| Contig-U12490-1 |
| Contig ID |
Contig-U12490-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1363 |
| Chromosome number (1..6, M) |
3 |
| Chromosome length |
6358359 |
| Start point |
4239327 |
| End point |
4240672 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
1 |
| Number of EST |
2 |
| Link to clone list |
U12490 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.12. 1 |
| Homology vs DNA |
Query= Contig-U12490-1 (Contig-U12490-1Q) /CSM_Contig/Contig-U12490-1Q.Seq.d
(1373 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ441573) Dictyostelium discoideum cDNA clone:ddv47k04, 3' ... 1146 0.0 2
(BJ422819) Dictyostelium discoideum cDNA clone:ddv47k04, 5' ... 848 0.0 2
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 50 2e-05 9
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 44 0.001 8
(BJ407552) Dictyostelium discoideum cDNA clone:dds38m22, 3' ... 42 0.002 2
(BJ383981) Dictyostelium discoideum cDNA clone:ddc47i20, 3' ... 42 0.004 2
(CP000879) Petrotoga mobilis SJ95, complete genome. 54 0.014 1
(BJ440740) Dictyostelium discoideum cDNA clone:ddv44h13, 3' ... 44 0.016 2
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 48 0.019 8
(AC177480) Strongylocentrotus purpuratus clone R3-61H2, WORK... 44 0.024 5
(AC092008) Bos taurus clone RP42-87O4, WORKING DRAFT SEQUENC... 52 0.057 1
(AC092004) Bos taurus clone RP42-170B3, WORKING DRAFT SEQUENCE. 52 0.057 1
(AC171840) Bos taurus clone CH240-188D17, WORKING DRAFT SEQU... 52 0.057 1
(DU204318) 1098574024499 CHORI-243 Ovis aries genomic clone ... 52 0.057 1
(AC116922) Dictyostelium discoideum chromosome 2 map 6061442... 36 0.058 7
(AE014826) Plasmodium falciparum 3D7 chromosome 14 section 1... 38 0.16 8
(EK258397) 1095462046148 Global-Ocean-Sampling_GS-31-01-01-1... 34 0.17 2
(BJ394137) Dictyostelium discoideum cDNA clone:dds33m24, 5' ... 38 0.20 3
(AC158020) Bos taurus clone CH240-154K3, *** SEQUENCING IN P... 50 0.22 1
(AC176669) Strongylocentrotus purpuratus clone R3-112G5, WOR... 36 0.49 2
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 48 0.63 8
(BJ406037) Dictyostelium discoideum cDNA clone:dds33m24, 3' ... 34 0.64 2
(AU271361) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 34 0.65 2
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 36 0.67 12
(FM164151) Arabidopsis thaliana pre-miRNA 395f, ecotype Ws-0. 48 0.89 1
(FM164149) Arabidopsis thaliana pre-miRNA 395f, ecotype Tsu-1. 48 0.89 1
(FM164148) Arabidopsis thaliana pre-miRNA 395f, ecotype Tsu-0. 48 0.89 1
(FM164143) Arabidopsis thaliana pre-miRNA 395f, ecotype RRS-7. 48 0.89 1
(FM164139) Arabidopsis thaliana pre-miRNA 395f, ecotype Mt-0. 48 0.89 1
(FM164136) Arabidopsis thaliana pre-miRNA 395f, ecotype Kil-0. 48 0.89 1
(FM164135) Arabidopsis thaliana pre-miRNA 395f, ecotype Ka-0. 48 0.89 1
(FM164130) Arabidopsis thaliana pre-miRNA 395f, ecotype Est-1. 48 0.89 1
(FM164127) Arabidopsis thaliana pre-miRNA 395f, ecotype C24. 48 0.89 1
(FM164125) Arabidopsis thaliana pre-miRNA 395f, ecotype Bla-10. 48 0.89 1
(FM164123) Arabidopsis thaliana pre-miRNA 395f, ecotype Ag-0. 48 0.89 1
(FM164122) Arabidopsis thaliana pre-miRNA 395f, ecotype Est-0. 48 0.89 1
(EU549566) Arabidopsis thaliana isolate CS6608 miR395f prima... 48 0.89 1
(EU549564) Arabidopsis thaliana isolate CS6182 miR395f prima... 48 0.89 1
(EU549561) Arabidopsis thaliana isolate CS906 miR395f primar... 48 0.89 1
(EU549559) Arabidopsis thaliana isolate CS6896 miR395f prima... 48 0.89 1
(EU549558) Arabidopsis thaliana isolate CS6824 miR395f prima... 48 0.89 1
(EU549555) Arabidopsis thaliana isolate CS6799 miR395f prima... 48 0.89 1
(EU549550) Arabidopsis thaliana isolate CS6732 miR395f prima... 48 0.89 1
(EU549545) Arabidopsis thaliana isolate CS901 miR395f primar... 48 0.89 1
(EU518937) Homo sapiens NEL-like 1 (chicken) (NELL1) gene, c... 48 0.89 1
(AC010811) Homo sapiens chromosome 11, clone RP11-3E17, comp... 48 0.89 1
(DT294112) JGI_CAAW5578.rev CAAW Pimephales promelas testis ... 48 0.89 1
(DT291450) JGI_CAAW3670.rev CAAW Pimephales promelas testis ... 48 0.89 1
(DT208066) JGI_CAAS15211.rev CAAS Pimephales promelas brain ... 48 0.89 1
(EV476385) Fc_nor_03G10_M13F Folsomia candida normalized cDN... 48 0.89 1
(AC116920) Dictyostelium discoideum chromosome 2 map 4415041... 36 2.7 7
(AM874609) Venerupis (Ruditapes) philippinarum EST, 5' end s... 44 2.9 2
(BJ424050) Dictyostelium discoideum cDNA clone:ddv51a10, 5' ... 44 3.3 2
(CR840695) GR0AAA9CF11RM1 INRA BAC Bos taurus genomic clone ... 44 3.4 2
(BJ423493) Dictyostelium discoideum cDNA clone:ddv49k10, 5' ... 44 3.5 2
(BV424171) S237P6525RH12.T0 PortugueseWaterDog Canis familia... 46 3.5 1
(AC219117) Macaca mulatta BAC CH250-551J8 (Children's Hospi... 46 3.5 1
(AC210644) Macaca mulatta BAC CH250-509B23 (Children's Hosp... 46 3.5 1
(AC202674) Macaca mulatta BAC CH250-420H18 () complete sequ... 46 3.5 1
(AL583825) Human DNA sequence from clone RP11-362H12 on chro... 46 3.5 1
(AC104094) Homo sapiens BAC clone RP11-1383E23 from 7, compl... 46 3.5 1
(AC152624) Bos taurus clone CH240-14A23, WORKING DRAFT SEQUE... 46 3.5 1
(AC146251) Pan troglodytes chromosome UNK clone RP43-27O3, *... 46 3.5 1
(AC107254) Rattus norvegicus clone CH230-74B18, *** SEQUENCI... 46 3.5 1
(CU914325) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.5 1
(CU914233) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.5 1
(CU855846) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.5 1
(CU607059) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.5 1
(CU606992) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.5 1
(CU571142) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.5 1
(CU570905) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.5 1
(CU468809) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.5 1
(CU468069) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.5 1
(CU466329) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.5 1
(CU151859) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.5 1
(AC220191) Bos taurus clone CH240-365K8, WORKING DRAFT SEQUE... 46 3.5 1
(AC210711) Macaca mulatta clone CH250-466C3, WORKING DRAFT S... 46 3.5 1
(AC210640) Macaca mulatta clone CH250-408K19, WORKING DRAFT ... 46 3.5 1
(AC179982) Strongylocentrotus purpuratus clone R3-19B18, WOR... 46 3.5 1
(AC177726) Strongylocentrotus purpuratus clone R3-1008P4, WO... 46 3.5 1
(AC177270) Strongylocentrotus purpuratus clone R3-43M15, WOR... 46 3.5 1
(AC176795) Strongylocentrotus purpuratus clone R3-3106P18, W... 46 3.5 1
(AC167674) Bos taurus clone CH240-196I16, WORKING DRAFT SEQU... 46 3.5 1
(AC011821) Homo sapiens chromosome 3 clone RP11-8C12 map 3, ... 46 3.5 1
(DX585266) MUGQ_CH252P056A11Sp6_AV1060_048 CHORI-252 Vervet ... 46 3.5 1
(CT156170) Sus scrofa genomic clone PigE-182A9, genomic surv... 46 3.5 1
(CT125140) Sus scrofa genomic clone PigE-183A12, genomic sur... 46 3.5 1
(CL358403) RPCI44_414N1.r RPCI-44 Sus scrofa genomic clone R... 46 3.5 1
(CE524162) tigr-gss-dog-17000365696180 Dog Library Canis lup... 46 3.5 1
(CP000139) Bacteroides vulgatus ATCC 8482, complete genome. 46 3.5 1
(AE001437) Clostridium acetobutylicum ATCC 824, complete gen... 46 3.5 1
(DJ374660) Identification of Essential Genes in Prokaryotes. 42 3.6 2
(DD121120) STAPHYLOCOCCUS AUREUS PROTEINS AND NUCLEIC ACIDS. 42 3.6 2
(DD088845) A method for identification, isolation and produc... 42 3.6 2
(CS711013) Sequence 3553 from Patent EP1829892. 42 3.6 2
(CS274068) Sequence 16 from Patent EP1630172. 42 3.6 2
(CS252731) Sequence 16 from Patent EP1616876. 42 3.6 2
(AX620590) Sequence 3553 from Patent WO02094868. 42 3.6 2
(AX583639) Sequence 16 from Patent WO02059148. 42 3.6 2
(DJ377603) Identification of Essential Genes in Prokaryotes. 42 3.6 2
>(BJ441573) Dictyostelium discoideum cDNA clone:ddv47k04, 3' end,
single read.
Length = 695
Score = 1146 bits (578), Expect(2) = 0.0
Identities = 578/578 (100%)
Strand = Plus / Minus
Query: 680 ttgcaggtttaaatttaccactcgataaagatggtattgaaatcgttgtaaatattacaa 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 ttgcaggtttaaatttaccactcgataaagatggtattgaaatcgttgtaaatattacaa 636
Query: 740 attatcaattcctaagtggattaaatactttacaattgcgtttcaattcatttgccaatg 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 attatcaattcctaagtggattaaatactttacaattgcgtttcaattcatttgccaatg 576
Query: 800 aaattgttattaaagatagtgatgacgatgatgaagattccgatagttcaacaataaatt 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 aaattgttattaaagatagtgatgacgatgatgaagattccgatagttcaacaataaatt 516
Query: 860 atgataatggatgtaatgaaagagaagctgaaattgatacaaaaaatattgacccttcaa 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 atgataatggatgtaatgaaagagaagctgaaattgatacaaaaaatattgacccttcaa 456
Query: 920 aaactttaaactatatttcaattaaaaagaattcaaaggtactctttggtagattcatta 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aaactttaaactatatttcaattaaaaagaattcaaaggtactctttggtagattcatta 396
Query: 980 atattgccatctctgattcaagacaaacttttattacaagtgaaattattgaagaaaata 1039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 atattgccatctctgattcaagacaaacttttattacaagtgaaattattgaagaaaata 336
Query: 1040 caaattcttcagctattacaattggtattaatttacctcattgtgttgattcatgtttta 1099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 caaattcttcagctattacaattggtattaatttacctcattgtgttgattcatgtttta 276
Query: 1100 tagatcctcaattcacactctcaccagattattcaacttataaattctcatgtgtcgtta 1159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tagatcctcaattcacactctcaccagattattcaacttataaattctcatgtgtcgtta 216
Query: 1160 taattgtacctccttccagagtttggataattgtaattgttgtggttatacctaccatta 1219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 taattgtacctccttccagagtttggataattgtaattgttgtggttatacctaccatta 156
Query: 1220 ttgcttcggttgctctttattttggtattagatattat 1257
||||||||||||||||||||||||||||||||||||||
Sbjct: 155 ttgcttcggttgctctttattttggtattagatattat 118
Score = 54.0 bits (27), Expect(2) = 0.0
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 1266 tagatattcaattagactatatactag 1292
|||||||||||||||||||||||||||
Sbjct: 109 tagatattcaattagactatatactag 83
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,401,814,970
Number of extensions: 80690294
Number of successful extensions: 6431605
Number of sequences better than 10.0: 116
Length of query: 1373
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1349
Effective length of database: 97,308,875,965
Effective search space: 131269673676785
Effective search space used: 131269673676785
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7. 3 |
| Homology vs Protein |
Query= Contig-U12490-1 (Contig-U12490-1Q) /CSM_Contig/Contig-U12490-1Q.Seq.d
(1373 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC116963_42(AC116963|pid:none) Dictyostelium discoideum chromoso... 171 6e-41
AC116920_24(AC116920|pid:none) Dictyostelium discoideum chromoso... 117 7e-25
AC116956_34(AC116956|pid:none) Dictyostelium discoideum chromoso... 114 8e-24
AC117075_64(AC117075|pid:none) Dictyostelium discoideum chromoso... 111 7e-23
AC117081_43(AC117081|pid:none) Dictyostelium discoideum chromoso... 110 9e-23
AC117081_39(AC117081|pid:none) Dictyostelium discoideum chromoso... 108 6e-22
AC116920_20(AC116920|pid:none) Dictyostelium discoideum chromoso... 107 1e-21
AC116982_41(AC116982|pid:none) Dictyostelium discoideum chromoso... 103 2e-20
AC116967_8(AC116967|pid:none) Dictyostelium discoideum chromosom... 100 9e-20
AC116967_7(AC116967|pid:none) Dictyostelium discoideum chromosom... 96 2e-18
AC117075_65(AC117075|pid:none) Dictyostelium discoideum chromoso... 91 1e-16
AC116960_61(AC116960|pid:none) Dictyostelium discoideum chromoso... 89 5e-16
AC115598_37(AC115598|pid:none) Dictyostelium discoideum chromoso... 81 8e-14
AC116920_25(AC116920|pid:none) Dictyostelium discoideum chromoso... 81 1e-13
AM231718_1(AM231718|pid:none) Gallus gallus mRNA for tenascin-W ... 74 9e-12
BC144305_1(BC144305|pid:none) Homo sapiens cDNA clone MGC:177842... 74 9e-12
AK127044_1(AK127044|pid:none) Homo sapiens cDNA FLJ45101 fis, cl... 74 9e-12
AL049689_1(AL049689|pid:none) Novel human mRNA from chromosome 1... 74 9e-12
(Q9UQP3) RecName: Full=Tenascin-N; Short=TN-N; Flags: P... 74 9e-12
(Q9UMG7) RecName: Full=Tenascin-X; Short=TN-X; AltName:... 74 1e-11
AL049547_2(AL049547|pid:none) Human DNA sequence from clone RP1-... 74 1e-11
AL645922_24(AL645922|pid:none) Human DNA sequence from clone XXb... 74 1e-11
X71923_1(X71923|pid:none) H.sapiens XB gene for tenascin-X, exon... 74 1e-11
AJ580920_1(AJ580920|pid:none) Mus musculus mRNA for tenascin-W p... 74 2e-11
(Q80Z71) RecName: Full=Tenascin-N; Short=TN-N; Flags: P... 74 2e-11
BC138335_1(BC138335|pid:none) Mus musculus tenascin N, mRNA (cDN... 74 2e-11
AB010266_2(AB010266|pid:none) Mus musculus Creb-rp, Tnx, Cyp21 g... 71 8e-11
AC117075_41(AC117075|pid:none) Dictyostelium discoideum chromoso... 71 8e-11
X08030_1(X08030|pid:none) Chicken mRNA fragment for tenascin (cT... 70 1e-10
AL773560_5(AL773560|pid:none) Pig DNA sequence from clone PigI-5... 70 2e-10
EU596506_1(EU596506|pid:none) Rattus norvegicus tenascin C (Tnc)... 70 2e-10
(Q80YX1) RecName: Full=Tenascin; Short=TN; AltName: Ful... 69 3e-10
AL732556_3(AL732556|pid:none) Mouse DNA sequence from clone RP24... 69 3e-10
AL732556_1(AL732556|pid:none) Mouse DNA sequence from clone RP24... 69 3e-10
AL110498_8(AL110498|pid:none) Caenorhabditis elegans YAC Y64G10A... 68 9e-10
T27283(T27283)hypothetical protein Y64G10A.f - Caenorhabditis el... 68 9e-10
X56160_1(X56160|pid:none) Human mRNA for tenascin. 66 3e-09
BX890618_1(BX890618|pid:none) Zebrafish DNA sequence from clone ... 65 6e-09
BX088690_1(BX088690|pid:none) Zebrafish DNA sequence from clone ... 65 6e-09
(Q8BYI9) RecName: Full=Tenascin-R; Short=TN-R; AltName:... 65 8e-09
(Q05546) RecName: Full=Tenascin-R; Short=TN-R; AltName:... 65 8e-09
BC132392_1(BC132392|pid:none) Mus musculus tenascin R, mRNA (cDN... 65 8e-09
AL627123_1(AL627123|pid:none) Mouse DNA sequence from clone RP23... 64 1e-08
(Q80V70) RecName: Full=Multiple epidermal growth factor-like dom... 64 1e-08
AK134303_1(AK134303|pid:none) Mus musculus 13 days embryo male t... 64 1e-08
AK173032_1(AK173032|pid:none) Mus musculus mRNA for mKIAA0815 pr... 64 1e-08
BC058571_1(BC058571|pid:none) Mus musculus multiple EGF-like-dom... 64 1e-08
BC129830_1(BC129830|pid:none) Homo sapiens tenascin R (restricti... 64 1e-08
X98085_1(X98085|pid:none) H.sapiens mRNA for tenascin-R. 64 1e-08
AK295823_1(AK295823|pid:none) Homo sapiens cDNA FLJ60578 complet... 64 1e-08
Z94055_1(Z94055|pid:none) Human DNA sequence from clone RP1-24M1... 64 1e-08
AB210038_1(AB210038|pid:none) Homo sapiens mRNA for TNC variant ... 64 2e-08
AF461685_1(AF461685|pid:none) Mus musculus Jedi-736 protein mRNA... 64 2e-08
BC168665_1(BC168665|pid:none) Rattus norvegicus platelet endothe... 64 2e-08
AK304015_1(AK304015|pid:none) Homo sapiens cDNA FLJ60213 complet... 64 2e-08
AF444274_1(AF444274|pid:none) Mus musculus Jedi protein mRNA, co... 64 2e-08
AB058677_1(AB058677|pid:none) Homo sapiens mRNA for MEGF11 prote... 63 2e-08
AB300051_1(AB300051|pid:none) Homo sapiens mRNA for MEGF11, comp... 63 2e-08
BC020198_1(BC020198|pid:none) Homo sapiens multiple EGF-like-dom... 63 2e-08
(P24821) RecName: Full=Tenascin; Short=TN; AltName: Ful... 63 2e-08
(Q96KG7) RecName: Full=Multiple epidermal growth factor-like dom... 63 2e-08
BC117419_1(BC117419|pid:none) Homo sapiens multiple EGF-like-dom... 63 2e-08
CR749437_1(CR749437|pid:none) Homo sapiens mRNA; cDNA DKFZp781K1... 63 2e-08
AL834326_1(AL834326|pid:none) Homo sapiens mRNA; cDNA DKFZp434L1... 63 2e-08
AC116984_70(AC116984|pid:none) Dictyostelium discoideum chromoso... 62 4e-08
AK148084_1(AK148084|pid:none) Mus musculus B16 F10Y cells cDNA, ... 62 4e-08
M24630_1(M24630|pid:none) Human hexabrachion mRNA, partial cds. 62 4e-08
(Q8VIK5) RecName: Full=Platelet endothelial aggregation receptor... 62 4e-08
AL032657_4(AL032657|pid:none) Caenorhabditis elegans YAC Y47H9C,... 62 5e-08
BX004856_1(BX004856|pid:none) Zebrafish DNA sequence from clone ... 61 8e-08
BC163556_1(BC163556|pid:none) Danio rerio tenascin C, mRNA (cDNA... 61 8e-08
DQ096731_1(DQ096731|pid:none) Danio rerio tenascin-C (TNC) mRNA,... 61 8e-08
BC151843_1(BC151843|pid:none) Homo sapiens tenascin C, mRNA (cDN... 61 8e-08
AX817295_1(AX817295|pid:none) Sequence 43 from Patent WO02081517. 60 1e-07
BC146386_1(BC146386|pid:none) Synthetic construct Homo sapiens c... 60 1e-07
AX817297_1(AX817297|pid:none) Sequence 45 from Patent WO02081517. 60 1e-07
BC155681_1(BC155681|pid:none) Xenopus tropicalis hypothetical pr... 60 1e-07
(Q9DER5) RecName: Full=Teneurin-2; Short=Ten-2; AltName... 60 2e-07
AK122555_1(AK122555|pid:none) Mus musculus mRNA for mKIAA1781 pr... 59 4e-07
(Q80T91) RecName: Full=Multiple epidermal growth factor-like dom... 59 4e-07
AK051642_1(AK051642|pid:none) Mus musculus 12 days embryo spinal... 59 4e-07
AE014296_356(AE014296|pid:none) Drosophila melanogaster chromoso... 59 5e-07
AC103550_20(AC103550|pid:none) Oryza sativa chromosome 3 BAC OSJ... 58 7e-07
AM463622_2(AM463622|pid:none) Vitis vinifera contig VV78X244153.... 57 2e-06
AC116984_134(AC116984|pid:none) Dictyostelium discoideum chromos... 57 2e-06
BC071284_1(BC071284|pid:none) Danio rerio tenascin W, mRNA (cDNA... 57 2e-06
AK098809_1(AK098809|pid:none) Homo sapiens cDNA FLJ25943 fis, cl... 57 2e-06
CR954207_381(CR954207|pid:none) Ostreococcus tauri strain OTTH05... 57 2e-06
(O75095) RecName: Full=Multiple epidermal growth factor-like dom... 55 5e-06
AC116984_63(AC116984|pid:none) Dictyostelium discoideum chromoso... 55 5e-06
AB011539_1(AB011539|pid:none) Homo sapiens mRNA for MEGF6 protei... 55 5e-06
AX250013_1(AX250013|pid:none) Sequence 12 from Patent WO0166747.... 54 1e-05
AK160406_1(AK160406|pid:none) Mus musculus adult male cerebellum... 54 1e-05
BC172353_1(BC172353|pid:none) Synthetic construct Homo sapiens c... 54 1e-05
AC117072_39(AC117072|pid:none) Dictyostelium discoideum chromoso... 54 1e-05
AB052948_1(AB052948|pid:none) Homo sapiens mRNA for SREC-3, comp... 54 1e-05
AB052949_1(AB052949|pid:none) Homo sapiens mRNA for SREC-4, comp... 54 1e-05
AK291810_1(AK291810|pid:none) Homo sapiens cDNA FLJ78719 complet... 54 1e-05
BC154909_1(BC154909|pid:none) Xenopus tropicalis WNT inhibitory ... 54 1e-05
(Q9W7R4) RecName: Full=Teneurin-3; Short=Ten-3; AltName... 54 2e-05
X58531_1(X58531|pid:none) Human LAMA mRNA for laminin A chain, p... 54 2e-05
BX324137_1(BX324137|pid:none) Zebrafish DNA sequence from clone ... 54 2e-05
AK074121_1(AK074121|pid:none) Homo sapiens mRNA for FLJ00193 pro... 53 2e-05
AF154501_1(AF154501|pid:none) Thalassiosira weissflogii sexually... 53 3e-05
(Q6N022) RecName: Full=Teneurin-4; Short=Ten-4; AltName... 52 4e-05
J03641_1(J03641|pid:none) Chicken cytotactin mRNA, partial cds, ... 52 4e-05
AB052950_1(AB052950|pid:none) Homo sapiens mRNA for SREC-5, comp... 52 4e-05
AL645750_3(AL645750|pid:none) Zebrafish DNA sequence from clone ... 52 5e-05
AB001327_1(AB001327|pid:none) Halocynthia roretzi mRNA for HrNot... 52 5e-05
(P25391) RecName: Full=Laminin subunit alpha-1; Short=L... 52 5e-05
AL591496_16(AL591496|pid:none) Mouse DNA sequence from clone RP2... 52 5e-05
AK176188_1(AK176188|pid:none) Arabidopsis thaliana mRNA for majo... 52 5e-05
AC116984_67(AC116984|pid:none) Dictyostelium discoideum chromoso... 52 5e-05
(Q9W6F8) RecName: Full=Wnt inhibitory factor 1; Short=W... 52 5e-05
AL591496_15(AL591496|pid:none) Mouse DNA sequence from clone RP2... 52 5e-05
AL645912_4(AL645912|pid:none) Mouse DNA sequence from clone RP23... 52 7e-05
(Q9WTS5) RecName: Full=Teneurin-2; Short=Ten-2; AltName... 52 7e-05
BC141361_1(BC141361|pid:none) Mus musculus odd Oz/ten-m homolog ... 52 7e-05
AJ437480_3(AJ437480|pid:none) Paramecium tetraurelia partial npe... 52 7e-05
AJ245710_1(AJ245710|pid:none) Mus musculus partial mRNA for tene... 52 7e-05
U00046_2(U00046|pid:none) Caenorhabditis elegans cosmid R13F6, c... 51 9e-05
AX392975_1(AX392975|pid:none) Sequence 17 from Patent WO0214358.... 51 9e-05
AB206835_1(AB206835|pid:none) Caenorhabditis elegans ten-1 mRNA ... 51 9e-05
(P59222) RecName: Full=Scavenger receptor class F member 2; AltN... 51 9e-05
T16743(T16743)hypothetical protein R13F6.4 - Caenorhabditis eleg... 51 9e-05
AF522196_1(AF522196|pid:none) Homo sapiens scavenger receptor ty... 51 9e-05
U00046_1(U00046|pid:none) Caenorhabditis elegans cosmid R13F6, c... 51 9e-05
AC096673_18(AC096673|pid:none) Trypanosoma brucei chromosome 3 c... 51 1e-04
(Q9P273) RecName: Full=Teneurin-3; Short=Ten-3; AltName... 50 1e-04
CR383662_1(CR383662|pid:none) Zebrafish DNA sequence from clone ... 50 1e-04
AF086609_1(AF086609|pid:none) Rattus norvegicus neurestin gamma ... 50 1e-04
AB066348_1(AB066348|pid:none) Crassostrea gigas IBCGH mRNA for i... 50 2e-04
BC146617_1(BC146617|pid:none) Xenopus tropicalis odz, odd Oz/ten... 50 2e-04
AF195418_1(AF195418|pid:none) Mus musculus ODZ3 (Odz3) mRNA, par... 50 3e-04
AC116100_9(AC116100|pid:none) Dictyostelium discoideum chromosom... 50 3e-04
(Q9WTS6) RecName: Full=Teneurin-3; Short=Ten-3; AltName... 50 3e-04
CP000587_387(CP000587|pid:none) Ostreococcus lucimarinus CCE9901... 50 3e-04
AX463772_1(AX463772|pid:none) Sequence 35 from Patent WO0250111. 49 3e-04
(Q9W6V6) RecName: Full=Teneurin-1; Short=Ten-1; AltName... 49 3e-04
(O15230) RecName: Full=Laminin subunit alpha-5; Flags: Precursor; 49 3e-04
AF443072_1(AF443072|pid:none) Homo sapiens laminin alpha5 chain ... 49 3e-04
DQ289584_1(DQ289584|pid:none) Spodoptera frugiperda integrin bet... 49 4e-04
AF074902_1(AF074902|pid:none) Caenorhabditis elegans laminin alp... 49 4e-04
Z81110_2(Z81110|pid:none) Caenorhabditis elegans Cosmid T01D3, c... 49 4e-04
BX537264_1(BX537264|pid:none) Zebrafish DNA sequence from clone ... 49 4e-04
AB052951_1(AB052951|pid:none) Homo sapiens mRNA for SRECRP-1, co... 49 4e-04
F87908(F87908;E87908) protein T22A3.8 [imported] - Caenorhabditi... 49 4e-04
T22945(T22945;T24295)hypothetical protein T01D3.1 - Caenorhabdit... 49 4e-04
AE014296_1167(AE014296|pid:none) Drosophila melanogaster chromos... 49 6e-04
L07288_1(L07288|pid:none) Drosophila melanogaster laminin A (Lam... 49 6e-04
M96388_1(M96388|pid:none) Drosophila melanogaster laminin A chai... 49 6e-04
AB001074_1(AB001074|pid:none) Caenorhabditis elegans mRNA for la... 49 6e-04
Z70286_4(Z70286|pid:none) Caenorhabditis elegans Cosmid K08C7, c... 49 6e-04
BT032866_1(BT032866|pid:none) Drosophila melanogaster SD07123 fu... 49 6e-04
(Q00174) RecName: Full=Laminin subunit alpha; Short=Lam... 49 6e-04
AC115612_9(AC115612|pid:none) Dictyostelium discoideum chromosom... 49 6e-04
(Q21313) RecName: Full=Laminin-like protein epi-1; Flags: Precur... 49 6e-04
AB209873_1(AB209873|pid:none) Homo sapiens mRNA for notch1 prepr... 48 7e-04
(P46531) RecName: Full=Neurogenic locus notch homolog protein 1;... 48 7e-04
AE014296_355(AE014296|pid:none) Drosophila melanogaster chromoso... 48 7e-04
AF145617_1(AF145617|pid:none) Drosophila melanogaster clone GH03... 48 7e-04
(Q9W6F9) RecName: Full=Wnt inhibitory factor 1; Short=W... 48 0.001
AM904781_1(AM904781|pid:none) Ministeria vibrans partial mRNA fo... 48 0.001
AC116924_8(AC116924|pid:none) Dictyostelium discoideum chromosom... 47 0.001
AY286489_1(AY286489|pid:none) Danio rerio tenascin-R mRNA, compl... 47 0.001
AY862413_1(AY862413|pid:none) Danio rerio laminin alpha 1 mRNA, ... 47 0.001
BC091959_1(BC091959|pid:none) Danio rerio wnt inhibitory factor ... 47 0.001
DQ131910_1(DQ131910|pid:none) Danio rerio laminin alpha 1 mRNA, ... 47 0.001
AC115680_4(AC115680|pid:none) Dictyostelium discoideum chromosom... 47 0.001
AF005357_1(AF005357|pid:none) Ophlitaspongia tenuis integrin sub... 47 0.002
AB025413_1(AB025413|pid:none) Mus musculus mRNA for Ten-m4, comp... 47 0.002
CT025750_1(CT025750|pid:none) Zebrafish DNA sequence from clone ... 47 0.002
AB100603_1(AB100603|pid:none) Mus musculus Notch1 gene for trans... 47 0.002
(Q3UHK6) RecName: Full=Teneurin-4; Short=Ten-4; AltName... 47 0.002
AB100603_2(AB100603|pid:none) Mus musculus Notch1 gene for trans... 47 0.002
A35844(A35844)Xotch protein - African clawed frog 47 0.002
(P21783) RecName: Full=Neurogenic locus notch protein homolog; ... 47 0.002
(Q01705) RecName: Full=Neurogenic locus notch homolog protein 1;... 47 0.002
AF508809_1(AF508809|pid:none) Mus musculus notch 1 protein mRNA,... 47 0.002
AK147329_1(AK147329|pid:none) Mus musculus cDNA, RIKEN full-leng... 47 0.002
AE014298_1598(AE014298|pid:none) Drosophila melanogaster chromos... 47 0.002
AE014298_1834(AE014298|pid:none) Drosophila melanogaster chromos... 47 0.002
Y11128_1(Y11128|pid:none) D.melanogaster mRNA for C901 protein. 47 0.002
Y18468_1(Y18468|pid:none) Suberites domuncula mRNA for integrin ... 47 0.002
X68794_1(X68794|pid:none) Drosophila melanogaster mRNA for type ... 47 0.002
AF008227_1(AF008227|pid:none) Drosophila melanogaster odd Oz pro... 47 0.002
AE014296_3877(AE014296|pid:none) Drosophila melanogaster chromos... 47 0.002
A54148(A54148)odz protein - fruit fly (Drosophila sp.) 47 0.002
AE014296_3878(AE014296|pid:none) Drosophila melanogaster chromos... 47 0.002
AY805407_1(AY805407|pid:none) Danio rerio notch1b mRNA, complete... 46 0.003
Y10354_1(Y10354|pid:none) D.rerio notch6 mRNA. 46 0.003
EU675625_1(EU675625|pid:none) Hirudo medicinalis beta-integrin m... 46 0.003
I46059(I46059) beta-1 integrin subunit - bovine (fragment) &U10... 46 0.004
AF151717_1(AF151717|pid:none) Mus musculus putative extracellula... 46 0.004
AM494968_287(AM494968|pid:none) Leishmania braziliensis chromoso... 46 0.004
CP000595_188(CP000595|pid:none) Ostreococcus lucimarinus CCE9901... 46 0.004
(Q2QI47) RecName: Full=Usherin; AltName: Full=Usher syndrome typ... 46 0.004
AE014134_2523(AE014134|pid:none) Drosophila melanogaster chromos... 45 0.005
AC117075_93(AC117075|pid:none) Dictyostelium discoideum chromoso... 45 0.005
FJ222591_1(FJ222591|pid:none) Periplaneta americana Notch protei... 45 0.005
AB032953_1(AB032953|pid:none) Homo sapiens mRNA for KIAA1127 pro... 45 0.005
L42229_1(L42229|pid:none) Xenopus laevis X-Delta-1 gene, complet... 45 0.006
AF308602_1(AF308602|pid:none) Homo sapiens NOTCH 1 (N1) mRNA, co... 45 0.006
(Q6DI48) RecName: Full=Delta-like protein A; Short=Delt... 45 0.006
BC156301_1(BC156301|pid:none) Synthetic construct Mus musculus c... 45 0.006
CU458989_1(CU458989|pid:none) Danio rerio cDNA, clone cssl:d0399. 45 0.006
(Q6IN38) RecName: Full=Wnt inhibitory factor 1; Short=W... 45 0.006
DQ149103_1(DQ149103|pid:none) Danio rerio integrin beta1 subunit... 45 0.006
AF086610_1(AF086610|pid:none) Rattus norvegicus neurestin delta ... 45 0.006
(Q8I7T3) RecName: Full=Substrate-adhesion molecule; Flags: Precu... 45 0.006
BX883044_5(BX883044|pid:none) Rattus norvegicus chromosome 20, m... 45 0.008
S18188(S18188)notch protein homolog - rat 45 0.008
CR954216_234(CR954216|pid:none) Ostreococcus tauri strain OTTH05... 45 0.008
AM494965_257(AM494965|pid:none) Leishmania braziliensis chromoso... 45 0.008
AY862414_1(AY862414|pid:none) Danio rerio laminin alpha 4 mRNA, ... 45 0.008
U57753_1(U57753|pid:none) Strongylocentrotus purpuratus SFE1 mRN... 45 0.008
BC135592_1(BC135592|pid:none) Xenopus tropicalis delta-like 1, m... 45 0.008
(Q9IAT6) RecName: Full=Delta-like protein C; Short=Delt... 45 0.008
BC163717_1(BC163717|pid:none) Danio rerio laminin, alpha 4, mRNA... 45 0.008
(Q9Y5W5) RecName: Full=Wnt inhibitory factor 1; Short=W... 44 0.011
AB031297_1(AB031297|pid:none) Sarcophaga peregrina mRNA for 120-... 44 0.011
(P98157) RecName: Full=Low-density lipoprotein receptor-related ... 44 0.011
FN357317_8(FN357317|pid:none) Schistosoma mansoni genome sequenc... 44 0.011
AB173680_1(AB173680|pid:none) Macaca fascicularis brain cDNA clo... 44 0.011
AK301818_1(AK301818|pid:none) Homo sapiens cDNA FLJ54458 complet... 44 0.011
BC018037_1(BC018037|pid:none) Homo sapiens WNT inhibitory factor... 44 0.011
AJ566620_1(AJ566620|pid:none) Paramecium tetraurelia macronuclea... 44 0.011
(Q1LVF0) RecName: Full=Laminin subunit gamma-1; Flags: Precursor... 44 0.014
(Q14622) RecName: Full=Integrin beta-1; AltName: Full=Fibronecti... 44 0.014
AF468048_1(AF468048|pid:none) Danio rerio laminin gamma 1 (lamc1... 44 0.014
AF371960_23(AF371960|pid:none) Infectious spleen and kidney necr... 44 0.014
(Q9GLP0) RecName: Full=Integrin beta-1; AltName: Full=Fibronecti... 44 0.014
BT011327_1(BT011327|pid:none) Drosophila melanogaster SD22390 fu... 44 0.014
BC068426_1(BC068426|pid:none) Danio rerio laminin, gamma 1, mRNA... 44 0.014
B27079(B27079) fibronectin receptor beta chain precursor - human... 44 0.014
BX537407_1(BX537407|pid:none) Homo sapiens mRNA; cDNA DKFZp686D0... 44 0.014
BC084071_1(BC084071|pid:none) Xenopus laevis hypothetical LOC494... 44 0.018
AF091889_1(AF091889|pid:none) Homo sapiens Usher syndrome type I... 44 0.018
A49175(A49175;PH1570;S32113) Motch B protein - mouse (fragment) ... 44 0.018
EF619494_1(EF619494|pid:none) Cervus elaphus notch-related Wnt i... 44 0.018
BC172642_1(BC172642|pid:none) Synthetic construct Mus musculus c... 44 0.018
AB095016_1(AB095016|pid:none) Cynops pyrrhogaster Notch-1 mRNA f... 44 0.018
AM418386_1(AM418386|pid:none) Oncorhynchus mykiss mRNA for CD18 ... 44 0.018
A59180(A59180) Wnt inhibitory factor-1 - human &AF122922_1(AF12... 44 0.018
AB266841_1(AB266841|pid:none) Equus caballus itgb1 mRNA for beta... 43 0.023
(B0FYY4) RecName: Full=Integrin beta-1; AltName: Full=Integrin s... 43 0.023
AL596139_3(AL596139|pid:none) BAC A of library A from Tetraodon ... 43 0.023
AY327116_1(AY327116|pid:none) Homo sapiens laminin alpha 3 splic... 43 0.023
(P02468) RecName: Full=Laminin subunit gamma-1; AltName: Full=La... 43 0.023
M95811_1(M95811|pid:none) Drosophila melanogaster laminin B1 cha... 43 0.023
BC165945_1(BC165945|pid:none) Synthetic construct Mus musculus c... 43 0.023
(Q16787) RecName: Full=Laminin subunit alpha-3; AltName: Full=Ep... 43 0.023
AE014297_4237(AE014297|pid:none) Drosophila melanogaster chromos... 43 0.023
MMFFB1(A28783;S14462;B28783)laminin beta-1 chain precursor - fru... 43 0.023
BC114107_1(BC114107|pid:none) Bos taurus integrin beta 1, mRNA (... 43 0.023
AB210365_1(AB210365|pid:none) Ciona intestinalis mRNA for delta ... 43 0.023
EF444992_1(EF444992|pid:none) Homo sapiens laminin alpha-3 chain... 43 0.023
BT015222_1(BT015222|pid:none) Drosophila melanogaster RE35801 fu... 43 0.023
M19525_1(M19525|pid:none) D.melanogaster laminin B1 subunit mRNA... 43 0.023
M33753_1(M33753|pid:none) D.melanogaster crumbs protein mRNA, co... 43 0.031
AB154832_1(AB154832|pid:none) Halocynthia roretzi HrITGB2 mRNA f... 43 0.031
BC004048_1(BC004048|pid:none) Mus musculus Wnt inhibitory factor... 43 0.031
AB120427_1(AB120427|pid:none) Branchiostoma belcheri Bb2C mRNA f... 43 0.031
AB095017_1(AB095017|pid:none) Cynops pyrrhogaster Delta-1 mRNA f... 43 0.031
AX045123_1(AX045123|pid:none) Sequence 31 from Patent WO0066730.... 43 0.031
(P10040) RecName: Full=Protein crumbs; AltName: Full=95F; Flags:... 43 0.031
CP000592_153(CP000592|pid:none) Ostreococcus lucimarinus CCE9901... 43 0.031
AX045121_1(AX045121|pid:none) Sequence 29 from Patent WO0066730.... 43 0.031
(Q9QYP2) RecName: Full=Cadherin EGF LAG seven-pass G-type recept... 42 0.040
(Q8K3K1) RecName: Full=Usherin; AltName: Full=Usher syndrome typ... 42 0.040
AB470974_1(AB470974|pid:none) Ochromonas danica Ocm4 mRNA for tu... 42 0.040
BC135385_1(BC135385|pid:none) Xenopus tropicalis hypothetical pr... 42 0.040
AL807754_1(AL807754|pid:none) Zebrafish DNA sequence from clone ... 42 0.040
(P46530) RecName: Full=Neurogenic locus notch homolog protein 1;... 42 0.052
BT072644_1(BT072644|pid:none) Salmo salar clone ssal-rgf-534-220... 42 0.052
(A0JP86) RecName: Full=Laminin subunit gamma-1; Flags: Precursor... 42 0.052
(Q04721) RecName: Full=Neurogenic locus notch homolog protein 2;... 42 0.052
AF308601_1(AF308601|pid:none) Homo sapiens NOTCH 2 (N2) mRNA, co... 42 0.052
AX357059_1(AX357059|pid:none) Sequence 21 from Patent EP1175909.... 42 0.052
AL645789_1(AL645789|pid:none) Zebrafish DNA sequence from clone ... 42 0.052
AE013599_4225(AE013599|pid:none) Drosophila melanogaster chromos... 42 0.068
AF499438_1(AF499438|pid:none) Caenorhabditis briggsae notch-like... 42 0.068
AE014134_2530(AE014134|pid:none) Drosophila melanogaster chromos... 42 0.068
AM502243_132(AM502243|pid:none) Leishmania infantum chromosome 25. 42 0.068
AY390351_1(AY390351|pid:none) Gallus gallus Schwann cell-specifi... 42 0.068
CT005268_255(CT005268|pid:none) Leishmania major strain Friedlin... 42 0.068
BC044262_1(BC044262|pid:none) Xenopus laevis similar to delta-li... 42 0.068
CP001131_2828(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 42 0.068
AJ005083_1(AJ005083|pid:none) Tribolium castaneum notch gene, pa... 42 0.068
CP001327_152(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 42 0.068
A55677(A55677)laminin beta-2 chain precursor (version 1) - human 42 0.068
U70843_1(U70843|pid:none) Xenopus laevis Notch ligand X-Delta-2 ... 42 0.068
CU459119_1(CU459119|pid:none) Zebrafish DNA sequence from clone ... 42 0.068
AF463419_1(AF463419|pid:none) Naegleria gruberi basal body prote... 42 0.068
CT005268_256(CT005268|pid:none) Leishmania major strain Friedlin... 42 0.068
X79683_1(X79683|pid:none) H.sapiens LAMB2 mRNA for beta2 laminin. 42 0.068
AE014134_1453(AE014134|pid:none) Drosophila melanogaster chromos... 42 0.068
AB220440_1(AB220440|pid:none) Macaca fascicularis mRNA, clone Qc... 42 0.068
AM746676_988(AM746676|pid:none) Sorangium cellulosum 'So ce 56' ... 42 0.068
AY118509_1(AY118509|pid:none) Drosophila melanogaster LD13435 fu... 42 0.068
M31039_1(M31039|pid:none) Mus musculus complement receptor 3 bet... 42 0.068
AF005356_1(AF005356|pid:none) Acropora millepora integrin subuni... 42 0.068
FN357387_32(FN357387|pid:none) Schistosoma mansoni genome sequen... 41 0.089
AC116957_18(AC116957|pid:none) Dictyostelium discoideum chromoso... 41 0.089
Y12539_1(Y12539|pid:none) Branchiostoma floridae mRNA for putati... 41 0.089
AF369477_1(AF369477|pid:none) Mus musculus strain 129P3/J lipopr... 41 0.089
(Q6ECI6) RecName: Full=Integrin beta-2; AltName: Full=Cell surfa... 41 0.089
(Q9NR61) RecName: Full=Delta-like protein 4; AltName: Full=Droso... 41 0.089
(Q9W7R3) RecName: Full=Teneurin-4; Short=Ten-4; AltName... 41 0.089
(Q9HCU4) RecName: Full=Cadherin EGF LAG seven-pass G-type recept... 41 0.089
(Q91ZX7) RecName: Full=Prolow-density lipoprotein receptor-relat... 41 0.089
(P07228) RecName: Full=Integrin beta-1; AltName: Full=CSAT antig... 41 0.089
Z12172_1(Z12172|pid:none) H.sapiens dlk mRNA for putative homeot... 41 0.089
S25111(S25111;S32554) alpha-2-macroglobulin receptor precursor -... 41 0.089
BC167592_1(BC167592|pid:none) Xenopus tropicalis hypothetical pr... 41 0.12
AK302554_1(AK302554|pid:none) Homo sapiens cDNA FLJ51576 complet... 41 0.12
AF060203_1(AF060203|pid:none) Biomphalaria glabrata beta integri... 41 0.12
(Q5VI41) RecName: Full=Integrin beta-2; AltName: Full=Cell surfa... 41 0.12
(P78504) RecName: Full=Protein jagged-1; Short=Jagged1;... 41 0.12
A56136(A56136)jagged protein precursor - rat 41 0.12
AB043893_1(AB043893|pid:none) Mus musculus dll-4 mRNA for Delta-... 41 0.12
(P49134) RecName: Full=Integrin beta-1; AltName: Full=Fibronecti... 41 0.12
AK312722_1(AK312722|pid:none) Homo sapiens cDNA, FLJ93126, highl... 41 0.12
AK147313_1(AK147313|pid:none) Mus musculus cDNA, RIKEN full-leng... 41 0.12
BC150809_1(BC150809|pid:none) Mus musculus laminin B1 subunit 1,... 41 0.12
BC026018_1(BC026018|pid:none) Homo sapiens laminin, beta 1, mRNA... 41 0.12
X15202_1(X15202|pid:none) Mouse mRNA for fibronectin receptor be... 41 0.12
M15525_1(M15525|pid:none) Mouse laminin B1 mRNA, complete cds. 41 0.12
(P02469) RecName: Full=Laminin subunit beta-1; Short=La... 41 0.12
(P09055) RecName: Full=Integrin beta-1; AltName: Full=Fibronecti... 41 0.12
AK088729_1(AK088729|pid:none) Mus musculus 2 days neonate thymus... 41 0.12
BC032276_1(BC032276|pid:none) Mus musculus laminin B1 subunit 1,... 41 0.12
L33861_1(L33861|pid:none) Sea urchin fibropellin Ia mRNA, 3' end. 41 0.12
AK159689_1(AK159689|pid:none) Mus musculus osteoclast-like cell ... 41 0.12
U61276_1(U61276|pid:none) Human transmembrane protein Jagged 1 (... 41 0.12
U77493_1(U77493|pid:none) Human Notch2 mRNA, partial cds. 41 0.12
BC098393_1(BC098393|pid:none) Homo sapiens jagged 1 (Alagille sy... 41 0.12
AB028498_1(AB028498|pid:none) Drosophila melanogaster mRNA for F... 41 0.12
BC113455_1(BC113455|pid:none) Homo sapiens laminin, beta 1, mRNA... 41 0.12
Z68155_1(Z68155|pid:none) Homo sapiens LAMB2 gene for laminin be... 41 0.12
AX045111_1(AX045111|pid:none) Sequence 19 from Patent WO0066730.... 41 0.12
(Q9QXX0) RecName: Full=Protein jagged-1; Short=Jagged1;... 41 0.12
AY237588_1(AY237588|pid:none) Pseudoplusia includens integrin be... 40 0.15
CP001324_318(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 40 0.15
(Q07954) RecName: Full=Prolow-density lipoprotein receptor-relat... 40 0.15
AL929049_5(AL929049|pid:none) Zebrafish DNA sequence from clone ... 40 0.15
AB209498_1(AB209498|pid:none) Homo sapiens mRNA for low density ... 40 0.15
(P80370) RecName: Full=Protein delta homolog 1; Short=D... 40 0.15
AL035436_2(AL035436|pid:none) Drosophila melanogaster cosmid clo... 40 0.15
(Q9WTS4) RecName: Full=Teneurin-1; Short=Ten-1; AltName... 40 0.15
M16152_1(M16152|pid:none) Drosophila melanogaster Notch growth f... 40 0.15
CP000251_2747(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 40 0.15
BC117624_1(BC117624|pid:none) Danio rerio delta-like 4 (Drosophi... 40 0.15
AE014134_308(AE014134|pid:none) Drosophila melanogaster chromoso... 40 0.20
BC088400_1(BC088400|pid:none) Rattus norvegicus laminin, beta 2,... 40 0.20
CS572819_1(CS572819|pid:none) Sequence 333 from Patent WO2006054... 40 0.20
(P07942) RecName: Full=Laminin subunit beta-1; Short=La... 40 0.20
M25063_1(M25063|pid:none) Drosophila mRNA for laminin B2 chain. ... 40 0.20
CS572813_1(CS572813|pid:none) Sequence 327 from Patent WO2006054... 40 0.20
AF373841_1(AF373841|pid:none) Gallus gallus laminin gamma 1 mRNA... 40 0.20
DQ167758_1(DQ167758|pid:none) Drosophila yakuba putative Laminin... 40 0.20
AE014134_309(AE014134|pid:none) Drosophila melanogaster chromoso... 40 0.20
CS572805_1(CS572805|pid:none) Sequence 319 from Patent WO2006054... 40 0.20
(P15800) RecName: Full=Laminin subunit beta-2; AltName: Full=S-l... 40 0.20
AC004663_1(AC004663|pid:none) Homo sapiens chromosome 19, cosmid... 40 0.20
AB209447_1(AB209447|pid:none) Homo sapiens mRNA for Notch homolo... 40 0.20
(Q61789) RecName: Full=Laminin subunit alpha-3; AltName: Full=Ni... 40 0.20
AL671899_10(AL671899|pid:none) Mouse DNA sequence from clone RP2... 40 0.20
U88353_1(U88353|pid:none) Mus musculus laminin alpha 3B chain (L... 40 0.20
DQ167755_1(DQ167755|pid:none) Drosophila orena putative Laminin ... 40 0.20
(P15215) RecName: Full=Laminin subunit gamma-1; AltName: Full=La... 40 0.20
AM502249_272(AM502249|pid:none) Leishmania infantum chromosome 31. 40 0.26
AX045119_1(AX045119|pid:none) Sequence 27 from Patent WO0066730. 40 0.26
AK297918_1(AK297918|pid:none) Homo sapiens cDNA FLJ57405 complet... 40 0.26
BC013197_1(BC013197|pid:none) Homo sapiens delta-like 1 homolog ... 40 0.26
AX045117_1(AX045117|pid:none) Sequence 25 from Patent WO0066730. 40 0.26
AB077987_1(AB077987|pid:none) Halocynthia roretzi mRNA for HrDel... 40 0.26
AF315556_1(AF315556|pid:none) Caenorhabditis remanei notch-like ... 40 0.26
BC124250_1(BC124250|pid:none) Danio rerio zgc:153112, mRNA (cDNA... 40 0.26
AB385108_1(AB385108|pid:none) Synthetic construct DNA, clone: pF... 40 0.26
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor; 40 0.26
(P41951) RecName: Full=Prion-like-(Q/N-rich) domain-bearing prot... 40 0.26
AX112197_1(AX112197|pid:none) Sequence 1 from Patent WO0127289. ... 40 0.26
(Q9JI71) RecName: Full=Delta-like protein 4; AltName: Full=Droso... 40 0.26
BC007741_1(BC007741|pid:none) Homo sapiens delta-like 1 homolog ... 40 0.26
AM502249_273(AM502249|pid:none) Leishmania infantum chromosome 31. 40 0.26
AF224337_1(AF224337|pid:none) Ictalurus punctatus beta-1 integri... 40 0.26
AK289384_1(AK289384|pid:none) Homo sapiens cDNA FLJ78166 complet... 40 0.26
AE014134_2528(AE014134|pid:none) Drosophila melanogaster chromos... 40 0.26
U66796_1(U66796|pid:none) Human laminin alpha 2 chain (LAMA2) ge... 39 0.34
AX045097_1(AX045097|pid:none) Sequence 5 from Patent WO0066730. ... 39 0.34
DQ017081_1(DQ017081|pid:none) Homo sapiens secredeltin (DLK1) mR... 39 0.34
AE014134_1265(AE014134|pid:none) Drosophila melanogaster chromos... 39 0.34
EU623794_1(EU623794|pid:none) Odocoileus hemionus CD18 (CD18) mR... 39 0.34
(Q61292) RecName: Full=Laminin subunit beta-2; AltName: Full=S-l... 39 0.34
EU553918_1(EU553918|pid:none) Cervus elaphus canadensis CD18 (CD... 39 0.34
(P24043) RecName: Full=Laminin subunit alpha-2; AltName: Full=La... 39 0.34
AJ291489_1(AJ291489|pid:none) Paracentrotus lividus mRNA for fib... 39 0.34
AF239608_1(AF239608|pid:none) Drosophila melanogaster SP1070 mRN... 39 0.34
DQ917570_1(DQ917570|pid:none) Parhyale hawaiensis delta protein ... 39 0.34
AX045099_1(AX045099|pid:none) Sequence 7 from Patent WO0066730. 39 0.34
C37057(C37057)fibronectin receptor beta chain - guinea pig (frag... 39 0.34
(Q01MB6) RecName: Full=Lectin; AltName: Full=Agglutinin; Contain... 39 0.44
AL662990_8(AL662990|pid:none) Oryza sativa genomic DNA, chromoso... 39 0.44
(P10079) RecName: Full=Fibropellin-1; AltName: Full=Fibropellin-... 39 0.44
M17421_1(M17421|pid:none) Strongylocentrotus purpuratus putative... 39 0.44
DQ900934_1(DQ900934|pid:none) Ciona intestinalis gamma-carboxygl... 39 0.44
L08692_2(L08692|pid:none) Strongylocentrotus purpuratus fibropel... 39 0.44
(Q3UV74) RecName: Full=Integrin beta-2-like protein; AltName: Fu... 39 0.44
AB011105_1(AB011105|pid:none) Homo sapiens mRNA for KIAA0533 pro... 39 0.44
BC026051_1(BC026051|pid:none) Mus musculus laminin, beta 2, mRNA... 39 0.44
(O88278) RecName: Full=Cadherin EGF LAG seven-pass G-type recept... 39 0.44
(Q0JF21) RecName: Full=Lectin; AltName: Full=Agglutinin; Contain... 39 0.44
CR855052_1(CR855052|pid:none) Oryza sativa genomic DNA, chromoso... 39 0.44
AF140681_1(AF140681|pid:none) Oryza sativa subsp. indica lectin ... 39 0.44
FM209056_1(FM209056|pid:none) Homo sapiens mRNA for Eyes shut ho... 39 0.58
(O00548) RecName: Full=Delta-like protein 1; AltName: Full=Droso... 39 0.58
DQ917572_1(DQ917572|pid:none) Parhyale hawaiensis notch protein ... 39 0.58
BC122579_1(BC122579|pid:none) Bos taurus TEK tyrosine kinase, en... 39 0.58
A53612(A53612) laminin B1k chain precursor - human &AX045549_1(... 39 0.58
AF196571_1(AF196571|pid:none) Homo sapiens Delta-like-1 protein ... 39 0.58
AF003522_1(AF003522|pid:none) Homo sapiens Delta mRNA, complete ... 39 0.58
AF051367_1(AF051367|pid:none) Mus musculus pactolus mRNA, comple... 39 0.58
(Q06807) RecName: Full=Angiopoietin-1 receptor; EC=2.7.... 39 0.58
(P34710) RecName: Full=Netrin unc-6; AltName: Full=Uncoordinated... 39 0.58
AF315555_1(AF315555|pid:none) Caenorhabditis briggsae notch-like... 39 0.58
BC113142_1(BC113142|pid:none) Mus musculus integrin beta 2-like,... 39 0.58
(Q25092) RecName: Full=Laminin subunit B; Flags: Fragment; &U34... 39 0.58
AX045557_1(AX045557|pid:none) Sequence 21 from Patent WO0066731. 38 0.75
(P12606) RecName: Full=Integrin beta-1-A; Flags: Precursor; &A2... 38 0.75
BC140783_1(BC140783|pid:none) Homo sapiens odz, odd Oz/ten-m hom... 38 0.75
AK290785_1(AK290785|pid:none) Homo sapiens cDNA FLJ77085 complet... 38 0.75
AF100772_1(AF100772|pid:none) Homo sapiens tenascin-M1 (TNM1) mR... 38 0.75
AK140251_1(AK140251|pid:none) Mus musculus adult male corpora qu... 38 0.75
BC151354_1(BC151354|pid:none) Bos taurus latent transforming gro... 38 0.75
U58746_6(U58746|pid:none) Caenorhabditis elegans cosmid R05G6, c... 38 0.75
AF181965_1(AF181965|pid:none) Canis familiaris B-2 integrin (ITG... 38 0.75
BC144543_1(BC144543|pid:none) Homo sapiens odz, odd Oz/ten-m hom... 38 0.75
I50719(I50719) C-Delta-1 - chicken &U26590_1(U26590|pid:none) 38 0.75
D37766_1(D37766|pid:none) Homo sapiens mRNA for Laminin-5 beta3 ... 38 0.75
AK296851_1(AK296851|pid:none) Homo sapiens cDNA FLJ61309 complet... 38 0.75
CR382331_1(CR382331|pid:none) Zebrafish DNA sequence from clone ... 38 0.75
(O57409) RecName: Full=Delta-like protein B; Short=Delt... 38 0.75
EU434914_1(EU434914|pid:none) Mus musculus isolate MAB1001_9C_10... 38 0.75
BX897725_5(BX897725|pid:none) Zebrafish DNA sequence from clone ... 38 0.75
T29359(T29359)hypothetical protein R05G6.9 - Caenorhabditis eleg... 38 0.75
(Q9NYQ6) RecName: Full=Cadherin EGF LAG seven-pass G-type recept... 38 0.75
EU434916_1(EU434916|pid:none) Mus musculus isolate MAB1001_11F_6... 38 0.75
S32659(I50660;S32659) integrin beta 2 chain (CD18) - chicken &X... 38 0.75
(Q60675) RecName: Full=Laminin subunit alpha-2; AltName: Full=La... 38 0.75
AX045553_1(AX045553|pid:none) Sequence 17 from Patent WO0066731. 38 0.75
(Q09163) RecName: Full=Protein delta homolog 1; Short=D... 38 0.75
BC172647_1(BC172647|pid:none) Synthetic construct Mus musculus c... 38 0.75
L12721_1(L12721|pid:none) Mus musculus adipocyte differentiation... 38 0.75
AF308652_1(AF308652|pid:none) Podocoryne carnea integrin beta ch... 38 0.98
AY265358_1(AY265358|pid:none) Homo sapiens glycoprotein receptor... 38 0.98
BC098806_1(BC098806|pid:none) Rattus norvegicus integrin, beta 7... 38 0.98
EU716327_1(EU716327|pid:none) Danio rerio NtA agrin mRNA, comple... 38 0.98
BC163266_1(BC163266|pid:none) Danio rerio integrin beta 3a, mRNA... 38 0.98
D90272_1(D90272|pid:none) Tachypleus tridentatus mRNA for limulu... 38 0.98
AK129157_1(AK129157|pid:none) Mus musculus premature mRNA for mK... 38 0.98
AE014134_2561(AE014134|pid:none) Drosophila melanogaster chromos... 38 0.98
EU716326_1(EU716326|pid:none) Danio rerio transmembrane agrin mR... 38 0.98
BX927239_21(BX927239|pid:none) Human DNA sequence from clone DAM... 38 0.98
(P28175) RecName: Full=Limulus clotting factor C; Short... 38 0.98
(P49013) RecName: Full=Fibropellin-3; AltName: Full=Fibropellin ... 38 0.98
(Q5M9B3) RecName: Full=Integrin beta-like protein 1; Flags: Prec... 38 0.98
CR933878_21(CR933878|pid:none) Human DNA sequence from clone DAM... 38 0.98
AY818356_1(AY818356|pid:none) Pinctada fucata astacin-like prote... 38 0.98
AC007556_2(AC007556|pid:none) Homo sapiens BAC clone RP11-18C9 f... 38 0.98
DQ178647_1(DQ178647|pid:none) Danio rerio integrin beta 3.2 (itg... 38 0.98
(P98164) RecName: Full=Low-density lipoprotein receptor-related ... 38 0.98
FN357418_8(FN357418|pid:none) Schistosoma mansoni genome sequenc... 38 0.98
AY265357_1(AY265357|pid:none) Homo sapiens glycoprotein receptor... 38 0.98
AL662830_12(AL662830|pid:none) Human DNA sequence from clone XXb... 38 0.98
BC046744_1(BC046744|pid:none) Xenopus laevis Integrin beta-like ... 38 0.98
AF135118_1(AF135118|pid:none) Drosophila melanogaster laminin al... 38 0.98
(O00468) RecName: Full=Agrin; Flags: Precursor; &AB191264_1(AB1... 37 1.3
AF016903_1(AF016903|pid:none) Homo sapiens agrin precursor mRNA,... 37 1.3
BC156248_1(BC156248|pid:none) Synthetic construct Homo sapiens c... 37 1.3
AF491458_1(AF491458|pid:none) Caenorhabditis briggsae strain PB8... 37 1.3
EU441156_1(EU441156|pid:none) Patiria miniata delta protein mRNA... 37 1.3
AB174356_1(AB174356|pid:none) Macaca fascicularis brain cDNA clo... 37 1.3
AY314773_1(AY314773|pid:none) Caenorhabditis elegans flamingo-li... 37 1.3
AF491459_1(AF491459|pid:none) Caenorhabditis briggsae strain HK1... 37 1.3
AY051898_1(AY051898|pid:none) Drosophila melanogaster LD38671 fu... 37 1.3
AF491460_1(AF491460|pid:none) Caenorhabditis briggsae strain AF1... 37 1.3
BT050540_1(BT050540|pid:none) Drosophila melanogaster LD14047 fu... 37 1.3
(Q9R0M0) RecName: Full=Cadherin EGF LAG seven-pass G-type recept... 37 1.3
AF491463_1(AF491463|pid:none) Caenorhabditis briggsae strain VT8... 37 1.3
X55077_1(X55077|pid:none) H.sapiens mRNA fragment for alpha-2 ma... 37 1.3
AF467804_1(AF467804|pid:none) Tachypleus tridentatus factor C pr... 37 1.3
BC084578_1(BC084578|pid:none) Homo sapiens agrin, mRNA (cDNA clo... 37 1.3
AB028499_1(AB028499|pid:none) Mus musculus mRNA for Flamingo 1, ... 37 1.3
(Q9H1U4) RecName: Full=Multiple epidermal growth factor-like dom... 37 1.3
AK021586_1(AK021586|pid:none) Homo sapiens cDNA FLJ11524 fis, cl... 37 1.3
AE013599_2241(AE013599|pid:none) Drosophila melanogaster chromos... 37 1.7
U50143_1(U50143|pid:none) Caenorhabditis elegans apx-1 related (... 37 1.7
EU760971_1(EU760971|pid:none) Meleagris gallopavo delta-like pro... 37 1.7
(P24014) RecName: Full=Protein slit; Short=dSlit; Conta... 37 1.7
>AC116963_42(AC116963|pid:none) Dictyostelium discoideum chromosome 2
map 4657875-4914984 strain AX4, complete sequence.
Length = 1501
Score = 171 bits (433), Expect = 6e-41
Identities = 115/319 (36%), Positives = 159/319 (49%), Gaps = 15/319 (4%)
Frame = +1
Query: 385 GVCSCNTDYYESDCSKKRCPTGSNGFECSGNTNGRCDS------------ESGECEC-NS 525
GVC+C++DY DCS + PT S+ S G + E+G N
Sbjct: 1194 GVCTCSSDYSGFDCSSLKPPTTSSSSTTSTTIGGETKNQEIPVSKTEVNVETGAASISNQ 1253
Query: 526 DRQGIDCGTGFRQCPIYQDQLCNGKSCNNQTGICSCDPGVTXXXXXXXXXXXAGLNLPLD 705
D+ I + + Q+ +N T I + AG+NL +D
Sbjct: 1254 DKWDITIDPSTKYIYQFSQQI---DQFSNITLI------IEEIVNSSKKYTFAGMNLEID 1304
Query: 706 KDGIEIVVNITNYQFLSGLNTLQLRFNSFANEIVIKXXXXXXXXXXXXTINYDNGCNERE 885
+ G++I V+I NYQ+ S LNTLQLRF S A E DN CN+ E
Sbjct: 1305 QGGLKISVSIKNYQYESALNTLQLRFLSSAGET------------SNLDSEEDNSCNQHE 1352
Query: 886 AEIDTKNIDPSKTLNYISIKKNSKVLFGRFINIAISDSRQTFITSEIIEENTNSSAITIG 1065
+E DT NIDP+ TLNYISI KNSK+L GRFIN +SD R TF++SEI+++ ++SS I +G
Sbjct: 1353 SESDTSNIDPNLTLNYISISKNSKILSGRFINKVVSDGRSTFMSSEIVKDLSSSSTIVVG 1412
Query: 1066 INLPHCVDSCFIDPQFT--LSPDYSTYKFSCXXXXXXXXXXXXXXXXXXXXXXXASVALY 1239
+NLPHC + CFIDP F+ +SP++ + SC S+
Sbjct: 1413 LNLPHCSNECFIDPDFSVLVSPNFES---SC--GNSETKKNWVIPVAVVVPVVCVSLLTL 1467
Query: 1240 FGIRYYKKNRYSIRLYTRK 1296
I Y+K+RYSIRL+T K
Sbjct: 1468 GAILIYRKHRYSIRLFTMK 1486
Score = 100 bits (249), Expect = 1e-19
Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Frame = +1
Query: 190 SDCSKKHCPVGANGFECSGYLNGICNDN-GECSCIPPYYEKDC--GYILCPIXXXXXXXX 360
SDCS CPV +CSG+ G C+ G+C+C + C ILCP
Sbjct: 837 SDCSGIACPVS----DCSGH--GYCDTTIGQCNCDSSHQGAGCEMDLILCPTSNKATCSG 890
Query: 361 XXXXXXXTGVCSCNTDYYESDCSKKRCPTGSNGFECSGNTNGRCDSESGECECNSDRQGI 540
TG+C+C+ + SDCS CP +CSG+ G CD+ G+C C+S QG
Sbjct: 891 WGTCNYQTGICTCDANRVGSDCSGISCPVS----DCSGH--GYCDTTVGQCNCDSSHQGA 944
Query: 541 DCGTGFRQCPIYQDQLCNG-KSCNNQTGICSCDPG 642
C CP +C+G +CNNQTG C+CD G
Sbjct: 945 GCEMDLVSCPTSNKAICSGWGTCNNQTGSCTCDIG 979
Score = 97.8 bits (242), Expect = 8e-19
Identities = 52/153 (33%), Positives = 77/153 (50%), Gaps = 4/153 (2%)
Frame = +1
Query: 190 SDCSKKHCPVGANGFECSGYLNGICNDN-GECSCIPPYYEKDC--GYILCPIXXXXXXXX 360
+DCS+ CP+ +CS + G C+ + G+C+C + C + CP
Sbjct: 691 NDCSETACPIS----DCSDH--GYCDTSIGKCNCDSSHQGAGCEMDLVSCPTSNKAICSG 744
Query: 361 XXXXXXXTGVCSCNTDYYESDCSKKRCPTGSNGFECSGNTNGRCDSESGECECNSDRQGI 540
TG+C+C+ + SDCS CP + C+GN G CD+ G+C C+ QG
Sbjct: 745 WGTCNNQTGICTCDANRVGSDCSGISCPVPN----CNGN--GNCDTTVGQCSCDPSHQGA 798
Query: 541 DCGTGFRQCPIYQDQLCNG-KSCNNQTGICSCD 636
+C F CP +C+G +CNNQTGIC+CD
Sbjct: 799 NCEMNFVSCPTPNRSVCSGWGTCNNQTGICTCD 831
Score = 95.1 bits (235), Expect = 5e-18
Identities = 56/157 (35%), Positives = 74/157 (47%), Gaps = 4/157 (2%)
Frame = +1
Query: 190 SDCSKKHCPVGANGFECSGYLNGICNDN-GECSCIPPYYEKDC--GYILCPIXXXXXXXX 360
SDCS CPV +CSG+ G C+ G+C+C + C + CP
Sbjct: 910 SDCSGISCPVS----DCSGH--GYCDTTVGQCNCDSSHQGAGCEMDLVSCPTSNKAICSG 963
Query: 361 XXXXXXXTGVCSCNTDYYESDCSKKRCPTGSNGFECSGNTNGRCDSESGECECNSDRQGI 540
TG C+C+ +DCS RC + NG +G CD+ G+C C+S QG
Sbjct: 964 WGTCNNQTGSCTCDIGRVGADCSGIRCQSDCNG-------HGICDTTIGKCNCDSSHQGE 1016
Query: 541 DCGTGFRQCPIYQDQLCNG-KSCNNQTGICSCDPGVT 648
C CP + C+G SCNNQTGICSC+ G T
Sbjct: 1017 SCELNLITCPSKNNIECSGLGSCNNQTGICSCNDGTT 1053
Score = 85.5 bits (210), Expect = 4e-15
Identities = 50/140 (35%), Positives = 66/140 (47%), Gaps = 7/140 (5%)
Frame = +1
Query: 238 CSGYLNGIC-NDNGECSCIPPYYEKDCGYI----LCPIXXXXXXXXXXXXXXX-TGVCSC 399
CS + G+C + G C C Y DC I +CP TGVC+C
Sbjct: 627 CSNH--GLCISRTGSCDCYEGYGGIDCSSIVVSLICPSNDSSLICSGFGICDKKTGVCAC 684
Query: 400 NTDYYESDCSKKRCPTGSNGFECSGNTNGRCDSESGECECNSDRQGIDCGTGFRQCPIYQ 579
T +DCS+ CP +CS +G CD+ G+C C+S QG C CP
Sbjct: 685 GTGRTGNDCSETACPIS----DCS--DHGYCDTSIGKCNCDSSHQGAGCEMDLVSCPTSN 738
Query: 580 DQLCNG-KSCNNQTGICSCD 636
+C+G +CNNQTGIC+CD
Sbjct: 739 KAICSGWGTCNNQTGICTCD 758
Score = 72.8 bits (177), Expect = 3e-11
Identities = 50/147 (34%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
Frame = +1
Query: 211 CPVGANGFECSGYLNGICNDN-GECSCIPPYYEKDCGYILCPIXXXXXXXXXXXXXXXTG 387
CP + CSG+ GIC+ G C+C DC CPI G
Sbjct: 660 CPSNDSSLICSGF--GICDKKTGVCACGTGRTGNDCSETACPISDCSDHGYCDTSI---G 714
Query: 388 VCSCNTDYYESDCSKK--RCPTGSNGFECSGNTNGRCDSESGECECNSDRQGIDCGTGFR 561
C+C++ + + C CPT SN CSG G C++++G C C+++R G DC +G
Sbjct: 715 KCNCDSSHQGAGCEMDLVSCPT-SNKAICSGW--GTCNNQTGICTCDANRVGSDC-SGI- 769
Query: 562 QCPIYQDQLCNGK-SCNNQTGICSCDP 639
CP+ CNG +C+ G CSCDP
Sbjct: 770 SCPVPN---CNGNGNCDTTVGQCSCDP 793
Score = 65.9 bits (159), Expect = 3e-09
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 38/180 (21%)
Frame = +1
Query: 211 CPVGANGFECSGYLNGICNDN-GECSCIPPYYEKDCGYILCPIXXXXXXXXXXXXXXXTG 387
CP +N CSG+ G CN+ G C+C DC I CP+ G
Sbjct: 734 CPT-SNKAICSGW--GTCNNQTGICTCDANRVGSDCSGISCPVPNCNGNGNCDTT---VG 787
Query: 388 VCSCNTDYYESDCSKK--RCPTGSNGFECSGNTNGRCDSESGECECNSDRQGIDC----- 546
CSC+ + ++C CPT N CSG G C++++G C C+++R G DC
Sbjct: 788 QCSCDPSHQGANCEMNFVSCPT-PNRSVCSGW--GTCNNQTGICTCDANRVGSDCSGIAC 844
Query: 547 ------GTGFRQ-----------------------CPIYQDQLCNG-KSCNNQTGICSCD 636
G G+ CP C+G +CN QTGIC+CD
Sbjct: 845 PVSDCSGHGYCDTTIGQCNCDSSHQGAGCEMDLILCPTSNKATCSGWGTCNYQTGICTCD 904
Score = 57.4 bits (137), Expect = 1e-06
Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 12/126 (9%)
Frame = +1
Query: 211 CPVGANGFECSGYL-------NGICNDN-GECSCIPPYYEKDC--GYILCPIXXXXXXXX 360
C +G G +CSG +GIC+ G+C+C + + C I CP
Sbjct: 976 CDIGRVGADCSGIRCQSDCNGHGICDTTIGKCNCDSSHQGESCELNLITCPSKNNIECSG 1035
Query: 361 XXXXXXXTGVCSCNTDYYESDCSKKRCPTGSNGFECSGN--TNGRCDSESGECECNSDRQ 534
TG+CSCN SDCS G CS N NG C+ + G+C+C + +
Sbjct: 1036 LGSCNNQTGICSCNDGTTYSDCS---------GILCSVNCLNNGVCNYDIGKCKCTPNWK 1086
Query: 535 GIDCGT 552
+C T
Sbjct: 1087 SDNCTT 1092
Score = 42.4 bits (98), Expect = 0.040
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Frame = +1
Query: 460 FECSG--NTNGRCDSESGECECNSDRQGIDCGTGFRQ--CPIYQDQL-CNGKS-CNNQTG 621
F+C + +G C S +G C+C GIDC + CP L C+G C+ +TG
Sbjct: 621 FQCLNGCSNHGLCISRTGSCDCYEGYGGIDCSSIVVSLICPSNDSSLICSGFGICDKKTG 680
Query: 622 ICSCDPGVT 648
+C+C G T
Sbjct: 681 VCACGTGRT 689
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,677,158,761
Number of extensions: 32238026
Number of successful extensions: 75133
Number of sequences better than 10.0: 659
Number of HSP's gapped: 71517
Number of HSP's successfully gapped: 1666
Length of query: 457
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 325
Effective length of database: 623,955,076
Effective search space: 202785399700
Effective search space used: 202785399700
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
1 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |