| Contig-U12427-1 |
| Contig ID |
Contig-U12427-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1880 |
| Chromosome number (1..6, M) |
5 |
| Chromosome length |
5062330 |
| Start point |
1996908 |
| End point |
1998788 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
3 |
| Number of EST |
6 |
| Link to clone list |
U12427 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.30 |
| Homology vs DNA |
Query= Contig-U12427-1 (Contig-U12427-1Q) /CSM_Contig/Contig-U12427-1Q.Seq.d
(1890 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ421575) Dictyostelium discoideum cDNA clone:ddv43k02, 5' ... 1298 0.0 1
(BJ438446) Dictyostelium discoideum cDNA clone:ddv37p21, 3' ... 1092 0.0 1
(BJ420019) Dictyostelium discoideum cDNA clone:ddv37p21, 5' ... 1072 0.0 1
(BJ438644) Dictyostelium discoideum cDNA clone:ddv38f01, 3' ... 1035 0.0 1
(BJ440257) Dictyostelium discoideum cDNA clone:ddv43k02, 3' ... 1003 0.0 2
(BJ420047) Dictyostelium discoideum cDNA clone:ddv38f01, 5' ... 971 0.0 1
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 40 4e-07 17
(AE014842) Plasmodium falciparum 3D7 chromosome 11 section 7... 36 2e-05 16
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 36 6e-05 22
(AE014840) Plasmodium falciparum 3D7 chromosome 11 section 5... 40 7e-04 18
(CR382400) Plasmodium falciparum chromosome 6, complete sequ... 34 7e-04 18
(AL929355) Plasmodium falciparum strain 3D7, chromosome 9; s... 36 0.003 17
(BA000016) Clostridium perfringens str. 13 DNA, complete gen... 38 0.005 21
(BJ383981) Dictyostelium discoideum cDNA clone:ddc47i20, 3' ... 42 0.008 2
(CP000246) Clostridium perfringens ATCC 13124, complete genome. 42 0.011 20
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 42 0.012 14
(CP000312) Clostridium perfringens SM101, complete genome. 36 0.012 19
(CS468878) Sequence 69 from Patent EP1748080. 44 0.018 12
(CS468877) Sequence 68 from Patent EP1748080. 44 0.018 12
(CS419355) Sequence 69 from Patent WO2006094836. 44 0.018 12
(CS419354) Sequence 68 from Patent WO2006094836. 44 0.018 12
(AL844509) Plasmodium falciparum chromosome 13. 40 0.021 17
(AE014822) Plasmodium falciparum 3D7 chromosome 14 section 7... 36 0.029 19
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 38 0.030 10
(AE014837) Plasmodium falciparum 3D7 chromosome 11 section 2... 34 0.033 16
(CP000776) Campylobacter hominis ATCC BAA-381, complete genome. 34 0.037 20
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255... 38 0.045 21
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 36 0.056 21
(AC163048) Bos taurus clone CH240-131I19, WORKING DRAFT SEQU... 46 0.057 7
(CP000770) Candidatus Sulcia muelleri GWSS, complete genome. 36 0.062 15
(AC172929) Bos taurus clone CH240-280P12, WORKING DRAFT SEQU... 46 0.068 9
(AC096737) Homo sapiens BAC clone RP11-178N2 from 4, complet... 40 0.081 9
(CR548612) Paramecium tetraurelia macronuclear largest chrom... 34 0.088 26
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 36 0.088 10
(AE014852) Plasmodium falciparum 3D7 chromosome 12, section ... 34 0.12 14
(BX663494) Zebrafish DNA sequence from clone CH211-234N7 in ... 38 0.13 9
(AE014830) Plasmodium falciparum 3D7 chromosome 10 section 2... 34 0.13 17
(CP000716) Thermosipho melanesiensis BI429, complete genome. 40 0.13 21
(AL355306) Human DNA sequence from clone RP5-947P14 on chrom... 36 0.14 9
(AC205681) Solanum lycopersicum chromosome 5 clone C05HBa002... 34 0.16 9
(AE014836) Plasmodium falciparum 3D7 chromosome 11 section 1... 32 0.17 16
(AC016636) Homo sapiens chromosome 5 clone RP11-313P15, comp... 44 0.18 4
(AE002122) Ureaplasma parvum serovar 3 str. ATCC 700970 sect... 40 0.19 5
(AE014816) Plasmodium falciparum 3D7 chromosome 14 section 1... 32 0.20 15
(EK120383) 1092963360836 Global-Ocean-Sampling_GS-31-01-01-1... 34 0.23 2
(EK128214) 1092995802120 Global-Ocean-Sampling_GS-31-01-01-1... 34 0.23 2
(BX276114) Zebrafish DNA sequence from clone CH211-176L11 in... 42 0.26 6
(CR808728) GR0AAA31CC11FM1 INRA BAC Bos taurus genomic clone... 50 0.31 1
(AA707668) zj29f12.s1 Soares_fetal_liver_spleen_1NFLS_S1 Hom... 50 0.31 1
(AC005505) Plasmodium falciparum chromosome 12 clone 3D7, **... 34 0.39 14
(AE014849) Plasmodium falciparum 3D7 chromosome 12, section ... 34 0.44 16
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 42 0.46 19
(AE014828) Plasmodium falciparum 3D7 chromosome 14 section 1... 34 0.47 15
(AM439175) Vitis vinifera contig VV78X188667.3, whole genome... 36 0.51 4
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen... 34 0.51 14
(AC006281) Plasmodium falciparum chromosome 12 clone 3D7, **... 36 0.53 14
(AE014845) Plasmodium falciparum 3D7 chromosome 12, section ... 34 0.54 15
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 32 0.54 23
(AE014821) Plasmodium falciparum 3D7 chromosome 14 section 6... 32 0.54 15
(AE014835) Plasmodium falciparum 3D7 chromosome 10 section 7... 34 0.58 14
(AE014851) Plasmodium falciparum 3D7 chromosome 12, section ... 34 0.58 13
(AE014818) Plasmodium falciparum 3D7 chromosome 14 section 3... 32 0.63 14
(DQ866052) Cydistomyia duplonotata mitochondrion, complete g... 28 0.65 9
(AL844507) Plasmodium falciparum chromosome 8. 38 0.66 18
(AE014827) Plasmodium falciparum 3D7 chromosome 14 section 1... 36 0.67 14
(CT573401) M.truncatula DNA sequence from clone MTH2-85N4 on... 40 0.68 7
(CR382398) Plasmodium falciparum chromosome 6, complete sequ... 34 0.71 15
(DQ870926) Bombus ignitus mitochondrion, complete genome. 34 0.79 7
(DR572524) WS00732.B21_E04 WS-PS-N-A-8 Picea glauca cDNA clo... 40 0.82 2
(AF534334) Lycopersicon hirsutum clone P4_600 RGA marker seq... 38 0.88 2
(EK202482) 1095460062231 Global-Ocean-Sampling_GS-31-01-01-1... 34 0.89 2
(AC187666) Microcebus murinus clone CH257-513H19, WORKING DR... 44 0.96 11
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 32 0.97 15
(AL035477) Plasmodium falciparum MAL4P4. 36 1.1 16
(AQ410513) HS_5120_A2_A05_SP6E RPCI-11 Human Male BAC Librar... 46 1.1 2
(AM470431) Vitis vinifera contig VV79X000790.2, whole genome... 40 1.1 3
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 40 1.1 20
(AC219528) Bos taurus clone CH240-331F16, WORKING DRAFT SEQU... 48 1.2 1
(AC185190) Felis catus clone RP86-4K6, WORKING DRAFT SEQUENC... 48 1.2 1
(AC169224) Bos taurus clone CH240-223B5, WORKING DRAFT SEQUE... 48 1.2 1
(AM851512) Venerupis (Ruditapes) decussatus EST, 5' end sequ... 32 1.2 4
(AC004002) Homo sapiens BAC clone CTA-356F9 from 7, complete... 36 1.2 6
(AJ303726) Plasmodium chabaudi genome survey sequence, clone... 46 1.3 2
(CT025839) Medicago truncatula chromosome 5 clone mth4-19c21... 40 1.4 8
(AL929354) Plasmodium falciparum strain 3D7, chromosome 5, s... 34 1.4 17
(AQ525433) HS_5228_B2_G07_T7A RPCI-11 Human Male BAC Library... 46 1.4 2
(CR790385) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 1.4 13
(CP000382) Clostridium novyi NT, complete genome. 38 1.4 18
(AX346651) Sequence 1722 from Patent WO0200928. 32 1.5 6
(BZ462780) BONBN31TR BO_1.6_2_KB_tot Brassica oleracea genom... 32 1.5 4
(AL929353) Plasmodium falciparum strain 3D7, chromosome 5, s... 32 1.5 17
(CR388046) Zebrafish DNA sequence from clone DKEY-50E6 in li... 42 1.6 10
(AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2... 36 1.7 13
(CR759888) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 38 1.7 9
(AC175094) Bos taurus clone CH240-461A8, WORKING DRAFT SEQUE... 38 1.7 7
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 42 1.7 19
(CP000361) Arcobacter butzleri RM4018, complete genome. 40 1.8 20
(AC170139) Bos taurus clone CH240-215P2, WORKING DRAFT SEQUE... 34 1.8 11
(CP000061) Aster yellows witches'-broom phytoplasma AYWB, co... 34 1.8 21
(DV139536) CV03123A1C04.f1 CV03-normalized library Euphorbia... 40 1.9 2
>(BJ421575) Dictyostelium discoideum cDNA clone:ddv43k02, 5' end,
single read.
Length = 655
Score = 1298 bits (655), Expect = 0.0
Identities = 655/655 (100%)
Strand = Plus / Plus
Query: 452 ataaataatttaattgaagaattgaaaaccaatatatctttttcaaaaatcaaatcattg 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataaataatttaattgaagaattgaaaaccaatatatctttttcaaaaatcaaatcattg 60
Query: 512 aattcctttattatgtatatgacaaacccctatgtaccatataattatccttatttttta 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aattcctttattatgtatatgacaaacccctatgtaccatataattatccttatttttta 120
Query: 572 aatgatgtagatttttacattccactaaaccaattagttatttattctttaaacgtacct 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatgatgtagatttttacattccactaaaccaattagttatttattctttaaacgtacct 180
Query: 632 tcttttacatttttaaatccatcccaagttgaaattacattgggtaaaggttttgatatt 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcttttacatttttaaatccatcccaagttgaaattacattgggtaaaggttttgatatt 240
Query: 692 tcttcattgtctaattttaatgatgtatcacatttcaataattcatgctccatttcatta 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcttcattgtctaattttaatgatgtatcacatttcaataattcatgctccatttcatta 300
Query: 752 aaagttttggagggatcaatatcaagcttcccattttctaaagcaaataatcttttaaaa 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaagttttggagggatcaatatcaagcttcccattttctaaagcaaataatcttttaaaa 360
Query: 812 tctgtaacaatacaaagctatattgataaacctttgaatttaattgatttgagtaactta 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tctgtaacaatacaaagctatattgataaacctttgaatttaattgatttgagtaactta 420
Query: 872 aaaattacatctttaataatgtcaaatgtttcaaatttattcaacattaacaacgaaata 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaattacatctttaataatgtcaaatgtttcaaatttattcaacattaacaacgaaata 480
Query: 932 ccatttacaaattttccttcaacaattcaaacattcaattttttggatggaaagattaac 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccatttacaaattttccttcaacaattcaaacattcaattttttggatggaaagattaac 540
Query: 992 agtattcctaaaaatataaatgtagaatttatttcatttagaaataattcaatgagtggt 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agtattcctaaaaatataaatgtagaatttatttcatttagaaataattcaatgagtggt 600
Query: 1052 ccaattggtaaattaagtcaatttggaagcaatgtaaaaaatttatttatttcaa 1106
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccaattggtaaattaagtcaatttggaagcaatgtaaaaaatttatttatttcaa 655
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 2,370,364,033
Number of extensions: 157021730
Number of successful extensions: 13898964
Number of sequences better than 10.0: 270
Length of query: 1890
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1866
Effective length of database: 97,308,875,965
Effective search space: 181578362550690
Effective search space used: 181578362550690
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7. 3 |
| Homology vs Protein |
Query= Contig-U12427-1 (Contig-U12427-1Q) /CSM_Contig/Contig-U12427-1Q.Seq.d
(1890 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC117081_39(AC117081|pid:none) Dictyostelium discoideum chromoso... 143 2e-34
AC117081_43(AC117081|pid:none) Dictyostelium discoideum chromoso... 142 5e-34
AC116982_41(AC116982|pid:none) Dictyostelium discoideum chromoso... 136 4e-32
AC116956_34(AC116956|pid:none) Dictyostelium discoideum chromoso... 127 4e-31
AC116963_42(AC116963|pid:none) Dictyostelium discoideum chromoso... 137 2e-30
AC116920_24(AC116920|pid:none) Dictyostelium discoideum chromoso... 118 1e-29
AC116920_25(AC116920|pid:none) Dictyostelium discoideum chromoso... 116 4e-29
AC117075_64(AC117075|pid:none) Dictyostelium discoideum chromoso... 131 1e-28
AC116920_20(AC116920|pid:none) Dictyostelium discoideum chromoso... 116 1e-28
AC116967_7(AC116967|pid:none) Dictyostelium discoideum chromosom... 116 6e-28
AC116960_61(AC116960|pid:none) Dictyostelium discoideum chromoso... 114 2e-27
AC116967_8(AC116967|pid:none) Dictyostelium discoideum chromosom... 116 3e-26
AC117075_65(AC117075|pid:none) Dictyostelium discoideum chromoso... 102 6e-20
AC117075_41(AC117075|pid:none) Dictyostelium discoideum chromoso... 84 4e-17
AC117072_39(AC117072|pid:none) Dictyostelium discoideum chromoso... 48 2e-06
EU579525_1(EU579525|pid:none) Plasmodium yoelii sporozoite and l... 50 2e-04
CP000409_413(CP000409|pid:none) Rickettsia canadensis str. McKie... 50 3e-04
AC115680_4(AC115680|pid:none) Dictyostelium discoideum chromosom... 50 4e-04
CP000087_313(CP000087|pid:none) Rickettsia bellii RML369-C, comp... 49 6e-04
A71661(A71661) hypothetical protein RP563 - Rickettsia prowazeki... 48 0.001
AC115612_9(AC115612|pid:none) Dictyostelium discoideum chromosom... 47 0.002
AC115599_1(AC115599|pid:none) Dictyostelium discoideum chromosom... 46 0.004
AL035475_43(AL035475|pid:none) Plasmodium falciparum MAL4P2. &A... 46 0.005
U85963_1(U85963|pid:none) Plasmodium falciparum asparagine-rich ... 46 0.005
AE014185_202(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 46 0.005
AL844506_177(AL844506|pid:none) Plasmodium falciparum 3D7 chromo... 45 0.009
AE014186_272(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 45 0.009
AC116963_25(AC116963|pid:none) Dictyostelium discoideum chromoso... 45 0.009
AF402141_2(AF402141|pid:none) Schizophyllum commune mitochondria... 44 0.027
AL844509_369(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 44 0.027
AY459293_1(AY459293|pid:none) Plasmodium falciparum histone acet... 43 0.035
CP000685_891(CP000685|pid:none) Flavobacterium johnsoniae UW101,... 43 0.046
AL844505_40(AL844505|pid:none) Plasmodium falciparum 3D7 chromos... 43 0.046
(B2X1Z3) RecName: Full=DNA-directed RNA polymerase subunit beta'... 43 0.046
AC116984_70(AC116984|pid:none) Dictyostelium discoideum chromoso... 42 0.060
AC116924_8(AC116924|pid:none) Dictyostelium discoideum chromosom... 42 0.078
AE001362_113(AE001362|pid:none) Plasmodium falciparum 3D7 chromo... 42 0.078
AC116984_63(AC116984|pid:none) Dictyostelium discoideum chromoso... 42 0.078
CR940347_554(CR940347|pid:none) Theileria annulata strain Ankara... 42 0.078
AL844509_611(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 42 0.10
AL844509_172(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 42 0.10
AC116984_67(AC116984|pid:none) Dictyostelium discoideum chromoso... 42 0.10
AL844509_279(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 42 0.10
AE017243_283(AE017243|pid:none) Mycoplasma hyopneumoniae J, comp... 41 0.13
AC169177_29(AC169177|pid:none) Medicago truncatula chromosome 7 ... 41 0.13
AE014188_472(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 41 0.13
AL844509_328(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 41 0.13
AL844509_609(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 41 0.17
EU004203_6(EU004203|pid:none) Saccharomyces cerevisiae YJM789 mi... 40 0.23
GN110812_1(GN110812|pid:none) Sequence 15593 from Patent WO20090... 40 0.23
AF053994_1(AF053994|pid:none) Lycopersicon esculentum Hcr2-0A (H... 40 0.23
AL844505_292(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 40 0.23
AL844504_164(AL844504|pid:none) Plasmodium falciparum 3D7 chromo... 40 0.23
AC116100_9(AC116100|pid:none) Dictyostelium discoideum chromosom... 40 0.23
AL031745_67(AL031745|pid:none) Plasmodium falciparum DNA from MA... 40 0.23
CR382400_30(CR382400|pid:none) Plasmodium falciparum chromosome ... 40 0.23
AC137994_39(AC137994|pid:none) Medicago truncatula clone mth2-23... 40 0.23
BA000026_794(BA000026|pid:none) Mycoplasma penetrans HF-2 DNA, c... 40 0.23
AE017245_319(AE017245|pid:none) Mycoplasma synoviae 53, complete... 40 0.23
AC007651_6(AC007651|pid:none) Arabidopsis thaliana chromosome I ... 40 0.23
CR382401_38(CR382401|pid:none) Plasmodium falciparum chromosome ... 40 0.23
AE014188_81(AE014188|pid:none) Plasmodium falciparum 3D7 chromos... 40 0.30
AL844506_42(AL844506|pid:none) Plasmodium falciparum 3D7 chromos... 40 0.30
(Q8ILR9) RecName: Full=LRR domain-containing protein PF14_0175; ... 40 0.30
AE014188_317(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 40 0.30
CP000685_599(CP000685|pid:none) Flavobacterium johnsoniae UW101,... 40 0.30
AC133779_2(AC133779|pid:none) Medicago truncatula clone mth2-27n... 40 0.30
CP000053_896(CP000053|pid:none) Rickettsia felis URRWXCal2, comp... 40 0.30
AF053996_1(AF053996|pid:none) Lycopersicon pimpinellifolium Hcr2... 40 0.39
AL844505_80(AL844505|pid:none) Plasmodium falciparum 3D7 chromos... 40 0.39
AL844508_260(AL844508|pid:none) Plasmodium falciparum 3D7 chromo... 40 0.39
EF471737_1(EF471737|pid:none) Solanum tuberosum BRI1 protein (BR... 40 0.39
AE014188_356(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 40 0.39
AL844509_417(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 39 0.51
AM910992_72(AM910992|pid:none) Plasmodium knowlesi strain H chro... 39 0.51
AL844507_104(AL844507|pid:none) Plasmodium falciparum 3D7 chromo... 39 0.51
AE014185_311(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 39 0.51
BA000021_481(BA000021|pid:none) Wigglesworthia glossinidia endos... 39 0.66
AL844506_138(AL844506|pid:none) Plasmodium falciparum 3D7 chromo... 39 0.66
GN102999_1(GN102999|pid:none) Sequence 7780 from Patent WO200903... 39 0.66
AE014188_63(AE014188|pid:none) Plasmodium falciparum 3D7 chromos... 39 0.66
EU189478_1(EU189478|pid:none) Alyssum alyssoides flagellin-sensi... 39 0.86
AL844509_128(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 39 0.86
CP000728_276(CP000728|pid:none) Clostridium botulinum F str. Lan... 39 0.86
AF251283_1(AF251283|pid:none) Plasmodium falciparum CCAAT-box DN... 39 0.86
CP000500_417(CP000500|pid:none) Pichia stipitis CBS 6054 chromos... 39 0.86
AF063866_241(AF063866|pid:none) Melanoplus sanguinipes entomopox... 39 0.86
AE014187_372(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 38 1.1
CP000013_347(CP000013|pid:none) Borrelia garinii PBi, complete g... 38 1.1
D50617_88(D50617|pid:none) Saccharomyces cerevisiae DNA, chromos... 38 1.1
CP001279_1188(CP001279|pid:none) Nautilia profundicola AmH, comp... 38 1.1
AY639600_2(AY639600|pid:none) Lycopersicon pimpinellifolium orio... 38 1.1
EU579524_1(EU579524|pid:none) Plasmodium berghei sporozoite and ... 38 1.1
AF250284_112(AF250284|pid:none) Amsacta moorei entomopoxvirus, c... 38 1.1
AE014186_421(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 38 1.1
AL844505_35(AL844505|pid:none) Plasmodium falciparum 3D7 chromos... 38 1.5
AC116984_172(AC116984|pid:none) Dictyostelium discoideum chromos... 38 1.5
AY534123_4(AY534123|pid:none) Aegilops tauschii transposons Casp... 38 1.5
AE014188_358(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 38 1.5
AJ307410_6(AJ307410|pid:none) Yarrowia lipolytica complete mitoc... 38 1.5
AJ634268_11(AJ634268|pid:none) Kluyveromyces thermotolerans comp... 38 1.5
AL844507_19(AL844507|pid:none) Plasmodium falciparum 3D7 chromos... 38 1.5
(Q54QG7) RecName: Full=Metabotropic glutamate receptor-like prot... 38 1.5
FM992688_387(FM992688|pid:none) Candida dubliniensis CD36 chromo... 38 1.5
AE014187_717(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 38 1.5
AY328139_1(AY328139|pid:none) Plasmodium gallinaceum clone Pgs-c... 37 1.9
AC116957_18(AC116957|pid:none) Dictyostelium discoideum chromoso... 37 1.9
AL844509_596(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 37 1.9
DQ993352_1(DQ993352|pid:none) Staphylococcus aureus strain YSSA1... 37 1.9
CP000847_808(CP000847|pid:none) Rickettsia akari str. Hartford, ... 37 1.9
AL844505_226(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 37 1.9
X72700_2(X72700|pid:none) S.aureus genes for S and F components ... 37 1.9
EF571802_1(EF571802|pid:none) Staphylococcus aureus strain US21 ... 37 1.9
CP000683_628(CP000683|pid:none) Rickettsia massiliae MTU5, compl... 37 1.9
EF571672_1(EF571672|pid:none) Staphylococcus aureus strain L13 P... 37 1.9
AC147430_6(AC147430|pid:none) Medicago truncatula clone mth2-71e... 37 1.9
(P47906) RecName: Full=Ribosomal protein VAR1, mitochondrial; &... 37 1.9
AE014186_94(AE014186|pid:none) Plasmodium falciparum 3D7 chromos... 37 1.9
EF571829_1(EF571829|pid:none) Staphylococcus aureus strain US54 ... 37 1.9
(Q8L899) RecName: Full=Systemin receptor SR160; EC=2.7.... 37 1.9
AC116956_32(AC116956|pid:none) Dictyostelium discoideum chromoso... 37 1.9
AB006796_1(AB006796|pid:none) Staphylococcus aureus genes for Lu... 37 1.9
(Q8GUQ5) RecName: Full=Brassinosteroid LRR receptor kinase; ... 37 1.9
(Q54RP7) RecName: Full=Probable serine/threonine-protein kinase ... 37 1.9
BA000033_1379(BA000033|pid:none) Staphylococcus aureus subsp. au... 37 1.9
CP000939_301(CP000939|pid:none) Clostridium botulinum B1 str. Ok... 37 2.5
S28832(S28832) microtubule-associated protein H1 (clone KS3.1) -... 37 2.5
AF063866_239(AF063866|pid:none) Melanoplus sanguinipes entomopox... 37 2.5
AF012825_170(AF012825|pid:none) Ectromelia virus strain Moscow, ... 37 2.5
EF471736_1(EF471736|pid:none) Solanum pimpinellifolium BRI1 prot... 37 2.5
AC117072_72(AC117072|pid:none) Dictyostelium discoideum chromoso... 37 2.5
AE014185_77(AE014185|pid:none) Plasmodium falciparum 3D7 chromos... 37 2.5
AC116984_134(AC116984|pid:none) Dictyostelium discoideum chromos... 37 2.5
BX293980_501(BX293980|pid:none) Mycoplasma mycoides subsp. mycoi... 37 2.5
AP009180_88(AP009180|pid:none) Candidatus Carsonella ruddii PV D... 37 2.5
S32211(S32211)leucocidin chain S - Staphylococcus aureus 37 2.5
CR940353_675(CR940353|pid:none) Theileria annulata strain Ankara... 37 2.5
AM910991_366(AM910991|pid:none) Plasmodium knowlesi strain H chr... 37 2.5
AE009951_877(AE009951|pid:none) Fusobacterium nucleatum subsp. n... 37 2.5
CP001184_493(CP001184|pid:none) Ureaplasma urealyticum serovar 1... 37 2.5
AE006641_342(AE006641|pid:none) Sulfolobus solfataricus P2, comp... 37 2.5
EF394367_1(EF394367|pid:none) Triticum aestivum clone ZZS860 Tax... 37 3.3
FN357390_5(FN357390|pid:none) Schistosoma mansoni genome sequenc... 37 3.3
AP009180_176(AP009180|pid:none) Candidatus Carsonella ruddii PV ... 37 3.3
AE014188_70(AE014188|pid:none) Plasmodium falciparum 3D7 chromos... 37 3.3
EF571751_1(EF571751|pid:none) Staphylococcus aureus strain SA72 ... 37 3.3
CR940353_530(CR940353|pid:none) Theileria annulata strain Ankara... 37 3.3
AF063866_140(AF063866|pid:none) Melanoplus sanguinipes entomopox... 36 4.3
AL035476_58(AL035476|pid:none) Plasmodium falciparum MAL4P3. &A... 36 4.3
AE014187_556(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 36 4.3
CP000962_276(CP000962|pid:none) Clostridium botulinum A3 str. Lo... 36 4.3
CP001083_277(CP001083|pid:none) Clostridium botulinum Ba4 str. 6... 36 4.3
CP001403_1803(CP001403|pid:none) Sulfolobus islandicus Y.G.57.14... 36 4.3
CP000102_948(CP000102|pid:none) Methanosphaera stadtmanae DSM 30... 36 4.3
AB353126_1(AB353126|pid:none) Pseudomonas putida lukPVS, lukPVF ... 36 4.3
AE014186_384(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 36 4.3
FM992692_440(FM992692|pid:none) Candida dubliniensis CD36 chromo... 36 4.3
AC144564_10(AC144564|pid:none) Medicago truncatula clone mth2-17... 36 4.3
AL844504_192(AL844504|pid:none) Plasmodium falciparum 3D7 chromo... 36 4.3
AC116551_59(AC116551|pid:none) Dictyostelium discoideum chromoso... 36 4.3
AE010299_2846(AE010299|pid:none) Methanosarcina acetivorans str.... 36 4.3
CP000102_879(CP000102|pid:none) Methanosphaera stadtmanae DSM 30... 36 4.3
(Q9C7S5) RecName: Full=Tyrosine-sulfated glycopeptide receptor 1... 36 4.3
AL844507_164(AL844507|pid:none) Plasmodium falciparum 3D7 chromo... 36 4.3
AL844507_121(AL844507|pid:none) Plasmodium falciparum 3D7 chromo... 36 4.3
AL031745_101(AL031745|pid:none) Plasmodium falciparum DNA from M... 36 5.6
AE014185_306(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 36 5.6
CP000685_338(CP000685|pid:none) Flavobacterium johnsoniae UW101,... 36 5.6
AL844507_106(AL844507|pid:none) Plasmodium falciparum 3D7 chromo... 36 5.6
AB066520_1(AB066520|pid:none) Macaca fascicularis brain cDNA clo... 36 5.6
AC117072_19(AC117072|pid:none) Dictyostelium discoideum chromoso... 36 5.6
AL844505_211(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 36 5.6
AC116986_40(AC116986|pid:none) Dictyostelium discoideum chromoso... 36 5.6
AE014188_493(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 36 5.6
AL034558_8(AL034558|pid:none) Plasmodium falciparum MAL3P2, comp... 35 7.3
BA000026_316(BA000026|pid:none) Mycoplasma penetrans HF-2 DNA, c... 35 7.3
EU189481_1(EU189481|pid:none) Brassica rapa cultivar TO1434 flag... 35 7.3
AL844507_30(AL844507|pid:none) Plasmodium falciparum 3D7 chromos... 35 7.3
AP008208_694(AP008208|pid:none) Oryza sativa (japonica cultivar-... 35 7.3
AL844504_250(AL844504|pid:none) Plasmodium falciparum 3D7 chromo... 35 7.3
AM910993_212(AM910993|pid:none) Plasmodium knowlesi strain H chr... 35 7.3
DQ386459_1(DQ386459|pid:none) Mycoplasma hyopneumoniae strain 74... 35 7.3
AP008934_361(AP008934|pid:none) Staphylococcus saprophyticus sub... 35 7.3
AE014187_545(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 35 7.3
AM285306_14(AM285306|pid:none) Spiroplasma citri GII3-3X chromos... 35 7.3
AB016609_1(AB016609|pid:none) Dictyostelium discoideum gene for ... 35 7.3
EU189479_1(EU189479|pid:none) Brassica oleracea cultivar BI16 fl... 35 7.3
CR940347_536(CR940347|pid:none) Theileria annulata strain Ankara... 35 7.3
AL844506_46(AL844506|pid:none) Plasmodium falciparum 3D7 chromos... 35 7.3
(Q54LK8) RecName: Full=Uncharacterized protein DDB_G0286591; 35 7.3
CP001227_462(CP001227|pid:none) Rickettsia peacockii str. Rustic... 35 7.3
EU189471_1(EU189471|pid:none) Brassica carinata flagellin-sensin... 35 7.3
CP000685_2672(CP000685|pid:none) Flavobacterium johnsoniae UW101... 35 7.3
DQ386458_1(DQ386458|pid:none) Mycoplasma hyopneumoniae strain PM... 35 7.3
CP000853_1853(CP000853|pid:none) Alkaliphilus oremlandii OhILAs,... 35 7.3
AK121252_1(AK121252|pid:none) Oryza sativa Japonica Group cDNA c... 35 7.3
AF052661_1(AF052661|pid:none) Campylobacter jejuni chaperone Dna... 35 7.3
(O85213) RecName: Full=Chaperone protein dnaJ; &AL111168_1194(A... 35 7.3
AF119040_4(AF119040|pid:none) Lycopersicon esculentum haplotype ... 35 9.6
AM422018_760(AM422018|pid:none) Candidatus Phytoplasma australie... 35 9.6
AE014186_457(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 35 9.6
AE014185_179(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 35 9.6
AL929354_52(AL929354|pid:none) Plasmodium falciparum strain 3D7,... 35 9.6
CP001348_1305(CP001348|pid:none) Clostridium cellulolyticum H10,... 35 9.6
CP001400_1579(CP001400|pid:none) Sulfolobus islandicus M.14.25, ... 35 9.6
CP000766_885(CP000766|pid:none) Rickettsia rickettsii str. Iowa,... 35 9.6
EF571742_1(EF571742|pid:none) Staphylococcus aureus strain SA6 P... 35 9.6
AL844509_38(AL844509|pid:none) Plasmodium falciparum 3D7 chromos... 35 9.6
JE0387(JE0387) exo-alpha-sialidase (EC 3.2.1.18) - Clostridium t... 35 9.6
EF518520_1(EF518520|pid:none) Pheidole pelor voucher RA0525 cyto... 35 9.6
CP001401_1686(CP001401|pid:none) Sulfolobus islandicus M.16.27, ... 35 9.6
(Q75JZ0) RecName: Full=GATA zinc finger domain-containing protei... 35 9.6
AY268139_1(AY268139|pid:none) Hordeum vulgare BAC 184G9, complet... 35 9.6
CR382138_308(CR382138|pid:none) Debaryomyces hansenii strain CBS... 35 9.6
AE006914_850(AE006914|pid:none) Rickettsia conorii str. Malish 7... 35 9.6
AF047005_1(AF047005|pid:none) Plasmodium falciparum asparagine-r... 35 9.6
AL844504_289(AL844504|pid:none) Plasmodium falciparum 3D7 chromo... 35 9.6
AY157548_1(AY157548|pid:none) Tetrix ceperdides cytochrome b (cy... 35 9.6
EF563999_1(EF563999|pid:none) Phytophthora sojae cellulose synth... 35 9.6
AK111640_1(AK111640|pid:none) Oryza sativa Japonica Group cDNA c... 35 9.6
AP008971_440(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 35 9.6
>AC117081_39(AC117081|pid:none) Dictyostelium discoideum chromosome 2
map 5862124-6045772 strain AX4, complete sequence.
Length = 912
Score = 143 bits (361), Expect(2) = 2e-34
Identities = 79/220 (35%), Positives = 126/220 (57%), Gaps = 6/220 (2%)
Frame = +3
Query: 1203 FFFSQKIQNSNCELISIIDQINSDQRLSFAGVDFYIQSGAIKXXXXXXXXXXXXXXXXXK 1382
+ F Q IQN C + I+++N D+ +SFAG++F + SG++K +
Sbjct: 695 YTFIQSIQNDKCNITYTIEEVNKDRDVSFAGINFKLTSGSVKMTVSIENYQYSSNLNTLQ 754
Query: 1383 LQMKTIANQESTN----CNTKSTDIDTSGIVTTSTLNYVTIKKNNKVLVGRFINRVLSDG 1550
LQMK+ N+ TN CN +I+ + S LNY+TIKK+ KVL GRFI+R+ SDG
Sbjct: 755 LQMKSSVNEIQTNNENDCNDDQIEINNTPNQDNS-LNYITIKKDAKVLNGRFIDRIESDG 813
Query: 1551 RSTFITSNVVSTSDKESLILQVNLPHCVSECVIDPDFSLLVSPDYIDNC--STKRKWXXX 1724
STF+ + ++S S+ +S+ + +NLPHC +C++DPDFS+LVSP+++D C + ++ W
Sbjct: 814 ISTFMKTVLISKSN-DSITVGMNLPHCTKKCLLDPDFSVLVSPEFVDGCRGNDQKFWVLP 872
Query: 1725 XXXXXXXXXXXFLIGLSIIIYRKNQIAIRIKLSTIRLSKK 1844
+I L +IY+K + R K L++K
Sbjct: 873 VAITVPVVACALIIALLYVIYKKRFVEARFKRQIKLLNRK 912
Score = 27.7 bits (60), Expect(2) = 2e-34
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +2
Query: 1034 NNSMSGPIGKLSQFGSNVKNLFISXXXXEVDINDKIVNNYSLENNWKLKNVTN-SKTFFL 1210
N ++ G G + + E+D N +N Y L N W + ++N SKT +
Sbjct: 639 NTTIDGNTGNTNITNQQTNYQILITKLIEIDFNGNQINEYLLLNKWSI--ISNISKTVYT 696
Query: 1211 F 1213
F
Sbjct: 697 F 697
Score = 35.4 bits (80), Expect = 7.3
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Frame = +2
Query: 701 SNFNDVSHFNNSCSISLKVLEG-SISSFPFSKA-NNLLKSVTIQSYIDKPLNLIDLSNL- 871
S+++++S N S+++ + SF FS+ ++ LK + I SYI ++ID S++
Sbjct: 10 SSWSNISTIENITSLTIHSNDFIQFPSFEFSQIRSDNLKLIWIDSYISSVPSIIDFSSIG 69
Query: 872 -KITSLIMSNVSNLFNINNEI-PFTNFP--STIQTFNFLDGKINSIPKNI--NVEFISFR 1033
I S+ + F + PF P ++F+F G I ++ ++ NVE ++
Sbjct: 70 NSIESMSFTKCGRNFQYGGGLFPFI-LPKNKNFKSFSFSGGYIETLDFSLFNNVEILTLE 128
Query: 1034 NNSMSGP---IGKLSQFGSNVKNLFISXXXXEVDINDKIVN-NYSLENNWKLKNVTNSKT 1201
NN +SG + ++ FG +K + I I+D + + + NN L N T
Sbjct: 129 NNVISGSFPLVFNITLFG-KLKYINIMDNKITGTIDDSFCSVDLYVRNN--LMNGTIPSC 185
Query: 1202 FFLFPKNSKFKL*INFNNRSN 1264
F F F + NN +N
Sbjct: 186 FTCFLGLPSFSYKFSGNNFTN 206
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,655,826,132
Number of extensions: 51299815
Number of successful extensions: 130449
Number of sequences better than 10.0: 221
Number of HSP's gapped: 129714
Number of HSP's successfully gapped: 272
Length of query: 630
Length of database: 1,051,180,864
Length adjustment: 135
Effective length of query: 495
Effective length of database: 614,245,399
Effective search space: 304051472505
Effective search space used: 304051472505
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
3 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |