.17 AB002360_1(AB002360|pid:none) Human mRNA for KIAA0362 gene, part... 41 0.17 DQ895233_1(DQ895233|pid:none) Synthetic construct Homo sapiens c... 41 0.17 AK153708_1(AK153708|pid:none) Mus musculus 3 days neonate thymus... 41 0.17 CU928168_43(CU928168|pid:none) Kluyveromyces thermotolerans stra... 40 0.22 (Q9ES67) RecName: Full=Rho guanine nucleotide exchange factor 11... 40 0.22 AK030242_1(AK030242|pid:none) Mus musculus adult male testis cDN... 40 0.22 AK157225_1(AK157225|pid:none) Mus musculus activated spleen cDNA... 40 0.29 DQ344523_1(DQ344523|pid:none) Mus musculus strain B10.D2 FGD2 (F... 40 0.29 AK156151_1(AK156151|pid:none) Mus musculus activated spleen cDNA... 40 0.29 AF017368_1(AF017368|pid:none) Mus musculus faciogenital dysplasi... 40 0.29 BC027077_1(BC027077|pid:none) Mus musculus FERM, RhoGEF (Arhgef)... 40 0.29 AY301264_1(AY301264|pid:none) Mus musculus strain C57BL/6J chrom... 40 0.29 AE013599_2885(AE013599|pid:none) Drosophila melanogaster chromos... 40 0.37 FN357918_10(FN357918|pid:none) Schistosoma mansoni genome sequen... 40 0.37 AE017344_369(AE017344|pid:none) Cryptococcus neoformans var. neo... 40 0.37 CP000501_264(CP000501|pid:none) Pichia stipitis CBS 6054 chromos... 40 0.37 (P40995) RecName: Full=Rho guanine nucleotide exchange factor sc... 40 0.37 CR749203_1(CR749203|pid:none) Homo sapiens mRNA; cDNA DKFZp686N1... 39 0.49 FN357341_2(FN357341|pid:none) Schistosoma mansoni genome sequenc... 39 0.64 AK220153_1(AK220153|pid:none) Mus musculus mRNA for mFLJ00274 pr... 39 0.64 (Q80UZ0) RecName: Full=FYVE, RhoGEF and PH domain-containing pro... 39 0.64 AY570973_1(AY570973|pid:none) Homo sapiens PtdIns(3,4,5)-depende... 39 0.64 BC042732_1(BC042732|pid:none) Mus musculus FYVE, RhoGEF and PH d... 39 0.64 AY533677_1(AY533677|pid:none) Homo sapiens BCR mRNA, partial cds. 39 0.64 AL109627_10(AL109627|pid:none) Human DNA sequence from clone RP4... 38 1.1 BX294379_2(BX294379|pid:none) Zebrafish DNA sequence from clone ... 38 1.4 CU928176_206(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 37 1.9 AB097001_1(AB097001|pid:none) Homo sapiens mRNA for putative NFk... 37 2.4 CR382132_570(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 37 2.4 CR382127_345(CR382127|pid:none) Yarrowia lipolytica strain CLIB1... 37 2.4 BC149570_1(BC149570|pid:none) Bos taurus Rho guanine exchange fa... 37 3.2 AK095984_1(AK095984|pid:none) Homo sapiens cDNA FLJ38665 fis, cl... 37 3.2 AM920436_700(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 37 3.2 BT030674_1(BT030674|pid:none) Bos taurus Rho guanine exchange fa... 37 3.2 AL954710_7(AL954710|pid:none) Mouse DNA sequence from clone RP23... 37 3.2 BC159358_1(BC159358|pid:none) Xenopus tropicalis hypothetical pr... 36 5.4 (Q1ZXD6) RecName: Full=Probable serine/threonine-protein kinase ... 36 5.4 BC166429_1(BC166429|pid:none) Rattus norvegicus hypothetical pro... 36 5.4 BC086736_1(BC086736|pid:none) Danio rerio Rho guanine nucleotide... 35 7.0 BC066783_1(BC066783|pid:none) Xenopus tropicalis hypothetical pr... 35 7.0 DQ656109_1(DQ656109|pid:none) Danio rerio Rho guanine exchange f... 35 7.0 AK296488_1(AK296488|pid:none) Homo sapiens cDNA FLJ50789 complet... 35 9.2 AL033403_7(AL033403|pid:none) Human DNA sequence from clone RP6-... 35 9.2 AY889643_1(AY889643|pid:none) Synthetic construct Homo sapiens c... 35 9.2 (Q9Y7U6) RecName: Full=Rho1 guanine nucleotide exchange factor 1... 35 9.2 J03639_1(J03639|pid:none) Human DBL oncogene encoding a transfor... 35 9.2 AK294929_1(AK294929|pid:none) Homo sapiens cDNA FLJ51737 complet... 35 9.2 AK295709_1(AK295709|pid:none) Homo sapiens cDNA FLJ50776 complet... 35 9.2 AL117435_1(AL117435|pid:none) Homo sapiens mRNA; cDNA DKFZp434I2... 35 9.2 AL158217_10(AL158217|pid:none) Human DNA sequence from clone RP4... 35 9.2 (Q6ZNL6) RecName: Full=FYVE, RhoGEF and PH domain-containing pro... 35 9.2 AL033403_6(AL033403|pid:none) Human DNA sequence from clone RP6-... 35 9.2 AL158217_12(AL158217|pid:none) Human DNA sequence from clone RP4... 35 9.2 AL033403_2(AL033403|pid:none) Human DNA sequence from clone RP6-... 35 9.2 (Q58EX7) RecName: Full=Puratrophin-1; AltName: Full=Pleckstrin h... 35 9.2 BC043505_1(BC043505|pid:none) Homo sapiens Rac/Cdc42 guanine nuc... 35 9.2 AK301239_1(AK301239|pid:none) Homo sapiens cDNA FLJ59769 complet... 35 9.2 BC054486_1(BC054486|pid:none) Homo sapiens pleckstrin homology d... 35 9.2 AL117234_1(AL117234|pid:none) Novel human gene mapping to chomos... 35 9.2 AL158217_11(AL158217|pid:none) Human DNA sequence from clone RP4... 35 9.2 AL158217_9(AL158217|pid:none) Human DNA sequence from clone RP4-... 35 9.2 AL033403_3(AL033403|pid:none) Human DNA sequence from clone RP6-... 35 9.2 AB385194_1(AB385194|pid:none) Synthetic construct DNA, clone: pF... 35 9.2 (P10911) RecName: Full=Proto-oncogene DBL; AltName: Full=Proto-o... 35 9.2 (Q5VV41) RecName: Full=Rho guanine nucleotide exchange factor 16... 35 9.2 D25304_1(D25304|pid:none) Homo sapiens KIAA0006 mRNA, partial cds. 35 9.2 (Q15052) RecName: Full=Rho guanine nucleotide exchange factor 6;... 35 9.2 X12556_1(X12556|pid:none) Human mRNA for dbl proto-oncogene. 35 9.2 AL512413_2(AL512413|pid:none) Human DNA sequence from clone RP11... 35 9.2 AB085901_1(AB085901|pid:none) Homo sapiens DBL mRNA for DBL prot... 35 9.2
>T18289(T18289) racGAP protein - slime mold (Dictyostelium discoideum) &Y10159_1(Y10159|pid:none) Length = 1335
Score = 85.1 bits (209), Expect = 8e-15 Identities = 52/171 (30%), Positives = 92/171 (53%), Gaps = 3/171 (1%) Frame = +2
Query: 707 KLYELYINNYEKAFALTRYFKINPNYQDIQKSIYQKEKDIRCRHLDFGSFLVIPIQRLPR 886 KLY+ Y+NNY+K+ K Y + + + +L SFLV+PIQ LPR Sbjct: 881 KLYKHYVNNYDKSIRTLNQCK--EKYDGFKTYMASLDYSENLSNLSLESFLVLPIQPLPR 938
Query: 887 YIVLLKEMEKHTPTDNPDFNFIALSLVQLQDLTLYLNESKRKSSNSDKIDEIKQSV--FG 1060 Y++LL+++ K+T D+ DFN + +L ++DLT +N K + N+ KI ++++ + Sbjct: 939 YVMLLQDLLKYTANDHEDFNQLCEALSTIKDLTESINTKKSEEDNNTKILQVQEQIKDMP 998
Query: 1061 ATAIIGQSKYIMEGQLSLLKGVVASTKKD-LFIYLFKDCIICTEINSNYQK 1210 + + +++ EG L+L KKD +++LF D +I T+ +K Sbjct: 999 PNTMTLRKRFVTEGALTL--------KKDKYYVFLFTDRMILTKPGKEKKK 1041
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3236559 Number of Hits to DB: 1,679,121,849 Number of extensions: 28543371 Number of successful extensions: 60239 Number of sequences better than 10.0: 439 Number of HSP's gapped: 60078 Number of HSP's successfully gapped: 439 Length of query: 610 Length of database: 1,051,180,864 Length adjustment: 135 Effective length of query: 475 Effective length of database: 614,245,399 Effective search space: 291766564525 Effective search space used: 291766564525 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 32 (16.9 bits)
|
PSORT |
|
VS (DIR, S) |
0 |
VH (FL, L) |
1 |
VF (FL, S) |
0 |
AH (FL, L) |
0 |
AF (FL, S) |
0 |
SL (DIR, L) |
1 |
SS (DIR, S) |
0 |
SH (FL, L) |
0 |
SF (FL, S) |
0 |
CH (FL, L) |
0 |
CF (FL, S) |
0 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
0 |
FC-IC (SUB) |
0 |