| Contig-U12453-1 |
| Contig ID |
Contig-U12453-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1024 |
| Chromosome number (1..6, M) |
5 |
| Chromosome length |
5062330 |
| Start point |
1477071 |
| End point |
1478078 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
1 |
| Number of EST |
2 |
| Link to clone list |
U12453 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.30 |
| Homology vs DNA |
Query= Contig-U12453-1 (Contig-U12453-1Q) /CSM_Contig/Contig-U12453-1Q.Seq.d
(1034 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ439961) Dictyostelium discoideum cDNA clone:ddv42o02, 3' ... 1227 0.0 1
(BJ421313) Dictyostelium discoideum cDNA clone:ddv42o02, 5' ... 161 3e-51 2
(DJ134669) Method for identification of useful proteins deri... 72 5e-34 5
(AR548828) Sequence 3959 from patent US 6747137. 78 3e-28 5
(AX489159) Sequence 6459 from Patent WO02053728. 78 4e-28 5
(AL441416) T3 end of clone XBD0AA001H05 of library XBD0AA fr... 92 7e-27 3
(AZ674593) ENTKA20TR Entamoeba histolytica Sheared DNA Entam... 109 5e-24 3
(FE707333) Pv049D_M13R_E07.ab1 Phaseolus vulgaris cv Early g... 54 2e-22 5
(EA377062) Sequence 25885 from patent US 7314974. 82 8e-18 2
(DQ156226) Schizosaccharomyces pombe RNA polymerase III larg... 82 9e-18 2
(CF721238) CCAI745TF C.neoformans strain JEC21 Cryptococcus ... 60 1e-16 3
(CF707427) CCAEK91TO C.neoformans strain JEC21 Cryptococcus ... 60 2e-16 3
(CJ379696) Molgula tectiformis cDNA, gastrula/neurula clone:... 66 5e-16 3
(CJ382347) Molgula tectiformis cDNA, gastrula/neurula clone:... 66 5e-16 3
(CJ359365) Molgula tectiformis cDNA, cleaving embryo clone:m... 66 5e-16 3
(DQ332268) Synthetic construct Saccharomyces cerevisiae clon... 86 6e-16 3
(EA397254) Sequence 46078 from patent US 7314974. 86 6e-16 3
(DJ208064) Method for identification of useful proteins deri... 86 6e-16 3
(CJ403428) Molgula tectiformis cDNA, gonad clone:mtgd007j06,... 66 7e-16 3
(CR380958) Candida glabrata strain CBS138 chromosome L compl... 98 8e-16 1
(Z75115) S.cerevisiae chromosome XV reading frame ORF YOR207c. 86 9e-16 3
(M38723) Saccharomyces cerevisiae tyrosine phosphatase PTP2,... 86 2e-15 3
(ES405893) MUT02-H11.y1d-s SHGC-MUT Mytilus californianus cD... 54 2e-15 4
(CU329670) Schizosaccharomyces pombe chromosome I. 82 1e-14 2
(CJ356658) Molgula tectiformis cDNA, cleaving embryo clone:m... 66 2e-14 3
(CJ387086) Molgula tectiformis cDNA, gastrula/neurula clone:... 66 2e-14 3
(CJ379347) Molgula tectiformis cDNA, gastrula/neurula clone:... 66 2e-14 3
(CJ376484) Molgula tectiformis cDNA, gastrula/neurula clone:... 66 2e-14 3
(CZ538294) SRAA-aad18g03.g1 Strongyloides ratti whole genome... 62 1e-13 4
(DJ025883) Genome-wide DNA marker of Saccharomyces cerevisiae. 86 3e-12 1
(AL397419) T7 end of clone AS0AA002G11 of library AS0AA from... 72 5e-12 2
(EH535168) FDR107-P00070-DEPE-R_J17 FDR107 Danio rerio cDNA ... 72 7e-12 3
(CR382139) Debaryomyces hansenii chromosome G of strain CBS7... 64 2e-11 3
(CX591989) TTE00024452 Amplicon Express - Conjugative Form T... 58 9e-11 3
(FF573074) TTECO16TVB Tetrahymena thermophila conjugation cD... 58 1e-10 3
(FF575418) TTEFG82THB Tetrahymena thermophila conjugation cD... 58 1e-10 3
(FF573351) TTEFS17THC Tetrahymena thermophila conjugation cD... 58 1e-10 3
(FF573109) TTECP05THB Tetrahymena thermophila conjugation cD... 58 1e-10 3
(CP000866) Nitrosopumilus maritimus SCM1, complete genome. 78 7e-10 1
(BJ340892) Dictyostelium discoideum cDNA clone:dda4e10, 3' e... 50 8e-10 3
(AU264504) Dictyostelium discoideum vegetative cDNA clone:VS... 50 9e-10 3
(BJ382879) Dictyostelium discoideum cDNA clone:ddc46m06, 3' ... 50 9e-10 3
(BJ406109) Dictyostelium discoideum cDNA clone:dds34n02, 3' ... 50 1e-09 3
(BJ344246) Dictyostelium discoideum cDNA clone:dda18k21, 3' ... 50 1e-09 3
(BJ355425) Dictyostelium discoideum cDNA clone:dda57d06, 3' ... 50 1e-09 3
(BJ355067) Dictyostelium discoideum cDNA clone:dda55l16, 3' ... 50 1e-09 3
(AI884026) fc72c12.x1 Zebrafish WashU MPIMG EST Danio rerio ... 72 1e-09 2
(BJ408194) Dictyostelium discoideum cDNA clone:dds45c04, 3' ... 50 1e-09 3
(CX575397) TTE00034396 Amplicon Express - Conjugative Form T... 58 1e-09 2
(CX586468) TTE00033355 Amplicon Express - Conjugative Form T... 58 1e-09 2
(AX489154) Sequence 6454 from Patent WO02053728. 56 1e-09 3
(EK209570) 1095460093836 Global-Ocean-Sampling_GS-31-01-01-1... 60 2e-09 4
(CR382126) Kluyveromyces lactis strain NRRL Y-1140 chromosom... 74 1e-08 1
(CZ281461) cp17b02.r Candida parapsilosis Random Genomic Lib... 74 1e-08 1
(EJ454663) 1093016071781 Global-Ocean-Sampling_GS-28-01-01-1... 46 1e-08 3
(EY981095) CATH11644.fwd CATH Sporobolomyces roseus IAM 1348... 40 2e-08 3
(FC002646) CATH8940.rev CATH Sporobolomyces roseus IAM 13481... 40 2e-08 3
(EY978912) CATH10552.fwd CATH Sporobolomyces roseus IAM 1348... 40 2e-08 3
(EY989133) CATH16237.fwd CATH Sporobolomyces roseus IAM 1348... 40 2e-08 3
(BI772858) kp77d02.y2 TBN95TM-SSFH Strongyloides stercoralis... 54 2e-08 3
(CJ364306) Molgula tectiformis cDNA, cleaving embryo clone:m... 66 4e-08 2
(CJ353837) Molgula tectiformis cDNA, cleaving embryo clone:m... 66 4e-08 2
(BX572646) Zebrafish DNA sequence from clone DKEY-245O11 in ... 72 5e-08 1
(BX465207) Zebrafish DNA sequence from clone DKEY-103I16 in ... 72 5e-08 1
(CU104722) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 72 5e-08 1
(CJ356613) Molgula tectiformis cDNA, cleaving embryo clone:m... 66 5e-08 2
(AY485615) Candida tropicalis DNA-dependent RNA polymerase I... 52 5e-08 3
(DR407775) mhn42c05.b1 C.remanei EST SB146 Caenorhabditis re... 58 6e-08 3
(CV151443) tai69b09.x2 Hydra EST UCI 5 ALP Hydra magnipapill... 44 6e-08 3
(EH606082) FDR306-P00028-DEPE-R_K16 FDR306 Danio rerio cDNA ... 64 7e-08 2
(AL429493) clone BA0AB032A02 of library BA0AB from strain CL... 54 8e-08 2
(EK037881) 1092959484576 Global-Ocean-Sampling_GS-31-01-01-1... 54 9e-08 2
(CD420086) rj18h10.y1 Meloidogyne chitwoodi J2 pDNR LIB Melo... 50 2e-07 2
(CJ420546) Molgula tectiformis cDNA, larva clone:mtlv004l15,... 52 3e-07 2
(DY596998) KIDNEYF031279N14 POSSUM_01-POSSUM-KIDNEY-2KB Tric... 54 3e-07 2
(EC296951) OVARYF088532M3 POSSUM_01-POSSUM-C-OVARY-2KB Trich... 54 3e-07 2
(EC309689) OVARYF089642F4 POSSUM_01-POSSUM-C-OVARY-2KB Trich... 54 3e-07 2
(EE002194) ROE00010688 Rhizopus oryzae Company Rhizopus oryz... 48 3e-07 4
(EJ614249) 1092963007285 Global-Ocean-Sampling_GS-29-01-01-1... 52 3e-07 2
(EJ613295) 1092963000565 Global-Ocean-Sampling_GS-29-01-01-1... 52 3e-07 2
(EJ463055) 1093041158459 Global-Ocean-Sampling_GS-28-01-01-1... 54 8e-07 3
(AR548838) Sequence 3969 from patent US 6747137. 50 1e-06 2
(CJ365757) Molgula tectiformis cDNA, cleaving embryo clone:m... 66 3e-06 1
(FF631873) G825P550RC2.T0 Acorn worm normalized gastrula pEx... 48 3e-06 2
(AZ538709) ENTGC82TF Entamoeba histolytica Sheared DNA Entam... 58 4e-06 3
(DT202661) JGI_CAAS11496.rev CAAS Pimephales promelas brain ... 50 4e-06 2
(DT298316) JGI_CAAW9115.rev CAAW Pimephales promelas testis ... 50 4e-06 2
(DT283961) JGI_CAAV11276.rev CAAV Pimephales promelas testis... 50 4e-06 2
(CJ400162) Molgula tectiformis cDNA, gonad clone:mtgd011f16,... 54 4e-06 2
(DT272943) JGI_CAAV4916.rev CAAV Pimephales promelas testis ... 50 4e-06 2
(DT284935) JGI_CAAV11840.rev CAAV Pimephales promelas testis... 50 4e-06 2
(DT197479) JGI_CAAS5546.rev CAAS Pimephales promelas brain 7... 50 4e-06 2
(AX489338) Sequence 6638 from Patent WO02053728. 50 4e-06 2
(DT310522) JGI_CAAX1833.rev CAAX Pimephales promelas testis ... 50 4e-06 2
(EK483930) 1095469535225 Global-Ocean-Sampling_GS-32-01-01-1... 64 1e-05 1
(EH297530) UAHYP_05A_R_G06 UaHyphae_ARS Uromyces appendicula... 46 1e-05 2
(EH297529) UAHYP_05A_F_G06 UaHyphae_ARS Uromyces appendicula... 46 1e-05 2
(EB811916) 3760_F08 Botrytis cinerea expressed sequence tags... 42 4e-05 3
(DR052157) RTCA1_2_F11.g1_A029 Roots minus calcium Pinus tae... 54 4e-05 3
(DR052147) RTCA1_2_E11.g1_A029 Roots minus calcium Pinus tae... 54 4e-05 3
>(BJ439961) Dictyostelium discoideum cDNA clone:ddv42o02, 3' end,
single read.
Length = 635
Score = 1227 bits (619), Expect = 0.0
Identities = 634/634 (100%)
Strand = Plus / Minus
Query: 401 taggtatttgtccagacattattatgaatcttcatggtttcccatctcgtatgactattg 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 taggtatttgtccagacattattatgaatcttcatggtttcccatctcgtatgactattg 576
Query: 461 gtaaaatgattgaattgttggctggtaaagcgggtgtcttgagtggtaaatttggttttg 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gtaaaatgattgaattgttggctggtaaagcgggtgtcttgagtggtaaatttggttttg 516
Query: 521 gtacttgttttggtggtgatcgtgttgaaaatatctccaaagtactcattagcaaaggtt 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gtacttgttttggtggtgatcgtgttgaaaatatctccaaagtactcattagcaaaggtt 456
Query: 581 tcagttatggtggtaaagattatgttaccagtggtgtaactggtgaaccattggcatgtt 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tcagttatggtggtaaagattatgttaccagtggtgtaactggtgaaccattggcatgtt 396
Query: 641 tcatctttttcggaccaatcttttatcaaaaactcaagcatatggtcatggataaaatgc 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tcatctttttcggaccaatcttttatcaaaaactcaagcatatggtcatggataaaatgc 336
Query: 701 atgntcgtgntcgtggtccaacagtaactctaacaagacaacctaccgaaggtagagcaa 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 atgntcgtgntcgtggtccaacagtaactctaacaagacaacctaccgaaggtagagcaa 276
Query: 761 gaggtggtggtcttcgtttaggtgagatggaaagagattgtctcattggttatggtgctt 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gaggtggtggtcttcgtttaggtgagatggaaagagattgtctcattggttatggtgctt 216
Query: 821 cagctctcatcatggaaagattaatgatntcctctgatagattcacagtttatgcttgta 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 cagctctcatcatggaaagattaatgatntcctctgatagattcacagtttatgcttgta 156
Query: 881 aaaattgtggtttcnttggttatgaaggttattgtcaatattgtaagagtagtgtcgata 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aaaattgtggtttcnttggttatgaaggttattgtcaatattgtaagagtagtgtcgata 96
Query: 941 tctcaacaattcaaataccatatgcttgtaaattattattccaagaattacaagcaatga 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 tctcaacaattcaaataccatatgcttgtaaattattattccaagaattacaagcaatga 36
Query: 1001 atattgtaccacgtcttaaactagtnattcttaa 1034
||||||||||||||||||||||||||||||||||
Sbjct: 35 atattgtaccacgtcttaaactagtnattcttaa 2
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 807,774,871
Number of extensions: 47394905
Number of successful extensions: 3808246
Number of sequences better than 10.0: 428
Length of query: 1034
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1010
Effective length of database: 97,308,875,965
Effective search space: 98281964724650
Effective search space used: 98281964724650
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7. 3 |
| Homology vs Protein |
Query= Contig-U12453-1 (Contig-U12453-1Q) /CSM_Contig/Contig-U12453-1Q.Seq.d
(1034 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK001161_1(AK001161|pid:none) Homo sapiens cDNA FLJ10299 fis, cl... 288 2e-76
CR926474_1(CR926474|pid:none) Pongo abelii mRNA; cDNA DKFZp469K1... 288 2e-76
AY092084_1(AY092084|pid:none) Homo sapiens RNA polymerase III su... 288 2e-76
AK122713_1(AK122713|pid:none) Homo sapiens cDNA FLJ16205 fis, cl... 288 2e-76
BX537447_1(BX537447|pid:none) Homo sapiens mRNA; cDNA DKFZp686D1... 286 6e-76
BC166377_1(BC166377|pid:none) Xenopus tropicalis hypothetical pr... 285 1e-75
CR380958_114(CR380958|pid:none) Candida glabrata strain CBS138 c... 271 2e-71
AP007151_734(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 268 3e-70
CP001576_191(CP001576|pid:none) Micromonas sp. RCC299 chromosome... 266 9e-70
CR382126_43(CR382126|pid:none) Kluyveromyces lactis strain NRRL ... 264 4e-69
(P22276) RecName: Full=DNA-directed RNA polymerase III subunit R... 264 4e-69
M38723_2(M38723|pid:none) Saccharomyces cerevisiae tyrosine phos... 264 4e-69
CU928168_404(CU928168|pid:none) Kluyveromyces thermotolerans str... 263 6e-69
CR382139_993(CR382139|pid:none) Debaryomyces hansenii strain CBS... 263 1e-68
FN392322_236(FN392322|pid:none) Pichia pastoris GS115 chromosome... 261 3e-68
U00050_9(U00050|pid:none) Caenorhabditis elegans cosmid F09F7, c... 261 4e-68
T16011(T16011)hypothetical protein F09F7.3 - Caenorhabditis eleg... 261 4e-68
AE016817_126(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 260 5e-68
AE017349_40(AE017349|pid:none) Cryptococcus neoformans var. neof... 259 1e-67
AC135796_19(AC135796|pid:none) Medicago truncatula clone mth2-28... 257 5e-67
AY121645_1(AY121645|pid:none) Drosophila melanogaster LD14594 fu... 255 2e-66
RNFF32(S16894) DNA-directed RNA polymerase (EC 2.7.7.6) III seco... 255 2e-66
AC118134_7(AC118134|pid:none) Oryza sativa chromosome 3 BAC OSJN... 252 1e-65
CR954201_604(CR954201|pid:none) Ostreococcus tauri strain OTTH05... 241 4e-62
AE014188_66(AE014188|pid:none) Plasmodium falciparum 3D7 chromos... 235 2e-60
AB012240_1(AB012240|pid:none) Arabidopsis thaliana genomic DNA, ... 235 2e-60
AL355926_1(AL355926|pid:none) Neurospora crassa DNA linkage grou... 235 2e-60
FN357450_60(FN357450|pid:none) Schistosoma mansoni genome sequen... 231 2e-59
AM910995_54(AM910995|pid:none) Plasmodium knowlesi strain H chro... 230 7e-59
AY548894_2(AY548894|pid:none) Antonospora locustae hypothetical ... 228 3e-58
AM494957_409(AM494957|pid:none) Leishmania braziliensis chromoso... 225 2e-57
AF339907_1(AF339907|pid:none) Leishmania major DNA-directed RNA ... 223 1e-56
CT005259_1(CT005259|pid:none) Leishmania major strain Friedlin, ... 223 1e-56
(Q8SR75) RecName: Full=DNA-directed RNA polymerase II subunit RP... 186 2e-45
DQ058628_1(DQ058628|pid:none) Rhododendron macrophyllum RNA poly... 183 7e-45
DQ020637_1(DQ020637|pid:none) Antirrhinum majus RNA polymerase I... 182 1e-44
DQ058637_1(DQ058637|pid:none) Linanthus californicus RNA polymer... 182 2e-44
Z19121_1(Z19121|pid:none) A.thaliana gene for RNA polymerase II ... 180 8e-44
Z19120_1(Z19120|pid:none) A.thaliana mRNA for RNA polymerase II ... 180 8e-44
DQ020640_1(DQ020640|pid:none) Nicotiana sylvestris RNA polymeras... 180 8e-44
AP008209_2128(AP008209|pid:none) Oryza sativa (japonica cultivar... 180 8e-44
(P15351) RecName: Full=DNA-directed RNA polymerase subunit B'; ... 179 1e-43
DQ020641_1(DQ020641|pid:none) Petunia x hybrida RNA polymerase I... 179 1e-43
CR936257_56(CR936257|pid:none) Natronomonas pharaonis DSM 2160 c... 178 2e-43
DQ029103_1(DQ029103|pid:none) Spirogyra sp. UWCC FW670 RNA polym... 178 2e-43
BT068015_1(BT068015|pid:none) Zea mays full-length cDNA clone ZM... 178 3e-43
AE017344_345(AE017344|pid:none) Cryptococcus neoformans var. neo... 178 3e-43
DQ020642_1(DQ020642|pid:none) Antirrhinum majus RNA polymerase I... 178 3e-43
DQ058627_1(DQ058627|pid:none) Rhododendron macrophyllum RNA poly... 177 4e-43
CP000855_219(CP000855|pid:none) Thermococcus onnurineus NA1, com... 177 5e-43
(Q6FLD5) RecName: Full=DNA-directed RNA polymerase II subunit RP... 177 5e-43
CU928176_503(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 177 7e-43
(Q753Q4) RecName: Full=DNA-directed RNA polymerase II subunit RP... 177 7e-43
CP001398_1927(CP001398|pid:none) Thermococcus gammatolerans EJ3,... 176 9e-43
CP000504_697(CP000504|pid:none) Pyrobaculum islandicum DSM 4184,... 176 9e-43
CU928171_114(CU928171|pid:none) Kluyveromyces thermotolerans str... 176 9e-43
CP001014_1920(CP001014|pid:none) Thermoproteus neutrophilus V24S... 176 9e-43
AM910986_43(AM910986|pid:none) Plasmodium knowlesi strain H chro... 176 1e-42
AP006878_1084(AP006878|pid:none) Thermococcus kodakarensis KOD1 ... 175 3e-42
DQ020638_1(DQ020638|pid:none) Petunia x hybrida RNA polymerase I... 174 3e-42
AE009950_1564(AE009950|pid:none) Pyrococcus furiosus DSM 3638, c... 174 3e-42
AB433782_3(AB433782|pid:none) Haloarcula japonica rpoH, rpoB'', ... 174 5e-42
AE001362_148(AE001362|pid:none) Plasmodium falciparum 3D7 chromo... 174 5e-42
AE009441_442(AE009441|pid:none) Pyrobaculum aerophilum str. IM2,... 174 6e-42
A71032(A71032) probable DNA-directed RNA polymerase subunit B - ... 172 1e-41
CR940353_306(CR940353|pid:none) Theileria annulata strain Ankara... 172 1e-41
CP000505_286(CP000505|pid:none) Thermofilum pendens Hrk 5, compl... 172 1e-41
AF083031_50(AF083031|pid:none) Guillardia theta nucleomorph chro... 172 1e-41
S70415(S70415) DNA-directed RNA polymerase (EC 2.7.7.6) II secon... 172 2e-41
CP000493_1513(CP000493|pid:none) Hyperthermus butylicus DSM 5456... 172 2e-41
DQ020636_1(DQ020636|pid:none) Nicotiana sylvestris RNA polymeras... 171 3e-41
(Q10578) RecName: Full=DNA-directed RNA polymerase II subunit RP... 171 3e-41
FN357318_14(FN357318|pid:none) Schistosoma mansoni genome sequen... 171 5e-41
(A5DHT2) RecName: Full=DNA-directed RNA polymerase II subunit RP... 170 9e-41
CP000254_48(CP000254|pid:none) Methanospirillum hungatei JF-1, c... 170 9e-41
CP001324_413(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 169 1e-40
(Q54J75) RecName: Full=DNA-directed RNA polymerase II subunit rp... 169 2e-40
FJ914623_1(FJ914623|pid:none) Epichloe festucae strain E2368 DNA... 167 4e-40
CP000682_33(CP000682|pid:none) Metallosphaera sedula DSM 5348, c... 166 9e-40
BC038472_1(BC038472|pid:none) Mus musculus polymerase (RNA) II (... 166 9e-40
(P30876) RecName: Full=DNA-directed RNA polymerase II subunit RP... 166 9e-40
AK294901_1(AK294901|pid:none) Homo sapiens cDNA FLJ61678 complet... 166 9e-40
BC142267_1(BC142267|pid:none) Bos taurus polymerase (RNA) II (DN... 166 9e-40
AK299090_1(AK299090|pid:none) Homo sapiens cDNA FLJ59391 complet... 166 9e-40
BX284752_32(BX284752|pid:none) Neurospora crassa DNA linkage gro... 166 1e-39
CP000300_1077(CP000300|pid:none) Methanococcoides burtonii DSM 6... 166 2e-39
BT059230_1(BT059230|pid:none) Salmo salar clone ssal-rgf-535-090... 166 2e-39
D13337_1(D13337|pid:none) Schizosaccharomyces pombe rpb2 gene fo... 165 2e-39
AL138854_1(AL138854|pid:none) S.pombe chromosome I cosmid c23G3.... 165 2e-39
CP000581_176(CP000581|pid:none) Ostreococcus lucimarinus CCE9901... 165 2e-39
AF265351_1(AF265351|pid:none) Sus scrofa DNA-directed RNA polyme... 165 3e-39
CR954201_170(CR954201|pid:none) Ostreococcus tauri strain OTTH05... 165 3e-39
(Q60181) RecName: Full=DNA-directed RNA polymerase subunit B'; ... 164 4e-39
CP000562_298(CP000562|pid:none) Methanoculleus marisnigri JR1, c... 164 6e-39
X05709_1(X05709|pid:none) Drosophila DmRP140 gene for RNA polyme... 163 8e-39
DQ499800_1(DQ499800|pid:none) Phaeosphaeria avenaria f. sp. trit... 163 8e-39
DQ056143_29(DQ056143|pid:none) Coprinellus disseminatus strain C... 163 1e-38
DQ499798_1(DQ499798|pid:none) Phaeosphaeria sp. S-93-48 RNA poly... 163 1e-38
DQ499810_1(DQ499810|pid:none) Phaeosphaeria avenaria f. sp. aven... 163 1e-38
DQ499813_1(DQ499813|pid:none) Phaeosphaeria avenaria f. sp. aven... 163 1e-38
DQ278491_1(DQ278491|pid:none) Phaeosphaeria nodorum second large... 163 1e-38
AM502249_16(AM502249|pid:none) Leishmania infantum chromosome 31. 162 2e-38
CT005268_16(CT005268|pid:none) Leishmania major strain Friedlin,... 162 2e-38
CP000780_1924(CP000780|pid:none) Candidatus Methanoregula boonei... 161 4e-38
CP000968_1509(CP000968|pid:none) Candidatus Korarchaeum cryptofi... 160 9e-38
CP000816_649(CP000816|pid:none) Ignicoccus hospitalis KIN4/I, co... 160 9e-38
CP000477_28(CP000477|pid:none) Methanosaeta thermophila PT, comp... 159 1e-37
CP001338_2062(CP001338|pid:none) Candidatus Methanosphaerula pal... 159 2e-37
AM920436_1268(AM920436|pid:none) Penicillium chrysogenum Wiscons... 159 2e-37
AF165818_28(AF165818|pid:none) Guillardia theta nucleomorph chro... 159 2e-37
AY485615_1(AY485615|pid:none) Candida tropicalis DNA-dependent R... 158 3e-37
(O27124) RecName: Full=DNA-directed RNA polymerase subunit B'; ... 157 4e-37
AF107797_1(AF107797|pid:none) Capronia mansonii DNA-dependent RN... 157 4e-37
AE006641_201(AE006641|pid:none) Sulfolobus solfataricus P2, comp... 157 7e-37
FJ515667_1(FJ515667|pid:none) Sulfolobus shibatae B12 RNA polyme... 157 7e-37
AJ809529_1(AJ809529|pid:none) Halococcus morrhuae partial rpoB g... 156 1e-36
CU633454_208(CU633454|pid:none) Podospora anserina genomic DNA c... 156 1e-36
AY485613_1(AY485613|pid:none) Pichia guilliermondii DNA-dependen... 155 2e-36
EU016603_2(EU016603|pid:none) Uncultured marine microorganism HF... 155 2e-36
CP001403_1949(CP001403|pid:none) Sulfolobus islandicus Y.G.57.14... 155 2e-36
AF510641_1(AF510641|pid:none) Giardia intestinalis RNA polymeras... 154 5e-36
CP001399_1861(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 153 8e-36
DQ158857_96(DQ158857|pid:none) Bigelowiella natans nucleomorph c... 153 1e-35
AB295624_1(AB295624|pid:none) Natrinema versiforme rpoB' gene fo... 150 7e-35
AF064612_1(AF064612|pid:none) Chironia linoides RNA polymerase I... 149 2e-34
AF107787_1(AF107787|pid:none) Candida albicans DNA-dependent RNA... 149 2e-34
S04716(S04716) DNA-directed RNA polymerase (EC 2.7.7.6) chain B ... 149 2e-34
AY815953_1(AY815953|pid:none) Schistosoma japonicum SJCHGC09486 ... 148 3e-34
AJ809523_1(AJ809523|pid:none) Natrinema pallidum partial rpoB ge... 148 3e-34
AJ890364_438(AJ890364|pid:none) Emiliania huxleyi virus 86 isola... 148 3e-34
AB295635_1(AB295635|pid:none) Natronococcus occultus rpoB' gene ... 147 5e-34
AJ809519_1(AJ809519|pid:none) Halosimplex carlsbadense partial r... 147 5e-34
BX950229_1362(BX950229|pid:none) Methanococcus maripaludis strai... 147 6e-34
CP000559_1153(CP000559|pid:none) Methanocorpusculum labreanum Z,... 147 6e-34
CP000609_215(CP000609|pid:none) Methanococcus maripaludis C5, co... 147 6e-34
AB295634_1(AB295634|pid:none) Natronococcus amylolyticus rpoB' g... 147 8e-34
CP000867_1298(CP000867|pid:none) Methanococcus maripaludis C6, c... 147 8e-34
AB295637_1(AB295637|pid:none) Natronolimnobius baerhuensis rpoB'... 146 1e-33
AB295627_1(AB295627|pid:none) Natronorubrum bangense rpoB' gene ... 146 1e-33
AB295625_1(AB295625|pid:none) Halobiforma nitratireducens rpoB' ... 145 2e-33
AJ809524_1(AJ809524|pid:none) Natronobacterium gregoryi partial ... 145 2e-33
AF107793_1(AF107793|pid:none) Emericella nidulans DNA-dependent ... 145 3e-33
AB295632_1(AB295632|pid:none) Natrialba hulunbeirensis rpoB' gen... 145 3e-33
AF064610_1(AF064610|pid:none) Mostuea brunonis RNA polymerase II... 144 4e-33
AJ809511_1(AJ809511|pid:none) Halobiforma haloterrestris partial... 144 4e-33
BA000011_1208(BA000011|pid:none) Thermoplasma volcanium GSS1 DNA... 144 4e-33
AJ809522_1(AJ809522|pid:none) Natrialba asiatica partial rpoB ge... 144 5e-33
DQ011642_1(DQ011642|pid:none) Antirrhinum majus RNA polymerase I... 144 5e-33
AB295633_1(AB295633|pid:none) Natrialba magadii rpoB' gene for D... 144 5e-33
AJ133214_1(AJ133214|pid:none) Buddleja asiatica rpb2-d gene, par... 144 5e-33
AJ133219_1(AJ133219|pid:none) Stephanotis floribunda rpb2-d gene... 144 7e-33
AJ133240_1(AJ133240|pid:none) Rondeletia odorata rpb2-d gene, pa... 144 7e-33
AJ133239_1(AJ133239|pid:none) Pinckneya pubescens rpb2-d gene, p... 144 7e-33
AJ133236_1(AJ133236|pid:none) Mussaenda erythrophylla rpb2-d gen... 144 7e-33
AB295629_1(AB295629|pid:none) Haloferax sp. BV2 rpoB' gene for D... 143 9e-33
AJ133231_1(AJ133231|pid:none) Strychnos potatorum rpb2-d gene, p... 143 9e-33
AJ133235_1(AJ133235|pid:none) Gardenia thunbergia rpb2-d gene, p... 143 9e-33
AJ809513_1(AJ809513|pid:none) Haloferax denitrificans partial rp... 143 9e-33
AP008214_347(AP008214|pid:none) Oryza sativa (japonica cultivar-... 143 1e-32
AP005606_12(AP005606|pid:none) Oryza sativa Japonica Group genom... 143 1e-32
AF064611_1(AF064611|pid:none) Periploca graeca RNA polymerase II... 143 1e-32
AJ133218_1(AJ133218|pid:none) Alstonia scholaris rpb2-d gene, pa... 143 1e-32
AJ133226_1(AJ133226|pid:none) Gardneria angustifolia rpb2-d gene... 142 1e-32
AB295631_1(AB295631|pid:none) Natrialba chahannaoensis rpoB' gen... 142 1e-32
AJ133227_1(AJ133227|pid:none) Logania vaginalis rpb2-d gene, par... 142 2e-32
AJ133233_1(AJ133233|pid:none) Usteria guineensis rpb2-d gene, pa... 142 2e-32
AB295626_1(AB295626|pid:none) Halobiforma lacisalsi rpoB' gene f... 142 2e-32
AJ133238_1(AJ133238|pid:none) Ophiorrhiza mungos rpb2-d gene, pa... 141 3e-32
AJ565934_1(AJ565934|pid:none) Solanum lycopersicon partial rpb2 ... 141 3e-32
AJ809514_1(AJ809514|pid:none) Haloferax mediterranei partial rpo... 141 3e-32
(Q03587) RecName: Full=DNA-directed RNA polymerase subunit B; ... 141 3e-32
AJ556177_1(AJ556177|pid:none) Vicia sativa partial rpb2 gene for... 141 3e-32
AJ133221_1(AJ133221|pid:none) Gelsemium sempervirens rpb2-d gene... 141 4e-32
AJ133237_1(AJ133237|pid:none) Oldenlandia corymbosa rpb2-d gene,... 141 4e-32
EF222315_1(EF222315|pid:none) Beauveria bassiana strain ARSEF 15... 140 6e-32
AL606455_6(AL606455|pid:none) Oryza sativa genomic DNA, chromoso... 140 6e-32
AP008210_2054(AP008210|pid:none) Oryza sativa (japonica cultivar... 140 6e-32
DQ011644_1(DQ011644|pid:none) Lunularia cruciata RNA polymerase ... 140 6e-32
AJ133217_1(AJ133217|pid:none) Peltanthera floribunda rpb2-d gene... 140 7e-32
AJ133215_1(AJ133215|pid:none) Retzia capensis rpb2-d gene, parti... 140 7e-32
AJ556176_1(AJ556176|pid:none) Vicia sativa partial rpb2 gene for... 140 7e-32
AJ565937_1(AJ565937|pid:none) Mimulus guttatus partial rpb2 gene... 140 9e-32
AJ809510_1(AJ809510|pid:none) Halobaculum gomorrense partial rpo... 140 9e-32
AY303171_23(AY303171|pid:none) Solanum bulbocastanum chromosome ... 139 1e-31
AJ133225_1(AJ133225|pid:none) Antonia ovata rpb2-d gene, partial. 139 1e-31
DQ011646_1(DQ011646|pid:none) Psilotum nudum RNA polymerase IV s... 139 2e-31
AJ809515_1(AJ809515|pid:none) Halogeometricum borinquense partia... 139 2e-31
(Q7T6X7) RecName: Full=DNA-directed RNA polymerase subunit 2; ... 139 2e-31
DQ011647_1(DQ011647|pid:none) Selaginella erythropus RNA polymer... 139 2e-31
AJ133230_1(AJ133230|pid:none) Neuburgia corynocarpum rpb2-d gene... 138 4e-31
DQ000671_1(DQ000671|pid:none) Zea mays RNA polymerase IV second ... 138 4e-31
AF064613_1(AF064613|pid:none) Kopsia fruticosa RNA polymerase II... 137 6e-31
AF064614_1(AF064614|pid:none) Mostuea brunonis RNA polymerase II... 137 8e-31
AJ133216_1(AJ133216|pid:none) Sanango racemosum rpb2-d gene, par... 136 1e-30
AL590443_43(AL590443|pid:none) chromosome III of strain GB-M1 of... 136 1e-30
AB295630_1(AB295630|pid:none) Halorubrum vacuolatum rpoB' gene f... 135 3e-30
AP008216_946(AP008216|pid:none) Oryza sativa (japonica cultivar-... 134 5e-30
AC068950_1(AC068950|pid:none) Oryza sativa chromosome 10 BAC OSJ... 134 5e-30
DQ011648_1(DQ011648|pid:none) Sphagnum sp. JL-2005 RNA polymeras... 134 7e-30
DQ358896_1(DQ358896|pid:none) Guettarda uruguensis RNA polymeras... 131 3e-29
DQ358893_1(DQ358893|pid:none) Calycophyllum candidissimum RNA po... 131 3e-29
DQ358895_1(DQ358895|pid:none) Ixora parviflora RNA polymerase II... 131 3e-29
JQ0354(JQ0354;S07025) DNA-directed RNA polymerase (EC 2.7.7.6) I... 131 4e-29
(P20028) RecName: Full=DNA-directed RNA polymerase I subunit RPA... 131 4e-29
DQ358892_1(DQ358892|pid:none) Rubia tinctorum RNA polymerase II ... 129 1e-28
BC148064_1(BC148064|pid:none) Bos taurus polymerase (RNA) I poly... 129 1e-28
AE017346_399(AE017346|pid:none) Cryptococcus neoformans var. neo... 129 2e-28
(P28365) RecName: Full=DNA-directed RNA polymerase I subunit RPA... 128 4e-28
DQ358889_1(DQ358889|pid:none) Alstonia scholaris RNA polymerase ... 128 4e-28
AK022890_1(AK022890|pid:none) Homo sapiens cDNA FLJ12828 fis, cl... 127 6e-28
AK294027_1(AK294027|pid:none) Homo sapiens cDNA FLJ61223 complet... 127 6e-28
BC096748_1(BC096748|pid:none) Homo sapiens polymerase (RNA) I po... 127 6e-28
BC110833_1(BC110833|pid:none) Homo sapiens polymerase (RNA) I po... 127 6e-28
AY521625_73(AY521625|pid:none) Singapore grouper iridovirus, com... 127 6e-28
AK022533_1(AK022533|pid:none) Homo sapiens cDNA FLJ12471 fis, cl... 127 6e-28
(Q9H9Y6) RecName: Full=DNA-directed RNA polymerase I subunit RPA... 127 6e-28
BC097040_1(BC097040|pid:none) Danio rerio zgc:66298, mRNA (cDNA ... 127 8e-28
FM992694_9(FM992694|pid:none) Candida dubliniensis CD36 chromoso... 127 8e-28
AY548484_63(AY548484|pid:none) Frog virus 3, complete genome. 127 8e-28
AP006852_55(AP006852|pid:none) Candida albicans genomic DNA, chr... 127 8e-28
(P70700) RecName: Full=DNA-directed RNA polymerase I subunit RPA... 126 1e-27
DQ914533_1(DQ914533|pid:none) Pichia pastoris strain GS115 RNA p... 126 1e-27
AK143501_1(AK143501|pid:none) Mus musculus 8 cells embryo 8 cell... 126 1e-27
T20870(T20870) hypothetical protein F14B4.3 - Caenorhabditis ele... 126 1e-27
AC022455_2(AC022455|pid:none) Arabidopsis thaliana chromosome 1 ... 125 2e-27
AY150217_44(AY150217|pid:none) Ambystoma tigrinum stebbensi viru... 125 2e-27
DQ029108_1(DQ029108|pid:none) Psilotum nudum RNA polymerase II s... 125 3e-27
AF397202_1(AF397202|pid:none) Regina ranavirus clone PstI-3.8 LC... 125 3e-27
BC059304_1(BC059304|pid:none) Xenopus laevis hypothetical protei... 124 5e-27
CR940353_301(CR940353|pid:none) Theileria annulata strain Ankara... 124 7e-27
AK230187_1(AK230187|pid:none) Arabidopsis thaliana mRNA for puta... 123 1e-26
DQ358891_1(DQ358891|pid:none) Bouvardia glaberrima RNA polymeras... 123 1e-26
CR382131_402(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 123 1e-26
AK176111_1(AK176111|pid:none) Arabidopsis thaliana mRNA for puta... 122 2e-26
(Q5REE8) RecName: Full=DNA-directed RNA polymerase I subunit RPA... 122 2e-26
AB020749_6(AB020749|pid:none) Arabidopsis thaliana genomic DNA, ... 122 2e-26
(Q9P7X8) RecName: Full=Probable DNA-directed RNA polymerase I su... 122 2e-26
(P22138) RecName: Full=DNA-directed RNA polymerase I subunit RPA... 122 2e-26
DQ358888_1(DQ358888|pid:none) Gentiana lutea RNA polymerase II (... 122 3e-26
CP001574_301(CP001574|pid:none) Micromonas sp. RCC299 chromosome... 120 6e-26
CU928181_108(CU928181|pid:none) Zygosaccharomyces rouxii strain ... 120 6e-26
(Q75DS1) RecName: Full=DNA-directed RNA polymerase I subunit RPA... 120 6e-26
CU633438_866(CU633438|pid:none) Podospora anserina genomic DNA c... 120 1e-25
CU928171_723(CU928171|pid:none) Kluyveromyces thermotolerans str... 119 1e-25
CR382122_255(CR382122|pid:none) Kluyveromyces lactis strain NRRL... 119 2e-25
(O74633) RecName: Full=DNA-directed RNA polymerase I subunit RPA... 119 2e-25
AY380826_25(AY380826|pid:none) Lymphocystis disease virus - isol... 117 7e-25
DQ302781_1(DQ302781|pid:none) Glomus mosseae isolate AFTOL-ID 13... 117 7e-25
AM270222_64(AM270222|pid:none) Aspergillus niger contig An11c005... 117 9e-25
AM494962_213(AM494962|pid:none) Leishmania braziliensis chromoso... 115 2e-24
AF083031_74(AF083031|pid:none) Guillardia theta nucleomorph chro... 114 4e-24
AM502243_63(AM502243|pid:none) Leishmania infantum chromosome 25. 114 4e-24
CT005264_63(CT005264|pid:none) Leishmania major strain Friedlin,... 114 6e-24
AY699218_1(AY699218|pid:none) Drimys winteri RNA polymerase II s... 114 6e-24
AF371960_34(AF371960|pid:none) Infectious spleen and kidney necr... 114 6e-24
AM920437_786(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 114 7e-24
AY563268_1(AY563268|pid:none) Dioscorea sansibarensis RNA polyme... 114 7e-24
AY566614_1(AY566614|pid:none) Akebia longeracemosa RNA polymeras... 114 7e-24
AY699223_1(AY699223|pid:none) Musa velutina RNA polymerase II se... 114 7e-24
DQ302778_1(DQ302778|pid:none) Entomophthora muscae isolate AFTOL... 113 9e-24
AJ563602_1(AJ563602|pid:none) Garrya elliptica partial rpb2 gene... 113 9e-24
AY566619_1(AY566619|pid:none) Antirrhinum majus RNA polymerase I... 113 9e-24
AJ557133_1(AJ557133|pid:none) Borago officinalis partial rpb2 ge... 113 9e-24
AJ565859_1(AJ565859|pid:none) Valeriana officinalis partial rpb2... 113 9e-24
AJ556165_1(AJ556165|pid:none) Fagonia lahovarii partial rpb2 gen... 112 2e-23
DQ302787_1(DQ302787|pid:none) Umbelopsis ramanniana isolate AFTO... 112 2e-23
CP000582_239(CP000582|pid:none) Ostreococcus lucimarinus CCE9901... 112 2e-23
AY699208_1(AY699208|pid:none) Cunninghamia lanceolata RNA polyme... 112 2e-23
AY563266_1(AY563266|pid:none) Sequoia sempervirens RNA polymeras... 112 2e-23
DQ029104_1(DQ029104|pid:none) Chara australis RNA polymerase II ... 112 2e-23
AJ557134_1(AJ557134|pid:none) Borago officinalis partial rpb2 ge... 111 4e-23
DQ302775_1(DQ302775|pid:none) Dimargaris bacillispora isolate AF... 111 4e-23
DQ302779_1(DQ302779|pid:none) Conidiobolus coronatus isolate AFT... 111 4e-23
DQ302785_1(DQ302785|pid:none) Rhopalomyces elegans isolate AFTOL... 111 5e-23
AY532606_33(AY532606|pid:none) Rock bream iridovirus strain RBIV... 110 6e-23
AY894343_36(AY894343|pid:none) Orange-spotted grouper iridovirus... 110 6e-23
DQ302780_1(DQ302780|pid:none) Scutellospora heterogama isolate A... 110 8e-23
AY699219_1(AY699219|pid:none) Asarum caudatum RNA polymerase II ... 110 8e-23
DQ302791_1(DQ302791|pid:none) Rozella allomycis isolate AFTOL-ID... 110 1e-22
FN357367_16(FN357367|pid:none) Schistosoma mansoni genome sequen... 110 1e-22
AJ565936_1(AJ565936|pid:none) Solanum lycopersicon partial rpb2 ... 109 1e-22
DQ302786_1(DQ302786|pid:none) Rhizophlyctis rosea isolate AFTOL-... 109 1e-22
AF107805_1(AF107805|pid:none) Sporormiella minima DNA-dependent ... 109 2e-22
AY485626_1(AY485626|pid:none) Mycosphaerella punctiformis DNA-de... 108 4e-22
AY786057_1(AY786057|pid:none) Grifola frondosa RNA polymerase II... 108 4e-22
DQ302792_1(DQ302792|pid:none) Synchytrium macrosporum isolate AF... 108 4e-22
DQ408123_1(DQ408123|pid:none) Spongipellis pachyodon isolate AFT... 108 4e-22
DQ408121_1(DQ408121|pid:none) Pycnoporus sp. ZW02.30 RNA polymer... 107 5e-22
DQ302784_1(DQ302784|pid:none) Mortierella verticillata isolate A... 107 5e-22
DQ302773_1(DQ302773|pid:none) Spizellomyces punctatus isolate AF... 107 7e-22
DQ408118_1(DQ408118|pid:none) Laetiporus sulphureus isolate AFTO... 107 7e-22
DQ408116_1(DQ408116|pid:none) Ganoderma tsugae isolate AFTOL-ID ... 107 7e-22
AK025574_1(AK025574|pid:none) Homo sapiens cDNA: FLJ21921 fis, c... 107 7e-22
AY699182_1(AY699182|pid:none) Psilotum nudum RNA polymerase II s... 107 7e-22
AY780934_1(AY780934|pid:none) Coprinus comatus isolate AFTOL-ID ... 107 9e-22
AY786059_1(AY786059|pid:none) Hygrophoropsis aurantiaca RNA poly... 107 9e-22
AY780940_1(AY780940|pid:none) Clavaria zollingeri isolate AFTOL-... 107 9e-22
AY786066_1(AY786066|pid:none) Suillus pictus RNA polymerase II s... 107 9e-22
DQ366282_1(DQ366282|pid:none) Coniophora arida isolate AFTOL-ID ... 107 9e-22
AY786065_1(AY786065|pid:none) Strobilomyces floccopus RNA polyme... 106 1e-21
AF107785_1(AF107785|pid:none) Agaricus bisporus DNA-dependent RN... 106 1e-21
DQ408120_1(DQ408120|pid:none) Polyporus squamosus isolate AFTOL-... 106 1e-21
AY780941_1(AY780941|pid:none) Climacodon septentrionalis isolate... 106 2e-21
AY485609_1(AY485609|pid:none) Amanita phalloides DNA-dependent R... 106 2e-21
AF107792_1(AF107792|pid:none) Microascus trigonosporus DNA-depen... 105 2e-21
DQ302793_1(DQ302793|pid:none) Rhizophydium macroporosum isolate ... 105 3e-21
AF107803_1(AF107803|pid:none) Curvularia brachyspora DNA-depende... 105 3e-21
DQ302774_1(DQ302774|pid:none) Cladochytrium replicatum isolate A... 105 3e-21
AY485619_1(AY485619|pid:none) Cryphonectria parasitica DNA-depen... 105 3e-21
DQ020659_1(DQ020659|pid:none) Chlamydomonas reinhardtii RNA poly... 105 3e-21
DQ158857_44(DQ158857|pid:none) Bigelowiella natans nucleomorph c... 105 3e-21
AF107807_1(AF107807|pid:none) Leotia viscosa DNA-dependent RNA p... 104 4e-21
AY485625_1(AY485625|pid:none) Melanomma radicans DNA-dependent R... 104 4e-21
AF107801_1(AF107801|pid:none) Mycosphaerella citrullina DNA-depe... 104 4e-21
AY786056_1(AY786056|pid:none) Fomitopsis pinicola RNA polymerase... 103 8e-21
AF107802_1(AF107802|pid:none) Botryosphaeria rhodina DNA-depende... 103 1e-20
AY485610_1(AY485610|pid:none) Aspergillus fumigatus DNA-dependen... 102 2e-20
AF107796_1(AF107796|pid:none) Exophiala jeanselmei DNA-dependent... 102 2e-20
AF107800_1(AF107800|pid:none) Dothidea insculpta DNA-dependent R... 102 2e-20
AF107790_1(AF107790|pid:none) Podospora anserina DNA-dependent R... 102 2e-20
AF107786_1(AF107786|pid:none) Neolecta vitellina DNA-dependent R... 102 2e-20
DQ302769_1(DQ302769|pid:none) Batrachochytrium dendrobatidis iso... 102 2e-20
DQ302782_1(DQ302782|pid:none) Smittium culisetae isolate AFTOL-I... 101 4e-20
AY485618_1(AY485618|pid:none) Coccodinium bartschii DNA-dependen... 101 4e-20
AJ437580_1(AJ437580|pid:none) Trypanosoma brucei brucei mRNA for... 100 8e-20
AY485638_1(AY485638|pid:none) Aureobasidium pullulans DNA-depend... 100 8e-20
AF107798_1(AF107798|pid:none) Capronia pilosella DNA-dependent R... 100 1e-19
AY563264_1(AY563264|pid:none) Selaginella densa RNA polymerase I... 100 1e-19
AY495590_1(AY495590|pid:none) Botryotinia fuckeliana RNA polymer... 100 1e-19
AY596740_1(AY596740|pid:none) Schizanthus pinnatus RNA polymeras... 100 1e-19
DQ385886_1(DQ385886|pid:none) Macrolepiota dolichaula isolate AF... 99 2e-19
AF107808_1(AF107808|pid:none) Sclerotinia sclerotiorum DNA-depen... 99 2e-19
AM712239_54(AM712239|pid:none) African swine fever virus Benin 9... 98 5e-19
(P0C8K3) RecName: Full=DNA-directed RNA polymerase subunit 2; ... 98 5e-19
AY699193_1(AY699193|pid:none) Macrozamia moorei RNA polymerase I... 97 7e-19
AE014186_339(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 97 7e-19
AF043426_1(AF043426|pid:none) Peperomia caperata RNA polymerase ... 97 7e-19
AY563267_1(AY563267|pid:none) Gnetum gnemon RNA polymerase II se... 97 9e-19
AY699197_1(AY699197|pid:none) Dioon edule RNA polymerase II seco... 97 9e-19
AY699220_1(AY699220|pid:none) Illicium anisatum RNA polymerase I... 97 9e-19
AF043427_1(AF043427|pid:none) Nymphaea odorata RNA polymerase II... 97 9e-19
AJ565858_1(AJ565858|pid:none) Escallonia sp. Oxelman 2340 partia... 97 1e-18
DQ011649_1(DQ011649|pid:none) Solanum lycopersicum RNA polymeras... 97 1e-18
AY699199_1(AY699199|pid:none) Welwitschia mirabilis RNA polymera... 97 1e-18
(P0C8K4) RecName: Full=DNA-directed RNA polymerase subunit 2; ... 97 1e-18
AY566626_1(AY566626|pid:none) Rhododendron macrophyllum RNA poly... 96 2e-18
AM712240_53(AM712240|pid:none) African swine fever virus OURT 88... 96 2e-18
AF020844_1(AF020844|pid:none) Marchantia polymorpha RPB140 (RPB2... 96 2e-18
AJ556782_1(AJ556782|pid:none) Tephrosia purpurea partial rpb2 ge... 96 2e-18
AY780933_1(AY780933|pid:none) Agaricostilbum hyphaenes isolate A... 96 2e-18
AY699204_1(AY699204|pid:none) Saxegothaea conspicua RNA polymera... 96 3e-18
AY699201_1(AY699201|pid:none) Araucaria araucana RNA polymerase ... 96 3e-18
AY699213_1(AY699213|pid:none) Metasequoia glyptostroboides RNA p... 96 3e-18
AF020839_1(AF020839|pid:none) Hordeum vulgare RPB140 (RPB2) mRNA... 95 3e-18
EF133465_63(EF133465|pid:none) Heliothis virescens ascovirus 3e,... 94 8e-18
DQ408129_1(DQ408129|pid:none) Peniophora nuda isolate AFTOL-ID 6... 94 1e-17
DQ645517_1(DQ645517|pid:none) Cryptococcus humicola isolate AFTO... 93 1e-17
DQ385881_1(DQ385881|pid:none) Clitocybe candicans isolate AFTOL-... 93 1e-17
DQ158858_47(DQ158858|pid:none) Bigelowiella natans nucleomorph c... 93 2e-17
AY699209_1(AY699209|pid:none) Cephalotaxus fortunei RNA polymera... 92 2e-17
DQ011645_1(DQ011645|pid:none) Lycopodium sp. JL-2005 RNA polymer... 92 3e-17
AY885161_1(AY885161|pid:none) Fibulorhizoctonia sp. LA082103L is... 92 3e-17
DQ302766_1(DQ302766|pid:none) Coelomomyces stegomyiae isolate AF... 92 4e-17
FJ932937_1(FJ932937|pid:none) Solanum hirtum clone 130005 At4g21... 91 5e-17
DQ839597_1(DQ839597|pid:none) Urocystis colchici isolate AFTOL-I... 91 9e-17
AF020842_1(AF020842|pid:none) Aristolochia gigantea RPB140 (RPB2... 91 9e-17
AJ634082_1(AJ634082|pid:none) Silene nivalis partial rpb2 gene f... 90 1e-16
AY786063_1(AY786063|pid:none) Pluteus romellii RNA polymerase II... 90 1e-16
DQ366279_1(DQ366279|pid:none) Aureoboletus thibetanus isolate AF... 90 1e-16
AJ557821_1(AJ557821|pid:none) Tragopogon sp. UW partial rpb2 gen... 89 3e-16
DQ789985_1(DQ789985|pid:none) Microbotryum violaceum isolate AFT... 89 3e-16
AY699191_1(AY699191|pid:none) Ceratozamia miqueliana RNA polymer... 89 3e-16
EF413630_1(EF413630|pid:none) Ceramothyrium carniolicum isolate ... 88 4e-16
AY584690_1(AY584690|pid:none) Trypethelium sp. DUKE 0000007 isol... 88 6e-16
AY641027_1(AY641027|pid:none) Athelia bombacina DNA-dependent RN... 87 1e-15
AY699194_1(AY699194|pid:none) Microcycas calocoma RNA polymerase... 87 1e-15
AY803748_1(AY803748|pid:none) Fomitiporia mediterranea isolate A... 87 1e-15
DQ782864_1(DQ782864|pid:none) Anisomeridium polypori isolate AFT... 86 2e-15
AY699186_1(AY699186|pid:none) Dicksonia antarctica RNA polymeras... 86 2e-15
AY485628_1(AY485628|pid:none) Opegrapha varia DNA-dependent RNA ... 86 3e-15
DQ663690_1(DQ663690|pid:none) Entyloma calendulae isolate AFTOL-... 85 4e-15
AY485620_1(AY485620|pid:none) Filobasidiella neoformans DNA-depe... 85 4e-15
DQ645530_1(DQ645530|pid:none) Entyloma arnoseridis isolate AFTOL... 85 4e-15
BT060823_1(BT060823|pid:none) Zea mays full-length cDNA clone ZM... 85 4e-15
AY485631_1(AY485631|pid:none) Pneumocystis carinii DNA-dependent... 85 4e-15
DQ381845_1(DQ381845|pid:none) Dacrymyces sp. FPL8953 RNA polymer... 85 5e-15
AY218480_1(AY218480|pid:none) Dacrymyces chrysospermus strain FP... 85 5e-15
DQ472713_1(DQ472713|pid:none) Fistulina antarctica isolate AFTOL... 84 6e-15
AY641035_1(AY641035|pid:none) Dermatocarpon luridum DNA-dependen... 84 8e-15
EF413622_1(EF413622|pid:none) Eupenicillium javanicum isolate AF... 84 8e-15
DQ472720_1(DQ472720|pid:none) Hygrophorus auratocephalus isolate... 84 8e-15
AY584682_1(AY584682|pid:none) Acarosporina microspora isolate AF... 84 1e-14
DQ472716_1(DQ472716|pid:none) Gymnopus contrarius isolate AFTOL-... 84 1e-14
DQ782866_1(DQ782866|pid:none) Roccella fuciformis isolate AFTOL-... 84 1e-14
DQ472719_1(DQ472719|pid:none) Hemimycena gracilis isolate AFTOL-... 84 1e-14
DQ470827_1(DQ470827|pid:none) Baeospora myosura isolate AFTOL-ID... 84 1e-14
DQ470831_1(DQ470831|pid:none) Cheimonophyllum candidissimum isol... 84 1e-14
FJ469670_1(FJ469670|pid:none) Arthonia caesia isolate AFTOL-ID 7... 83 1e-14
AY641061_1(AY641061|pid:none) Petractis luetkemuelleri DNA-depen... 83 1e-14
DQ472721_1(DQ472721|pid:none) Hydnopolyporus fimbriatus isolate ... 83 1e-14
DQ234555_1(DQ234555|pid:none) Rhodotorula hordea isolate AFTOL-I... 83 1e-14
DQ472726_1(DQ472726|pid:none) Camarophyllopsis hymenocephala iso... 83 1e-14
AJ557240_1(AJ557240|pid:none) Ilex x meserveae partial rpb2 gene... 83 2e-14
AY641060_1(AY641060|pid:none) Gyalecta hypoleuca DNA-dependent R... 83 2e-14
DQ058632_1(DQ058632|pid:none) Platanus orientalis RNA polymerase... 82 2e-14
AY566618_1(AY566618|pid:none) Platanus orientalis RNA polymerase... 82 2e-14
DQ883749_1(DQ883749|pid:none) Lobaria scrobiculata isolate AFTOL... 82 2e-14
AY641033_1(AY641033|pid:none) Cudonia circinans DNA-dependent RN... 82 2e-14
DQ058630_1(DQ058630|pid:none) Eschscholzia californica RNA polym... 82 3e-14
AY699196_1(AY699196|pid:none) Zamia integrifolia RNA polymerase ... 82 3e-14
AY699221_1(AY699221|pid:none) Dianthus sp. UWG RNA polymerase II... 82 3e-14
DQ883755_1(DQ883755|pid:none) Diploschistes cinereocaesius isola... 82 3e-14
DQ017132_1(DQ017132|pid:none) Tetracentron sinense RNA polymeras... 82 3e-14
DQ017099_1(DQ017099|pid:none) Dianthus caryophyllus RNA polymera... 82 3e-14
AY699192_1(AY699192|pid:none) Encephalartos barteri RNA polymera... 82 3e-14
DQ017096_1(DQ017096|pid:none) Cissus tuberosa RNA polymerase II ... 82 4e-14
AY641042_1(AY641042|pid:none) Graphina poitiaei DNA-dependent RN... 82 4e-14
DQ017133_1(DQ017133|pid:none) Vitis piasezkii RNA polymerase II ... 82 4e-14
AJ558240_1(AJ558240|pid:none) Convolvulus arvensis partial rpb2 ... 82 4e-14
AY641052_1(AY641052|pid:none) Lobaria quercizans DNA-dependent R... 82 4e-14
AY641043_1(AY641043|pid:none) Gyalecta jenensis DNA-dependent RN... 82 4e-14
DQ912397_1(DQ912397|pid:none) Uncultured ascomycete RNA polymera... 82 4e-14
AJ565861_1(AJ565861|pid:none) Evolvulus sp. Stefanovic s.n. part... 82 4e-14
AJ634069_1(AJ634069|pid:none) Lychnis coronaria partial rpb2 gen... 82 4e-14
AY566623_1(AY566623|pid:none) Liquidambar acalycina RPB140 (RPB2... 82 4e-14
DQ017092_1(DQ017092|pid:none) Callistemon subulatus RNA polymera... 81 5e-14
AY641083_1(AY641083|pid:none) Taphrina communis DNA-dependent RN... 81 5e-14
AF107789_1(AF107789|pid:none) Neurospora crassa DNA-dependent RN... 81 5e-14
AJ555916_1(AJ555916|pid:none) Alangium platanifolium partial rpb... 81 5e-14
AY699185_1(AY699185|pid:none) Cryptogramma crispa RNA polymerase... 81 7e-14
DQ912390_1(DQ912390|pid:none) Vulpicida pinastri isolate AFTOL-I... 81 7e-14
DQ912387_1(DQ912387|pid:none) Parmotrema reticulatum isolate AFT... 81 7e-14
AY641029_1(AY641029|pid:none) Acarospora clauzadeana DNA-depende... 81 7e-14
AY641067_1(AY641067|pid:none) Pyrenula cruenta DNA-dependent RNA... 81 7e-14
AY641045_1(AY641045|pid:none) Gyromitra esculenta DNA-dependent ... 81 7e-14
AJ557265_1(AJ557265|pid:none) Escallonia sp. Oxelman 2340 partia... 81 7e-14
DQ912389_1(DQ912389|pid:none) Punctelia rudecta isolate AFTOL-ID... 81 7e-14
AY641054_1(AY641054|pid:none) Morchella esculenta DNA-dependent ... 81 7e-14
DQ782863_1(DQ782863|pid:none) Dermatocarpon miniatum isolate AFT... 81 7e-14
AJ634168_1(AJ634168|pid:none) Silene keiskei partial rpa2 gene f... 81 7e-14
AY641064_1(AY641064|pid:none) Pleopsidium chlorophanum DNA-depen... 80 9e-14
AY641077_1(AY641077|pid:none) Sporastatia testudinea DNA-depende... 80 9e-14
DQ883748_1(DQ883748|pid:none) Crocynia pyxinoides isolate AFTOL-... 80 9e-14
AY641025_1(AY641025|pid:none) Acarospora macrospora subsp. macro... 80 9e-14
AY641081_1(AY641081|pid:none) Strangospora pinicola DNA-dependen... 80 9e-14
AY699211_1(AY699211|pid:none) Thuja plicata RNA polymerase II se... 80 9e-14
AY699179_1(AY699179|pid:none) Equisetum hyemale RNA polymerase I... 80 1e-13
AY584686_1(AY584686|pid:none) Ostropa barbara isolate AFTOL-ID 7... 80 1e-13
AJ556175_1(AJ556175|pid:none) Cornus kousa partial rpb2 gene for... 80 1e-13
AJ634169_1(AJ634169|pid:none) Silene keiskei partial rpa2 gene f... 80 1e-13
DQ782871_1(DQ782871|pid:none) Lecanora hybocarpa isolate AFTOL-I... 80 1e-13
DQ525467_1(DQ525467|pid:none) Pleopsidium cf. chlorophanum Riefn... 80 1e-13
DQ883758_1(DQ883758|pid:none) Pyxine subcinerea isolate AFTOL-ID... 80 1e-13
AF325870_1(AF325870|pid:none) Staphylococcus lugdunensis RNA pol... 80 1e-13
DQ525461_1(DQ525461|pid:none) Pleopsidium chlorophanum voucher H... 80 1e-13
AY641024_1(AY641024|pid:none) Acarospora laqueata DNA-dependent ... 80 1e-13
DQ525471_2(DQ525471|pid:none) Pleopsidium sp. Zhurbenko 92515 DN... 80 1e-13
AY641075_1(AY641075|pid:none) Sphaerophorus globosus DNA-depende... 80 2e-13
DQ248315_1(DQ248315|pid:none) Symbiotaphrina buchneri voucher JC... 80 2e-13
AY699206_1(AY699206|pid:none) Torreya californica RNA polymerase... 80 2e-13
DQ912391_1(DQ912391|pid:none) Buellia stillingiana isolate AFTOL... 80 2e-13
AY699180_1(AY699180|pid:none) Isoetes sp. JZ73 RNA polymerase II... 80 2e-13
DQ782867_1(DQ782867|pid:none) Mycoblastus sanguinarius isolate A... 80 2e-13
AY641032_1(AY641032|pid:none) Coenogonium leprieurii DNA-depende... 80 2e-13
AY641044_1(AY641044|pid:none) Gyalecta ulmi DNA-dependent RNA po... 80 2e-13
AY641031_1(AY641031|pid:none) Calicium viride DNA-dependent RNA ... 79 2e-13
DQ782875_1(DQ782875|pid:none) Hypocenomyce scalaris isolate AFTO... 79 2e-13
AY641070_1(AY641070|pid:none) Rhytisma acerinum DNA-dependent RN... 79 2e-13
DQ912392_1(DQ912392|pid:none) Phaeophyscia orbicularis isolate A... 79 2e-13
DQ912393_1(DQ912393|pid:none) Physconia muscigena isolate AFTOL-... 79 2e-13
AY333314_1(AY333314|pid:none) Phaeomarasmius proximans isolate A... 79 2e-13
AY333311_1(AY333311|pid:none) Crepidotus cf. applanatus PBM 717 ... 79 2e-13
DQ912396_1(DQ912396|pid:none) Degelia plumbea isolate AFTOL-ID 9... 79 2e-13
AJ629279_1(AJ629279|pid:none) Agrostemma githago partial rpa2 ge... 79 2e-13
DQ883750_1(DQ883750|pid:none) Pseudocyphellaria anomala isolate ... 79 2e-13
DQ883762_1(DQ883762|pid:none) Ramalina complanata isolate AFTOL-... 79 2e-13
DQ883761_1(DQ883761|pid:none) Megalospora tuberculosa isolate AF... 79 3e-13
AY641050_1(AY641050|pid:none) Lempholemma polyanthes DNA-depende... 79 3e-13
(Q2S1Q5) RecName: Full=DNA-directed RNA polymerase subunit beta;... 79 3e-13
(A6QEJ4) RecName: Full=DNA-directed RNA polymerase subunit beta;... 79 3e-13
(Q4L3K3) RecName: Full=DNA-directed RNA polymerase subunit beta;... 79 3e-13
(Q932F8) RecName: Full=DNA-directed RNA polymerase subunit beta;... 79 3e-13
(Q5HRL0) RecName: Full=DNA-directed RNA polymerase subunit beta;... 79 3e-13
CP000159_1718(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 79 3e-13
(Q6GJC6) RecName: Full=DNA-directed RNA polymerase subunit beta;... 79 3e-13
DQ782868_1(DQ782868|pid:none) Pertusaria dactylina isolate AFTOL... 79 3e-13
(A5IQ96) RecName: Full=DNA-directed RNA polymerase subunit beta;... 79 3e-13
(Q5HID3) RecName: Full=DNA-directed RNA polymerase subunit beta;... 79 3e-13
CP000253_488(CP000253|pid:none) Staphylococcus aureus subsp. aur... 79 3e-13
AY641046_1(AY641046|pid:none) Peltula umbilicata DNA-dependent R... 79 3e-13
T43701(T43701) DNA-directed RNA polymerase (EC 2.7.7.6) II large... 79 3e-13
AY641048_1(AY641048|pid:none) Lasallia pennsylvanica DNA-depende... 79 3e-13
AY641056_1(AY641056|pid:none) Peltigera canina DNA-dependent RNA... 79 3e-13
(Q4A5S7) RecName: Full=DNA-directed RNA polymerase subunit beta;... 79 3e-13
AF325871_1(AF325871|pid:none) Staphylococcus saccharolyticus RNA... 79 3e-13
DQ525464_1(DQ525464|pid:none) Pleopsidium flavum voucher Reeb VR... 79 3e-13
AY584687_1(AY584687|pid:none) Parmotrema tinctorum isolate AFTOL... 79 3e-13
DQ912386_1(DQ912386|pid:none) Parmotrema austrosinense isolate A... 79 3e-13
AY641041_1(AY641041|pid:none) Glypholecia scabra DNA-dependent R... 78 4e-13
DQ525466_1(DQ525466|pid:none) Pleopsidium flavum voucher Reeb VR... 78 4e-13
>AK001161_1(AK001161|pid:none) Homo sapiens cDNA FLJ10299 fis, clone
NT2RM2000013, moderately similar to DNA-DIRECTED RNA
POLYMERASE III 128 KD POLYPEPTIDE (EC 2.7.7.6).
&AX876125_1(AX876125|pid:none)
Length = 343
Score = 288 bits (737), Expect = 2e-76
Identities = 133/207 (64%), Positives = 160/207 (77%)
Frame = +1
Query: 403 GICPDIIMNLHGFPSRMTIGKMIELLAGKAGVLSGKFGFGTCFGGDRVENISKVLISKGF 582
GICPDIIMN HGFPSRMT+GK+IELLAGKAGVL G+F +GT FGG +V+++ + L+ G+
Sbjct: 132 GICPDIIMNPHGFPSRMTVGKLIELLAGKAGVLDGRFHYGTAFGGSKVKDVCEDLVCHGY 191
Query: 583 SYGGKDYVTSGVTGEPLACFIFFGPIFYQKLKHMVMDKMHXRXRGPTVTLTRQPTXXXXX 762
+Y GKDYVTSG+TGEPL +I+FGP++YQKLKHMV+DKMH R RGP LTRQPT
Sbjct: 192 NYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSR 251
Query: 763 XXXXXXXXXXXDCLIGYGASALIMERLMXSSDRFTVYACKNCGFXGYEGYCQYCKSSVDI 942
DCLIGYGAS L++ERLM SSD F V C CG GY G+C YCKSS +
Sbjct: 252 DGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCGQCGLLGYSGWCHYCKSSCHV 311
Query: 943 STIQIPYACKLLFQELQAMNIVPRLKL 1023
S+++IPYACKLLFQELQ+MNI+PRLKL
Sbjct: 312 SSLRIPYACKLLFQELQSMNIIPRLKL 338
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,187,335,006
Number of extensions: 23195908
Number of successful extensions: 63364
Number of sequences better than 10.0: 2235
Number of HSP's gapped: 62361
Number of HSP's successfully gapped: 2262
Length of query: 344
Length of database: 1,051,180,864
Length adjustment: 129
Effective length of query: 215
Effective length of database: 633,664,753
Effective search space: 136237921895
Effective search space used: 136237921895
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
1 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |