Contig-U12500-1
Contig ID Contig-U12500-1
Contig update 2002.12.18
Contig sequence
>Contig-U12500-1 (Contig-U12500-1Q) /CSM_Contig/Contig-U12500-1Q.Seq.d
ATATTACTCGAACTTGGTTTTCAATATTTAATTATAAAATTTTTTATTTG
GAATTATAAAGTGTACTATAGAAAAGAAAGAGAGGATAGAGTGATATAAT
GAGTACAGATAAAAAACAAGAAACAATTGCCAATAGCAACAATAATAATA
ATAATACATCACCTTCAAATATTACTACTCCTACTCCAACAACAGCAACA
ACTGATAAAACAACATCAACACCAACAACAACATCAACATCAACACCAAC
AACAACATCAACACCAACACCAACACCAACACCAACACCAACACCAACAC
CAACACCAACACCAACACCAGCACCAACACCAACACCAACACAACAATCA
AATATTTCATCATCATCAAATTCAACAGAACAAAATAATAATAATAATAA
TAGTAATAATAATAATGATATAATTGAAAAAGATTTAACAAATAGAGAAA
TTGAAATTAAAAAGATAGTATCAAGTGCAGAATATACAGGACCACCAAAA
AAAACTATATATTTAGAGGATAATACAGATATATTTGATCCAAATGAACC
ACAGATAAAAGAGGATATAATTCGTATGATTATACAATATTTACAAGATG
AAGGATATACAGCATCATTATTGACAGTTCAAGATGAAGCC---------
-ATAGTATTAGTATTAATAGTGGTATTAATAATATTAATAATAATTTAAA
TAATTTAAATAATAATACCAATAATAATAATAAATCAAATGTAATTAATA
ATAATTGTTTATTAAGTTTAAAAGCACATGAAGGTGATGCATATACTGTT
CAATTTCATCCAGGTCAAAATCATATAGCAACTGGTGGTTATGATAAATC
AATTCATTTATATGATGTTAGAACTGGTCAATTGGTTAAATCATTCTCTG
GTCATACTGGATCCATTTCAAAGGTTATTTTCAATCCACATGGTAATTTA
ATCATTAGTGGTAGTAAAGATAGTACTATTAAATTTTGGGATATCGTTAG
TGGTGTTTGCATTAAAACATTATCTTCTCATTTGGGTGAAGTCACTTCAA
TCGCTACCAATAGCAGTGGTTCCTATCTATTAAGTGCTTCAAAAGATAAT
TCAAATCGTCTTTGGGATATAAGAAATGCTCGTCCAATTAAACGTTTCAA
AGGTCATCAAAATACTTCAAAAAATTTCATTAGAAGTTCATTTGGTCCAA
ATGAGTCTTTGGTGGTTGGTGGCTCTGAAGATGGTTATACTTACATTTGG
GATATTGAAACTTGTAATATCCTTCAAAAATTAGGTACCCCTTCAAATAA
TATGCCAATGGTTTATTCTGCAACTTGGTGTCAAGAACAATCATTATTAG
CAACTTGTTCTCAAGATTGTTCTGTAAAATTATGGTGGTATGATAAATCA
ATGCCAGTTTTTAATTCAAATTAAAATTACAAATAATAATAATTATTATT
ATTTAAATAAATNAATAAATAAATAAATAAAACAATAAATAATAAAAACA
AATTAAAATAAATATTTATACATCACTTT

Gap gap included
Contig length 1519
Chromosome number (1..6, M) -
Chromosome length -
Start point -
End point -
Strand (PLUS/MINUS) -
Number of clones 3
Number of EST 6
Link to clone list U12500
List of clone(s)

est1=VHI727F,1,632
est2=VHP575F,1,641
est3=VHP772F,6,633
est4=VHP772Z,642,1493
est5=VHI727Z,695,1498
est6=VHP575Z,877,1520
Translated Amino Acid sequence
itrtwfsifnykifylel*svl*krkrg*SDIMSTDKKQETIANSNNNNNNTSPSNITTP
TPTTATTDKTTSTPTTTSTSTPTTTSTPTPTPTPTPTPTPTPTPTPAPTPTPTQQSNISS
SSNSTEQNNNNNNSNNNNDIIEKDLTNREIEIKKIVSSAEYTGPPKKTIYLEDNTDIFDP
NEPQIKEDIIRMIIQYLQDEGYTASLLTVQDEA---

---SISINSGINNINNNLNNLNNNTNNNNKSNVINNNCLLSLKAHEGDAYTVQFHPGQNH
IATGGYDKSIHLYDVRTGQLVKSFSGHTGSISKVIFNPHGNLIISGSKDSTIKFWDIVSG
VCIKTLSSHLGEVTSIATNSSGSYLLSASKDNSNRLWDIRNARPIKRFKGHQNTSKNFIR
SSFGPNESLVVGGSEDGYTYIWDIETCNILQKLGTPSNNMPMVYSATWCQEQSLLATCSQ
DCSVKLWWYDKSMPVFNSN*nyk***lllfk*xnk*inktinnknklk*ifihhf


Translated Amino Acid sequence (All Frames)
Frame A:
illelgfqyliikffiwnykvyyrkeredrvi**vqiknkkqlpiatiiiiihhlqilll
llqqqqqlikqhqhqqqhqhqhqqqhqhqhqhqhqhqhqhqhqhqhqhqhqhqhnnqifh
hhqiqqnkiiiiiiviiimi*lkki*qieklklkr*yqvqniqdhqkklyi*riiqiyli
qmnhr*kri*fv*lyniykmkdiqhhy*qfkmk---

---ivlvlivvliiliii*ii*iiipiiiinqm*liiivy*v*khmkvmhilfnfiqvki
i*qlvvminqfiymmlelvnwlnhslvildpfqrlfsihmvi*slvvvkivllnfgislv
vfalkhylliwvkslqslpiavvpiy*vlqkiiqivfgi*emlvqlnvskvikilqkisl
evhlvqmslwwlvalkmviltfgilklvisfkn*vplqiicqwfilqlgvknnhy*qlvl
kivl*nyggminqcqfliqikitnnnnyyylnkxink*ikq*iiktn*nkylyit

Frame B:
yysnlvfni*l*nflfgiikctiekkerie*yneyr*ktrnncq*qq****yitfkyyys
ysnnsnn**nnintnnninintnnnintntntntntntntntntntstntntnttikyfi
iikfnrtk***********yn*krfnk*rn*n*kdsikcriyrttkknyifrg*yryi*s
k*ttdkrgynsydytiftr*riysiiidssr*s---

---*y*y**wy**y***fk*fk**yq****ikcn***lfikfkst*r*ciycsissrsks
ysnwwl**insfi*c*nwsig*iilwsywihfkgyfqstw*fnh*w**r*yy*ilgyr*w
clh*niifsfg*shfnryq*qwflsikcfkr*fksslgykkcssn*tfqrsskyfkkfh*
kfiwsk*vfggwwl*rwlylhlgy*nl*ypskirypfk*yanglfcnlvsrtiiisnlfs
rlfckimvv**inasf*fklklqiiiiiii*inx*ink*nnk**kqikiniytsl

Frame C:
itrtwfsifnykifylel*svl*krkrg*SDIMSTDKKQETIANSNNNNNNTSPSNITTP
TPTTATTDKTTSTPTTTSTSTPTTTSTPTPTPTPTPTPTPTPTPTPAPTPTPTQQSNISS
SSNSTEQNNNNNNSNNNNDIIEKDLTNREIEIKKIVSSAEYTGPPKKTIYLEDNTDIFDP
NEPQIKEDIIRMIIQYLQDEGYTASLLTVQDEA---

---SISINSGINNINNNLNNLNNNTNNNNKSNVINNNCLLSLKAHEGDAYTVQFHPGQNH
IATGGYDKSIHLYDVRTGQLVKSFSGHTGSISKVIFNPHGNLIISGSKDSTIKFWDIVSG
VCIKTLSSHLGEVTSIATNSSGSYLLSASKDNSNRLWDIRNARPIKRFKGHQNTSKNFIR
SSFGPNESLVVGGSEDGYTYIWDIETCNILQKLGTPSNNMPMVYSATWCQEQSLLATCSQ
DCSVKLWWYDKSMPVFNSN*nyk***lllfk*xnk*inktinnknklk*ifihhf

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U12500-1 (Contig-U12500-1Q)
/CSM_Contig/Contig-U12500-1Q.Seq.d
(1529 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U12500-1 (Contig-U12500-1Q) /CSM_Contig/Conti... 1298 0.0
Contig-U14477-1 (Contig-U14477-1Q) /CSM_Contig/Conti... 46 1e-04
Contig-U10184-1 (Contig-U10184-1Q) /CSM_Contig/Conti... 46 1e-04
Contig-U12341-1 (Contig-U12341-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U11842-1 (Contig-U11842-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U11241-1 (Contig-U11241-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U09286-1 (Contig-U09286-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U14698-1 (Contig-U14698-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U14511-1 (Contig-U14511-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U13930-1 (Contig-U13930-1Q) /CSM_Contig/Conti... 42 0.002

>Contig-U12500-1 (Contig-U12500-1Q) /CSM_Contig/Contig-U12500-1Q.Seq.d
Length = 1529

Score = 1298 bits (655), Expect = 0.0
Identities = 655/655 (100%)
Strand = Plus / Plus


Query: 756 tgtttattaagtttaaaagcacatgaaggtgatgcatatactgttcaatttcatccaggt 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 tgtttattaagtttaaaagcacatgaaggtgatgcatatactgttcaatttcatccaggt 815


Query: 816 caaaatcatatagcaactggtggttatgataaatcaattcatttatatgatgttagaact 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 caaaatcatatagcaactggtggttatgataaatcaattcatttatatgatgttagaact 875


Query: 876 ggtcaattggttaaatcattctctggtcatactggatccatttcaaaggttattttcaat 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 ggtcaattggttaaatcattctctggtcatactggatccatttcaaaggttattttcaat 935


Query: 936 ccacatggtaatttaatcattagtggtagtaaagatagtactattaaattttgggatatc 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 ccacatggtaatttaatcattagtggtagtaaagatagtactattaaattttgggatatc 995


Query: 996 gttagtggtgtttgcattaaaacattatcttctcatttgggtgaagtcacttcaatcgct 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 gttagtggtgtttgcattaaaacattatcttctcatttgggtgaagtcacttcaatcgct 1055


Query: 1056 accaatagcagtggttcctatctattaagtgcttcaaaagataattcaaatcgtctttgg 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1056 accaatagcagtggttcctatctattaagtgcttcaaaagataattcaaatcgtctttgg 1115


Query: 1116 gatataagaaatgctcgtccaattaaacgtttcaaaggtcatcaaaatacttcaaaaaat 1175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1116 gatataagaaatgctcgtccaattaaacgtttcaaaggtcatcaaaatacttcaaaaaat 1175


Query: 1176 ttcattagaagttcatttggtccaaatgagtctttggtggttggtggctctgaagatggt 1235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1176 ttcattagaagttcatttggtccaaatgagtctttggtggttggtggctctgaagatggt 1235


Query: 1236 tatacttacatttgggatattgaaacttgtaatatccttcaaaaattaggtaccccttca 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1236 tatacttacatttgggatattgaaacttgtaatatccttcaaaaattaggtaccccttca 1295


Query: 1296 aataatatgccaatggtttattctgcaacttggtgtcaagaacaatcattattagcaact 1355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1296 aataatatgccaatggtttattctgcaacttggtgtcaagaacaatcattattagcaact 1355


Query: 1356 tgttctcaagattgttctgtaaaattatggtggtatgataaatcaatgccagttt 1410
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1356 tgttctcaagattgttctgtaaaattatggtggtatgataaatcaatgccagttt 1410


Score = 389 bits (196), Expect = e-108
Identities = 242/250 (96%)
Strand = Plus / Plus


Query: 425 tgaaaaagatttaacaaatagagaaattgaaattaaaaagatagtatcaagtgcagaata 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tgaaaaagatttaacaaatagagaaattgaaattaaaaagatagtatcaagtgcagaata 484


Query: 485 tacaggaccaccnnnnnnnnctatatatttagaggataatacagatatatttgatccaaa 544
|||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tacaggaccaccaaaaaaaactatatatttagaggataatacagatatatttgatccaaa 544


Query: 545 tgaaccacagataaaagaggatataattcgtatgattatacaatatttacaagatgaagg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tgaaccacagataaaagaggatataattcgtatgattatacaatatttacaagatgaagg 604


Query: 605 atatacagcatcattattgacagttcaagatgaagccnnnnnnnnnnatagtattagtat 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 atatacagcatcattattgacagttcaagatgaagccnnnnnnnnnnatagtattagtat 664


Query: 665 taatagtggt 674
||||||||||
Sbjct: 665 taatagtggt 674


Score = 387 bits (195), Expect = e-107
Identities = 195/195 (100%)
Strand = Plus / Plus


Query: 1 atattactcgaacttggttttcaatatttaattataaaattttttatttggaattataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atattactcgaacttggttttcaatatttaattataaaattttttatttggaattataaa 60


Query: 61 gtgtactatagaaaagaaagagaggatagagtgatataatgagtacagataaaaaacaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgtactatagaaaagaaagagaggatagagtgatataatgagtacagataaaaaacaag 120


Query: 121 aaacaattgccaatagcaacaataataataataatacatcaccttcaaatattactactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaacaattgccaatagcaacaataataataataatacatcaccttcaaatattactactc 180


Query: 181 ctactccaacaacag 195
|||||||||||||||
Sbjct: 181 ctactccaacaacag 195


Score = 73.8 bits (37), Expect = 5e-13
Identities = 37/37 (100%)
Strand = Plus / Plus


Query: 347 atcaaatatttcatcatcatcaaattcaacagaacaa 383
|||||||||||||||||||||||||||||||||||||
Sbjct: 347 atcaaatatttcatcatcatcaaattcaacagaacaa 383


Score = 32.2 bits (16), Expect = 1.7
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 141 aataataataataata 156
||||||||||||||||
Sbjct: 384 aataataataataata 399


Score = 32.2 bits (16), Expect = 1.7
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 141 aataataataataata 156
||||||||||||||||
Sbjct: 387 aataataataataata 402


Score = 30.2 bits (15), Expect = 6.7
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 1515 tttatacatcacttt 1529
|||||||||||||||
Sbjct: 1515 tttatacatcacttt 1529


Score = 30.2 bits (15), Expect = 6.7
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 140 caataataataataa 154
|||||||||||||||
Sbjct: 719 caataataataataa 733


>Contig-U14477-1 (Contig-U14477-1Q) /CSM_Contig/Contig-U14477-1Q.Seq.d
Length = 642

Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus


Query: 131 caatagcaacaataataataataatac 157
||||| |||||||||||||||||||||
Sbjct: 6 caataacaacaataataataataatac 32


Score = 30.2 bits (15), Expect = 6.7
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 356 ttcatcatcatcaaattca 374
|||||||||||||| ||||
Sbjct: 124 ttcatcatcatcaacttca 142


>Contig-U10184-1 (Contig-U10184-1Q) /CSM_Contig/Contig-U10184-1Q.Seq.d
Length = 772

Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus


Query: 130 ccaatagcaacaataataataataata 156
||||||||| |||||||||||||||||
Sbjct: 13 ccaatagcagcaataataataataata 39


Score = 36.2 bits (18), Expect = 0.11
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 135 agcaacaataataataataata 156
||||| ||||||||||||||||
Sbjct: 21 agcaataataataataataata 42


Score = 32.2 bits (16), Expect = 1.7
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 141 aataataataataata 156
||||||||||||||||
Sbjct: 30 aataataataataata 45


Score = 30.2 bits (15), Expect = 6.7
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 141 aataataataataat 155
|||||||||||||||
Sbjct: 33 aataataataataat 47


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 37,100
Number of Sequences: 6905
Number of extensions: 37100
Number of successful extensions: 13444
Number of sequences better than 10.0: 1760
length of query: 1529
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1513
effective length of database: 5,564,391
effective search space: 8418923583
effective search space used: 8418923583
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.12. 1
Homology vs DNA
Query= Contig-U12500-1 (Contig-U12500-1Q) /CSM_Contig/Contig-U12500-1Q.Seq.d
(1529 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ446435) Dictyostelium discoideum cDNA clone:ddv62p17, 3' ... 1298 0.0 1
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 1291 0.0 1
(BJ441933) Dictyostelium discoideum cDNA clone:ddv48f07, 3' ... 1283 0.0 1
(BJ446457) Dictyostelium discoideum cDNA clone:ddv62e19, 3' ... 1023 0.0 1
(BJ427552) Dictyostelium discoideum cDNA clone:ddv62e19, 5' ... 369 0.0 4
(BJ423174) Dictyostelium discoideum cDNA clone:ddv48f07, 5' ... 369 0.0 4
(BJ427532) Dictyostelium discoideum cDNA clone:ddv62p17, 5' ... 359 0.0 4
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 46 0.001 3
(BX247869) Zebrafish DNA sequence from clone CH211-67D2 in l... 56 0.004 1
(AC116922) Dictyostelium discoideum chromosome 2 map 6061442... 40 0.013 5
(AE014847) Plasmodium falciparum 3D7 chromosome 12, section ... 42 0.014 7
(AF093689) Dictyostelium discoideum MEK kinase alpha (mkkA) ... 40 0.017 3
(EH009832) USDA-FP_182990 Lysiphlebus testaceipes adult whol... 42 0.020 2
(DY889085) CeleSEQ6603 Cunninghamella elegans pBluescript (E... 52 0.026 2
(AE014837) Plasmodium falciparum 3D7 chromosome 11 section 2... 50 0.026 2
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 50 0.036 3
(AC116918) Dictyostelium discoideum chromosome 2 map 6143698... 44 0.040 3
(AY220914) Dictyostelium discoideum ComB (comB) gene, comple... 44 0.053 4
(AL929357) Plasmodium falciparum strain 3D7, chromosome 9; s... 42 0.060 5
(AL627228) Mouse DNA sequence from clone RP23-137L22 on chro... 52 0.064 1
(AP000977) Homo sapiens genomic DNA, chromosome 11q, clone:R... 52 0.064 1
(AC139161) Rattus norvegicus clone CH230-338A13, WORKING DRA... 52 0.064 1
(AP002767) Homo sapiens genomic DNA, chromosome 11q clone:RP... 52 0.064 1
(AC025321) Homo sapiens chromosome 11 clone RP11-435K5 map 1... 52 0.064 1
(DY886343) CeleSEQ1959 Cunninghamella elegans pBluescript (E... 52 0.064 1
(AU061542) Dictyostelium discoideum slug cDNA, clone SLE595. 52 0.064 1
(BJ411008) Dictyostelium discoideum cDNA clone:ddv2m15, 5' e... 52 0.064 1
(BJ389605) Dictyostelium discoideum cDNA clone:dds19k07, 5' ... 52 0.064 1
(AW822664) uq14b06.y1 Ren Stubbs mouse thymus Mus musculus c... 52 0.064 1
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 48 0.071 2
(AY484462) Dictyostelium discoideum kinesin family member 8 ... 38 0.075 3
(BJ371358) Dictyostelium discoideum cDNA clone:ddc57m17, 5' ... 46 0.075 2
(DY888624) CeleSEQ5786 Cunninghamella elegans pBluescript (E... 40 0.11 2
(AE014846) Plasmodium falciparum 3D7 chromosome 12, section ... 46 0.13 7
(AE014819) Plasmodium falciparum 3D7 chromosome 14 section 4... 38 0.15 2
(CU856208) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 0.15 2
(AC117080) Dictyostelium discoideum chromosome 2 map complem... 42 0.15 3
(CU915395) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 0.15 2
(CU856144) Zebrafish DNA sequence from clone CH73-54D9. 40 0.16 2
(AY254473) Dictyostelium discoideum nucleotide exchange fact... 40 0.18 2
(EL505616) H02_1659_603.AB1 Blood stage Plasmodium falciparu... 38 0.19 2
(EL505638) H03_1659_904.AB1 Blood stage Plasmodium falciparu... 38 0.19 2
(AL954383) Zebrafish DNA sequence from clone CH211-226M11 in... 42 0.19 3
(AF201319) Dugesia polychroa clone Cal1AF5 microsatellite se... 38 0.23 2
(CU138554) Zebrafish DNA sequence from clone DKEY-201H12. 50 0.25 1
(CT573204) Zebrafish DNA sequence from clone CH73-186J5 in l... 50 0.25 1
(CT025648) Zebrafish DNA sequence from clone CH211-22E22 in ... 50 0.25 1
(CR759891) Zebrafish DNA sequence from clone DKEY-261I18 in ... 50 0.25 1
(CR753888) Zebrafish DNA sequence from clone CH211-154E10 in... 50 0.25 1
(BX323579) Zebrafish DNA sequence from clone DKEYP-79E11 in ... 50 0.25 1
(CQ574364) Sequence 2122 from Patent WO0171042. 50 0.25 1
(CT961054) Pig DNA sequence from clone CH242-15K4 on chromos... 50 0.25 1
(CR382401) Plasmodium falciparum chromosome 6, complete sequ... 50 0.25 1
(AL035476) Plasmodium falciparum MAL4P3. 50 0.25 1
(AE014839) Plasmodium falciparum 3D7 chromosome 11 section 4... 50 0.25 1
(AE013599) Drosophila melanogaster chromosome 2R, complete s... 50 0.25 1
(AC007054) Drosophila melanogaster, chromosome 2R, region 41... 50 0.25 1
(BC062632) Homo sapiens hypothetical LOC400590, mRNA (cDNA c... 50 0.25 1
(AC138207) Homo sapiens chromosome 17, clone RP11-848P1, com... 50 0.25 1
(AC027793) Homo sapiens chromosome 17, clone RP11-229K15, co... 50 0.25 1
(AC162783) Danio rerio clone CH211-193C7, WORKING DRAFT SEQU... 50 0.25 1
(CU655830) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 50 0.25 1
(CU302428) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.25 1
(AL844509) Plasmodium falciparum chromosome 13. 50 0.25 1
(AL109815) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 50 0.25 1
(AC214546) Zea mays chromosome 8 clone CH201-491C9; ZMMBBc04... 50 0.25 1
(AC180855) Strongylocentrotus purpuratus clone R3-3069C1, WO... 50 0.25 1
(AC017984) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 50 0.25 1
(BH183207) 023_E_07-21 SmBAC1 Schistosoma mansoni genomic cl... 50 0.25 1
(AL620158) T7 end of clone 023AC04 of library SmBAC1 from st... 50 0.25 1
(CW018476) ZMMBLc0011M10.f ZMMBLc Zea mays genomic clone ZMM... 50 0.25 1
(CG103389) PUJEY02TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 50 0.25 1
(BZ459111) BONNG49TF BO_1.6_2_KB_tot Brassica oleracea genom... 50 0.25 1
(BH981646) odg53b02.b1 B.oleracea002 Brassica oleracea genom... 50 0.25 1
(EL509762) H06_PF-SAU3A-T3-M-P18_D.AB1 Blood stage Plasmodiu... 50 0.25 1
(EL509761) H06_PF-SAU3A-T3-M-P18.AB1 Blood stage Plasmodium ... 50 0.25 1
(EL505445) G06_2272_1.AB1 Blood stage Plasmodium falciparum ... 50 0.25 1
(EL503707) A02_526_1.AB1 Blood stage Plasmodium falciparum c... 50 0.25 1
(EL503506) H04_PFLAB1-L-PLATE19B.AB1 Blood stage Plasmodium ... 50 0.25 1
(EL502365) B12_PFLAB1-M-PLATE6B.AB1 Blood stage Plasmodium f... 50 0.25 1
(EL501903) 096_PFLAB1-M-P16B.AB1 Blood stage Plasmodium falc... 50 0.25 1
(EL492790) A02_PFBAMHI-M-T3-PLATE4A.AB1 Blood stage Plasmodi... 50 0.25 1
(EH013558) USDA-FP_186347 Lysiphlebus testaceipes adult whol... 50 0.25 1
(EB566917) AGENCOURT_52044658 D. virilis EST Drosophila viri... 50 0.25 1
(CD188714) MS1-0063U-A261-H10-U.B MS1-0063 Schistosoma manso... 50 0.25 1
(BX280662) RZPD Homo sapiens cDNA clone IMAGp998P1111627 = I... 50 0.25 1
(BI915218) 603184748F1 NIH_MGC_121 Homo sapiens cDNA clone I... 50 0.25 1
(FF576242) TTEE066TVB Tetrahymena thermophila conjugation cD... 50 0.25 1
(EY317940) CAWX595.fwd CAWX Helobdella robusta Primary Early... 50 0.25 1
(DR952283) EST1143822 Aquilegia cDNA library Aquilegia formo... 38 0.25 2
(DR932952) EST1124491 Aquilegia cDNA library Aquilegia formo... 38 0.30 2
(AC214282) Populus trichocarpa clone POP018-K04, complete se... 38 0.34 6
(FG674837) G1143P333RL10.T0 Anolis carolinensis pooled norma... 44 0.34 2
(CR786569) Zebrafish DNA sequence from clone CH211-267N8. 40 0.35 8
(AC170155) Phakopsora pachyrhizi clone JGIAFNA-1989A17, comp... 42 0.43 4
(AC024154) Homo sapiens chromosome 3 clone RP11-487J12 map 3... 42 0.44 7
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 38 0.48 4
(AC069277) Homo sapiens chromosome 3 clone RP11-529B17 map 3... 42 0.54 5
(AC115868) Mus musculus chromosome 7, clone RP24-329F21, com... 38 0.54 2
(BX510656) Zebrafish DNA sequence from clone CH211-132N7 in ... 38 0.54 2

>(BJ446435) Dictyostelium discoideum cDNA clone:ddv62p17, 3' end,
single read.
Length = 851

Score = 1298 bits (655), Expect = 0.0
Identities = 655/655 (100%)
Strand = Plus / Minus


Query: 756 tgtttattaagtttaaaagcacatgaaggtgatgcatatactgttcaatttcatccaggt 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 tgtttattaagtttaaaagcacatgaaggtgatgcatatactgttcaatttcatccaggt 688


Query: 816 caaaatcatatagcaactggtggttatgataaatcaattcatttatatgatgttagaact 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 caaaatcatatagcaactggtggttatgataaatcaattcatttatatgatgttagaact 628


Query: 876 ggtcaattggttaaatcattctctggtcatactggatccatttcaaaggttattttcaat 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ggtcaattggttaaatcattctctggtcatactggatccatttcaaaggttattttcaat 568


Query: 936 ccacatggtaatttaatcattagtggtagtaaagatagtactattaaattttgggatatc 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ccacatggtaatttaatcattagtggtagtaaagatagtactattaaattttgggatatc 508


Query: 996 gttagtggtgtttgcattaaaacattatcttctcatttgggtgaagtcacttcaatcgct 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gttagtggtgtttgcattaaaacattatcttctcatttgggtgaagtcacttcaatcgct 448


Query: 1056 accaatagcagtggttcctatctattaagtgcttcaaaagataattcaaatcgtctttgg 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 accaatagcagtggttcctatctattaagtgcttcaaaagataattcaaatcgtctttgg 388


Query: 1116 gatataagaaatgctcgtccaattaaacgtttcaaaggtcatcaaaatacttcaaaaaat 1175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gatataagaaatgctcgtccaattaaacgtttcaaaggtcatcaaaatacttcaaaaaat 328


Query: 1176 ttcattagaagttcatttggtccaaatgagtctttggtggttggtggctctgaagatggt 1235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttcattagaagttcatttggtccaaatgagtctttggtggttggtggctctgaagatggt 268


Query: 1236 tatacttacatttgggatattgaaacttgtaatatccttcaaaaattaggtaccccttca 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tatacttacatttgggatattgaaacttgtaatatccttcaaaaattaggtaccccttca 208


Query: 1296 aataatatgccaatggtttattctgcaacttggtgtcaagaacaatcattattagcaact 1355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 aataatatgccaatggtttattctgcaacttggtgtcaagaacaatcattattagcaact 148


Query: 1356 tgttctcaagattgttctgtaaaattatggtggtatgataaatcaatgccagttt 1410
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 tgttctcaagattgttctgtaaaattatggtggtatgataaatcaatgccagttt 93

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,341,280,131
Number of extensions: 88929405
Number of successful extensions: 11008429
Number of sequences better than 10.0: 532
Length of query: 1529
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1505
Effective length of database: 97,308,875,965
Effective search space: 146449858327325
Effective search space used: 146449858327325
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7. 3
Homology vs Protein
Query= Contig-U12500-1 (Contig-U12500-1Q) /CSM_Contig/Contig-U12500-1Q.Seq.d
(1529 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC117075_70(AC117075|pid:none) Dictyostelium discoideum chromoso... 457 e-127
CP000686_859(CP000686|pid:none) Roseiflexus sp. RS-1, complete g... 137 1e-30
(Q9D7H2) RecName: Full=WD repeat-containing protein 5B; &AK0092... 137 1e-30
(Q5RE95) RecName: Full=WD repeat-containing protein 5B; &CR8576... 135 3e-30
CP000117_1553(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 135 3e-30
CP001037_1914(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 134 7e-30
CP001037_1323(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 134 9e-30
CP000828_167(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 134 1e-29
(Q8YTC2) RecName: Full=Uncharacterized WD repeat-containing prot... 133 2e-29
CP001037_4818(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 132 3e-29
CP001291_1144(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 132 3e-29
AK002149_1(AK002149|pid:none) Homo sapiens cDNA FLJ11287 fis, cl... 132 3e-29
AJ011376_1(AJ011376|pid:none) Homo sapiens mRNA for hypothetical... 132 3e-29
(Q2KIG2) RecName: Full=WD repeat-containing protein 5; &BC11265... 132 3e-29
BC052124_1(BC052124|pid:none) Danio rerio WD repeat domain 5, mR... 132 3e-29
AK144091_1(AK144091|pid:none) Mus musculus RCB-0559 K-1 . F1 cDN... 132 4e-29
CP000828_20(CP000828|pid:none) Acaryochloris marina MBIC11017, c... 132 4e-29
AE1810(AE1810) WD-40 repeat protein [imported] - Nostoc sp. (str... 131 8e-29
AP009552_6258(AP009552|pid:none) Microcystis aeruginosa NIES-843... 130 1e-28
CP000828_5861(CP000828|pid:none) Acaryochloris marina MBIC11017,... 130 1e-28
CP000117_2804(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 130 1e-28
CP001037_1143(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 130 1e-28
BA000045_4356(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 130 2e-28
AM778957_201(AM778957|pid:none) Microcystis aeruginosa PCC 7806 ... 129 2e-28
BA000045_1965(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 129 2e-28
AP009552_3821(AP009552|pid:none) Microcystis aeruginosa NIES-843... 129 3e-28
AP007163_34(AP007163|pid:none) Aspergillus oryzae RIB40 genomic ... 129 4e-28
AI2493(AI2493) WD-repeat protein [imported] - Nostoc sp. (strain... 129 4e-28
(Q5M786) RecName: Full=WD repeat-containing protein 5; &BC08100... 128 5e-28
BC077844_1(BC077844|pid:none) Xenopus laevis WD repeat domain 5,... 128 5e-28
CP001291_1208(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 128 6e-28
AL772282_6(AL772282|pid:none) Mouse DNA sequence from clone RP23... 127 8e-28
CP000117_2617(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 127 8e-28
BC008547_1(BC008547|pid:none) Mus musculus WD repeat domain 5, m... 126 2e-27
EF083131_1(EF083131|pid:none) Picea sitchensis clone WS02722_J02... 126 2e-27
CU074274_1(CU074274|pid:none) Podospora anserina genomic DNA, NW... 125 3e-27
AM746676_8405(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 125 4e-27
CP000807_36(CP000807|pid:none) Cyanothece sp. ATCC 51142 linear ... 125 5e-27
FN357410_12(FN357410|pid:none) Schistosoma mansoni genome sequen... 124 7e-27
CP001037_5630(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 124 9e-27
AP007169_1(AP007169|pid:none) Aspergillus oryzae RIB40 genomic D... 124 1e-26
BA000045_2888(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 124 1e-26
AP007175_262(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 122 3e-26
BA000045_4351(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 122 3e-26
(Q17963) RecName: Full=WD repeat-containing protein tag-125; &T... 122 3e-26
(Q00808) RecName: Full=Vegetative incompatibility protein HET-E-... 121 6e-26
AF323583_1(AF323583|pid:none) Podospora anserina beta transducin... 121 6e-26
CU074270_1(CU074270|pid:none) Podospora anserina genomic DNA, NW... 120 1e-25
AF323582_1(AF323582|pid:none) Podospora anserina beta transducin... 120 2e-25
CP001099_1375(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,... 120 2e-25
AF323584_1(AF323584|pid:none) Podospora anserina beta transducin... 120 2e-25
CP000117_4826(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 119 2e-25
(Q93847) RecName: Full=Uncharacterized WD repeat-containing prot... 119 2e-25
AK105499_1(AK105499|pid:none) Oryza sativa Japonica Group cDNA c... 119 3e-25
BT052263_1(BT052263|pid:none) Medicago truncatula clone MTYF9_FA... 119 3e-25
CU633453_76(CU633453|pid:none) Podospora anserina genomic DNA ch... 119 4e-25
CP000839_311(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 118 5e-25
CP000117_2838(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 118 7e-25
CP000806_2172(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 117 9e-25
DQ151642_1(DQ151642|pid:none) Chlamydomonas reinhardtii WD repea... 117 1e-24
CU074316_1(CU074316|pid:none) Podospora anserina genomic DNA, NW... 117 1e-24
CU640366_848(CU640366|pid:none) Podospora anserina genomic DNA c... 117 1e-24
CP000828_3726(CP000828|pid:none) Acaryochloris marina MBIC11017,... 116 2e-24
AF323585_1(AF323585|pid:none) Podospora anserina beta transducin... 116 3e-24
CP001037_148(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 116 3e-24
CP000117_4653(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 115 3e-24
AM462218_2(AM462218|pid:none) Vitis vinifera contig VV78X125617.... 115 4e-24
AC159435_6(AC159435|pid:none) Trypanosoma brucei chromosome 8 cl... 115 4e-24
CP000492_814(CP000492|pid:none) Chlorobium phaeobacteroides DSM ... 115 4e-24
CP000117_5003(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 114 1e-23
AH2195(AH2195) hypothetical protein alr3119 [imported] - Nostoc ... 114 1e-23
(P49695) RecName: Full=Probable serine/threonine-protein kinase ... 112 3e-23
BT064699_1(BT064699|pid:none) Zea mays full-length cDNA clone ZM... 112 3e-23
(P74442) RecName: Full=Uncharacterized WD repeat-containing prot... 112 4e-23
BT075698_1(BT075698|pid:none) Osmerus mordax clone omor-rgc-001-... 112 4e-23
CP001291_1475(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 112 4e-23
AE016818_101(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 112 5e-23
(Q0P593) RecName: Full=WD repeat-containing protein 69; &BC1203... 112 5e-23
AP009552_5491(AP009552|pid:none) Microcystis aeruginosa NIES-843... 112 5e-23
CP000806_3916(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 111 6e-23
CP001037_5275(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 111 6e-23
CP001337_2947(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 111 6e-23
(Q5FWQ6) RecName: Full=WD repeat-containing protein 69; &BC0892... 111 6e-23
AJ719967_1(AJ719967|pid:none) Gallus gallus mRNA for hypothetica... 111 8e-23
CP001344_3209(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 110 1e-22
CP001291_2528(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 110 1e-22
AP009552_1527(AP009552|pid:none) Microcystis aeruginosa NIES-843... 110 1e-22
(Q6P2Y2) RecName: Full=WD repeat-containing protein 69; &BC0642... 110 1e-22
AC1842(AC1842) WD-40 repeat protein [imported] - Nostoc sp. (str... 110 2e-22
CP000117_3846(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 110 2e-22
(Q8N136) RecName: Full=WD repeat-containing protein 69; &AC0730... 109 3e-22
CP000119_130(CP000119|pid:none) Anabaena variabilis ATCC 29413 p... 109 3e-22
AK301861_1(AK301861|pid:none) Homo sapiens cDNA FLJ54195 complet... 109 3e-22
CP000393_1374(CP000393|pid:none) Trichodesmium erythraeum IMS101... 109 3e-22
(Q5BK30) RecName: Full=WD repeat-containing protein 69; &BC0912... 109 3e-22
AM778958_177(AM778958|pid:none) Microcystis aeruginosa PCC 7806 ... 109 3e-22
CP000828_3398(CP000828|pid:none) Acaryochloris marina MBIC11017,... 109 3e-22
CP001101_2134(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 109 3e-22
AM746676_3634(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 108 4e-22
(Q7ZUV2) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 108 5e-22
(Q8W1K8) RecName: Full=Protein Mut11; AltName: Full=Mut11p; &AF... 108 5e-22
CU633438_311(CU633438|pid:none) Podospora anserina genomic DNA c... 108 5e-22
CP001037_247(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 108 5e-22
CP000117_2178(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 108 7e-22
CP000686_3299(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 108 7e-22
CP001037_1497(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 108 7e-22
AB174186_1(AB174186|pid:none) Macaca fascicularis brain cDNA clo... 108 7e-22
(Q6PE01) RecName: Full=U5 small nuclear ribonucleoprotein 40 kDa... 108 7e-22
(Q1LV15) RecName: Full=WD repeat-containing protein 69; &BC1244... 108 7e-22
BC124403_1(BC124403|pid:none) Danio rerio WD repeat domain 69, m... 107 9e-22
CP001108_1939(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 107 9e-22
AK098821_1(AK098821|pid:none) Homo sapiens cDNA FLJ25955 fis, cl... 107 1e-21
AK342470_1(AK342470|pid:none) Acyrthosiphon pisum ACYPI008815 mR... 107 1e-21
BT037412_1(BT037412|pid:none) Zea mays full-length cDNA clone ZM... 107 1e-21
CP000828_5917(CP000828|pid:none) Acaryochloris marina MBIC11017,... 107 2e-21
CP000828_5338(CP000828|pid:none) Acaryochloris marina MBIC11017,... 107 2e-21
CP001037_1432(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 107 2e-21
BC045034_1(BC045034|pid:none) Xenopus laevis U5 snRNP-specific 4... 107 2e-21
AK016201_1(AK016201|pid:none) Mus musculus adult male testis cDN... 106 2e-21
BT077645_1(BT077645|pid:none) Lepeophtheirus salmonis Pacific fo... 106 2e-21
FN357618_1(FN357618|pid:none) Schistosoma mansoni genome sequenc... 106 2e-21
BT080509_1(BT080509|pid:none) Caligus clemensi clone ccle-evs-50... 106 2e-21
AE014134_53(AE014134|pid:none) Drosophila melanogaster chromosom... 106 2e-21
CP000828_160(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 106 2e-21
CU928173_540(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 106 3e-21
AC133571_4(AC133571|pid:none) Medicago truncatula clone mth2-10h... 106 3e-21
CP000393_3289(CP000393|pid:none) Trichodesmium erythraeum IMS101... 106 3e-21
CP000845_57(CP000845|pid:none) Acaryochloris marina MBIC11017 pl... 106 3e-21
CP000393_4067(CP000393|pid:none) Trichodesmium erythraeum IMS101... 105 3e-21
(P38129) RecName: Full=Transcription initiation factor TFIID sub... 105 3e-21
AP003224_20(AP003224|pid:none) Oryza sativa Japonica Group genom... 105 3e-21
(O75529) RecName: Full=TAF5-like RNA polymerase II p300/CBP-asso... 105 3e-21
AJ009770_1(AJ009770|pid:none) Homo sapiens mRNA for putative tra... 105 3e-21
(Q91WQ5) RecName: Full=TAF5-like RNA polymerase II p300/CBP-asso... 105 4e-21
AM778950_12(AM778950|pid:none) Microcystis aeruginosa PCC 7806 g... 105 4e-21
BC075582_1(BC075582|pid:none) Xenopus tropicalis TAF5-like RNA p... 105 4e-21
CP000844_164(CP000844|pid:none) Acaryochloris marina MBIC11017 p... 105 4e-21
BC160901_1(BC160901|pid:none) Rattus norvegicus TAF5-like RNA po... 105 4e-21
AD1842(AD1842) WD-40 repeat protein [imported] - Nostoc sp. (str... 105 6e-21
CU928169_531(CU928169|pid:none) Kluyveromyces thermotolerans str... 105 6e-21
BC051783_1(BC051783|pid:none) Danio rerio small nuclear ribonucl... 105 6e-21
AY223237_1(AY223237|pid:none) Schistosoma japonicum clone ZZD369... 105 6e-21
AP003517_26(AP003517|pid:none) Oryza sativa Japonica Group genom... 105 6e-21
CP001100_2468(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 104 8e-21
BT059738_1(BT059738|pid:none) Salmo salar clone ssal-rgf-521-021... 104 8e-21
CP001037_139(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 104 8e-21
CP001325_706(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 104 1e-20
FN314118_1(FN314118|pid:none) Schistosoma japonicum isolate Anhu... 104 1e-20
CP000828_5196(CP000828|pid:none) Acaryochloris marina MBIC11017,... 104 1e-20
CP001037_4354(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 104 1e-20
AF083383_1(AF083383|pid:none) Homo sapiens 38kDa splicing factor... 104 1e-20
AB264266_1(AB264266|pid:none) Chamaecyparis obtusa CC2196 gene f... 104 1e-20
AM778942_51(AM778942|pid:none) Microcystis aeruginosa PCC 7806 g... 103 1e-20
BC045954_1(BC045954|pid:none) Danio rerio PRP19/PSO4 homolog (S.... 103 1e-20
CP000686_3296(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 103 1e-20
AM746676_2689(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 103 1e-20
AB264263_1(AB264263|pid:none) Chamaecyparis pisifera CC2196 gene... 103 1e-20
CR812943_6(CR812943|pid:none) Zebrafish DNA sequence from clone ... 103 2e-20
CP001038_141(CP001038|pid:none) Nostoc punctiforme PCC 73102 pla... 103 2e-20
AY814155_1(AY814155|pid:none) Schistosoma japonicum SJCHGC06272 ... 103 2e-20
AP009552_1750(AP009552|pid:none) Microcystis aeruginosa NIES-843... 103 2e-20
AK076998_1(AK076998|pid:none) Mus musculus adult male testis cDN... 103 2e-20
AY463620_1(AY463620|pid:none) Arabidopsis thaliana TAF5 (At5g251... 103 2e-20
BC158602_1(BC158602|pid:none) Rattus norvegicus sperm associated... 103 2e-20
AB222602_1(AB222602|pid:none) Mus musculus prp19 beta mRNA, comp... 103 2e-20
FN357341_7(FN357341|pid:none) Schistosoma mansoni genome sequenc... 103 2e-20
AM238664_1098(AM238664|pid:none) Streptomyces ambofaciens ATCC 2... 103 2e-20
AY812578_1(AY812578|pid:none) Schistosoma japonicum SJCHGC09556 ... 102 3e-20
BT075125_1(BT075125|pid:none) Osmerus mordax clone omor-eva-518-... 102 3e-20
CP001037_6067(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 102 3e-20
CP000502_174(CP000502|pid:none) Pichia stipitis CBS 6054 chromos... 102 3e-20
CP000393_3212(CP000393|pid:none) Trichodesmium erythraeum IMS101... 102 3e-20
AB264261_1(AB264261|pid:none) Thujopsis dolabrata CC2196 gene fo... 102 3e-20
EU417752_1(EU417752|pid:none) Sus scrofa pre-mRNA processing fac... 102 4e-20
CP001328_404(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 102 4e-20
(Q08E38) RecName: Full=Pre-mRNA-processing factor 19; AltName: F... 102 4e-20
BA000039_488(BA000039|pid:none) Thermosynechococcus elongatus BP... 102 5e-20
BT047461_1(BT047461|pid:none) Salmo salar clone ssal-rgb2-603-17... 102 5e-20
BT086255_1(BT086255|pid:none) Zea mays full-length cDNA clone ZM... 102 5e-20
EU961763_1(EU961763|pid:none) Zea mays clone 238133 unknown mRNA. 102 5e-20
AK167824_1(AK167824|pid:none) Mus musculus CRL-1722 L5178Y-R cDN... 102 5e-20
CR380959_230(CR380959|pid:none) Candida glabrata strain CBS138 c... 102 5e-20
BC168104_1(BC168104|pid:none) Xenopus tropicalis cDNA clone MGC:... 102 5e-20
(Q5JTN6) RecName: Full=WD repeat-containing protein 38; &AL3549... 101 6e-20
BC108505_1(BC108505|pid:none) Xenopus laevis hypothetical protei... 101 6e-20
AP008213_479(AP008213|pid:none) Oryza sativa (japonica cultivar-... 101 6e-20
EU591959_1(EU591959|pid:none) Sus scrofa PRP19/PSO4 pre-mRNA pro... 101 6e-20
CP001013_1798(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 101 8e-20
AL939118_27(AL939118|pid:none) Streptomyces coelicolor A3(2) com... 101 8e-20
AP009493_3398(AP009493|pid:none) Streptomyces griseus subsp. gri... 101 8e-20
CP000089_3569(CP000089|pid:none) Dechloromonas aromatica RCB, co... 100 1e-19
BC077273_1(BC077273|pid:none) Xenopus laevis cDNA clone IMAGE:40... 100 1e-19
AB264260_1(AB264260|pid:none) Cryptomeria japonica CC2196 gene f... 100 1e-19
AL392174_12(AL392174|pid:none) Arabidopsis thaliana DNA chromoso... 100 1e-19
(Q4V7Y7) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 100 1e-19
AF052432_1(AF052432|pid:none) Homo sapiens katanin p80 subunit m... 100 1e-19
AL732349_11(AL732349|pid:none) Oryza sativa genomic DNA, chromos... 100 1e-19
AL606668_18(AL606668|pid:none) Oryza sativa genomic DNA, chromos... 100 1e-19
CP000393_2151(CP000393|pid:none) Trichodesmium erythraeum IMS101... 100 2e-19
AC022457_10(AC022457|pid:none) Oryza sativa chromosome 10 BAC OS... 100 2e-19
AP007175_253(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 100 2e-19
CP001344_1900(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 100 2e-19
AK342167_1(AK342167|pid:none) Acyrthosiphon pisum ACYPI005525 mR... 100 2e-19
CP000581_540(CP000581|pid:none) Ostreococcus lucimarinus CCE9901... 100 2e-19
AB264259_1(AB264259|pid:none) Cryptomeria japonica CC2196 gene f... 100 2e-19
AJ252128_1(AJ252128|pid:none) Yarrowia lipolytica tup1 gene for ... 100 2e-19
BC074533_1(BC074533|pid:none) Xenopus tropicalis PRP19/PSO4 homo... 100 2e-19
BC044093_1(BC044093|pid:none) Xenopus laevis nuclear matrix prot... 100 2e-19
(Q8BG40) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 100 2e-19
(Q9BVA0) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 100 2e-19
AK010364_1(AK010364|pid:none) Mus musculus ES cells cDNA, RIKEN ... 100 2e-19
AP009552_5466(AP009552|pid:none) Microcystis aeruginosa NIES-843... 100 2e-19
BC149991_1(BC149991|pid:none) Bos taurus katanin p80 (WD repeat ... 100 2e-19
T19550(T19550;T20311) hypothetical protein D1054.15 - Caenorhabd... 100 2e-19
AY597210_1(AY597210|pid:none) Chlamydomonas reinhardtii katanin ... 100 2e-19
AK031630_1(AK031630|pid:none) Mus musculus 13 days embryo male t... 100 2e-19
CP000393_1925(CP000393|pid:none) Trichodesmium erythraeum IMS101... 100 2e-19
AY891382_1(AY891382|pid:none) Synthetic construct Homo sapiens c... 100 2e-19
AP004273_30(AP004273|pid:none) Oryza sativa Japonica Group genom... 100 2e-19
FM992695_78(FM992695|pid:none) Candida dubliniensis CD36 chromos... 99 3e-19
S33263(S33263;S45729;A54593)transcription initiation factor IID-... 99 3e-19
A96638(A96638) hypothetical protein F11P17.7 [imported] - Arabid... 99 3e-19
BA000045_2244(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 99 3e-19
CP000117_2100(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 99 3e-19
(P49846) RecName: Full=Transcription initiation factor TFIID sub... 99 3e-19
AL513463_20(AL513463|pid:none) Neurospora crassa DNA linkage gro... 99 4e-19
AG2400(AG2400) WD-repeat protein [imported] - Nostoc sp. (strain... 99 4e-19
(Q90ZL4) RecName: Full=Lissencephaly-1 homolog B; &AY032881_1(A... 99 4e-19
BC161681_1(BC161681|pid:none) Xenopus laevis TBP-associated fact... 99 4e-19
AP007151_696(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 99 4e-19
CP000117_2876(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 99 5e-19
S36113(S36113)LIS-1 protein - human 99 5e-19
AK147793_1(AK147793|pid:none) Mus musculus melanocyte cDNA, RIKE... 99 5e-19
(P43034) RecName: Full=Platelet-activating factor acetylhydrolas... 99 5e-19
AK147309_1(AK147309|pid:none) Mus musculus adult male brain UNDE... 99 5e-19
(Q5REG7) RecName: Full=Platelet-activating factor acetylhydrolas... 99 5e-19
(P43033) RecName: Full=Platelet-activating factor acetylhydrolas... 99 5e-19
CP000854_3359(CP000854|pid:none) Mycobacterium marinum M, comple... 99 5e-19
CU074315_1(CU074315|pid:none) Podospora anserina genomic DNA, NW... 98 7e-19
AB169014_1(AB169014|pid:none) Macaca fascicularis testis cDNA, c... 98 7e-19
BT045765_1(BT045765|pid:none) Salmo salar clone ssal-rgf-530-312... 98 7e-19
AF323581_1(AF323581|pid:none) Podospora anserina beta transducin... 98 7e-19
(Q9PTR5) RecName: Full=Platelet-activating factor acetylhydrolas... 98 7e-19
CR405685_1(CR405685|pid:none) Zebrafish DNA sequence from clone ... 98 9e-19
(Q55AR8) RecName: Full=U5 small nuclear ribonucleoprotein 40 kDa... 98 9e-19
BC056720_1(BC056720|pid:none) Danio rerio PRP4 pre-mRNA processi... 98 9e-19
CP000117_2956(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 98 9e-19
CP000393_3435(CP000393|pid:none) Trichodesmium erythraeum IMS101... 98 9e-19
CP001097_2083(CP001097|pid:none) Chlorobium limicola DSM 245, co... 98 9e-19
(Q8H0T9) RecName: Full=Katanin p80 WD40 repeat-containing subuni... 98 9e-19
BT034088_1(BT034088|pid:none) Zea mays full-length cDNA clone ZM... 98 9e-19
AB018110_4(AB018110|pid:none) Arabidopsis thaliana genomic DNA, ... 97 1e-18
AG1889(AG1889) WD-40 repeat protein [imported] - Nostoc sp. (str... 97 1e-18
BC136340_1(BC136340|pid:none) Homo sapiens TAF5 RNA polymerase I... 97 1e-18
AK088953_1(AK088953|pid:none) Mus musculus 2 days neonate thymus... 97 1e-18
CP001037_1947(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 97 1e-18
U75309_1(U75309|pid:none) Human TBP-associated factor (hTAFII100... 97 1e-18
(Q9GL51) RecName: Full=Platelet-activating factor acetylhydrolas... 97 1e-18
BC052268_1(BC052268|pid:none) Homo sapiens TAF5 RNA polymerase I... 97 1e-18
(Q15542) RecName: Full=Transcription initiation factor TFIID sub... 97 1e-18
(Q8C092) RecName: Full=Transcription initiation factor TFIID sub... 97 1e-18
CP000842_108(CP000842|pid:none) Acaryochloris marina MBIC11017 p... 97 1e-18
BC156180_1(BC156180|pid:none) Synthetic construct Mus musculus c... 97 1e-18
(Q803D2) RecName: Full=Lissencephaly-1 homolog B; &BC044530_1(B... 97 1e-18
BT045543_1(BT045543|pid:none) Salmo salar clone ssal-rgf-524-224... 97 2e-18
AL078635_13(AL078635|pid:none) Amycolatopsis orientalis cosmid p... 97 2e-18
CP000117_2488(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 97 2e-18
AY082798_1(AY082798|pid:none) Penicillium marneffei TupA protein... 97 2e-18
AM920427_459(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 97 2e-18
AP008216_940(AP008216|pid:none) Oryza sativa (japonica cultivar-... 97 2e-18
FM992688_6(FM992688|pid:none) Candida dubliniensis CD36 chromoso... 97 2e-18
AH2154(AH2154) WD-repeat protein [imported] - Nostoc sp. (strain... 97 2e-18
(Q6NVM2) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 97 2e-18
AK111641_1(AK111641|pid:none) Oryza sativa Japonica Group cDNA c... 96 3e-18
CU928168_461(CU928168|pid:none) Kluyveromyces thermotolerans str... 96 3e-18
AC117072_4(AC117072|pid:none) Dictyostelium discoideum chromosom... 96 3e-18
AP008209_1416(AP008209|pid:none) Oryza sativa (japonica cultivar... 96 3e-18
AC007259_17(AC007259|pid:none) Arabidopsis thaliana chromosome I... 96 4e-18
CP000393_3425(CP000393|pid:none) Trichodesmium erythraeum IMS101... 96 4e-18
AM269966_5(AM269966|pid:none) Aspergillus niger contig An01c0190... 96 4e-18
CU928165_302(CU928165|pid:none) Kluyveromyces thermotolerans str... 96 4e-18
(P25635) RecName: Full=Periodic tryptophan protein 2; AltName: F... 96 5e-18
CP000839_184(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 96 5e-18
(Q61FW2) RecName: Full=F-box/WD repeat-containing protein sel-10... 96 5e-18
DQ647383_1(DQ647383|pid:none) Chlamydomonas reinhardtii lissence... 96 5e-18
T20593(T20593) hypothetical protein F08G12.2 - Caenorhabditis el... 95 6e-18
AF000265_6(AF000265|pid:none) Caenorhabditis elegans cosmid C18E... 95 6e-18
FM992693_193(FM992693|pid:none) Candida dubliniensis CD36 chromo... 95 6e-18
AP008931_213(AP008931|pid:none) Rhodococcus erythropolis PR4 pla... 95 6e-18
M31733_1(M31733|pid:none) S.cerevisiae TUP1 protein gene, comple... 95 6e-18
AE010299_2454(AE010299|pid:none) Methanosarcina acetivorans str.... 95 6e-18
(Q42384) RecName: Full=PP1/PP2A phosphatases pleiotropic regulat... 95 6e-18
CP001099_247(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, ... 95 6e-18
AB493682_1(AB493682|pid:none) Arabidopsis thaliana At4g15900 mRN... 95 6e-18
CP000117_1538(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 95 8e-18
CP000099_2768(CP000099|pid:none) Methanosarcina barkeri str. Fus... 95 8e-18
CR382136_675(CR382136|pid:none) Debaryomyces hansenii strain CBS... 95 8e-18
CU640366_389(CU640366|pid:none) Podospora anserina genomic DNA c... 95 8e-18
(P16649) RecName: Full=General transcriptional corepressor TUP1;... 95 8e-18
AM270328_15(AM270328|pid:none) Aspergillus niger contig An15c001... 95 8e-18
X16365_1(X16365|pid:none) Yeast suppressor gene for flocculation... 95 8e-18
CP000820_6355(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 95 8e-18
L25109_1(L25109|pid:none) Mus musculus LIS mRNA, partial cds. 95 8e-18
CU928165_262(CU928165|pid:none) Kluyveromyces thermotolerans str... 94 1e-17
AY608603_1(AY608603|pid:none) Exophiala dermatitidis Tup1p gene,... 94 1e-17
CR382137_211(CR382137|pid:none) Debaryomyces hansenii strain CBS... 94 1e-17
(Q5ZIU8) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 94 1e-17
AP007175_233(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 94 1e-17
DQ410670_1(DQ410670|pid:none) Gallus gallus brain p80 katanin mR... 94 1e-17
AM270178_91(AM270178|pid:none) Aspergillus niger contig An08c023... 94 1e-17
CP000839_340(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 94 1e-17
DQ147949_1(DQ147949|pid:none) Macaca mulatta clone dl1_d21_t7_05... 94 1e-17
GM960737_1(GM960737|pid:none) Sequence 7691 from Patent WO200814... 94 1e-17
(Q5RD06) RecName: Full=WD repeat-containing protein 51B; &CR858... 94 2e-17
BC045888_1(BC045888|pid:none) Danio rerio WD repeat domain 51A, ... 94 2e-17
AY738474_1(AY738474|pid:none) Gemmata sp. Wa1-1 WD-repeat protei... 94 2e-17
AE014296_3092(AE014296|pid:none) Drosophila melanogaster chromos... 94 2e-17
AE016817_477(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 94 2e-17
CR382133_567(CR382133|pid:none) Debaryomyces hansenii strain CBS... 94 2e-17
AF098070_1(AF098070|pid:none) Drosophila melanogaster Lis1 homol... 94 2e-17
(Q7KNS3) RecName: Full=Lissencephaly-1 homolog; Short=L... 94 2e-17
(Q9D994) RecName: Full=WD repeat-containing protein 38; &AK0072... 93 2e-17
(O15736) RecName: Full=Protein tipD; &AF019236_1(AF019236|pid:n... 93 2e-17
AY599846_1(AY599846|pid:none) Rhizopus stolonifer G-protein beta... 93 2e-17
BT080589_1(BT080589|pid:none) Caligus clemensi clone ccle-evs-50... 93 2e-17
AF005740_1(AF005740|pid:none) Kluyveromyces lactis transcription... 93 2e-17
BC145995_1(BC145995|pid:none) Mus musculus WD repeat domain 69, ... 93 2e-17
BA000045_1630(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 93 2e-17
GM960745_1(GM960745|pid:none) Sequence 7699 from Patent WO200814... 93 2e-17
AP007164_19(AP007164|pid:none) Aspergillus oryzae RIB40 genomic ... 93 2e-17
AK016977_1(AK016977|pid:none) Mus musculus adult male testis cDN... 93 2e-17
T22703(T22703)hypothetical protein F55B12.3 - Caenorhabditis ele... 93 3e-17
(Q93794) RecName: Full=F-box/WD repeat-containing protein sel-10... 93 3e-17
GM960743_1(GM960743|pid:none) Sequence 7697 from Patent WO200814... 93 3e-17
GM960733_1(GM960733|pid:none) Sequence 7687 from Patent WO200814... 93 3e-17
CR382128_39(CR382128|pid:none) Yarrowia lipolytica strain CLIB12... 93 3e-17
FN357354_71(FN357354|pid:none) Schistosoma mansoni genome sequen... 93 3e-17
AJ720686_1(AJ720686|pid:none) Gallus gallus mRNA for hypothetica... 93 3e-17
(Q8I0F4) RecName: Full=Lissencephaly-1 homolog; AltName: Full=Dd... 93 3e-17
BC126532_1(BC126532|pid:none) Bos taurus cleavage stimulation fa... 93 3e-17
(Q9VZF4) RecName: Full=F-box/WD repeat-containing protein 7; Alt... 93 3e-17
CP001110_343(CP001110|pid:none) Pelodictyon phaeoclathratiforme ... 92 4e-17
FN357585_7(FN357585|pid:none) Schistosoma mansoni genome sequenc... 92 4e-17
AF533440_1(AF533440|pid:none) Pisum sativum G protein beta subun... 92 4e-17
Z74192_1(Z74192|pid:none) S.cerevisiae chromosome IV reading fra... 92 4e-17
CP000806_3920(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 92 4e-17
AP004312_39(AP004312|pid:none) Synechocystis sp. PCC 6803 plasmi... 92 4e-17
(P53622) RecName: Full=Coatomer subunit alpha; AltName: Full=Alp... 92 4e-17
CT573213_1700(CT573213|pid:none) Frankia alni str. ACN14A chromo... 92 5e-17
CP001344_497(CP001344|pid:none) Cyanothece sp. PCC 7425, complet... 92 5e-17
BC169262_1(BC169262|pid:none) Synthetic construct Homo sapiens c... 92 5e-17
CP001576_177(CP001576|pid:none) Micromonas sp. RCC299 chromosome... 92 5e-17
AB044749_1(AB044749|pid:none) Homo sapiens mRNA for WDC146, comp... 92 5e-17
AF339501_1(AF339501|pid:none) Pichia angusta alpha-COP-like prot... 92 5e-17
(Q9C0J8) RecName: Full=WD repeat-containing protein 33; AltName:... 92 5e-17
AB086191_1(AB086191|pid:none) Mus musculus mRNA for putative WDC... 92 5e-17
AF474160_1(AF474160|pid:none) Candida glabrata global repressor ... 92 5e-17
AK150710_1(AK150710|pid:none) Mus musculus bone marrow macrophag... 92 5e-17
BC167995_1(BC167995|pid:none) Xenopus tropicalis hypothetical pr... 92 5e-17
AL832918_1(AL832918|pid:none) Homo sapiens mRNA; cDNA DKFZp762M0... 92 7e-17
(Q54Y96) RecName: Full=WD40 repeat-containing protein smu1; 92 7e-17
CP000117_1621(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 92 7e-17
EU962813_1(EU962813|pid:none) Zea mays clone 245733 PP1/PP2A pho... 92 7e-17
BC025379_1(BC025379|pid:none) Homo sapiens sperm associated anti... 92 7e-17
AE013599_2870(AE013599|pid:none) Drosophila melanogaster chromos... 92 7e-17
AE016814_243(AE016814|pid:none) Ashbya gossypii (= Eremothecium ... 92 7e-17
DQ120483_1(DQ120483|pid:none) Rattus norvegicus strain WKY guani... 91 9e-17
AC007067_21(AC007067|pid:none) Genomic sequence for Arabidopsis ... 91 9e-17
BC056099_1(BC056099|pid:none) Xenopus laevis hypothetical protei... 91 9e-17
AB090160_1(AB090160|pid:none) Triticum aestivum TaGB1 mRNA for G... 91 9e-17
BA000045_2655(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 91 9e-17
U88324_1(U88324|pid:none) Rattus norvegicus G protein beta1 subu... 91 9e-17
FN392320_711(FN392320|pid:none) Pichia pastoris GS115 chromosome... 91 9e-17
CR457105_1(CR457105|pid:none) Homo sapiens full open reading fra... 91 9e-17
(O54929) RecName: Full=WD repeat and SOCS box-containing protein... 91 9e-17
AB075697_1(AB075697|pid:none) Leishmania amazonensis mRNA for LA... 91 9e-17
AF034804_1(AF034804|pid:none) Leishmania major LACK gene, comple... 91 9e-17
EU969680_1(EU969680|pid:none) Zea mays clone 333954 WD-repeat pr... 91 1e-16
AL596139_5(AL596139|pid:none) BAC A of library A from Tetraodon ... 91 1e-16
CP000806_3577(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 91 1e-16
AY648770_1(AY648770|pid:none) Danio rerio FLJ11294-like mRNA, pa... 91 1e-16
(Q9NYS7) RecName: Full=WD repeat and SOCS box-containing protein... 91 1e-16
AF163324_1(AF163324|pid:none) Homo sapiens WSB-2 mRNA, complete ... 91 1e-16
FN392320_453(FN392320|pid:none) Pichia pastoris GS115 chromosome... 91 1e-16
AK295555_1(AK295555|pid:none) Homo sapiens cDNA FLJ59692 complet... 91 1e-16
BT065868_1(BT065868|pid:none) Zea mays full-length cDNA clone ZM... 91 1e-16
CT573213_3533(CT573213|pid:none) Frankia alni str. ACN14A chromo... 91 1e-16
CP000501_7(CP000501|pid:none) Pichia stipitis CBS 6054 chromosom... 91 1e-16
EU752724_1(EU752724|pid:none) Populus tremula isolate swl35-63 U... 90 2e-16
EU752717_1(EU752717|pid:none) Populus tremula isolate swl35-16 U... 90 2e-16
BT037560_1(BT037560|pid:none) Zea mays full-length cDNA clone ZM... 90 2e-16
AY205294_1(AY205294|pid:none) Sitobion avenae heterotrimeric gua... 90 2e-16
AF016369_1(AF016369|pid:none) Homo sapiens U4/U6 small nuclear r... 90 2e-16
AL449305_7(AL449305|pid:none) Human DNA sequence from clone RP11... 90 2e-16
AF299085_1(AF299085|pid:none) Myxococcus xanthus Bap1 (bap1) gen... 90 2e-16
AJ575934_4(AJ575934|pid:none) Micromonospora purpurea DOS biosyn... 90 2e-16
(Q55563) RecName: Full=Uncharacterized WD repeat-containing prot... 90 2e-16
AJ628149_32(AJ628149|pid:none) Micromonospora echinospora genomi... 90 2e-16
CT573213_677(CT573213|pid:none) Frankia alni str. ACN14A chromos... 90 2e-16
EU752714_1(EU752714|pid:none) Populus tremula isolate swl35-3 U5... 90 2e-16
AK313131_1(AK313131|pid:none) Homo sapiens cDNA, FLJ93619, highl... 90 2e-16
AF515696_1(AF515696|pid:none) Arabidopsis thaliana cleavage stim... 90 2e-16
(Q7T2F6) RecName: Full=WD repeat and SOCS box-containing protein... 90 2e-16
(Q09715) RecName: Full=Transcriptional repressor tup11; &CU3296... 90 2e-16
CP000820_4167(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 90 2e-16
AB008269_6(AB008269|pid:none) Arabidopsis thaliana genomic DNA, ... 90 2e-16
EU752732_1(EU752732|pid:none) Populus tremula isolate swl35-95 U... 90 3e-16
(P62883) RecName: Full=Guanine nucleotide-binding protein subuni... 90 3e-16
RGKWB(S09591) GTP-binding regulatory protein beta chain - Caenor... 90 3e-16
AF034793_1(AF034793|pid:none) Leishmania donovani activated prot... 90 3e-16
CR382123_385(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 90 3e-16
CP001323_695(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 90 3e-16
CP001323_694(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 90 3e-16
CU928178_471(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 90 3e-16
AK090114_1(AK090114|pid:none) Mus musculus RCB-1283 B16 melanoma... 90 3e-16
CU633901_36(CU633901|pid:none) Podospora anserina genomic DNA ch... 90 3e-16
CP000393_145(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 90 3e-16
(O43017) RecName: Full=Set1 complex component swd3; Sho... 90 3e-16
(Q3MHE2) RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp... 90 3e-16
(Q6C709) RecName: Full=Pre-mRNA-splicing factor PRP46; AltName: ... 90 3e-16
(Q9DAW6) RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp... 90 3e-16
AB171315_1(AB171315|pid:none) Macaca fascicularis brain cDNA clo... 90 3e-16
EU016105_1(EU016105|pid:none) Leishmania donovani chagasi activa... 90 3e-16
(P17343) RecName: Full=Guanine nucleotide-binding protein subuni... 90 3e-16
(Q05048) RecName: Full=Cleavage stimulation factor 50 kDa subuni... 90 3e-16
L13387_1(L13387|pid:none) Homo sapiens (clone 6-1) Miller-Dieker... 90 3e-16
DQ120487_1(DQ120487|pid:none) Rattus norvegicus strain WKY guani... 90 3e-16
GM960771_1(GM960771|pid:none) Sequence 7725 from Patent WO200814... 90 3e-16
(Q5R5W8) RecName: Full=Guanine nucleotide-binding protein G(I)/G... 89 3e-16
CP000383_752(CP000383|pid:none) Cytophaga hutchinsonii ATCC 3340... 89 3e-16
(Q4P9P9) RecName: Full=Nuclear distribution protein PAC1; AltNam... 89 3e-16
CP000393_2802(CP000393|pid:none) Trichodesmium erythraeum IMS101... 89 3e-16
AF357839_1(AF357839|pid:none) Leishmania donovani LACK protectiv... 89 3e-16
AM778930_22(AM778930|pid:none) Microcystis aeruginosa PCC 7806 g... 89 3e-16
CP000383_3602(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 89 3e-16
(P93107) RecName: Full=Flagellar WD repeat-containing protein Pf... 89 3e-16
(Q6TMK6) RecName: Full=Guanine nucleotide-binding protein G(I)/G... 89 3e-16
BC159319_1(BC159319|pid:none) Xenopus tropicalis hypothetical pr... 89 3e-16
FN357843_1(FN357843|pid:none) Schistosoma mansoni genome sequenc... 89 3e-16
(Q8MYE8) RecName: Full=Probable proteasomal ATPase-associated fa... 89 3e-16
M36430_1(M36430|pid:none) Human transducin beta-1 subunit mRNA, ... 89 4e-16
FN357484_14(FN357484|pid:none) Schistosoma mansoni genome sequen... 89 4e-16
AF310672_1(AF310672|pid:none) Homo sapiens PF20 variant 1a (PF20... 89 4e-16
U34958_1(U34958|pid:none) Rat G protein beta 1 subunit mRNA, com... 89 4e-16
AB071106_1(AB071106|pid:none) Macaca fascicularis testis cDNA cl... 89 4e-16
X03073_1(X03073|pid:none) Bovine retinal mRNA for transducin bet... 89 4e-16
CP000148_1200(CP000148|pid:none) Geobacter metallireducens GS-15... 89 4e-16
CP001291_3285(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 89 4e-16
AY738473_1(AY738473|pid:none) Gemmata sp. Wa1-1 WD-repeat protei... 89 4e-16
AF101480_1(AF101480|pid:none) Trypanosoma brucei pf20 homolog (T... 89 4e-16
AK101611_1(AK101611|pid:none) Oryza sativa Japonica Group cDNA c... 89 6e-16
AF462796_1(AF462796|pid:none) Arabidopsis thaliana At1g73720/F25... 89 6e-16
AY626793_1(AY626793|pid:none) Litopenaeus vannamei G protein bet... 89 6e-16
(Q8N0X2) RecName: Full=Sperm-associated antigen 16 protein; AltN... 89 6e-16
CR749477_1(CR749477|pid:none) Homo sapiens mRNA; cDNA DKFZp781G1... 89 6e-16
AC012679_13(AC012679|pid:none) Arabidopsis thaliana chromosome 1... 89 6e-16
CR855235_18(CR855235|pid:none) Oryza sativa genomic DNA, chromos... 89 6e-16
(Q9UTC7) RecName: Full=Uncharacterized WD repeat-containing prot... 89 6e-16
AK302351_1(AK302351|pid:none) Homo sapiens cDNA FLJ53372 complet... 89 6e-16
AY889414_1(AY889414|pid:none) Synthetic construct Homo sapiens c... 88 7e-16
EU752729_1(EU752729|pid:none) Populus tremula isolate swl35-84 U... 88 7e-16
AF034805_1(AF034805|pid:none) Leishmania braziliensis LACK gene,... 88 7e-16
AE014134_2770(AE014134|pid:none) Drosophila melanogaster chromos... 88 7e-16
CR380957_394(CR380957|pid:none) Candida glabrata strain CBS138 c... 88 7e-16
AB180753_1(AB180753|pid:none) Cyprinus carpio Gbeta1 mRNA for G-... 88 7e-16
EU344782_1(EU344782|pid:none) Euprymna scolopes light organ G pr... 88 7e-16
FN392322_77(FN392322|pid:none) Pichia pastoris GS115 chromosome ... 88 7e-16
EU752715_1(EU752715|pid:none) Populus tremula isolate swl35-3 U5... 88 7e-16
CR954210_112(CR954210|pid:none) Ostreococcus tauri strain OTTH05... 88 7e-16
AF125254_1(AF125254|pid:none) Leishmania panamensis activated pr... 88 7e-16
CP000820_6636(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 88 7e-16
AY457171_1(AY457171|pid:none) Leishmania amazonensis antigenic W... 88 7e-16
BC043798_1(BC043798|pid:none) Xenopus laevis cleavage stimulatio... 88 7e-16
CP000393_3924(CP000393|pid:none) Trichodesmium erythraeum IMS101... 88 7e-16
AP007157_289(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 88 7e-16
AM502224_3(AM502224|pid:none) Leishmania infantum chromosome 6. 88 7e-16
AP007151_1154(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 88 1e-15
AF112205_1(AF112205|pid:none) Homo sapiens WSB-1 protein mRNA, c... 88 1e-15
(O45040) RecName: Full=Guanine nucleotide-binding protein G(I)/G... 88 1e-15
AE2490(AE2490) WD-repeat protein [imported] - Nostoc sp. (strain... 88 1e-15
BA000045_725(BA000045|pid:none) Gloeobacter violaceus PCC 7421 D... 88 1e-15
(Q7RY30) RecName: Full=Nuclear distribution protein pac-1a; AltN... 88 1e-15
AF053883_1(AF053883|pid:none) Emericella nidulans coatomer alpha... 88 1e-15
(P16520) RecName: Full=Guanine nucleotide-binding protein G(I)/G... 88 1e-15
EU752722_1(EU752722|pid:none) Populus tremula isolate swl35-54 U... 88 1e-15
EU752741_1(EU752741|pid:none) Populus tremula isolate swl35-fra3... 88 1e-15
(Q9Y6I7) RecName: Full=WD repeat and SOCS box-containing protein... 88 1e-15
AB209283_1(AB209283|pid:none) Homo sapiens mRNA for guanine nucl... 88 1e-15
BT012225_1(BT012225|pid:none) Arabidopsis thaliana At5g13480 gen... 88 1e-15
AK074917_1(AK074917|pid:none) Homo sapiens cDNA FLJ90436 fis, cl... 88 1e-15
FN357369_2(FN357369|pid:none) Schistosoma mansoni genome sequenc... 88 1e-15
BC075548_1(BC075548|pid:none) Xenopus tropicalis MGC89488 protei... 88 1e-15
(P23232) RecName: Full=Guanine nucleotide-binding protein subuni... 87 1e-15
AY054181_1(AY054181|pid:none) Arabidopsis thaliana AT3g16650/MGL... 87 1e-15
AE014298_1819(AE014298|pid:none) Drosophila melanogaster chromos... 87 1e-15
S49821(S49821)PRL2 protein - Arabidopsis thaliana (fragment) 87 1e-15
CR936408_3(CR936408|pid:none) Zebrafish DNA sequence from clone ... 87 1e-15
(Q8BHD1) RecName: Full=WD repeat-containing protein 51B; &AK045... 87 1e-15
BT041112_1(BT041112|pid:none) Zea mays full-length cDNA clone ZM... 87 1e-15
AB022217_11(AB022217|pid:none) Arabidopsis thaliana genomic DNA,... 87 1e-15

>AC117075_70(AC117075|pid:none) Dictyostelium discoideum chromosome 2
map 5201047-5455781 strain AX4, complete sequence.
Length = 730

Score = 457 bits (1175), Expect = e-127
Identities = 219/219 (100%), Positives = 219/219 (100%)
Frame = +3

Query: 765 SLKAHEGDAYTVQFHPGQNHIATGGYDKSIHLYDVRTGQLVKSFSGHTGSISKVIFNPHG 944
SLKAHEGDAYTVQFHPGQNHIATGGYDKSIHLYDVRTGQLVKSFSGHTGSISKVIFNPHG
Sbjct: 512 SLKAHEGDAYTVQFHPGQNHIATGGYDKSIHLYDVRTGQLVKSFSGHTGSISKVIFNPHG 571

Query: 945 NLIISGSKDSTIKFWDIVSGVCIKTLSSHLGEVTSIATNSSGSYLLSASKDNSNRLWDIR 1124
NLIISGSKDSTIKFWDIVSGVCIKTLSSHLGEVTSIATNSSGSYLLSASKDNSNRLWDIR
Sbjct: 572 NLIISGSKDSTIKFWDIVSGVCIKTLSSHLGEVTSIATNSSGSYLLSASKDNSNRLWDIR 631

Query: 1125 NARPIKRFKGHQNTSKNFIRSSFGPNESLVVGGSEDGYTYIWDIETCNILQKLGTPSNNM 1304
NARPIKRFKGHQNTSKNFIRSSFGPNESLVVGGSEDGYTYIWDIETCNILQKLGTPSNNM
Sbjct: 632 NARPIKRFKGHQNTSKNFIRSSFGPNESLVVGGSEDGYTYIWDIETCNILQKLGTPSNNM 691

Query: 1305 PMVYSATWCQEQSLLATCSQDCSVKLWWYDKSMPVFNSN 1421
PMVYSATWCQEQSLLATCSQDCSVKLWWYDKSMPVFNSN
Sbjct: 692 PMVYSATWCQEQSLLATCSQDCSVKLWWYDKSMPVFNSN 730

Score = 150 bits (380), Expect = 9e-35
Identities = 75/75 (100%), Positives = 75/75 (100%)
Frame = +3

Query: 417 DIIEKDLTNREIEIKKIVSSAEYTGPPKKTIYLEDNTDIFDPNEPQIKEDIIRMIIQYLQ 596
DIIEKDLTNREIEIKKIVSSAEYTGPPKKTIYLEDNTDIFDPNEPQIKEDIIRMIIQYLQ
Sbjct: 107 DIIEKDLTNREIEIKKIVSSAEYTGPPKKTIYLEDNTDIFDPNEPQIKEDIIRMIIQYLQ 166

Query: 597 DEGYTASLLTVQDEA 641
DEGYTASLLTVQDEA
Sbjct: 167 DEGYTASLLTVQDEA 181

Score = 65.9 bits (159), Expect = 4e-09
Identities = 46/219 (21%), Positives = 98/219 (44%), Gaps = 16/219 (7%)
Frame = +3

Query: 777 HEGDAYTVQFHPGQNHIATGGYDKSIHLYDVRTGQLVKSFSGHTGSISKVIFNPHGNLII 956
H+ + V+F +A+G D +I L++ TG + + +G+T I + + +GNL+
Sbjct: 374 HKKNVKCVEFIGNGLTLASGSSDNTIKLWNTETGTCINTLTGNTSRIWDLSSSSNGNLLA 433

Query: 957 SGSKDSTIKFWDI---VSGVCIKTLSSHLGEVTSIATNSSGSYLLSA------------- 1088
S + D IK WD+ S + + SS +TS T+ S +++
Sbjct: 434 SSAGDGIIKIWDVSQNKSSISSSSSSSSSSSITSSITSGINSISINSGINNINNNLNNLN 493

Query: 1089 SKDNSNRLWDIRNARPIKRFKGHQNTSKNFIRSSFGPNESLVVGGSEDGYTYIWDIETCN 1268
+ +N+N ++ N + K H+ + F P ++ + G D +++D+ T
Sbjct: 494 NNNNNNNKSNVINNNCLLSLKAHEGDAYTV---QFHPGQNHIATGGYDKSIHLYDVRTGQ 550

Query: 1269 ILQKLGTPSNNMPMVYSATWCQEQSLLATCSQDCSVKLW 1385
+++ S + + + +L+ + S+D ++K W
Sbjct: 551 LVKSF---SGHTGSISKVIFNPHGNLIISGSKDSTIKFW 586

Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/75 (34%), Positives = 47/75 (62%)
Frame = +3

Query: 897 SGHTGSISKVIFNPHGNLIISGSKDSTIKFWDIVSGVCIKTLSSHLGEVTSIATNSSGSY 1076
SGH ++ V F +G + SGS D+TIK W+ +G CI TL+ + + ++++S+G+
Sbjct: 372 SGHKKNVKCVEFIGNGLTLASGSSDNTIKLWNTETGTCINTLTGNTSRIWDLSSSSNGNL 431

Query: 1077 LLSASKDNSNRLWDI 1121
L S++ D ++WD+
Sbjct: 432 LASSAGDGIIKIWDV 446

Score = 37.4 bits (85), Expect = 1.5
Identities = 25/78 (32%), Positives = 36/78 (46%)
Frame = +3

Query: 1023 SSHLGEVTSIATNSSGSYLLSASKDNSNRLWDIRNARPIKRFKGHQNTSKNFIRSSFGPN 1202
S H V + +G L S S DN+ +LW+ I G NTS+ + SS N
Sbjct: 372 SGHKKNVKCVEFIGNGLTLASGSSDNTIKLWNTETGTCINTLTG--NTSRIWDLSS-SSN 428

Query: 1203 ESLVVGGSEDGYTYIWDI 1256
+L+ + DG IWD+
Sbjct: 429 GNLLASSAGDGIIKIWDV 446

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,697,598,881
Number of extensions: 29722600
Number of successful extensions: 128244
Number of sequences better than 10.0: 5049
Number of HSP's gapped: 109994
Number of HSP's successfully gapped: 14215
Length of query: 509
Length of database: 1,051,180,864
Length adjustment: 133
Effective length of query: 376
Effective length of database: 620,718,517
Effective search space: 233390162392
Effective search space used: 233390162392
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.41 alm: 0.44 top: 0.53 tms: 0.00 mit: 0.25 mip: 0.00
nuc: 0.04 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

40.0 %: cytoplasmic
40.0 %: nuclear
8.0 %: mitochondrial
4.0 %: cytoskeletal
4.0 %: vesicles of secretory system
4.0 %: endoplasmic reticulum

>> prediction for Contig-U12500-1 is cyt

VS (DIR, S) 0
VH (FL, L) 3
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0