Contig-U12436-1
Contig ID Contig-U12436-1
Contig update 2002.12.18
Contig sequence
>Contig-U12436-1 (Contig-U12436-1Q) /CSM_Contig/Contig-U12436-1Q.Seq.d
ATTTTCTTTTTTTTATTTTTCTATCTTTATTAAAAATAGTAAAATTTAAA
TAATACAATTATTTGTTTTTATTATTATTAAAAATAAAGATGAAAACTAC
AAATGTAAAAAATAATAATAATAATATTAATAATACAGATGAAGAAATTA
AAATAAAAAATAATTATAATCAAAATGATGAAAGATTAAAAAAAATTAAA
GAAAATAAATTTGATTGGGCATTATTTAAGAGATTTATAAATATTATAAA
AATTTTATATGCTAAACCTGTGATTCCATTAACTTTATTTTTAATATTAT
TTGGTAATGGATTTGCACAAACTTATGTTTCAAAGTTCACAGGTATTTTA
TTAGCAGATATTTATGCATCATTTACAAGTGGTGATAAAGTTTTTTTCTT
ATCATCAGTTTTAAAAGCAGGTTTTGCAATTGGTGGTAGTGCATTGTTGG
CTGCAATCATTAATTTCATCGTTAGTATAATGGCATGGAATTGGAGGAAA
ACTTTATGTTTATACATTCAAAATGTTTATTTCAAAAAATCATTATTCTA
CAAGATATTAGCATTTGATGATAGAATTGATAATCCAGATCAACGTATAA
CATCTGATATTGATAATTTCACAACACTATTAGCGTCAATTGTATCTCAA
TGTATCACTGGTCNNNNNNNNN----------NNNNNNNNNNATCAATTA
TATTCTAAAATTTCAATTAATGTTAAAAGAGGAAATAATTTATTAATAAT
GGGACCAAGTGGTTCAGGTAAATCATCATTAATTAGAATTATTAATGGAT
TATGGCCATTTTTTAAAGGTAGTATTGATAGACCAGAGAATGGTGATATG
TTTTTCTTACCACAACAACCATATTTAATATTTGGTACTTTAGAAGAACA
AATTCTATATCCATTTAGTAAAAAACAAAAAAGAATTCCAAAATCAATAA
TGAGAGAATTATTCCAAAGATTTGAAATTGATTATTTATTAGATCGTGAA
AGATTCATTAAAAAGAGTGCTCAAGTTAATGATCTCACTCATAATTGGTT
AAATCAATTATCACCAGGTGAACAACAATTAATTGCAATTATTAGATTAA
TCTATCATAAACCTAAATTCGCTTTAATGGATGAATCTACAAGTTCAATT
CCTCAATCACTTGAAGAACGTGTTTACTATGTTGCAAAAGAATTAGGAAT
AACAATCATTAGTGTTGGTCATCGTATTTCACTTTTAAAATATCATTCAA
CTTTATTAAGATTTGATAAAGATAAAAATTGGTACCTTGAAGATATAATT
AATCAAAACAATCAATCAAATAATATTAATAATAATAATAATAATAATAC
AAATAAAATAGCTGAGGATTC

Gap gap included
Contig length 1361
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 2735980
End point 2734631
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 2
Link to clone list U12436
List of clone(s)

est1=VHE231F,1,663
est2=VHE231Z,664,1343
Translated Amino Acid sequence
flffiflsllkivkfk*YNYLFLLLLKIKMKTTNVKNNNNNINNTDEEIKIKNNYNQNDE
RLKKIKENKFDWALFKRFINIIKILYAKPVIPLTLFLILFGNGFAQTYVSKFTGILLADI
YASFTSGDKVFFLSSVLKAGFAIGGSALLAAIINFIVSIMAWNWRKTLCLYIQNVYFKKS
LFYKILAFDDRIDNPDQRITSDIDNFTTLLASIVSQCITGXXX---

---XXXXQLYSKISINVKRGNNLLIMGPSGSGKSSLIRIINGLWPFFKGSIDRPENGDMF
FLPQQPYLIFGTLEEQILYPFSKKQKRIPKSIMRELFQRFEIDYLLDRERFIKKSAQVND
LTHNWLNQLSPGEQQLIAIIRLIYHKPKFALMDESTSSIPQSLEERVYYVAKELGITIIS
VGHRISLLKYHSTLLRFDKDKNWYLEDIINQNNQSNNINNNNNNNTNKIAED


Translated Amino Acid sequence (All Frames)
Frame A:
iffflffyly*k**nlnntiicfyyy*k*r*klqm*kiiiiiliiqmkklk*kiiiikmm
kd*kklkkinlighylrdl*il*kfymlnl*fh*lyf*yylvmdlhklmfqssqvfy*qi
fmhhlqvvikffsyhqf*kqvlqlvvvhcwlqslisslv*whgiggklyvytfkmfiskn
hystry*hlmieliiqinv*hliliisqhy*rqlylnvslvxxx---

---XXXXQLYSKISINVKRGNNLLIMGPSGSGKSSLIRIINGLWPFFKGSIDRPENGDMF
FLPQQPYLIFGTLEEQILYPFSKKQKRIPKSIMRELFQRFEIDYLLDRERFIKKSAQVND
LTHNWLNQLSPGEQQLIAIIRLIYHKPKFALMDESTSSIPQSLEERVYYVAKELGITIIS
VGHRISLLKYHSTLLRFDKDKNWYLEDIINQNNQSNNINNNNNNNTNKIAED

Frame B:
fsffyfsifiknski*iiqlfvfiiiknkdenykckk****y**yr*rn*nkk*l*sk**
kikkn*rk*i*lgii*eiykyyknfic*tcdsinfifniiw*wictnlcfkvhryfisry
lciiykw**sffliisfksrfcnww*civgcnh*fhr*yngmeleenfmfihskclfqki
iilqdisi***n**srstyni*y**fhntisvncismyhwsxx---

---xxxinyilkfqlmlkeeiiy**wdqvvqvnhh*lellmdyghflkvvlidqrmvicf
syhnnhi*ylvl*knkfyihlvknkkefqnq**enyskdlkliiy*ivkdslkrvlklmi
sliig*inyhqvnnn*lqlld*siinlnsl*wmnlqvqflnhlknvftmlqkn*e*qslv
lvivfhf*niiqly*dlikikigtlki*liktinqiiliiiiiiiqik*lri

Frame C:
flffiflsllkivkfk*YNYLFLLLLKIKMKTTNVKNNNNNINNTDEEIKIKNNYNQNDE
RLKKIKENKFDWALFKRFINIIKILYAKPVIPLTLFLILFGNGFAQTYVSKFTGILLADI
YASFTSGDKVFFLSSVLKAGFAIGGSALLAAIINFIVSIMAWNWRKTLCLYIQNVYFKKS
LFYKILAFDDRIDNPDQRITSDIDNFTTLLASIVSQCITGXXX---

---xxxsiif*nfn*c*krk*finngtkwfr*iiin*ny*wimaif*r*y**trew*yvf
lttttifniwyfrrtnsisi**ktkknskinneriipki*n*lfirs*kih*kecss**s
hs*lvksiitr*ttincny*inls*t*irfng*iykfnssit*rtcllcckrirnnnh*c
wssyftfkisfnfiki**r*klvp*ryn*skqsik*y*******yk*ns*gf

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U12436-1 (Contig-U12436-1Q)
/CSM_Contig/Contig-U12436-1Q.Seq.d
(1371 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U12436-1 (Contig-U12436-1Q) /CSM_Contig/Conti... 886 0.0
Contig-U13413-1 (Contig-U13413-1Q) /CSM_Contig/Conti... 48 3e-05
Contig-U11124-1 (Contig-U11124-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U07000-1 (Contig-U07000-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U09598-1 (Contig-U09598-1Q) /CSM_Contig/Conti... 38 0.025
Contig-U03678-1 (Contig-U03678-1Q) /CSM_Contig/Conti... 38 0.025
Contig-U14392-1 (Contig-U14392-1Q) /CSM_Contig/Conti... 36 0.097
Contig-U09506-1 (Contig-U09506-1Q) /CSM_Contig/Conti... 36 0.097
Contig-U09041-1 (Contig-U09041-1Q) /CSM_Contig/Conti... 36 0.097
Contig-U06386-1 (Contig-U06386-1Q) /CSM_Contig/Conti... 36 0.097

>Contig-U12436-1 (Contig-U12436-1Q) /CSM_Contig/Contig-U12436-1Q.Seq.d
Length = 1371

Score = 886 bits (447), Expect = 0.0
Identities = 461/468 (98%)
Strand = Plus / Plus


Query: 196 ttaaagaaaataaatttgattgggcattatttaagagatttataaatattataaaaattt 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 ttaaagaaaataaatttgattgggcattatttaagagatttataaatattataaaaattt 255


Query: 256 tatatgctaaacctgtgattccattaactttatttttaatattatttggtaatggatttg 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tatatgctaaacctgtgattccattaactttatttttaatattatttggtaatggatttg 315


Query: 316 cacaaacttatgtttcaaagttcacaggtattttattagcagatatttatgcatcattta 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 cacaaacttatgtttcaaagttcacaggtattttattagcagatatttatgcatcattta 375


Query: 376 caagtggtgataaagnnnnnnncttatcatcagttttaaaagcaggttttgcaattggtg 435
||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 376 caagtggtgataaagtttttttcttatcatcagttttaaaagcaggttttgcaattggtg 435


Query: 436 gtagtgcattgttggctgcaatcattaatttcatcgttagtataatggcatggaattgga 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gtagtgcattgttggctgcaatcattaatttcatcgttagtataatggcatggaattgga 495


Query: 496 ggaaaactttatgtttatacattcaaaatgtttatttcaaaaaatcattattctacaaga 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ggaaaactttatgtttatacattcaaaatgtttatttcaaaaaatcattattctacaaga 555


Query: 556 tattagcatttgatgatagaattgataatccagatcaacgtataacatctgatattgata 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tattagcatttgatgatagaattgataatccagatcaacgtataacatctgatattgata 615


Query: 616 atttcacaacactattagcgtcaattgtatctcaatgtatcactggtc 663
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 atttcacaacactattagcgtcaattgtatctcaatgtatcactggtc 663


Score = 714 bits (360), Expect = 0.0
Identities = 360/360 (100%)
Strand = Plus / Plus


Query: 933 gaattccaaaatcaataatgagagaattattccaaagatttgaaattgattatttattag 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 gaattccaaaatcaataatgagagaattattccaaagatttgaaattgattatttattag 992


Query: 993 atcgtgaaagattcattaaaaagagtgctcaagttaatgatctcactcataattggttaa 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993 atcgtgaaagattcattaaaaagagtgctcaagttaatgatctcactcataattggttaa 1052


Query: 1053 atcaattatcaccaggtgaacaacaattaattgcaattattagattaatctatcataaac 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 atcaattatcaccaggtgaacaacaattaattgcaattattagattaatctatcataaac 1112


Query: 1113 ctaaattcgctttaatggatgaatctacaagttcaattcctcaatcacttgaagaacgtg 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1113 ctaaattcgctttaatggatgaatctacaagttcaattcctcaatcacttgaagaacgtg 1172


Query: 1173 tttactatgttgcaaaagaattaggaataacaatcattagtgttggtcatcgtatttcac 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1173 tttactatgttgcaaaagaattaggaataacaatcattagtgttggtcatcgtatttcac 1232


Query: 1233 ttttaaaatatcattcaactttattaagatttgataaagataaaaattggtaccttgaag 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1233 ttttaaaatatcattcaactttattaagatttgataaagataaaaattggtaccttgaag 1292


Score = 450 bits (227), Expect = e-126
Identities = 227/227 (100%)
Strand = Plus / Plus


Query: 693 atcaattatattctaaaatttcaattaatgttaaaagaggaaataatttattaataatgg 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 atcaattatattctaaaatttcaattaatgttaaaagaggaaataatttattaataatgg 752


Query: 753 gaccaagtggttcaggtaaatcatcattaattagaattattaatggattatggccatttt 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 gaccaagtggttcaggtaaatcatcattaattagaattattaatggattatggccatttt 812


Query: 813 ttaaaggtagtattgatagaccagagaatggtgatatgtttttcttaccacaacaaccat 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 ttaaaggtagtattgatagaccagagaatggtgatatgtttttcttaccacaacaaccat 872


Query: 873 atttaatatttggtactttagaagaacaaattctatatccatttagt 919
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 atttaatatttggtactttagaagaacaaattctatatccatttagt 919


Score = 34.2 bits (17), Expect = 0.38
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 84 ataaagatgaaaactac 100
|||||||||||||||||
Sbjct: 84 ataaagatgaaaactac 100


Score = 30.2 bits (15), Expect = 6.0
Identities = 18/19 (94%)
Strand = Plus / Minus


Query: 285 ttatttttaatattatttg 303
||||| |||||||||||||
Sbjct: 1335 ttattattaatattatttg 1317


>Contig-U13413-1 (Contig-U13413-1Q) /CSM_Contig/Contig-U13413-1Q.Seq.d
Length = 785

Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus


Query: 1252 tttattaagatttgataaagataa 1275
||||||||||||||||||||||||
Sbjct: 348 tttattaagatttgataaagataa 371


>Contig-U11124-1 (Contig-U11124-1Q) /CSM_Contig/Contig-U11124-1Q.Seq.d
Length = 1715

Score = 40.1 bits (20), Expect = 0.006
Identities = 29/32 (90%)
Strand = Plus / Minus


Query: 287 atttttaatattatttggtaatggatttgcac 318
|||| ||||||| |||||||||||| ||||||
Sbjct: 1333 atttgtaatattctttggtaatggaattgcac 1302


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 23,100
Number of Sequences: 6905
Number of extensions: 23100
Number of successful extensions: 2886
Number of sequences better than 10.0: 347
length of query: 1371
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1355
effective length of database: 5,564,391
effective search space: 7539749805
effective search space used: 7539749805
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.30
Homology vs DNA
Query= Contig-U12436-1 (Contig-U12436-1Q) /CSM_Contig/Contig-U12436-1Q.Seq.d
(1371 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AY077632) Dictyostelium discoideum ABC transporter ABCD.1 a... 714 0.0 2
(BJ439093) Dictyostelium discoideum cDNA clone:ddv39m08, 3' ... 714 0.0 2
(BJ420470) Dictyostelium discoideum cDNA clone:ddv39m08, 5' ... 527 0.0 2
(CP000551) Prochlorococcus marinus str. AS9601, complete gen... 58 0.001 1
(CP000111) Prochlorococcus marinus str. MIT 9312, complete g... 58 0.001 1
(CP000825) Prochlorococcus marinus str. MIT 9215, complete g... 56 0.004 1
(AE017245) Mycoplasma synoviae 53, complete genome. 40 0.028 18
(EJ042358) 1095454099115 Global-Ocean-Sampling_GS-26-01-01-1... 52 0.057 1
(EJ023685) 1095454012079 Global-Ocean-Sampling_GS-26-01-01-1... 52 0.057 1
(EA102623) Sequence 6 from patent US 7195870. 50 0.22 1
(AX323526) Sequence 14 from Patent WO0192565. 50 0.22 1
(AX277843) Sequence 6 from Patent WO0177375. 50 0.22 1
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 36 0.24 16
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 36 0.25 15
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 32 0.28 20
(EK388829) 1095469493232 Global-Ocean-Sampling_GS-31-01-01-1... 36 0.64 2
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp... 36 0.67 19
(DL079454) Enterococcus antigens. 44 0.74 2
(CQ969451) Sequence 26 from Patent WO2004106367. 44 0.74 2
(AF076972) Dictyostelium discoideum calcium-binding protein ... 48 0.89 1
(AL158157) Human DNA sequence from clone RP11-413D24 on chro... 48 0.89 1
(CU618337) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.89 1
(AC018407) Homo sapiens clone RP11-17D4, WORKING DRAFT SEQUE... 48 0.89 1
(AC016003) Homo sapiens clone RP11-23I9, WORKING DRAFT SEQUE... 48 0.89 1
(EJ559461) 1092959536423 Global-Ocean-Sampling_GS-29-01-01-1... 48 0.89 1
(EJ407555) 1093012107099 Global-Ocean-Sampling_GS-28-01-01-1... 48 0.89 1
(EJ314808) 1095403270199 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.89 1
(AU060745) Dictyostelium discoideum slug cDNA, clone SLB331. 48 0.89 1
(AU052443) Dictyostelium discoideum slug cDNA, clone SLD326. 48 0.89 1
(AU052213) Dictyostelium discoideum slug cDNA, clone SLA255. 48 0.89 1
(AU052211) Dictyostelium discoideum slug cDNA, clone SLA250. 48 0.89 1
(AU052132) Dictyostelium discoideum slug cDNA, clone SLA585. 48 0.89 1
(AU040087) Dictyostelium discoideum slug cDNA, clone SLA389. 48 0.89 1
(AU037431) Dictyostelium discoideum slug cDNA, clone SSD632. 48 0.89 1
(AU034308) Dictyostelium discoideum slug cDNA, clone SLC556. 48 0.89 1
(AU033894) Dictyostelium discoideum slug cDNA, clone SLB579. 48 0.89 1
(AU033859) Dictyostelium discoideum slug cDNA, clone SLB530. 48 0.89 1
(AU033847) Dictyostelium discoideum slug cDNA, clone SLB516. 48 0.89 1
(AU033831) Dictyostelium discoideum slug cDNA, clone SLB493. 48 0.89 1
(AU033775) Dictyostelium discoideum slug cDNA, clone SLB425. 48 0.89 1
(AU033724) Dictyostelium discoideum slug cDNA, clone SLB362. 48 0.89 1
(AU033479) Dictyostelium discoideum slug cDNA, clone SLA876. 48 0.89 1
(C92744) Dictyostelium discoideum slug cDNA, clone SSF182. 48 0.89 1
(C92092) Dictyostelium discoideum slug cDNA, clone SSD410. 48 0.89 1
(C90205) Dictyostelium discoideum slug cDNA, clone SSI246. 48 0.89 1
(C90136) Dictyostelium discoideum slug cDNA, clone SSI132. 48 0.89 1
(C25546) Dictyostelium discoideum slug cDNA, clone SLA245. 48 0.89 1
(C25543) Dictyostelium discoideum slug cDNA, clone SLA239. 48 0.89 1
(C24671) Dictyostelium discoideum slug cDNA, clone SL-X075. 48 0.89 1
(BJ397199) Dictyostelium discoideum cDNA clone:dds45n07, 5' ... 48 0.89 1
(BJ331706) Dictyostelium discoideum cDNA clone:dda36b19, 5' ... 48 0.89 1
(CP000395) Borrelia afzelii PKo, complete genome. 48 0.89 1
(BD061520) Genome DNA of symbiotic bacteria of aphid. 38 0.91 11
(AR409405) Sequence 1 from patent US 6632935. 38 0.91 11
(BA000003) Buchnera aphidicola str. APS (Acyrthosiphon pisum... 38 0.91 11
(AM090253) Lutzomyia longipalpis EST clone NSFM-143d09, sequ... 44 1.4 2
(AX076880) Sequence 1 from Patent WO0107635. 38 1.7 4
(AR569253) Sequence 1 from patent US 6762285. 38 1.7 4
(CP000361) Arcobacter butzleri RM4018, complete genome. 36 1.8 21
(AC115604) Dictyostelium discoideum chromosome 2 map 4354771... 34 1.9 7
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 36 1.9 14
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 32 2.0 14
(CR954198) Medicago truncatula chromosome 5 clone mte1-67f21... 36 2.2 7
(DI046975) Enterococcus faecalis polynucleotides and polypep... 44 2.4 2
(BD193414) Enterococcus faecialis polynucleotides and polype... 44 2.4 2
(CO893084) BovGen_21409 normal cattle brain Bos taurus cDNA ... 44 2.7 2
(BM275785) PfESToaa85f05.y1 Plasmodium falciparum 3D7 gameto... 36 2.8 2
(AM454754) Vitis vinifera contig VV78X038194.9, whole genome... 38 3.0 4
(EK235495) 1095460198245 Global-Ocean-Sampling_GS-31-01-01-1... 38 3.2 2
(EK149649) 1095456042222 Global-Ocean-Sampling_GS-31-01-01-1... 34 3.3 3
(EF037015) Synthetic construct Bacillus anthracis clone FLH2... 32 3.4 4
(AL139249) Human DNA sequence from clone RP4-604L7 on chromo... 44 3.5 2
(DQ396875) Scenedesmus obliquus strain UTEX 393 chloroplast,... 46 3.5 1
(AY382812) Tulasnella tomaculum strain KC429 large subunit r... 46 3.5 1
(AP008216) Oryza sativa (japonica cultivar-group) genomic DN... 46 3.5 1
(AC210382) Populus trichocarpa clone POP018-P22, complete se... 46 3.5 1
(AC092173) Oryza sativa Japonica Group chromosome 10 clone O... 46 3.5 1
(AC083944) Genomic sequence for Oryza sativa, Nipponbare str... 46 3.5 1
(AB070448) Dictyostelium discoideum cbpF mRNA for calcium bi... 46 3.5 1
(AC097595) Rattus norvegicus clone CH230-34H15, *** SEQUENCI... 46 3.5 1
(CU466519) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.5 1
(CU075490) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.5 1
(AC167808) Bos taurus clone CH240-214L21, WORKING DRAFT SEQU... 46 3.5 1
(ER543883) 1093016096989 Global-Ocean-Sampling_GS-35-01-01-1... 46 3.5 1
(EJ104926) 1092343133023 Global-Ocean-Sampling_GS-27-01-01-1... 46 3.5 1
(CE331748) tigr-gss-dog-17000333992127 Dog Library Canis lup... 46 3.5 1
(AU038815) Dictyostelium discoideum slug cDNA, clone SSL518. 46 3.5 1
(AU036951) Dictyostelium discoideum slug cDNA, clone SSB863. 46 3.5 1
(C94440) Dictyostelium discoideum slug cDNA, clone SSK806. 46 3.5 1
(C93180) Dictyostelium discoideum slug cDNA, clone SSM746. 46 3.5 1
(C92433) Dictyostelium discoideum slug cDNA, clone SSE540. 46 3.5 1
(C92348) Dictyostelium discoideum slug cDNA, clone SSD391. 46 3.5 1
(C91972) Dictyostelium discoideum slug cDNA, clone SSC631. 46 3.5 1
(C91473) Dictyostelium discoideum slug cDNA, clone SSK322. 46 3.5 1
(C91454) Dictyostelium discoideum slug cDNA, clone SSK301. 46 3.5 1
(C91322) Dictyostelium discoideum slug cDNA, clone SSK474. 46 3.5 1
(C90717) Dictyostelium discoideum slug cDNA, clone SSJ865. 46 3.5 1
(C90118) Dictyostelium discoideum slug cDNA, clone SSI112. 46 3.5 1
(C89653) Dictyostelium discoideum slug cDNA, clone SSA505. 46 3.5 1
(C25640) Dictyostelium discoideum slug cDNA, clone SSA837. 46 3.5 1

>(AY077632) Dictyostelium discoideum ABC transporter ABCD.1 and ABC
transporter ABCD.3 genes, partial cds.
Length = 3350

Score = 714 bits (360), Expect(2) = 0.0
Identities = 360/360 (100%)
Strand = Plus / Plus


Query: 933 gaattccaaaatcaataatgagagaattattccaaagatttgaaattgattatttattag 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1404 gaattccaaaatcaataatgagagaattattccaaagatttgaaattgattatttattag 1463


Query: 993 atcgtgaaagattcattaaaaagagtgctcaagttaatgatctcactcataattggttaa 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1464 atcgtgaaagattcattaaaaagagtgctcaagttaatgatctcactcataattggttaa 1523


Query: 1053 atcaattatcaccaggtgaacaacaattaattgcaattattagattaatctatcataaac 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1524 atcaattatcaccaggtgaacaacaattaattgcaattattagattaatctatcataaac 1583


Query: 1113 ctaaattcgctttaatggatgaatctacaagttcaattcctcaatcacttgaagaacgtg 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1584 ctaaattcgctttaatggatgaatctacaagttcaattcctcaatcacttgaagaacgtg 1643


Query: 1173 tttactatgttgcaaaagaattaggaataacaatcattagtgttggtcatcgtatttcac 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1644 tttactatgttgcaaaagaattaggaataacaatcattagtgttggtcatcgtatttcac 1703


Query: 1233 ttttaaaatatcattcaactttattaagatttgataaagataaaaattggtaccttgaag 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1704 ttttaaaatatcattcaactttattaagatttgataaagataaaaattggtaccttgaag 1763

Score = 420 bits (212), Expect(2) = 0.0
Identities = 212/212 (100%)
Strand = Plus / Plus


Query: 708 aaatttcaattaatgttaaaagaggaaataatttattaataatgggaccaagtggttcag 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1179 aaatttcaattaatgttaaaagaggaaataatttattaataatgggaccaagtggttcag 1238


Query: 768 gtaaatcatcattaattagaattattaatggattatggccattttttaaaggtagtattg 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1239 gtaaatcatcattaattagaattattaatggattatggccattttttaaaggtagtattg 1298


Query: 828 atagaccagagaatggtgatatgtttttcttaccacaacaaccatatttaatatttggta 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1299 atagaccagagaatggtgatatgtttttcttaccacaacaaccatatttaatatttggta 1358


Query: 888 ctttagaagaacaaattctatatccatttagt 919
||||||||||||||||||||||||||||||||
Sbjct: 1359 ctttagaagaacaaattctatatccatttagt 1390

Score = 426 bits (215), Expect(2) = e-145
Identities = 236/243 (97%)
Strand = Plus / Plus


Query: 421 gttttgcaattggtggtagtgcattgttggctgcaatcattaatttcatcgttagtataa 480
||||||||||||||||||||||||| || | |||||||||||| ||||||||||||||||
Sbjct: 2485 gttttgcaattggtggtagtgcattatttgatgcaatcattaaattcatcgttagtataa 2544


Query: 481 tggcatggaattggaggaaaactttatgtttatacattcaaaatgtttatttcaaaaaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2545 tggcatggaattggaggaaaactttatgtttatacattcaaaatgtttatttcaaaaaat 2604


Query: 541 cattattctacaagatattagcatttgatgatagaattgataatccagatcaacgtataa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2605 cattattctacaagatattagcatttgatgatagaattgataatccagatcaacgtataa 2664


Query: 601 catctgatattgataatttcacaacactattagcgtcaattgtatctcaatgtatcactg 660
||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||
Sbjct: 2665 catctgatattgataattttacaacactattatcatcaattgtatctcaatgtatcactg 2724


Query: 661 gtc 663
|||
Sbjct: 2725 gtc 2727

Score = 123 bits (62), Expect(2) = e-145
Identities = 110/126 (87%)
Strand = Plus / Plus


Query: 264 aaacctgtgattccattaactttatttttaatattatttggtaatggatttgcacaaact 323
||||| |||||||||||| ||||||||| |||||||||||| |||| || ||||||||
Sbjct: 2328 aaaccagtgattccattattattatttttattattatttggtagtggagtttcacaaact 2387


Query: 324 tatgtttcaaagttcacaggtattttattagcagatatttatgcatcatttacaagtggt 383
||| ||||||| |||||||||||||||||| || | ||||||| |||||| ||||||||
Sbjct: 2388 tatatttcaaaattcacaggtattttattatcaaacatttatggatcattaacaagtgga 2447


Query: 384 gataaa 389
||||||
Sbjct: 2448 gataaa 2453

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,299,628,282
Number of extensions: 82640717
Number of successful extensions: 6999852
Number of sequences better than 10.0: 147
Length of query: 1371
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1347
Effective length of database: 97,308,875,965
Effective search space: 131075055924855
Effective search space used: 131075055924855
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7. 3
Homology vs Protein
Query= Contig-U12436-1 (Contig-U12436-1Q) /CSM_Contig/Contig-U12436-1Q.Seq.d
(1371 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54W19) RecName: Full=ABC transporter D family member 1; AltNam... 404 e-111
AY077632_1(AY077632|pid:none) Dictyostelium discoideum ABC trans... 404 e-111
CR382130_167(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 169 2e-40
BC044468_1(BC044468|pid:none) Danio rerio ATP-binding cassette, ... 162 3e-38
BC153236_1(BC153236|pid:none) Bos taurus ATP-binding cassette, s... 162 3e-38
BC070657_1(BC070657|pid:none) Xenopus laevis hypothetical protei... 162 3e-38
CP000496_684(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 161 6e-38
S58009(I48716;S58009) PMP68 protein - mouse (fragment) &X89569_... 161 6e-38
AK004660_1(AK004660|pid:none) Mus musculus adult male lung cDNA,... 161 6e-38
AK153298_1(AK153298|pid:none) Mus musculus bone marrow macrophag... 161 6e-38
BC009119_1(BC009119|pid:none) Mus musculus ATP-binding cassette,... 160 8e-38
AK144060_1(AK144060|pid:none) Mus musculus adult male kidney cDN... 160 1e-37
(P16970) RecName: Full=ATP-binding cassette sub-family D member ... 159 2e-37
AF532975_2(AF532975|pid:none) Oryza sativa (indica cultivar-grou... 158 4e-37
AP008211_53(AP008211|pid:none) Oryza sativa (japonica cultivar-g... 158 4e-37
(P55096) RecName: Full=ATP-binding cassette sub-family D member ... 158 5e-37
AF378120_2(AF378120|pid:none) Arabidopsis thaliana peroxisomal A... 157 7e-37
AE014135_39(AE014135|pid:none) Drosophila melanogaster chromosom... 157 7e-37
AE014135_33(AE014135|pid:none) Drosophila melanogaster chromosom... 157 7e-37
AB070615_1(AB070615|pid:none) Arabidopsis thaliana PED3 gene for... 157 7e-37
(P28288) RecName: Full=ATP-binding cassette sub-family D member ... 157 9e-37
AB173749_1(AB173749|pid:none) Macaca fascicularis brain cDNA clo... 157 1e-36
CR382134_376(CR382134|pid:none) Debaryomyces hansenii strain CBS... 156 1e-36
AP004365_17(AP004365|pid:none) Oryza sativa Japonica Group genom... 156 2e-36
AK302714_1(AK302714|pid:none) Homo sapiens cDNA FLJ54042 complet... 155 2e-36
AE014298_3062(AE014298|pid:none) Drosophila melanogaster chromos... 155 3e-36
CP000393_275(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 154 9e-36
S20313(S20313) peroxisomal membrane protein, 70K - human &X5852... 153 1e-35
AJ851381_1(AJ851381|pid:none) Gallus gallus mRNA for hypothetica... 153 1e-35
(Q9UBJ2) RecName: Full=ATP-binding cassette sub-family D member ... 152 3e-35
(Q55774) RecName: Full=Uncharacterized ABC transporter ATP-bindi... 152 3e-35
T15802(T15802) hypothetical protein C44B7.9 - Caenorhabditis ele... 152 4e-35
(P48410) RecName: Full=ATP-binding cassette sub-family D member ... 152 4e-35
BC105508_1(BC105508|pid:none) Bos taurus ATP-binding cassette, s... 151 6e-35
A52455_1(A52455|pid:none) Sequence 2 from Patent WO9621733. &Z2... 151 6e-35
DQ891000_1(DQ891000|pid:none) Synthetic construct clone IMAGE:10... 151 6e-35
AK082588_1(AK082588|pid:none) Mus musculus 0 day neonate cerebel... 150 8e-35
AK051445_1(AK051445|pid:none) Mus musculus 12 days embryo spinal... 150 8e-35
T15801(T15801) hypothetical protein C44B7.8 - Caenorhabditis ele... 150 1e-34
T24357(T24357) hypothetical protein T02D1.5 - Caenorhabditis ele... 149 2e-34
AK161027_1(AK161027|pid:none) Mus musculus 14 days embryo liver ... 149 2e-34
AE017343_388(AE017343|pid:none) Cryptococcus neoformans var. neo... 148 4e-34
AJ536156_3(AJ536156|pid:none) Anabaena sp. 90 microcystin synthe... 148 5e-34
CP001291_5087(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 146 2e-33
EU438895_2(EU438895|pid:none) Planktothrix agardhii NIVA-CYA 126... 145 3e-33
CP000878_74(CP000878|pid:none) Prochlorococcus marinus str. MIT ... 145 3e-33
AC129716_7(AC129716|pid:none) Oryza sativa (japonica cultivar-gr... 145 3e-33
AE017126_79(AE017126|pid:none) Prochlorococcus marinus subsp. ma... 145 3e-33
AM943877_5(AM943877|pid:none) Microcystis aeruginosa NIES-298 mi... 144 6e-33
CP000554_312(CP000554|pid:none) Prochlorococcus marinus str. MIT... 144 7e-33
AB481215_1(AB481215|pid:none) Microcystis aeruginosa K-139 mipH,... 144 7e-33
DQ075244_2(DQ075244|pid:none) Microcystis sp. NIVA-CYA 172/5 cya... 144 7e-33
CP000095_110(CP000095|pid:none) Prochlorococcus marinus str. NAT... 144 7e-33
(Q8T8P3) RecName: Full=ABC transporter D family member 2; AltNam... 144 1e-32
AM778942_61(AM778942|pid:none) Microcystis aeruginosa PCC 7806 g... 144 1e-32
CR382127_205(CR382127|pid:none) Yarrowia lipolytica strain CLIB1... 143 1e-32
CP000553_130(CP000553|pid:none) Prochlorococcus marinus str. NAT... 143 2e-32
CP001287_1286(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 142 2e-32
AP009552_2406(AP009552|pid:none) Microcystis aeruginosa NIES-843... 142 3e-32
AM778945_44(AM778945|pid:none) Microcystis aeruginosa PCC 7806 g... 142 3e-32
AP008207_3767(AP008207|pid:none) Oryza sativa (japonica cultivar... 142 4e-32
AH2138(AH2138) ABC transporter ATP-binding protein alr2663 [impo... 141 5e-32
AK134763_1(AK134763|pid:none) Mus musculus adult male medulla ob... 141 6e-32
AY167420_5(AY167420|pid:none) Nostoc sp. ATCC 53789 nostocyclope... 141 6e-32
DQ065772_1(DQ065772|pid:none) Trypanosoma brucei brucei glycosom... 141 6e-32
CP000828_5796(CP000828|pid:none) Acaryochloris marina MBIC11017,... 140 8e-32
AP008231_902(AP008231|pid:none) Synechococcus elongatus PCC 6301... 140 8e-32
GN078346_1(GN078346|pid:none) Sequence 67 from Patent WO20090273... 140 1e-31
CP001291_5170(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 140 1e-31
CP000576_77(CP000576|pid:none) Prochlorococcus marinus str. MIT ... 140 1e-31
BX548174_69(BX548174|pid:none) Prochlorococcus marinus MED4 comp... 139 2e-31
CP000551_78(CP000551|pid:none) Prochlorococcus marinus str. AS96... 139 2e-31
CP001037_1991(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 138 4e-31
BA000039_223(BA000039|pid:none) Thermosynechococcus elongatus BP... 138 5e-31
CP001291_4770(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 138 5e-31
CP000825_78(CP000825|pid:none) Prochlorococcus marinus str. MIT ... 138 5e-31
CP000497_453(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 137 7e-31
CP000111_70(CP000111|pid:none) Prochlorococcus marinus str. MIT ... 137 7e-31
AY210783_14(AY210783|pid:none) Nodularia spumigena strain NSOR10... 137 9e-31
CP000110_2221(CP000110|pid:none) Synechococcus sp. CC9605, compl... 137 9e-31
BT020935_1(BT020935|pid:none) Bos taurus ATP-binding cassette, s... 136 2e-30
CP000239_911(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, comp... 136 2e-30
AF183408_4(AF183408|pid:none) Microcystis aeruginosa PCC 7806 DN... 136 2e-30
AB032549_5(AB032549|pid:none) Microcystis aeruginosa mcyD, mcyE,... 135 3e-30
CP001344_1354(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 135 3e-30
AM269959_12(AM269959|pid:none) Aspergillus niger contig An01c012... 135 3e-30
EF407558_1(EF407558|pid:none) Chelon labrosus 70 kDa peroxisomal... 135 5e-30
AM920431_939(AM920431|pid:none) Penicillium chrysogenum Wisconsi... 134 8e-30
EF672686_5(EF672686|pid:none) Planktothrix agardhii NIVA-CYA 126... 134 8e-30
X83467_1(X83467|pid:none) H.sapiens PXMP1 gene, exon 1 (and join... 134 1e-29
(O89016) RecName: Full=ATP-binding cassette sub-family D member ... 133 1e-29
CP000240_179(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-13... 133 2e-29
CP001132_696(CP001132|pid:none) Acidithiobacillus ferrooxidans A... 132 2e-29
AY890309_1(AY890309|pid:none) Synthetic construct Homo sapiens c... 132 2e-29
(O14678) RecName: Full=ATP-binding cassette sub-family D member ... 132 2e-29
CR457104_1(CR457104|pid:none) Homo sapiens full open reading fra... 132 2e-29
AK291332_1(AK291332|pid:none) Homo sapiens cDNA FLJ77136 complet... 132 2e-29
CP000267_3763(CP000267|pid:none) Rhodoferax ferrireducens T118, ... 131 5e-29
AM260479_2115(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 131 5e-29
CP001577_491(CP001577|pid:none) Micromonas sp. RCC299 chromosome... 131 7e-29
CR382126_501(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 130 1e-28
CP000090_1629(CP000090|pid:none) Ralstonia eutropha JMP134 chrom... 130 1e-28
AM494970_213(AM494970|pid:none) Leishmania braziliensis chromoso... 129 2e-28
BT012226_1(BT012226|pid:none) Arabidopsis thaliana At1g54350 gen... 128 4e-28
CR382122_104(CR382122|pid:none) Kluyveromyces lactis strain NRRL... 128 6e-28
CU928174_556(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 128 6e-28
CU928168_641(CU928168|pid:none) Kluyveromyces thermotolerans str... 127 1e-27
(P34230) RecName: Full=Peroxisomal long-chain fatty acid import ... 126 2e-27
AC155884_14(AC155884|pid:none) Medicago truncatula chromosome 2 ... 126 2e-27
CP001600_1557(CP001600|pid:none) Edwardsiella ictaluri 93-146, c... 125 3e-27
AM421808_977(AM421808|pid:none) Neisseria meningitidis serogroup... 125 5e-27
CR954202_530(CR954202|pid:none) Ostreococcus tauri strain OTTH05... 124 8e-27
CP001016_1711(CP001016|pid:none) Beijerinckia indica subsp. indi... 124 8e-27
CU928178_292(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 124 8e-27
CP000697_1201(CP000697|pid:none) Acidiphilium cryptum JF-5, comp... 122 3e-26
CP000926_1851(CP000926|pid:none) Pseudomonas putida GB-1, comple... 122 4e-26
AE015451_2219(AE015451|pid:none) Pseudomonas putida KT2440 compl... 122 4e-26
CP000436_1475(CP000436|pid:none) Haemophilus somnus 129PT, compl... 121 5e-26
CP001013_2957(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 121 7e-26
AL035708_2(AL035708|pid:none) Arabidopsis thaliana DNA chromosom... 120 9e-26
CP000656_3390(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 120 1e-25
CP000949_1708(CP000949|pid:none) Pseudomonas putida W619, comple... 120 1e-25
CP001329_130(CP001329|pid:none) Micromonas sp. RCC299 chromosome... 120 2e-25
CT005270_222(CT005270|pid:none) Leishmania major strain Friedlin... 120 2e-25
T20228(T20228) hypothetical protein C54G10.3 - Caenorhabditis el... 120 2e-25
AM502251_187(AM502251|pid:none) Leishmania infantum chromosome 33. 120 2e-25
CP000884_4003(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 119 2e-25
(P41909) RecName: Full=Peroxisomal long-chain fatty acid import ... 119 3e-25
Z73502_1(Z73502|pid:none) S.cerevisiae chromosome XVI reading fr... 119 3e-25
FM992695_38(FM992695|pid:none) Candida dubliniensis CD36 chromos... 119 3e-25
AC114397_11(AC114397|pid:none) Trypanosoma cruzi strain CL Brene... 118 4e-25
AP006618_780(AP006618|pid:none) Nocardia farcinica IFM 10152 DNA... 117 7e-25
CP000058_4060(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 117 1e-24
CU458896_3372(CU458896|pid:none) Mycobacterium abscessus chromos... 117 1e-24
CP000908_4424(CP000908|pid:none) Methylobacterium extorquens PA1... 117 1e-24
CP001510_4567(CP001510|pid:none) Methylobacterium extorquens AM1... 117 1e-24
CP001298_4743(CP001298|pid:none) Methylobacterium chloromethanic... 117 1e-24
AP002745_8(AP002745|pid:none) Oryza sativa Japonica Group genomi... 117 1e-24
AE004439_1072(AE004439|pid:none) Pasteurella multocida subsp. mu... 117 1e-24
CT573326_1675(CT573326|pid:none) Pseudomonas entomophila str. L4... 116 2e-24
CP000151_326(CP000151|pid:none) Burkholderia sp. 383 chromosome ... 115 4e-24
CP000270_4013(CP000270|pid:none) Burkholderia xenovorans LB400 c... 115 4e-24
AE016816_332(AE016816|pid:none) Ashbya gossypii (= Eremothecium ... 115 5e-24
CP001068_322(CP001068|pid:none) Ralstonia pickettii 12J chromoso... 114 6e-24
CP000440_324(CP000440|pid:none) Burkholderia ambifaria AMMD chro... 114 6e-24
CP000570_3633(CP000570|pid:none) Burkholderia pseudomallei 668 c... 114 8e-24
CP000614_372(CP000614|pid:none) Burkholderia vietnamiensis G4 ch... 114 8e-24
CP001196_3229(CP001196|pid:none) Oligotropha carboxidovorans OM5... 114 8e-24
BX571965_3182(BX571965|pid:none) Burkholderia pseudomallei strai... 114 1e-23
CP000546_1741(CP000546|pid:none) Burkholderia mallei NCTC 10229 ... 114 1e-23
CP001052_3513(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 114 1e-23
CU633749_381(CU633749|pid:none) Cupriavidus taiwanensis str. LMG... 113 2e-23
AB237163_21(AB237163|pid:none) Pseudomonas syringae pv. actinidi... 112 3e-23
CP000958_387(CP000958|pid:none) Burkholderia cenocepacia MC0-3 c... 112 3e-23
AM747720_301(AM747720|pid:none) Burkholderia cenocepacia J2315 c... 112 3e-23
CR380959_102(CR380959|pid:none) Candida glabrata strain CBS138 c... 112 4e-23
CP001503_305(CP001503|pid:none) Burkholderia glumae BGR1 chromos... 112 4e-23
CP001025_334(CP001025|pid:none) Burkholderia ambifaria MC40-6 ch... 112 4e-23
CU914168_491(CU914168|pid:none) Ralstonia solanacearum strain IP... 111 5e-23
AM260479_441(AM260479|pid:none) Ralstonia eutropha H16 chromosom... 111 7e-23
CP000854_2668(CP000854|pid:none) Mycobacterium marinum M, comple... 110 9e-23
CP000463_4647(CP000463|pid:none) Rhodopseudomonas palustris BisA... 110 9e-23
AM167904_1489(AM167904|pid:none) Bordetella avium 197N complete ... 110 9e-23
(Q50614) RecName: Full=Uncharacterized ABC transporter ATP-bindi... 110 1e-22
AL646052_456(AL646052|pid:none) Ralstonia solanacearum GMI1000 c... 110 2e-22
AM902716_4505(AM902716|pid:none) Bordetella petrii strain DSM 12... 110 2e-22
BX248340_122(BX248340|pid:none) Mycobacterium bovis subsp. bovis... 110 2e-22
BT055019_1(BT055019|pid:none) Zea mays full-length cDNA clone ZM... 109 2e-22
CP000494_1572(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 109 3e-22
CP000781_2444(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 108 5e-22
CP001280_784(CP001280|pid:none) Methylocella silvestris BL2, com... 108 5e-22
CP000090_429(CP000090|pid:none) Ralstonia eutropha JMP134 chromo... 108 6e-22
AE016827_1316(AE016827|pid:none) Mannheimia succiniciproducens M... 108 6e-22
CU234118_5798(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 107 8e-22
CP001050_970(CP001050|pid:none) Neisseria gonorrhoeae NCCP11945,... 107 8e-22
CP000671_549(CP000671|pid:none) Haemophilus influenzae PittEE, c... 107 1e-21
CP001349_647(CP001349|pid:none) Methylobacterium nodulans ORS 20... 107 1e-21
BC155605_1(BC155605|pid:none) Danio rerio zgc:172102, mRNA (cDNA... 107 1e-21
CP000943_1747(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 107 1e-21
CP001616_672(CP001616|pid:none) Tolumonas auensis DSM 9187, comp... 107 1e-21
CP000267_723(CP000267|pid:none) Rhodoferax ferrireducens T118, c... 107 1e-21
AF067949_7(AF067949|pid:none) Caenorhabditis elegans cosmid T10H... 107 1e-21
CU458896_1052(CU458896|pid:none) Mycobacterium abscessus chromos... 107 1e-21
(Q57335) RecName: Full=Uncharacterized ABC transporter ATP-bindi... 106 2e-21
CP000057_36(CP000057|pid:none) Haemophilus influenzae 86-028NP, ... 106 2e-21
CP000133_487(CP000133|pid:none) Rhizobium etli CFN 42, complete ... 106 2e-21
AE016958_1531(AE016958|pid:none) Mycobacterium avium subsp. para... 105 3e-21
CP000746_1155(CP000746|pid:none) Actinobacillus succinogenes 130... 105 4e-21
CP000094_821(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, c... 105 4e-21
CP001074_560(CP001074|pid:none) Rhizobium etli CIAT 652, complet... 105 4e-21
CP000672_435(CP000672|pid:none) Haemophilus influenzae PittGG, c... 105 5e-21
CU234118_227(CU234118|pid:none) Bradyrhizobium sp. ORS278,comple... 104 7e-21
AL008609_47(AL008609|pid:none) Mycobacterium leprae cosmid B1788... 103 1e-20
CP000511_3114(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 103 1e-20
CR954211_122(CR954211|pid:none) Ostreococcus tauri strain OTTH05... 103 2e-20
AC005287_17(AC005287|pid:none) Arabidopsis thaliana chromosome I... 102 2e-20
CP000580_2850(CP000580|pid:none) Mycobacterium sp. JLS, complete... 102 3e-20
BA000040_7537(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 102 3e-20
BA000040_517(BA000040|pid:none) Bradyrhizobium japonicum USDA 11... 102 4e-20
CP000352_369(CP000352|pid:none) Ralstonia metallidurans CH34, co... 101 7e-20
CP000529_630(CP000529|pid:none) Polaromonas naphthalenivorans CJ... 101 7e-20
AM181176_3155(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 100 1e-19
CP000569_559(CP000569|pid:none) Actinobacillus pleuropneumoniae ... 100 2e-19
BT068397_1(BT068397|pid:none) Zea mays full-length cDNA clone ZM... 100 2e-19
CP000697_554(CP000697|pid:none) Acidiphilium cryptum JF-5, compl... 99 4e-19
AP009384_1475(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 99 5e-19
CP000511_3115(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 99 5e-19
CP001154_2440(CP001154|pid:none) Laribacter hongkongensis HLHK9,... 98 8e-19
CP000960_97(CP000960|pid:none) Burkholderia cenocepacia MC0-3 ch... 98 8e-19
BX950851_1262(BX950851|pid:none) Erwinia carotovora subsp. atros... 97 1e-18
CP000320_115(CP000320|pid:none) Nitrobacter hamburgensis X14 pla... 96 4e-18
AP010904_1294(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 95 7e-18
CP001504_966(CP001504|pid:none) Burkholderia glumae BGR1 chromos... 90 2e-16
CP000439_1654(CP000439|pid:none) Francisella tularensis subsp. n... 89 4e-16
AM236080_69(AM236080|pid:none) Rhizobium leguminosarum bv. vicia... 89 5e-16
AP007255_2231(AP007255|pid:none) Magnetospirillum magneticum AMB... 89 5e-16
EU142269_1(EU142269|pid:none) Artemia franciscana peroxisomal me... 88 8e-16
AM286415_306(AM286415|pid:none) Yersinia enterocolitica subsp. e... 87 1e-15
CU459003_2074(CU459003|pid:none) Magnetospirillum gryphiswaldens... 87 1e-15
CP001505_88(CP001505|pid:none) Burkholderia glumae BGR1 plasmid ... 87 2e-15
AF067949_8(AF067949|pid:none) Caenorhabditis elegans cosmid T10H... 87 2e-15
BC085037_1(BC085037|pid:none) Xenopus laevis hypothetical LOC495... 86 3e-15
AE017282_1578(AE017282|pid:none) Methylococcus capsulatus str. B... 85 7e-15
BC050102_1(BC050102|pid:none) Mus musculus ATP-binding cassette,... 84 9e-15
CP000937_894(CP000937|pid:none) Francisella philomiragia subsp. ... 83 2e-14
(P97998) RecName: Full=ATP-dependent permease MDL1; &Y12327_1(Y... 82 3e-14
CP000492_1689(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 82 6e-14
AM946015_1143(AM946015|pid:none) Streptococcus uberis 0140J comp... 82 6e-14
CP000601_13(CP000601|pid:none) Ostreococcus lucimarinus CCE9901 ... 81 8e-14
AE009948_668(AE009948|pid:none) Streptococcus agalactiae 2603V/R... 81 1e-13
CP000851_4188(CP000851|pid:none) Shewanella pealeana ATCC 700345... 79 3e-13
CP000806_3521(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 79 5e-13
CP001280_396(CP001280|pid:none) Methylocella silvestris BL2, com... 79 5e-13
CP000968_1367(CP000968|pid:none) Candidatus Korarchaeum cryptofi... 78 7e-13
CP001102_1169(CP001102|pid:none) Candidatus Amoebophilus asiatic... 78 9e-13
A99446(A99446) ABC transporter, ATP binding protein SSO2713 [imp... 78 9e-13
AE017198_566(AE017198|pid:none) Lactobacillus johnsonii NCC 533,... 77 1e-12
CP000487_925(CP000487|pid:none) Campylobacter fetus subsp. fetus... 77 1e-12
AM233362_1427(AM233362|pid:none) Francisella tularensis subsp. h... 77 1e-12
AY967212_1(AY967212|pid:none) Synthetic construct isolate FTT079... 77 1e-12
AE014075_1864(AE014075|pid:none) Escherichia coli CFT073, comple... 77 1e-12
DQ498907_1(DQ498907|pid:none) Staphylococcus xylosus ABC-type tr... 77 1e-12
FM180568_1623(FM180568|pid:none) Escherichia coli 0127:H6 E2348/... 77 1e-12
CP000510_2656(CP000510|pid:none) Psychromonas ingrahamii 37, com... 77 2e-12
A85590(A85590) hypothetical protein glnQ [imported] - Escherichi... 77 2e-12
CP000034_731(CP000034|pid:none) Shigella dysenteriae Sd197, comp... 77 2e-12
AY421738_1(AY421738|pid:none) Homo sapiens isolate ALD-M030802 m... 76 2e-12
(P10346) RecName: Full=Glutamine transport ATP-binding protein g... 76 3e-12
AE014075_867(AE014075|pid:none) Escherichia coli CFT073, complet... 76 3e-12
CU928158_899(CU928158|pid:none) Escherichia fergusonii ATCC 3546... 76 3e-12
AY421737_1(AY421737|pid:none) Homo sapiens isolate ALD-M021101 m... 76 3e-12
AE016830_2710(AE016830|pid:none) Enterococcus faecalis V583, com... 75 4e-12
CP000075_1601(CP000075|pid:none) Pseudomonas syringae pv. syring... 75 4e-12
FM954972_1468(FM954972|pid:none) Vibrio splendidus LGP32 chromos... 75 4e-12
CP000802_1505(CP000802|pid:none) Escherichia coli HS, complete g... 75 4e-12
CP001337_2419(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 75 6e-12
X71917_1(X71917|pid:none) E.coli cds102, cds 103, cds106, cds107... 75 6e-12
(P31826) RecName: Full=Inner membrane ABC transporter ATP-bindin... 75 6e-12
AE005174_1972(AE005174|pid:none) Escherichia coli O157:H7 EDL933... 75 6e-12
CP000094_1681(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 75 6e-12
CP000141_368(CP000141|pid:none) Carboxydothermus hydrogenoforman... 75 6e-12
BA000007_2101(BA000007|pid:none) Escherichia coli O157:H7 str. S... 75 6e-12
CP000038_1525(CP000038|pid:none) Shigella sonnei Ss046, complete... 75 6e-12
CP000946_2112(CP000946|pid:none) Escherichia coli ATCC 8739, com... 75 6e-12
AE005674_760(AE005674|pid:none) Shigella flexneri 2a str. 301, c... 75 7e-12
CP000970_1614(CP000970|pid:none) Escherichia coli SMS-3-5, compl... 75 7e-12
CP001400_2420(CP001400|pid:none) Sulfolobus islandicus M.14.25, ... 75 7e-12
A71243(A71243) probable maltose/maltodextrin transport ATP-bindi... 75 7e-12
CP001108_1055(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 75 7e-12
AM180355_3617(AM180355|pid:none) Clostridium difficile 630 compl... 75 7e-12
CP001393_838(CP001393|pid:none) Anaerocellum thermophilum DSM 67... 75 7e-12
CP000880_2022(CP000880|pid:none) Salmonella enterica subsp. ariz... 74 9e-12
CP000886_2608(CP000886|pid:none) Salmonella enterica subsp. ente... 74 9e-12
EU901022_1(EU901022|pid:none) Escherichia coli strain 87-14 puta... 74 9e-12
CP001063_1511(CP001063|pid:none) Shigella boydii CDC 3083-94, co... 74 9e-12
AE005672_667(AE005672|pid:none) Streptococcus pneumoniae TIGR4, ... 74 1e-11
CU928160_1467(CU928160|pid:none) Escherichia coli IAI1 chromosom... 74 1e-11
AM412317_1502(AM412317|pid:none) Clostridium botulinum A str. AT... 74 1e-11
AE007317_622(AE007317|pid:none) Streptococcus pneumoniae R6, com... 74 1e-11
CP000653_1287(CP000653|pid:none) Enterobacter sp. 638, complete ... 74 1e-11
CP000505_1153(CP000505|pid:none) Thermofilum pendens Hrk 5, comp... 74 1e-11
AE017285_1230(AE017285|pid:none) Desulfovibrio vulgaris subsp. v... 74 1e-11
CP000482_2105(CP000482|pid:none) Pelobacter propionicus DSM 2379... 74 1e-11
CP000728_1490(CP000728|pid:none) Clostridium botulinum F str. La... 74 1e-11
CP000939_1523(CP000939|pid:none) Clostridium botulinum B1 str. O... 74 1e-11
AM942759_2713(AM942759|pid:none) Proteus mirabilis strain HI4320... 74 2e-11
FP236842_2340(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/9... 74 2e-11
AE003853_1017(AE003853|pid:none) Vibrio cholerae O1 biovar eltor... 74 2e-11
AP009240_1586(AP009240|pid:none) Escherichia coli SE11 DNA, comp... 74 2e-11
CP001600_2504(CP001600|pid:none) Edwardsiella ictaluri 93-146, c... 74 2e-11
AE016853_3795(AE016853|pid:none) Pseudomonas syringae pv. tomato... 73 2e-11
AE009948_753(AE009948|pid:none) Streptococcus agalactiae 2603V/R... 73 2e-11
A75208(A75208) sugar transport ATP-binding protein. PAB2232 - Py... 73 2e-11
CP000721_3612(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 73 2e-11
CP001399_2544(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 73 2e-11
CP001403_2699(CP001403|pid:none) Sulfolobus islandicus Y.G.57.14... 73 2e-11
CP000152_831(CP000152|pid:none) Burkholderia sp. 383 chromosome ... 73 3e-11
CP001026_1651(CP001026|pid:none) Burkholderia ambifaria MC40-6 c... 73 3e-11
CP001089_1811(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 73 3e-11
BX950851_868(BX950851|pid:none) Erwinia carotovora subsp. atrose... 73 3e-11
CP000817_624(CP000817|pid:none) Lysinibacillus sphaericus C3-41,... 73 3e-11
AF167344_1(AF167344|pid:none) Campylobacter jejuni HS:19 lipooli... 73 3e-11
BA000012_2731(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 72 4e-11
CP001101_395(CP001101|pid:none) Chlorobium phaeobacteroides BS1,... 72 4e-11
AP006878_720(AP006878|pid:none) Thermococcus kodakarensis KOD1 D... 72 4e-11
AP009552_4593(AP009552|pid:none) Microcystis aeruginosa NIES-843... 72 4e-11
CP000814_1068(CP000814|pid:none) Campylobacter jejuni subsp. jej... 72 4e-11
GM015893_119(GM015893|pid:none) Sequence 723 from Patent EP19234... 72 4e-11
CP000759_176(CP000759|pid:none) Ochrobactrum anthropi ATCC 49188... 72 4e-11
EF633733_1(EF633733|pid:none) Lactobacillus helveticus CNRZ32 AB... 72 4e-11
CP001056_679(CP001056|pid:none) Clostridium botulinum B str. Ekl... 72 4e-11
BA000037_1685(BA000037|pid:none) Vibrio vulnificus YJ016 DNA, ch... 72 4e-11
AE016796_760(AE016796|pid:none) Vibrio vulnificus CMCP6 chromoso... 72 5e-11
(O85818) RecName: Full=Spermidine/putrescine import ATP-binding ... 72 5e-11
CP000514_3013(CP000514|pid:none) Marinobacter aquaeolei VT8, com... 72 5e-11
CP000673_2017(CP000673|pid:none) Clostridium kluyveri DSM 555, c... 72 5e-11
CP000025_1231(CP000025|pid:none) Campylobacter jejuni RM1221, co... 72 5e-11
AB368180_2(AB368180|pid:none) Desulfotignum balticum ORF1 to ORF... 72 5e-11
AM180355_3620(AM180355|pid:none) Clostridium difficile 630 compl... 72 5e-11
BA000022_1648(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,... 72 5e-11
BA000038_1279(BA000038|pid:none) Vibrio vulnificus YJ016 DNA, ch... 72 5e-11
AE009950_1744(AE009950|pid:none) Pyrococcus furiosus DSM 3638, c... 72 5e-11
CP000739_805(CP000739|pid:none) Sinorhizobium medicae WSM419 pla... 72 5e-11
BA000001_1391(BA000001|pid:none) Pyrococcus horikoshii OT3 DNA, ... 72 5e-11
CP000709_223(CP000709|pid:none) Brucella ovis ATCC 25840 chromos... 72 5e-11
AP008937_822(AP008937|pid:none) Lactobacillus fermentum IFO 3956... 72 6e-11
CT573326_1308(CT573326|pid:none) Pseudomonas entomophila str. L4... 72 6e-11
(P40790) RecName: Full=Spermidine/putrescine import ATP-binding ... 72 6e-11
CP000469_4051(CP000469|pid:none) Shewanella sp. ANA-3, complete ... 72 6e-11
CP000728_1071(CP000728|pid:none) Clostridium botulinum F str. La... 72 6e-11
(Q5ZWE4) RecName: Full=Spermidine/putrescine import ATP-binding ... 72 6e-11
AM180355_1517(AM180355|pid:none) Clostridium difficile 630 compl... 72 6e-11
(Q6LR20) RecName: Full=Spermidine/putrescine import ATP-binding ... 72 6e-11
CP000675_1269(CP000675|pid:none) Legionella pneumophila str. Cor... 72 6e-11
CP000743_1318(CP000743|pid:none) Methanococcus aeolicus Nankai-3... 72 6e-11
CP000382_132(CP000382|pid:none) Clostridium novyi NT, complete g... 72 6e-11
CP000446_3857(CP000446|pid:none) Shewanella sp. MR-4, complete g... 72 6e-11
AE017354_1119(AE017354|pid:none) Legionella pneumophila subsp. p... 72 6e-11
CP001139_978(CP001139|pid:none) Vibrio fischeri MJ11 chromosome ... 72 6e-11
FM178379_1580(FM178379|pid:none) Aliivibrio salmonicida LFI1238 ... 71 8e-11
(P33310) RecName: Full=ATP-dependent permease MDL1, mitochondria... 71 8e-11
CP000076_4332(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 71 8e-11
AP008934_1200(AP008934|pid:none) Staphylococcus saprophyticus su... 71 8e-11
AE007317_1215(AE007317|pid:none) Streptococcus pneumoniae R6, co... 71 8e-11
AP009384_1839(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 71 8e-11
AP007255_60(AP007255|pid:none) Magnetospirillum magneticum AMB-1... 71 8e-11
AM236085_60(AM236085|pid:none) Rhizobium leguminosarum bv. vicia... 71 8e-11
CP001229_300(CP001229|pid:none) Sulfurihydrogenibium azorense Az... 71 8e-11
(Q9KS33) RecName: Full=Spermidine/putrescine import ATP-binding ... 71 8e-11
CP000774_2971(CP000774|pid:none) Parvibaculum lavamentivorans DS... 71 8e-11
CR378679_20(CR378679|pid:none) Photobacterium profundum SS9 chro... 71 8e-11
L16958_1(L16958|pid:none) Saccharomyces cerevisiae Mdl1p (MDL1) ... 71 8e-11
AE014133_475(AE014133|pid:none) Streptococcus mutans UA159, comp... 71 8e-11
CP001114_839(CP001114|pid:none) Deinococcus deserti VCD115, comp... 71 8e-11
CP000230_3290(CP000230|pid:none) Rhodospirillum rubrum ATCC 1117... 71 8e-11
AE005672_1280(AE005672|pid:none) Streptococcus pneumoniae TIGR4,... 71 8e-11
AE015927_464(AE015927|pid:none) Clostridium tetani E88, complete... 71 8e-11
CP000943_5250(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 71 1e-10
(Q1RK34) RecName: Full=Lipoprotein-releasing system ATP-binding ... 71 1e-10
BA000002_1078(BA000002|pid:none) Aeropyrum pernix K1 DNA, comple... 71 1e-10
CP001139_1338(CP001139|pid:none) Vibrio fischeri MJ11 chromosome... 71 1e-10
CP000962_1600(CP000962|pid:none) Clostridium botulinum A3 str. L... 71 1e-10
CP000553_1475(CP000553|pid:none) Prochlorococcus marinus str. NA... 71 1e-10
CU928158_1227(CU928158|pid:none) Escherichia fergusonii ATCC 354... 71 1e-10
G72543(G72543)probable ABC transporter ATP-binding protein APE16... 71 1e-10
CP001398_1087(CP001398|pid:none) Thermococcus gammatolerans EJ3,... 71 1e-10
CP000360_372(CP000360|pid:none) Acidobacteria bacterium Ellin345... 71 1e-10
CP000058_1526(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 71 1e-10
BA000001_25(BA000001|pid:none) Pyrococcus horikoshii OT3 DNA, co... 71 1e-10
CP000033_981(CP000033|pid:none) Lactobacillus acidophilus NCFM, ... 71 1e-10
CP000725_950(CP000725|pid:none) Streptococcus gordonii str. Chal... 70 1e-10
AB054186_5(AB054186|pid:none) Thermococcus litoralis mdxE, mdxF,... 70 1e-10
CP000918_1316(CP000918|pid:none) Streptococcus pneumoniae 70585,... 70 1e-10
CP000822_1875(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 70 1e-10
CU466930_973(CU466930|pid:none) Candidatus Cloacamonas acidamino... 70 1e-10
(Q74K65) RecName: Full=Spermidine/putrescine import ATP-binding ... 70 1e-10
(Q5E586) RecName: Full=Spermidine/putrescine import ATP-binding ... 70 1e-10
BA000040_3571(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 70 1e-10
CP000920_1258(CP000920|pid:none) Streptococcus pneumoniae P1031,... 70 1e-10
CP000090_2563(CP000090|pid:none) Ralstonia eutropha JMP134 chrom... 70 1e-10
CP000423_2443(CP000423|pid:none) Lactobacillus casei ATCC 334, c... 70 1e-10
CP000517_950(CP000517|pid:none) Lactobacillus helveticus DPC 457... 70 1e-10
CP000031_2974(CP000031|pid:none) Ruegeria pomeroyi DSS-3, comple... 70 1e-10
CP000607_609(CP000607|pid:none) Chlorobium phaeovibrioides DSM 2... 70 1e-10
AE008918_977(AE008918|pid:none) Brucella melitensis 16M chromoso... 70 1e-10
AE017224_842(AE017224|pid:none) Brucella abortus biovar 1 str. 9... 70 1e-10
CP001489_249(CP001489|pid:none) Brucella melitensis ATCC 23457 c... 70 1e-10
CP000964_3358(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 70 1e-10
CP001002_133(CP001002|pid:none) Methylobacterium radiotolerans J... 70 1e-10
CP001185_1372(CP001185|pid:none) Thermosipho africanus TCF52B, c... 70 1e-10
CP000575_110(CP000575|pid:none) Staphylothermus marinus F1, comp... 70 2e-10
AF121672_2(AF121672|pid:none) Staphylococcus aureus probable end... 70 2e-10
CP000058_2238(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 70 2e-10
CP000790_801(CP000790|pid:none) Vibrio harveyi ATCC BAA-1116 chr... 70 2e-10
AM181176_1989(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 70 2e-10
CP000270_2476(CP000270|pid:none) Burkholderia xenovorans LB400 c... 70 2e-10
AM260479_771(AM260479|pid:none) Ralstonia eutropha H16 chromosom... 70 2e-10
CP000263_274(CP000263|pid:none) Buchnera aphidicola str. Cc (Cin... 70 2e-10
(Q1QE80) RecName: Full=Spermidine/putrescine import ATP-binding ... 70 2e-10
CP001069_196(CP001069|pid:none) Ralstonia pickettii 12J chromoso... 70 2e-10
CP001091_282(CP001091|pid:none) Actinobacillus pleuropneumoniae ... 70 2e-10
CP000631_259(CP000631|pid:none) Agrobacterium radiobacter K84 pl... 70 2e-10
CP000569_280(CP000569|pid:none) Actinobacillus pleuropneumoniae ... 70 2e-10
CP000086_1215(CP000086|pid:none) Burkholderia thailandensis E264... 70 2e-10
CP000964_3228(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 70 2e-10
CP000480_4369(CP000480|pid:none) Mycobacterium smegmatis str. MC... 70 2e-10
CP000919_1195(CP000919|pid:none) Streptococcus pneumoniae JJA, c... 70 2e-10
CR382137_1111(CR382137|pid:none) Debaryomyces hansenii chromosom... 70 2e-10
CP000075_2889(CP000075|pid:none) Pseudomonas syringae pv. syring... 70 2e-10
CP001336_4514(CP001336|pid:none) Desulfitobacterium hafniense DC... 70 2e-10
CP000653_1628(CP000653|pid:none) Enterobacter sp. 638, complete ... 70 2e-10
FM177140_2673(FM177140|pid:none) Lactobacillus casei BL23 comple... 70 2e-10
AP006627_2152(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c... 70 2e-10
(Q042G7) RecName: Full=Spermidine/putrescine import ATP-binding ... 70 2e-10
AJ225561_6(AJ225561|pid:none) Rhizobium meliloti 10.6kB DNA frag... 70 2e-10
AE016830_2788(AE016830|pid:none) Enterococcus faecalis V583, com... 70 2e-10
CP000267_1288(CP000267|pid:none) Rhodoferax ferrireducens T118, ... 70 2e-10
CP000411_1343(CP000411|pid:none) Oenococcus oeni PSU-1, complete... 70 2e-10
BX908798_1163(BX908798|pid:none) Parachlamydia-related symbiont ... 70 2e-10
CP000853_2180(CP000853|pid:none) Alkaliphilus oremlandii OhILAs,... 70 2e-10
CP000680_1318(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 70 2e-10
CP000740_1081(CP000740|pid:none) Sinorhizobium medicae WSM419 pl... 70 2e-10
CP000768_155(CP000768|pid:none) Campylobacter jejuni subsp. doyl... 70 2e-10
CP000936_1359(CP000936|pid:none) Streptococcus pneumoniae Hungar... 70 2e-10
AP009324_1544(AP009324|pid:none) Staphylococcus aureus subsp. au... 70 2e-10
CP000678_805(CP000678|pid:none) Methanobrevibacter smithii ATCC ... 70 2e-10
FM178380_1031(FM178380|pid:none) Aliivibrio salmonicida LFI1238 ... 70 2e-10
AP008971_651(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 70 2e-10
CP001393_1331(CP001393|pid:none) Anaerocellum thermophilum DSM 6... 70 2e-10
CP000111_1282(CP000111|pid:none) Prochlorococcus marinus str. MI... 70 2e-10
CP000575_87(CP000575|pid:none) Staphylothermus marinus F1, compl... 70 2e-10
(P45171) RecName: Full=Spermidine/putrescine import ATP-binding ... 70 2e-10
CP000814_165(CP000814|pid:none) Campylobacter jejuni subsp. jeju... 70 2e-10
CP000254_2120(CP000254|pid:none) Methanospirillum hungatei JF-1,... 69 3e-10
CP001056_1324(CP001056|pid:none) Clostridium botulinum B str. Ek... 69 3e-10
AE009948_455(AE009948|pid:none) Streptococcus agalactiae 2603V/R... 69 3e-10
(Q160Y9) RecName: Full=Zinc import ATP-binding protein znuC; ... 69 3e-10
CP000096_1027(CP000096|pid:none) Pelodictyon luteolum DSM 273, c... 69 3e-10
AE017198_1587(AE017198|pid:none) Lactobacillus johnsonii NCC 533... 69 3e-10
CP001344_4112(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 69 3e-10
CP000753_4260(CP000753|pid:none) Shewanella baltica OS185, compl... 69 3e-10
AE015929_1540(AE015929|pid:none) Staphylococcus epidermidis ATCC... 69 3e-10
CP001078_1249(CP001078|pid:none) Clostridium botulinum E3 str. A... 69 3e-10
AP009178_349(AP009178|pid:none) Nitratiruptor sp. SB155-2 genomi... 69 3e-10
AB172155_1(AB172155|pid:none) Macaca fascicularis brain cDNA clo... 69 3e-10
CP000612_2630(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 69 3e-10
BA000040_6911(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 69 3e-10
AL591985_1304(AL591985|pid:none) Sinorhizobium meliloti 1021 pla... 69 3e-10
GM017008_112(GM017008|pid:none) Sequence 1838 from Patent EP1923... 69 3e-10
CP000828_3904(CP000828|pid:none) Acaryochloris marina MBIC11017,... 69 3e-10
CP000759_820(CP000759|pid:none) Ochrobactrum anthropi ATCC 49188... 69 3e-10
CP001095_955(CP001095|pid:none) Bifidobacterium longum subsp. in... 69 3e-10
AP006878_1453(AP006878|pid:none) Thermococcus kodakarensis KOD1 ... 69 3e-10
CP000729_24(CP000729|pid:none) Clostridium botulinum F str. Lang... 69 3e-10
CP000746_1716(CP000746|pid:none) Actinobacillus succinogenes 130... 69 3e-10
CP000563_78(CP000563|pid:none) Shewanella baltica OS155, complet... 69 3e-10
CP000749_434(CP000749|pid:none) Marinomonas sp. MWYL1, complete ... 69 3e-10
CP001634_1633(CP001634|pid:none) Kosmotoga olearia TBF 19.5.1, c... 69 4e-10
CP000021_1099(CP000021|pid:none) Vibrio fischeri ES114 chromosom... 69 4e-10
CP001133_1189(CP001133|pid:none) Vibrio fischeri MJ11 chromosome... 69 4e-10
CP000492_369(CP000492|pid:none) Chlorobium phaeobacteroides DSM ... 69 4e-10
(P69874) RecName: Full=Spermidine/putrescine import ATP-binding ... 69 4e-10
CP000352_705(CP000352|pid:none) Ralstonia metallidurans CH34, co... 69 4e-10
CP000826_2765(CP000826|pid:none) Serratia proteamaculans 568, co... 69 4e-10
AF043280_1(AF043280|pid:none) Streptococcus salivarius ABC trans... 69 4e-10
CP001615_2154(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 69 4e-10
CP000660_1066(CP000660|pid:none) Pyrobaculum arsenaticum DSM 135... 69 4e-10
CP001398_605(CP001398|pid:none) Thermococcus gammatolerans EJ3, ... 69 4e-10
AE009950_744(AE009950|pid:none) Pyrococcus furiosus DSM 3638, co... 69 4e-10
AM746676_9323(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 69 4e-10
CP000800_1226(CP000800|pid:none) Escherichia coli E24377A, compl... 69 4e-10
AE017198_1149(AE017198|pid:none) Lactobacillus johnsonii NCC 533... 69 4e-10
CP000671_752(CP000671|pid:none) Haemophilus influenzae PittEE, c... 69 4e-10
CP000057_1589(CP000057|pid:none) Haemophilus influenzae 86-028NP... 69 4e-10
CP000442_4(CP000442|pid:none) Burkholderia ambifaria AMMD chromo... 69 4e-10
AF298223_3(AF298223|pid:none) Methanococcus maripaludis anaerobi... 69 4e-10
CP001173_1127(CP001173|pid:none) Helicobacter pylori G27, comple... 69 4e-10
(Q31ZK0) RecName: Full=Spermidine/putrescine import ATP-binding ... 69 4e-10
(A1AA20) RecName: Full=Spermidine/putrescine import ATP-binding ... 69 4e-10
CP000679_961(CP000679|pid:none) Caldicellulosiruptor saccharolyt... 69 4e-10
CP001052_2254(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 69 4e-10
CR936257_1815(CR936257|pid:none) Natronomonas pharaonis DSM 2160... 69 4e-10
CP000863_1440(CP000863|pid:none) Acinetobacter baumannii ACICU, ... 69 4e-10
CU928178_9(CU928178|pid:none) Zygosaccharomyces rouxii strain CB... 69 4e-10
CP000826_2352(CP000826|pid:none) Serratia proteamaculans 568, co... 69 4e-10
AE015451_1709(AE015451|pid:none) Pseudomonas putida KT2440 compl... 69 4e-10
CP000896_1276(CP000896|pid:none) Acholeplasma laidlawii PG-8A, c... 69 4e-10
CP001277_2065(CP001277|pid:none) Candidatus Hamiltonella defensa... 69 4e-10
CP000411_567(CP000411|pid:none) Oenococcus oeni PSU-1, complete ... 69 5e-10
CP000152_1528(CP000152|pid:none) Burkholderia sp. 383 chromosome... 69 5e-10
(Q04G50) RecName: Full=Spermidine/putrescine import ATP-binding ... 69 5e-10
(Q5HQ70) RecName: Full=Spermidine/putrescine import ATP-binding ... 69 5e-10
CP001146_388(CP001146|pid:none) Dictyoglomus thermophilum H-6-12... 69 5e-10
CP000924_1916(CP000924|pid:none) Thermoanaerobacter pseudethanol... 69 5e-10
(Q9CP06) RecName: Full=Spermidine/putrescine import ATP-binding ... 69 5e-10
CP000949_1270(CP000949|pid:none) Pseudomonas putida W619, comple... 69 5e-10
CP001053_2471(CP001053|pid:none) Burkholderia phytofirmans PsJN ... 69 5e-10
EU186381_5(EU186381|pid:none) Agrobacterium rhizogenes plasmid p... 69 5e-10
(A3DDF6) RecName: Full=Spermidine/putrescine import ATP-binding ... 69 5e-10
CP000745_1219(CP000745|pid:none) Methanococcus maripaludis C7, c... 69 5e-10

>(Q54W19) RecName: Full=ABC transporter D family member 1; AltName:
Full=ABC transporter ABCD.1;
Length = 734

Score = 404 bits (1038), Expect = e-111
Identities = 205/225 (91%), Positives = 205/225 (91%)
Frame = +2

Query: 695 QLYSKISINVKRGNNLLIMGPSGSGKSSLIRIINGLWPFFKGSIDRPENGDMFFLPQQPY 874
QLYSKISINVKRGNNLLIMGPSGSGKSSLIRIINGLWPFFKGSIDRPENGDMFFLPQQPY
Sbjct: 506 QLYSKISINVKRGNNLLIMGPSGSGKSSLIRIINGLWPFFKGSIDRPENGDMFFLPQQPY 565

Query: 875 LIFGTLEEQILYPFSKKQKRIPKSIMRELFQRFEIDYLLDRERFIKKSAQVNDLTHNWLN 1054
LIFGTLEEQILYPFSKKQKRIPKSIMRELFQRFEIDYLLDRERFIKKSAQVNDLTHNWLN
Sbjct: 566 LIFGTLEEQILYPFSKKQKRIPKSIMRELFQRFEIDYLLDRERFIKKSAQVNDLTHNWLN 625

Query: 1055 QLSPGEQQLIAIIRLIYHKPKFALMDESTSSIPQSLEERVYYVAKELGITIISVGHRISL 1234
QLSPGEQQLIAIIRLIYHKPKFALMDESTSSIPQSLEERVYYVAKELGITIISVGHRISL
Sbjct: 626 QLSPGEQQLIAIIRLIYHKPKFALMDESTSSIPQSLEERVYYVAKELGITIISVGHRISL 685

Query: 1235 LKYHSTLLRFDKDKNWYLEDXXXXXXXXXXXXXXXXXXXXKIAED 1369
LKYHSTLLRFDKDKNWYLED KIAED
Sbjct: 686 LKYHSTLLRFDKDKNWYLEDIINQNNQSNNINNNNNNNTNKIAED 730

Score = 299 bits (766), Expect = 1e-79
Identities = 151/166 (90%), Positives = 151/166 (90%)
Frame = +3

Query: 165 YNQNDERLKKIKENKFDWALFKRFINIIKILYAKPVIPLTLFLILFGNGFAQTYVSKFTG 344
YNQNDERLKKIKENKFDWALFKRFINIIKILYAKPVIPLTLFLILFGNGFAQTYVSKFTG
Sbjct: 26 YNQNDERLKKIKENKFDWALFKRFINIIKILYAKPVIPLTLFLILFGNGFAQTYVSKFTG 85

Query: 345 ILLADIYASFTSGDKVFFLSSVLKXXXXXXXXXXXXXXXNFIVSIMAWNWRKTLCLYIQN 524
ILLADIYASFTSGDKVFFLSSVLK NFIVSIMAWNWRKTLCLYIQN
Sbjct: 86 ILLADIYASFTSGDKVFFLSSVLKAGFAIGGSALLAAIINFIVSIMAWNWRKTLCLYIQN 145

Query: 525 VYFKKSLFYKILAFDDRIDNPDQRITSDIDNFTTLLASIVSQCITG 662
VYFKKSLFYKILAFDDRIDNPDQRITSDIDNFTTLLASIVSQCITG
Sbjct: 146 VYFKKSLFYKILAFDDRIDNPDQRITSDIDNFTTLLASIVSQCITG 191

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,657,143,482
Number of extensions: 32511075
Number of successful extensions: 150154
Number of sequences better than 10.0: 21170
Number of HSP's gapped: 140216
Number of HSP's successfully gapped: 23387
Length of query: 457
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 325
Effective length of database: 623,955,076
Effective search space: 202785399700
Effective search space used: 202785399700
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.64 gvh: 0.35 alm: 0.26 top: 0.27 tms: 0.13 mit: 0.29 mip: 0.00
nuc: 0.03 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 1.00 m3b: 0.00 m_ : 0.00

28.0 %: endoplasmic reticulum
20.0 %: mitochondrial
16.0 %: plasma membrane
8.0 %: extracellular, including cell wall
8.0 %: nuclear
4.0 %: cytoskeletal
4.0 %: Golgi
4.0 %: cytoplasmic
4.0 %: peroxisomal
4.0 %: vesicles of secretory system

>> prediction for Contig-U12436-1 is end

VS (DIR, S) 0
VH (FL, L) 1
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0