Contig-U12423-1
Contig ID Contig-U12423-1
Contig update 2002.12.18
Contig sequence
>Contig-U12423-1 (Contig-U12423-1Q) /CSM_Contig/Contig-U12423-1Q.Seq.d
AATTATTATTGCAACATATATATTTTTTCAAAAAAAATAAATATGGTAAA
AGCATATTTAAAGTTTGTTCAAGATAAAGTTTTTGGGTTAATATCAACTA
GTAATTCTATATTGGATGGTAGTGGTAAATTAGCAATTACAGGATGTGGT
GAACGTATAAGTATTTGGGATTTACGTAAACAAGTGTTAAATCAATCATT
ATATGAAGAAGATATAAAAGCAGAAGTTACAAATGTATGTTTAAGTAAGG
ATGGTGCATTATTAGCATCTGGCTATTCAGATGGGTCAATTAGAATTTGG
TCAATGTCAGATTACCAATTACAAGCAGTTTTCAATGGACATAGAGGATC
GGTTACAACAATGACATTCAATCGTTTAGGTAATATTTTAGTATCTGGAA
GTAAAGATACAGAAGTGATAGTATGGGATATTATAACGGAATCAGGTCTA
TTCCGTTTACGTGGTCATCGTGATCAAATTACCTCTGTTAAATTATTAGA
ACGTTCAAATCATTTAATTACAAGTTCAAAAGATGGATTTATAAAGATTT
GGGATACCGAAACTCAACATTGTATTCAAACAATTGTTGGACATCGTAAT
CCAATTTGGGGTATCGATGTGAACCCCGATGAAACTCGTTTATGTTCATG
TAC----------TGAATCAGATCGTCAAAGAGAAATGGAACAAACTTGG
GAAGCCACATTAGAGGATGACACTCGTATGCGTACAAAAGAAATGTTGGA
AGAGAATGCAGCAGCTGGTAAACAAACTCTCGAAACCATTATGGCTGGTG
AAGATATTTTAGATGCAATTGAACTTTGCGTTCAAGAGAAATTCAAAATT
GATGAATATGAAAAACTATTGAAAACCACTAAAAATCAAGATGAAATCCC
ACTCTATCAACCAAACATTATCATGTTGGGTCTCTCTCCATCTGAATACC
TTTGGAATAGAATCAACAGAATTAGACCAAGTGATTTAGAAGAAGCCCTT
AGAGTATTACCCTTCTCTGTAATGAGAACACTTTTCGAATATTTCAATCT
ATGGGTCGATCAATCTGGAAAGAGTGTTGAATTCATTTTCAAATGTTCTT
TCTTTTTAATTCAAACTCATCAAAATCAATTATCAGTTTCAACAGAATTC
ATACCAATTTTACAACATTTAAATACATCAATTAAAAATCGTTTACAAAA
AGAAAGATTCACATTAGGTTTTAATAGATCTGCATTATCATTTGTTAAAC
GTGAAATTGAAATTAATCAACAATATAAATTTTTTGATTCTGATTTATAT
TTAAATAAAAATAATAAAAATAATAAAGATAAAGATAGTAATAATAATAA
GAAAGATAATAAGAAAGATAATAAGAAAGATAAGAAAAATCATTAAAAAG
AAATAGAAAATAAAATAAAAATTAAAATTTATAATA

Gap gap included
Contig length 1426
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 6005327
End point 6006754
Strand (PLUS/MINUS) PLUS
Number of clones 4
Number of EST 8
Link to clone list U12423
List of clone(s)

est1=VHC855F,1,581
est2=VHQ350F,1,626
est3=VHH704F,5,653
est4=VHO810F,13,623
est5=VHQ350Z,654,1367
est6=VHC855Z,677,1423
est7=VHO810Z,677,1427
est8=VHH704Z,694,1423
Translated Amino Acid sequence
NYYCNIYIFSKKINMVKAYLKFVQDKVFGLISTSNSILDGSGKLAITGCGERISIWDLRK
QVLNQSLYEEDIKAEVTNVCLSKDGALLASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTT
MTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNHLITSSKDGF
IKIWDTETQHCIQTIVGHRNPIWGIDVNPDETRLCSC---

---ESDRQREMEQTWEATLEDDTRMRTKEMLEENAAAGKQTLETIMAGEDILDAIELCVQ
EKFKIDEYEKLLKTTKNQDEIPLYQPNIIMLGLSPSEYLWNRINRIRPSDLEEALRVLPF
SVMRTLFEYFNLWVDQSGKSVEFIFKCSFFLIQTHQNQLSVSTEFIPILQHLNTSIKNRL
QKERFTLGFNRSALSFVKREIEINQQYKFFDSDLYLNKNNKNNKDKDSNNNKKDNKKDNK
KDKKNH*keienkikikiyn


Translated Amino Acid sequence (All Frames)
Frame A:
NYYCNIYIFSKKINMVKAYLKFVQDKVFGLISTSNSILDGSGKLAITGCGERISIWDLRK
QVLNQSLYEEDIKAEVTNVCLSKDGALLASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTT
MTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNHLITSSKDGF
IKIWDTETQHCIQTIVGHRNPIWGIDVNPDETRLCSC---

---*irsskrngtnlgshirg*hsyaykrnvgrecssw*tnsrnhygw*ryfrcn*tlrs
reiqn**i*ktienh*ksr*nptlstkhyhvgslsi*iple*nqqn*tk*frrsp*sitl
lcnentfrifqsmgrsiwkec*ihfqmfflfnsnssksiisfnrihtnfttfkyin*ksf
tkrkihirf**iciiic*t*n*n*sti*if*f*fifk*k**k**r*r*****er**er**
er*ekslkrnrk*nkn*nl*

Frame B:
iiiatyiffqkk*iw*khi*slfkikflg*yqlvilywmvvvn*qlqdvvnv*vfgiyvn
kc*inhymkki*kqklqmyv*vrmvhy*hlaiqmgqlefgqcqitnykqfsmdiedrlqq
*hsiv*vif*ylevkiqk**ygil*rnqvysvyvviviklpllny*nvqii*lqvqkmdl
*rfgipklnivfkqlldiviqfgvsm*tpmklvyvhv---

---ESDRQREMEQTWEATLEDDTRMRTKEMLEENAAAGKQTLETIMAGEDILDAIELCVQ
EKFKIDEYEKLLKTTKNQDEIPLYQPNIIMLGLSPSEYLWNRINRIRPSDLEEALRVLPF
SVMRTLFEYFNLWVDQSGKSVEFIFKCSFFLIQTHQNQLSVSTEFIPILQHLNTSIKNRL
QKERFTLGFNRSALSFVKREIEINQQYKFFDSDLYLNKNNKNNKDKDSNNNKKDNKKDNK
KDKKNH*keienkikikiyn

Frame C:
lllqhiyffkknkygksifkvcsr*sfwvnin**fyigw*w*isnyrmw*tykylgft*t
svksiii*rryksrsykcmfk*gwciisiwlfrwvn*nlvnvrlpitssfqwt*rigynn
diqsfr*yfsiwk*ryrsdsmgyyngirsipftwss*snylc*iirtfksfnykfkrwiy
kdlgyrnstlysnncwts*snlgyrcepr*nsfmfmy---

---nqivkekwnklgkph*rmtlvcvqkkcwkrmqqlvnklskplwlvkif*mqlnfafk
rnsklmnmkny*kplkikmkshsinqtlscwvslhlntfgiesteldqvi*kkpleyyps
l**ehfsnisiygsinlervlnsfsnvlsf*fklikinyqfqqnsyqfyni*ihqlkivy
kkkdsh*vlidlhyhllnvklklinninfliliyi*ikiikiikikiviiirkiirkiir
kirkiikkk*kik*klkfii

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U12423-1 (Contig-U12423-1Q)
/CSM_Contig/Contig-U12423-1Q.Seq.d
(1436 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U12423-1 (Contig-U12423-1Q) /CSM_Contig/Conti... 2472 0.0
Contig-U09569-1 (Contig-U09569-1Q) /CSM_Contig/Conti... 38 0.026
Contig-U06794-1 (Contig-U06794-1Q) /CSM_Contig/Conti... 38 0.026
Contig-U13067-1 (Contig-U13067-1Q) /CSM_Contig/Conti... 36 0.10
Contig-U12373-1 (Contig-U12373-1Q) /CSM_Contig/Conti... 36 0.10
Contig-U08939-1 (Contig-U08939-1Q) /CSM_Contig/Conti... 36 0.10
Contig-U01651-1 (Contig-U01651-1Q) /CSM_Contig/Conti... 36 0.10
Contig-U13872-1 (Contig-U13872-1Q) /CSM_Contig/Conti... 34 0.40
Contig-U12765-1 (Contig-U12765-1Q) /CSM_Contig/Conti... 34 0.40
Contig-U11302-1 (Contig-U11302-1Q) /CSM_Contig/Conti... 34 0.40

>Contig-U12423-1 (Contig-U12423-1Q) /CSM_Contig/Contig-U12423-1Q.Seq.d
Length = 1436

Score = 2472 bits (1247), Expect = 0.0
Identities = 1293/1301 (99%)
Strand = Plus / Plus


Query: 1 aattattattgcaacatatatattttttcnnnnnnnntaaatatggtaaaagcatattta 60
||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 aattattattgcaacatatatattttttcaaaaaaaataaatatggtaaaagcatattta 60


Query: 61 aagtttgttcaagataaagtttttgggttaatatcaactagtaattctatattggatggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagtttgttcaagataaagtttttgggttaatatcaactagtaattctatattggatggt 120


Query: 121 agtggtaaattagcaattacaggatgtggtgaacgtataagtatttgggatttacgtaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtggtaaattagcaattacaggatgtggtgaacgtataagtatttgggatttacgtaaa 180


Query: 181 caagtgttaaatcaatcattatatgaagaagatataaaagcagaagttacaaatgtatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caagtgttaaatcaatcattatatgaagaagatataaaagcagaagttacaaatgtatgt 240


Query: 241 ttaagtaaggatggtgcattattagcatctggctattcagatgggtcaattagaatttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttaagtaaggatggtgcattattagcatctggctattcagatgggtcaattagaatttgg 300


Query: 301 tcaatgtcagattaccaattacaagcagttttcaatggacatagaggatcggttacaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcaatgtcagattaccaattacaagcagttttcaatggacatagaggatcggttacaaca 360


Query: 361 atgacattcaatcgtttaggtaatattttagtatctggaagtaaagatacagaagtgata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atgacattcaatcgtttaggtaatattttagtatctggaagtaaagatacagaagtgata 420


Query: 421 gtatgggatattataacggaatcaggtctattccgtttacgtggtcatcgtgatcaaatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtatgggatattataacggaatcaggtctattccgtttacgtggtcatcgtgatcaaatt 480


Query: 481 acctctgttaaattattagaacgttcaaatcatttaattacaagttcaaaagatggattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acctctgttaaattattagaacgttcaaatcatttaattacaagttcaaaagatggattt 540


Query: 541 ataaagatttgggataccgaaactcaacattgtattcaaacaattgttggacatcgtaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ataaagatttgggataccgaaactcaacattgtattcaaacaattgttggacatcgtaat 600


Query: 601 ccaatttggggtatcgatgtgaaccccgatgaaactcgtttatgttcatgtacnnnnnnn 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccaatttggggtatcgatgtgaaccccgatgaaactcgtttatgttcatgtacnnnnnnn 660


Query: 661 nnntgaatcagatcgtcaaagagaaatggaacaaacttgggaagccacattagaggatga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 nnntgaatcagatcgtcaaagagaaatggaacaaacttgggaagccacattagaggatga 720


Query: 721 cactcgtatgcgtacaaaagaaatgttggaagagaatgcagcagctggtaaacaaactct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cactcgtatgcgtacaaaagaaatgttggaagagaatgcagcagctggtaaacaaactct 780


Query: 781 cgaaaccattatggctggtgaagatattttagatgcaattgaactttgcgttcaagagaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cgaaaccattatggctggtgaagatattttagatgcaattgaactttgcgttcaagagaa 840


Query: 841 attcaaaattgatgaatatgaaaaactattgaaaaccactaaaaatcaagatgaaatccc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 attcaaaattgatgaatatgaaaaactattgaaaaccactaaaaatcaagatgaaatccc 900


Query: 901 actctatcaaccaaacattatcatgttgggtctctctccatctgaatacctttggaatag 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 actctatcaaccaaacattatcatgttgggtctctctccatctgaatacctttggaatag 960


Query: 961 aatcaacagaattagaccaagtgatttagaagaagcccttagagtattacccttctctgt 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 aatcaacagaattagaccaagtgatttagaagaagcccttagagtattacccttctctgt 1020


Query: 1021 aatgagaacacttttcgaatatttcaatctatgggtcgatcaatctggaaagagtgttga 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 aatgagaacacttttcgaatatttcaatctatgggtcgatcaatctggaaagagtgttga 1080


Query: 1081 attcattttcaaatgttctttctttttaattcaaactcatcaaaatcaattatcagtttc 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 attcattttcaaatgttctttctttttaattcaaactcatcaaaatcaattatcagtttc 1140


Query: 1141 aacagaattcataccaattttacaacatttaaatacatcaattaaaaatcgtttacaaaa 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aacagaattcataccaattttacaacatttaaatacatcaattaaaaatcgtttacaaaa 1200


Query: 1201 agaaagattcacattaggttttaatagatctgcattatcatttgttaaacgtgaaattga 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 agaaagattcacattaggttttaatagatctgcattatcatttgttaaacgtgaaattga 1260


Query: 1261 aattaatcaacaatataaattttttgattctgatttatatt 1301
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 aattaatcaacaatataaattttttgattctgatttatatt 1301


>Contig-U09569-1 (Contig-U09569-1Q) /CSM_Contig/Contig-U09569-1Q.Seq.d
Length = 1434

Score = 38.2 bits (19), Expect = 0.026
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 109 atattggatggtagtggta 127
|||||||||||||||||||
Sbjct: 139 atattggatggtagtggta 157


>Contig-U06794-1 (Contig-U06794-1Q) /CSM_Contig/Contig-U06794-1Q.Seq.d
Length = 622

Score = 38.2 bits (19), Expect = 0.026
Identities = 25/27 (92%)
Strand = Plus / Plus


Query: 839 aaattcaaaattgatgaatatgaaaaa 865
|||||||||||||||||| |||||||
Sbjct: 367 aaattcaaaattgatgaaattgaaaaa 393


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 17,853
Number of Sequences: 6905
Number of extensions: 17853
Number of successful extensions: 1942
Number of sequences better than 10.0: 187
length of query: 1436
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1420
effective length of database: 5,564,391
effective search space: 7901435220
effective search space used: 7901435220
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.30
Homology vs DNA
Query= Contig-U12423-1 (Contig-U12423-1Q) /CSM_Contig/Contig-U12423-1Q.Seq.d
(1436 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ422492) Dictyostelium discoideum cDNA clone:ddv46h01, 5' ... 1221 0.0 2
(BJ446686) Dictyostelium discoideum cDNA clone:ddv63d13, 3' ... 1181 0.0 1
(BJ427764) Dictyostelium discoideum cDNA clone:ddv63d13, 5' ... 1168 0.0 2
(BJ426727) Dictyostelium discoideum cDNA clone:ddv60d04, 5' ... 1162 0.0 2
(BJ445608) Dictyostelium discoideum cDNA clone:ddv60d04, 3' ... 1136 0.0 1
(BJ438203) Dictyostelium discoideum cDNA clone:ddv36n14, 3' ... 1136 0.0 1
(BJ441232) Dictyostelium discoideum cDNA clone:ddv46h01, 3' ... 1102 0.0 1
(BJ419625) Dictyostelium discoideum cDNA clone:ddv36n14, 5' ... 1078 0.0 2
(AG920782) Drosophila auraria DNA, clone: DAB1-031C03.R.fa, ... 38 0.048 2
(CR380838) Pan troglodytes chromosome X BAC RP43-021E02. 50 0.24 1
(AC206052) Pan troglodytes chromosome X clone CH251-307L2, W... 50 0.24 1
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi... 44 0.27 12
(BV546684) ssd22f01.b1 Clint Pan troglodytes verus STS genom... 48 0.93 1
(BV543421) ssc88f01.b1 Clint Pan troglodytes verus STS genom... 48 0.93 1
(BV502483) qjl18c09.b1 Clint Pan troglodytes verus STS genom... 48 0.93 1
(CQ869603) Sequence 24 from Patent WO2004074320. 48 0.93 1
(D87675) Homo sapiens APP gene for amyloid precursor protein... 48 0.93 1
(AY919674) Homo sapiens amyloid beta (A4) precursor protein ... 48 0.93 1
(AP001695) Homo sapiens genomic DNA, chromosome 21q, section... 48 0.93 1
(AP001442) Homo sapiens genomic DNA, chromosome 21q21.1-q21.... 48 0.93 1
(AP000141) Homo sapiens genomic DNA, chromosome 21q21.2, LL5... 48 0.93 1
(AP000089) Homo sapiens genomic DNA of 21q22.1, APP related,... 48 0.93 1
(AC069301) Homo sapiens chromosome 2 clone RP11-63E1 map 2, ... 48 0.93 1
(B80728) CIT-HSP-2050O10.TR CIT-HSP Homo sapiens genomic clo... 48 0.93 1
(FC743007) CBBI13417.fwd CBBI Lottia gigantea 26h,37h,61h La... 48 0.93 1
(FC715651) CBBG10266.fwd CBBG Lottia gigantea 12,15,18h embr... 48 0.93 1
(FC698130) CAXX6527.fwd CAXX Lottia gigantea from male gonad... 48 0.93 1
(FC695429) CAXX4966.fwd CAXX Lottia gigantea from male gonad... 48 0.93 1
(FC689405) CAXX20641.fwd CAXX Lottia gigantea from male gona... 48 0.93 1
(FC688652) CAXX20191.fwd CAXX Lottia gigantea from male gona... 48 0.93 1
(FC595673) CAXP9370.fwd CAXP Lottia gigantea from head, foot... 48 0.93 1
(AC198837) Sorex araneus clone SA_Ba-431L7, WORKING DRAFT SE... 38 3.1 3
(AL928716) Zebrafish DNA sequence from clone DKEY-23K6 in li... 46 3.7 1
(AC158351) Mus musculus chromosome 8, clone RP24-274N3, comp... 46 3.7 1
(AC116747) Mus musculus chromosome 8, clone RP23-80O20, comp... 46 3.7 1
(AC127239) Mus musculus chromosome 8 clone RP24-381A23, WORK... 46 3.7 1
(AC119084) Rattus norvegicus clone CH230-112G1, *** SEQUENCI... 46 3.7 1
(CV559001) UI-M-HZ0-cth-d-14-0-UI.r1 NIH_BMAP_HZ0 Mus muscul... 46 3.7 1
(FG564117) BN18DYSC_UP_132_H06_3APR2008_034 BN18DYSC Brassic... 46 3.7 1
(EJ456266) 1093017489051 Global-Ocean-Sampling_GS-28-01-01-1... 40 3.9 3
(CP000361) Arcobacter butzleri RM4018, complete genome. 38 4.1 20
(CO869104) Ep_CT_05H06_SKPL Eurydice pulchra CT library Eury... 44 4.1 2
(BV667382) S217P61229FF2.T0 Noemie Pan troglodytes troglodyt... 40 4.2 2
(CP000703) Staphylococcus aureus subsp. aureus JH9, complete... 34 5.6 2
(CP000736) Staphylococcus aureus subsp. aureus JH1, complete... 34 5.6 2
(BX571856) Staphylococcus aureus subsp. aureus strain MRSA25... 34 5.6 2
(AP009324) Staphylococcus aureus subsp. aureus Mu3 DNA, comp... 34 5.6 2
(AP009351) Staphylococcus aureus subsp. aureus str. Newman D... 34 5.6 2
(BA000017) Staphylococcus aureus subsp. aureus Mu50 DNA, com... 34 5.6 2
(CP000730) Staphylococcus aureus subsp. aureus USA300_TCH151... 34 5.6 2
(CP000255) Staphylococcus aureus subsp. aureus USA300_FPR375... 34 5.6 2
(CP000253) Staphylococcus aureus subsp. aureus NCTC 8325, co... 34 5.6 2
(BA000033) Staphylococcus aureus subsp. aureus MW2 DNA, comp... 34 5.6 2
(BA000018) Staphylococcus aureus subsp. aureus N315 DNA, com... 34 5.6 2
(CP000046) Staphylococcus aureus subsp. aureus COL, complete... 34 5.6 2
(BX571857) Staphylococcus aureus strain MSSA476, complete ge... 34 5.6 2
(AJ938182) Staphylococcus aureus RF122 complete genome. 34 5.6 2
(AC008051) Sequence of BAC F19C14 from Arabidopsis thaliana ... 40 5.7 5
(CR538722) M.truncatula DNA sequence from clone MTH2-11A20 o... 36 5.9 7
(AC144475) Medicago truncatula clone mth2-11a20, WORKING DRA... 36 5.9 7
(AC174011) Strongylocentrotus purpuratus clone R3-3051K20, W... 44 7.3 7
(AR535695) Sequence 257 from patent US 6737248. 34 8.5 2
(AR354139) Sequence 257 from patent US 6593114. 34 8.5 2
(DD121412) STAPHYLOCOCCUS AUREUS PROTEINS AND NUCLEIC ACIDS. 34 9.3 2
(CS711597) Sequence 4137 from Patent EP1829892. 34 9.3 2
(AX621174) Sequence 4137 from Patent WO02094868. 34 9.3 2

>(BJ422492) Dictyostelium discoideum cDNA clone:ddv46h01, 5' end,
single read.
Length = 649

Score = 1221 bits (616), Expect(2) = 0.0
Identities = 616/616 (100%)
Strand = Plus / Plus


Query: 38 taaatatggtaaaagcatatttaaagtttgttcaagataaagtttttgggttaatatcaa 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34 taaatatggtaaaagcatatttaaagtttgttcaagataaagtttttgggttaatatcaa 93


Query: 98 ctagtaattctatattggatggtagtggtaaattagcaattacaggatgtggtgaacgta 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 ctagtaattctatattggatggtagtggtaaattagcaattacaggatgtggtgaacgta 153


Query: 158 taagtatttgggatttacgtaaacaagtgttaaatcaatcattatatgaagaagatataa 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 taagtatttgggatttacgtaaacaagtgttaaatcaatcattatatgaagaagatataa 213


Query: 218 aagcagaagttacaaatgtatgtttaagtaaggatggtgcattattagcatctggctatt 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 aagcagaagttacaaatgtatgtttaagtaaggatggtgcattattagcatctggctatt 273


Query: 278 cagatgggtcaattagaatttggtcaatgtcagattaccaattacaagcagttttcaatg 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 cagatgggtcaattagaatttggtcaatgtcagattaccaattacaagcagttttcaatg 333


Query: 338 gacatagaggatcggttacaacaatgacattcaatcgtttaggtaatattttagtatctg 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gacatagaggatcggttacaacaatgacattcaatcgtttaggtaatattttagtatctg 393


Query: 398 gaagtaaagatacagaagtgatagtatgggatattataacggaatcaggtctattccgtt 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gaagtaaagatacagaagtgatagtatgggatattataacggaatcaggtctattccgtt 453


Query: 458 tacgtggtcatcgtgatcaaattacctctgttaaattattagaacgttcaaatcatttaa 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tacgtggtcatcgtgatcaaattacctctgttaaattattagaacgttcaaatcatttaa 513


Query: 518 ttacaagttcaaaagatggatttataaagatttgggataccgaaactcaacattgtattc 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ttacaagttcaaaagatggatttataaagatttgggataccgaaactcaacattgtattc 573


Query: 578 aaacaattgttggacatcgtaatccaatttggggtatcgatgtgaaccccgatgaaactc 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 aaacaattgttggacatcgtaatccaatttggggtatcgatgtgaaccccgatgaaactc 633


Query: 638 gtttatgttcatgtac 653
||||||||||||||||
Sbjct: 634 gtttatgttcatgtac 649

Score = 50.1 bits (25), Expect(2) = 0.0
Identities = 25/25 (100%)
Strand = Plus / Plus


Query: 5 attattgcaacatatatattttttc 29
|||||||||||||||||||||||||
Sbjct: 1 attattgcaacatatatattttttc 25

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,502,252,880
Number of extensions: 88528661
Number of successful extensions: 7248443
Number of sequences better than 10.0: 66
Length of query: 1436
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1412
Effective length of database: 97,308,875,965
Effective search space: 137400132862580
Effective search space used: 137400132862580
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7. 3
Homology vs Protein
Query= Contig-U12423-1 (Contig-U12423-1Q) /CSM_Contig/Contig-U12423-1Q.Seq.d
(1436 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

BC072906_1(BC072906|pid:none) Xenopus laevis hypothetical protei... 189 2e-46
BC094103_1(BC094103|pid:none) Xenopus laevis hypothetical protei... 189 2e-46
AM472166_2(AM472166|pid:none) Vitis vinifera contig VV78X131919.... 187 1e-45
BC063906_1(BC063906|pid:none) Xenopus tropicalis WD repeat domai... 185 4e-45
BC057490_1(BC057490|pid:none) Danio rerio WD repeat domain 3, mR... 181 6e-44
(Q8BHB4) RecName: Full=WD repeat-containing protein 3; &AK05073... 178 5e-43
BT045440_1(BT045440|pid:none) Salmo salar clone ssal-rgf-521-224... 176 1e-42
CR382124_680(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 143 9e-39
AB209201_1(AB209201|pid:none) Homo sapiens mRNA for WD repeat-co... 117 2e-37
CR382129_35(CR382129|pid:none) Yarrowia lipolytica strain CLIB12... 155 3e-37
AM920430_81(AM920430|pid:none) Penicillium chrysogenum Wisconsin... 158 4e-37
(P87177) RecName: Full=Uncharacterized WD repeat-containing prot... 152 4e-36
CU633899_348(CU633899|pid:none) Podospora anserina genomic DNA c... 154 6e-36
CR382138_176(CR382138|pid:none) Debaryomyces hansenii strain CBS... 138 1e-35
FM992688_764(FM992688|pid:none) Candida dubliniensis CD36 chromo... 131 1e-34
AL033501_8(AL033501|pid:none) C.albicans cosmid Ca41C10. &T1823... 135 3e-34
CP000600_77(CP000600|pid:none) Ostreococcus lucimarinus CCE9901 ... 148 4e-34
CU928171_512(CU928171|pid:none) Kluyveromyces thermotolerans str... 147 1e-33
CR380959_185(CR380959|pid:none) Candida glabrata strain CBS138 c... 145 5e-33
X89514_24(X89514|pid:none) S.cerevisiae DNA from chromosome XII ... 144 6e-33
(Q12220) RecName: Full=U3 small nucleolar RNA-associated protein... 144 6e-33
CP000496_903(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 139 7e-32
AE016820_175(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 133 3e-31
U53881_1(U53881|pid:none) Saccharomyces cerevisiae chromosome XI... 86 4e-31
AM910994_582(AM910994|pid:none) Plasmodium knowlesi strain H chr... 129 3e-28
AE014297_2579(AE014297|pid:none) Drosophila melanogaster chromos... 103 9e-28
AE014187_454(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 126 2e-27
AE017352_159(AE017352|pid:none) Cryptococcus neoformans var. neo... 122 3e-26
U23139_7(U23139|pid:none) Caenorhabditis elegans cosmid F13H8, c... 118 6e-25
AY080810_1(AY080810|pid:none) Arabidopsis thaliana putative WD-r... 112 4e-23
AP007163_34(AP007163|pid:none) Aspergillus oryzae RIB40 genomic ... 107 1e-21
CP001037_1914(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 105 5e-21
CP001037_4818(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 104 7e-21
AY810319_1(AY810319|pid:none) Schistosoma japonicum SJCHGC06159 ... 101 6e-20
CP000117_2804(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 101 6e-20
CP000117_5003(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 101 8e-20
AY608603_1(AY608603|pid:none) Exophiala dermatitidis Tup1p gene,... 100 1e-19
AF323582_1(AF323582|pid:none) Podospora anserina beta transducin... 100 1e-19
AF323584_1(AF323584|pid:none) Podospora anserina beta transducin... 100 1e-19
AF323583_1(AF323583|pid:none) Podospora anserina beta transducin... 100 1e-19
AY224574_1(AY224574|pid:none) Oryza sativa (japonica cultivar-gr... 100 1e-19
BA000045_2888(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 100 1e-19
CP001037_5630(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 100 2e-19
BC085436_1(BC085436|pid:none) Danio rerio zgc:101778, mRNA (cDNA... 100 2e-19
CP000117_173(CP000117|pid:none) Anabaena variabilis ATCC 29413, ... 100 2e-19
CP000117_2178(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 99 3e-19
CU074270_1(CU074270|pid:none) Podospora anserina genomic DNA, NW... 99 3e-19
AI2493(AI2493) WD-repeat protein [imported] - Nostoc sp. (strain... 99 5e-19
CP000807_36(CP000807|pid:none) Cyanothece sp. ATCC 51142 linear ... 98 7e-19
CP001291_1144(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 98 9e-19
(Q00808) RecName: Full=Vegetative incompatibility protein HET-E-... 97 1e-18
CP001291_1208(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 97 1e-18
CP000686_859(CP000686|pid:none) Roseiflexus sp. RS-1, complete g... 97 2e-18
CP001037_1143(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 97 2e-18
CU074274_1(CU074274|pid:none) Podospora anserina genomic DNA, NW... 97 2e-18
CP000828_167(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 97 2e-18
CP001037_247(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 97 2e-18
AM746676_3634(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 96 2e-18
CP000117_2488(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 96 3e-18
CP001291_3285(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 96 3e-18
CU633453_76(CU633453|pid:none) Podospora anserina genomic DNA ch... 96 3e-18
CP000828_5917(CP000828|pid:none) Acaryochloris marina MBIC11017,... 95 6e-18
CP001037_1323(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 95 7e-18
CP000828_5861(CP000828|pid:none) Acaryochloris marina MBIC11017,... 94 9e-18
CP000117_1553(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 94 9e-18
CP000844_164(CP000844|pid:none) Acaryochloris marina MBIC11017 p... 94 9e-18
AE2490(AE2490) WD-repeat protein [imported] - Nostoc sp. (strain... 94 2e-17
AJ252128_1(AJ252128|pid:none) Yarrowia lipolytica tup1 gene for ... 94 2e-17
BA000045_1965(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 94 2e-17
(Q8BG40) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 93 2e-17
(Q9BVA0) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 93 2e-17
AK010364_1(AK010364|pid:none) Mus musculus ES cells cDNA, RIKEN ... 93 2e-17
(Q8YTC2) RecName: Full=Uncharacterized WD repeat-containing prot... 93 2e-17
BC149991_1(BC149991|pid:none) Bos taurus katanin p80 (WD repeat ... 93 2e-17
CP000119_130(CP000119|pid:none) Anabaena variabilis ATCC 29413 p... 93 2e-17
AK031630_1(AK031630|pid:none) Mus musculus 13 days embryo male t... 93 2e-17
AY891382_1(AY891382|pid:none) Synthetic construct Homo sapiens c... 93 2e-17
FN314118_1(FN314118|pid:none) Schistosoma japonicum isolate Anhu... 93 3e-17
(Q8I0F4) RecName: Full=Lissencephaly-1 homolog; AltName: Full=Dd... 93 3e-17
BC135427_1(BC135427|pid:none) Xenopus tropicalis transducin (bet... 92 5e-17
CP000117_2838(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 92 5e-17
AJ719451_1(AJ719451|pid:none) Gallus gallus mRNA for hypothetica... 92 5e-17
AY812578_1(AY812578|pid:none) Schistosoma japonicum SJCHGC09556 ... 92 6e-17
CP000828_20(CP000828|pid:none) Acaryochloris marina MBIC11017, c... 92 6e-17
CP000828_160(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 92 6e-17
(Q12788) RecName: Full=Transducin beta-like protein 3; AltName: ... 91 8e-17
BC007620_1(BC007620|pid:none) Homo sapiens transducin (beta)-lik... 91 8e-17
AP003224_20(AP003224|pid:none) Oryza sativa Japonica Group genom... 91 8e-17
(P38123) RecName: Full=COMPASS component SWD3; AltName: Full=Com... 91 8e-17
(Q9PTR5) RecName: Full=Platelet-activating factor acetylhydrolas... 91 8e-17
CP000806_3916(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 91 1e-16
S36113(S36113)LIS-1 protein - human 91 1e-16
BA000045_4356(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 91 1e-16
AK147793_1(AK147793|pid:none) Mus musculus melanocyte cDNA, RIKE... 91 1e-16
(P43034) RecName: Full=Platelet-activating factor acetylhydrolas... 91 1e-16
AP007169_1(AP007169|pid:none) Aspergillus oryzae RIB40 genomic D... 91 1e-16
AK147309_1(AK147309|pid:none) Mus musculus adult male brain UNDE... 91 1e-16
(P43033) RecName: Full=Platelet-activating factor acetylhydrolas... 91 1e-16
AK167824_1(AK167824|pid:none) Mus musculus CRL-1722 L5178Y-R cDN... 91 1e-16
DQ647383_1(DQ647383|pid:none) Chlamydomonas reinhardtii lissence... 91 1e-16
(Q803D2) RecName: Full=Lissencephaly-1 homolog B; &BC044530_1(B... 91 1e-16
AY082798_1(AY082798|pid:none) Penicillium marneffei TupA protein... 91 1e-16
BT052263_1(BT052263|pid:none) Medicago truncatula clone MTYF9_FA... 91 1e-16
AM920427_459(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 91 1e-16
(Q90ZL4) RecName: Full=Lissencephaly-1 homolog B; &AY032881_1(A... 91 1e-16
AH2195(AH2195) hypothetical protein alr3119 [imported] - Nostoc ... 91 1e-16
BA000045_4351(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 91 1e-16
AP007175_262(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 90 2e-16
CP000828_5196(CP000828|pid:none) Acaryochloris marina MBIC11017,... 90 2e-16
AE1810(AE1810) WD-40 repeat protein [imported] - Nostoc sp. (str... 90 2e-16
BT045765_1(BT045765|pid:none) Salmo salar clone ssal-rgf-530-312... 90 2e-16
AB209173_1(AB209173|pid:none) Homo sapiens mRNA for transducin b... 90 2e-16
AC1842(AC1842) WD-40 repeat protein [imported] - Nostoc sp. (str... 90 2e-16
BC077273_1(BC077273|pid:none) Xenopus laevis cDNA clone IMAGE:40... 90 2e-16
(Q9GL51) RecName: Full=Platelet-activating factor acetylhydrolas... 90 2e-16
AM270328_15(AM270328|pid:none) Aspergillus niger contig An15c001... 90 2e-16
(Q5REG7) RecName: Full=Platelet-activating factor acetylhydrolas... 90 2e-16
(Q4V7Y7) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 90 2e-16
AP009552_6258(AP009552|pid:none) Microcystis aeruginosa NIES-843... 89 3e-16
CP000828_5338(CP000828|pid:none) Acaryochloris marina MBIC11017,... 89 3e-16
CP000117_4826(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 89 4e-16
AF052432_1(AF052432|pid:none) Homo sapiens katanin p80 subunit m... 89 4e-16
CP001099_1375(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,... 89 4e-16
CP000119_93(CP000119|pid:none) Anabaena variabilis ATCC 29413 pl... 89 4e-16
AP007164_19(AP007164|pid:none) Aspergillus oryzae RIB40 genomic ... 89 4e-16
(Q6NVM2) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 89 4e-16
DQ151642_1(DQ151642|pid:none) Chlamydomonas reinhardtii WD repea... 89 5e-16
EF083131_1(EF083131|pid:none) Picea sitchensis clone WS02722_J02... 89 5e-16
AK028806_1(AK028806|pid:none) Mus musculus 10 days neonate skin ... 89 5e-16
AK149940_1(AK149940|pid:none) Mus musculus bone marrow macrophag... 89 5e-16
AK165125_1(AK165125|pid:none) Mus musculus 2 days pregnant adult... 89 5e-16
L25109_1(L25109|pid:none) Mus musculus LIS mRNA, partial cds. 89 5e-16
CP000117_3846(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 89 5e-16
(Q8C4J7) RecName: Full=Transducin beta-like protein 3; &AK08196... 89 5e-16
(Q5M786) RecName: Full=WD repeat-containing protein 5; &BC08100... 88 7e-16
(Q6P5M2) RecName: Full=WD repeat-containing protein 61; &BC0628... 88 7e-16
AJ011376_1(AJ011376|pid:none) Homo sapiens mRNA for hypothetical... 88 7e-16
BC077844_1(BC077844|pid:none) Xenopus laevis WD repeat domain 5,... 88 7e-16
(Q2KIG2) RecName: Full=WD repeat-containing protein 5; &BC11265... 88 7e-16
BC158602_1(BC158602|pid:none) Rattus norvegicus sperm associated... 88 7e-16
(P93107) RecName: Full=Flagellar WD repeat-containing protein Pf... 88 7e-16
BC052124_1(BC052124|pid:none) Danio rerio WD repeat domain 5, mR... 88 7e-16
CP001037_1432(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 88 7e-16
FN392320_453(FN392320|pid:none) Pichia pastoris GS115 chromosome... 88 9e-16
AK144091_1(AK144091|pid:none) Mus musculus RCB-0559 K-1 . F1 cDN... 88 9e-16
AB264261_1(AB264261|pid:none) Thujopsis dolabrata CC2196 gene fo... 88 9e-16
L13387_1(L13387|pid:none) Homo sapiens (clone 6-1) Miller-Dieker... 88 9e-16
AB264266_1(AB264266|pid:none) Chamaecyparis obtusa CC2196 gene f... 88 9e-16
BT045543_1(BT045543|pid:none) Salmo salar clone ssal-rgf-524-224... 87 1e-15
U57061_1(U57061|pid:none) Neurospora crassa rco-1 gene, complete... 87 1e-15
AC159435_6(AC159435|pid:none) Trypanosoma brucei chromosome 8 cl... 87 1e-15
AP009552_3821(AP009552|pid:none) Microcystis aeruginosa NIES-843... 87 1e-15
AP008216_940(AP008216|pid:none) Oryza sativa (japonica cultivar-... 87 1e-15
AB264260_1(AB264260|pid:none) Cryptomeria japonica CC2196 gene f... 87 1e-15
AF323585_1(AF323585|pid:none) Podospora anserina beta transducin... 87 1e-15
AB264259_1(AB264259|pid:none) Cryptomeria japonica CC2196 gene f... 87 1e-15
BC019504_1(BC019504|pid:none) Mus musculus transducin (beta)-lik... 87 2e-15
BC004624_1(BC004624|pid:none) Mus musculus transducin (beta)-lik... 87 2e-15
CP001344_1900(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 87 2e-15
CP000806_2172(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 87 2e-15
CP000839_340(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 87 2e-15
FN357843_1(FN357843|pid:none) Schistosoma mansoni genome sequenc... 87 2e-15
AP009552_1527(AP009552|pid:none) Microcystis aeruginosa NIES-843... 87 2e-15
(Q2KJJ5) RecName: Full=Transducin beta-like protein 3; &BC10531... 87 2e-15
AM778942_51(AM778942|pid:none) Microcystis aeruginosa PCC 7806 g... 87 2e-15
CP001344_3209(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 87 2e-15
CP000828_3726(CP000828|pid:none) Acaryochloris marina MBIC11017,... 87 2e-15
CP000842_108(CP000842|pid:none) Acaryochloris marina MBIC11017 p... 87 2e-15
AM746676_8405(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 86 3e-15
FN392322_77(FN392322|pid:none) Pichia pastoris GS115 chromosome ... 86 3e-15
CP000148_1200(CP000148|pid:none) Geobacter metallireducens GS-15... 86 3e-15
AP007175_233(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 86 3e-15
AY457171_1(AY457171|pid:none) Leishmania amazonensis antigenic W... 86 3e-15
(Q5U2W5) RecName: Full=Transducin beta-like protein 3; &BC08583... 86 3e-15
(Q4V7A0) RecName: Full=WD repeat-containing protein 61; &BC0980... 86 3e-15
(Q9ERF3) RecName: Full=WD repeat-containing protein 61; AltName:... 86 3e-15
AB264263_1(AB264263|pid:none) Chamaecyparis pisifera CC2196 gene... 86 3e-15
(Q09715) RecName: Full=Transcriptional repressor tup11; &CU3296... 86 3e-15
AK153862_1(AK153862|pid:none) Mus musculus 2 days neonate thymus... 86 4e-15
(Q6GMD2) RecName: Full=WD repeat-containing protein 61; &BC0741... 86 4e-15
AC007259_17(AC007259|pid:none) Arabidopsis thaliana chromosome I... 86 4e-15
(Q5ZIU8) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 86 4e-15
EF215228_1(EF215228|pid:none) Callithrix jacchus clone E23-52.1_... 86 4e-15
CP000593_114(CP000593|pid:none) Ostreococcus lucimarinus CCE9901... 86 4e-15
CP000117_2617(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 86 4e-15
DQ410670_1(DQ410670|pid:none) Gallus gallus brain p80 katanin mR... 86 4e-15
AF1890(AF1890) WD-repeat protein [imported] - Nostoc sp. (strain... 85 6e-15
AE014297_1106(AE014297|pid:none) Drosophila melanogaster chromos... 85 6e-15
DQ213259_1(DQ213259|pid:none) Taeniopygia guttata clone 0061P001... 85 7e-15
AF310672_1(AF310672|pid:none) Homo sapiens PF20 variant 1a (PF20... 85 7e-15
(P49695) RecName: Full=Probable serine/threonine-protein kinase ... 85 7e-15
(Q8N0X2) RecName: Full=Sperm-associated antigen 16 protein; AltN... 85 7e-15
CR749477_1(CR749477|pid:none) Homo sapiens mRNA; cDNA DKFZp781G1... 85 7e-15
AM778957_201(AM778957|pid:none) Microcystis aeruginosa PCC 7806 ... 85 7e-15
(Q5ZJH5) RecName: Full=WD repeat-containing protein 61; &AJ7204... 85 7e-15
AK302351_1(AK302351|pid:none) Homo sapiens cDNA FLJ53372 complet... 85 7e-15
AB174681_1(AB174681|pid:none) Macaca fascicularis brain cDNA clo... 85 7e-15
BC025379_1(BC025379|pid:none) Homo sapiens sperm associated anti... 85 7e-15
(Q6PBD6) RecName: Full=WD repeat-containing protein 61; &BC0597... 85 7e-15
CP000845_57(CP000845|pid:none) Acaryochloris marina MBIC11017 pl... 85 7e-15
AL034560_19(AL034560|pid:none) Plasmodium falciparum MAL3P8, com... 84 1e-14
AJ719544_1(AJ719544|pid:none) Gallus gallus mRNA for hypothetica... 84 1e-14
(Q5RE95) RecName: Full=WD repeat-containing protein 5B; &CR8576... 84 1e-14
CR382128_375(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 84 1e-14
CP000117_4653(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 84 1e-14
CP000117_1538(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 84 1e-14
CU074316_1(CU074316|pid:none) Podospora anserina genomic DNA, NW... 84 1e-14
AB169014_1(AB169014|pid:none) Macaca fascicularis testis cDNA, c... 84 1e-14
AL772282_6(AL772282|pid:none) Mouse DNA sequence from clone RP23... 84 1e-14
CP001037_4354(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 84 1e-14
CU640366_848(CU640366|pid:none) Podospora anserina genomic DNA c... 84 1e-14
CP000393_3289(CP000393|pid:none) Trichodesmium erythraeum IMS101... 84 1e-14
AF101480_1(AF101480|pid:none) Trypanosoma brucei pf20 homolog (T... 84 1e-14
AK302307_1(AK302307|pid:none) Homo sapiens cDNA FLJ56174 complet... 84 2e-14
AK105499_1(AK105499|pid:none) Oryza sativa Japonica Group cDNA c... 84 2e-14
CP001291_2528(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 84 2e-14
CP000393_3212(CP000393|pid:none) Trichodesmium erythraeum IMS101... 84 2e-14
(Q9D7H2) RecName: Full=WD repeat-containing protein 5B; &AK0092... 84 2e-14
AK012342_1(AK012342|pid:none) Mus musculus 11 days embryo whole ... 84 2e-14
(Q8TAF3) RecName: Full=WD repeat-containing protein 48; AltName:... 83 2e-14
(Q5RAW8) RecName: Full=WD repeat-containing protein 48; &CR8588... 83 2e-14
(Q8BH57) RecName: Full=WD repeat-containing protein 48; &AK0300... 83 2e-14
AB040882_1(AB040882|pid:none) Homo sapiens mRNA for KIAA1449 pro... 83 2e-14
(Q4R2Z6) RecName: Full=WD repeat-containing protein 48; &AB1794... 83 2e-14
AL832926_1(AL832926|pid:none) Homo sapiens mRNA; cDNA DKFZp666A1... 83 2e-14
AK043970_1(AK043970|pid:none) Mus musculus 10 days neonate corte... 83 2e-14
AM778958_177(AM778958|pid:none) Microcystis aeruginosa PCC 7806 ... 83 2e-14
AJ720686_1(AJ720686|pid:none) Gallus gallus mRNA for hypothetica... 83 2e-14
CU928165_302(CU928165|pid:none) Kluyveromyces thermotolerans str... 83 2e-14
BC006679_1(BC006679|pid:none) Mus musculus WD repeat domain 48, ... 83 2e-14
AK018396_1(AK018396|pid:none) Mus musculus 16 days embryo lung c... 83 2e-14
BC124683_1(BC124683|pid:none) Danio rerio zgc:153492, mRNA (cDNA... 83 3e-14
BA000045_2655(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 83 3e-14
(P87053) RecName: Full=F-box/WD repeat-containing protein pof1; ... 83 3e-14
AF098070_1(AF098070|pid:none) Drosophila melanogaster Lis1 homol... 83 3e-14
(Q7KNS3) RecName: Full=Lissencephaly-1 homolog; Short=L... 83 3e-14
AL392174_12(AL392174|pid:none) Arabidopsis thaliana DNA chromoso... 83 3e-14
AK002149_1(AK002149|pid:none) Homo sapiens cDNA FLJ11287 fis, cl... 83 3e-14
(Q17963) RecName: Full=WD repeat-containing protein tag-125; &T... 82 4e-14
AC117075_70(AC117075|pid:none) Dictyostelium discoideum chromoso... 82 4e-14
AL078635_13(AL078635|pid:none) Amycolatopsis orientalis cosmid p... 82 4e-14
CP001337_2947(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 82 4e-14
AY597210_1(AY597210|pid:none) Chlamydomonas reinhardtii katanin ... 82 4e-14
BX284666_2(BX284666|pid:none) Zebrafish DNA sequence from clone ... 82 4e-14
T22703(T22703)hypothetical protein F55B12.3 - Caenorhabditis ele... 82 5e-14
(Q93794) RecName: Full=F-box/WD repeat-containing protein sel-10... 82 5e-14
AK122511_1(AK122511|pid:none) Mus musculus premature mRNA for mK... 82 5e-14
BC056720_1(BC056720|pid:none) Danio rerio PRP4 pre-mRNA processi... 82 5e-14
AG2400(AG2400) WD-repeat protein [imported] - Nostoc sp. (strain... 82 5e-14
(Q5F3K4) RecName: Full=WD repeat-containing protein 48; &AJ8516... 82 5e-14
(Q8H0T9) RecName: Full=Katanin p80 WD40 repeat-containing subuni... 82 5e-14
(Q7ZUV2) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 82 6e-14
AK297349_1(AK297349|pid:none) Homo sapiens cDNA FLJ55492 complet... 82 6e-14
AP007175_253(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 82 6e-14
CP000393_1925(CP000393|pid:none) Trichodesmium erythraeum IMS101... 82 6e-14
CP000502_174(CP000502|pid:none) Pichia stipitis CBS 6054 chromos... 82 6e-14
CP000806_1073(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 81 8e-14
AF005740_1(AF005740|pid:none) Kluyveromyces lactis transcription... 81 8e-14
CP001037_1947(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 81 8e-14
(Q00659) RecName: Full=Sulfur metabolite repression control prot... 81 8e-14
CP000393_145(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 81 8e-14
U21220_1(U21220|pid:none) Emericella nidulans sulfur metabolite ... 81 8e-14
CP000585_39(CP000585|pid:none) Ostreococcus lucimarinus CCE9901 ... 81 8e-14
(Q8MYE8) RecName: Full=Probable proteasomal ATPase-associated fa... 81 8e-14
CP001325_706(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 81 1e-13
AF326339_1(AF326339|pid:none) Aedes aegypti unknown protein i8 m... 81 1e-13
CR382128_858(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 81 1e-13
BT050222_1(BT050222|pid:none) Salmo salar clone ssal-sjb-015-257... 81 1e-13
AF326340_1(AF326340|pid:none) Aedes aegypti unknown protein i8 m... 81 1e-13
CP000496_271(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 80 1e-13
AF127799_1(AF127799|pid:none) Homo sapiens G protein beta subuni... 80 1e-13
AF016369_1(AF016369|pid:none) Homo sapiens U4/U6 small nuclear r... 80 1e-13
CR382137_211(CR382137|pid:none) Debaryomyces hansenii strain CBS... 80 1e-13
(Q0P593) RecName: Full=WD repeat-containing protein 69; &BC1203... 80 1e-13
AL449305_7(AL449305|pid:none) Human DNA sequence from clone RP11... 80 1e-13
CU633895_601(CU633895|pid:none) Podospora anserina genomic DNA c... 80 1e-13
FM992693_193(FM992693|pid:none) Candida dubliniensis CD36 chromo... 80 1e-13
AK313131_1(AK313131|pid:none) Homo sapiens cDNA, FLJ93619, highl... 80 1e-13
CP000492_814(CP000492|pid:none) Chlorobium phaeobacteroides DSM ... 80 1e-13
(Q3MHE2) RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp... 80 1e-13
CP001100_2468(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 80 1e-13
BT065868_1(BT065868|pid:none) Zea mays full-length cDNA clone ZM... 80 1e-13
AP004312_39(AP004312|pid:none) Synechocystis sp. PCC 6803 plasmi... 80 1e-13
CR457105_1(CR457105|pid:none) Homo sapiens full open reading fra... 80 1e-13
AM238664_1098(AM238664|pid:none) Streptomyces ambofaciens ATCC 2... 80 1e-13
(Q6P2Y2) RecName: Full=WD repeat-containing protein 69; &BC0642... 80 1e-13
AF306867_1(AF306867|pid:none) Aedes triseriatus unknown mRNA. 80 1e-13
CP001037_1497(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 80 2e-13
AF474160_1(AF474160|pid:none) Candida glabrata global repressor ... 80 2e-13
FM992688_6(FM992688|pid:none) Candida dubliniensis CD36 chromoso... 80 2e-13
AY428810_1(AY428810|pid:none) Solanum chacoense notchless-like p... 80 2e-13
AM502224_3(AM502224|pid:none) Leishmania infantum chromosome 6. 80 2e-13
AM437088_1(AM437088|pid:none) Vitis vinifera contig VV78X105383.... 80 2e-13
AD1842(AD1842) WD-40 repeat protein [imported] - Nostoc sp. (str... 80 2e-13
AK098821_1(AK098821|pid:none) Homo sapiens cDNA FLJ25955 fis, cl... 80 2e-13
BA000039_488(BA000039|pid:none) Thermosynechococcus elongatus BP... 80 2e-13
CR940348_798(CR940348|pid:none) Theileria annulata strain Ankara... 80 2e-13
(Q8W1K8) RecName: Full=Protein Mut11; AltName: Full=Mut11p; &AF... 80 2e-13
AM462218_2(AM462218|pid:none) Vitis vinifera contig VV78X125617.... 80 2e-13
(Q8N136) RecName: Full=WD repeat-containing protein 69; &AC0730... 80 2e-13
FN357410_12(FN357410|pid:none) Schistosoma mansoni genome sequen... 80 2e-13
CU928169_422(CU928169|pid:none) Kluyveromyces thermotolerans str... 80 2e-13
AE017343_599(AE017343|pid:none) Cryptococcus neoformans var. neo... 80 2e-13
AK301861_1(AK301861|pid:none) Homo sapiens cDNA FLJ54195 complet... 80 2e-13
A96638(A96638) hypothetical protein F11P17.7 [imported] - Arabid... 80 2e-13
AE014296_3092(AE014296|pid:none) Drosophila melanogaster chromos... 80 2e-13
AY064077_1(AY064077|pid:none) Aedes aegypti clone unKRc2 unknown... 80 2e-13
AB018110_4(AB018110|pid:none) Arabidopsis thaliana genomic DNA, ... 79 3e-13
AK016201_1(AK016201|pid:none) Mus musculus adult male testis cDN... 79 3e-13
(Q5FWQ6) RecName: Full=WD repeat-containing protein 69; &BC0892... 79 3e-13
BC145995_1(BC145995|pid:none) Mus musculus WD repeat domain 69, ... 79 3e-13
CR954205_38(CR954205|pid:none) Ostreococcus tauri strain OTTH059... 79 3e-13
CP001037_6067(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 79 3e-13
(Q5A7Q3) RecName: Full=Pre-mRNA-splicing factor PRP46; AltName: ... 79 3e-13
AM270009_6(AM270009|pid:none) Aspergillus niger contig An02c0140... 79 3e-13
(Q5BK30) RecName: Full=WD repeat-containing protein 69; &BC0912... 79 3e-13
AK016977_1(AK016977|pid:none) Mus musculus adult male testis cDN... 79 3e-13
CU928178_641(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 79 4e-13
(P16649) RecName: Full=General transcriptional corepressor TUP1;... 79 4e-13
BA000045_725(BA000045|pid:none) Gloeobacter violaceus PCC 7421 D... 79 4e-13
M31733_1(M31733|pid:none) S.cerevisiae TUP1 protein gene, comple... 79 4e-13
AP009552_5491(AP009552|pid:none) Microcystis aeruginosa NIES-843... 79 4e-13
X16365_1(X16365|pid:none) Yeast suppressor gene for flocculation... 79 4e-13
(Q1LV15) RecName: Full=WD repeat-containing protein 69; &BC1244... 79 4e-13
AK090114_1(AK090114|pid:none) Mus musculus RCB-1283 B16 melanoma... 79 5e-13
BT086255_1(BT086255|pid:none) Zea mays full-length cDNA clone ZM... 79 5e-13
CP001291_699(CP001291|pid:none) Cyanothece sp. PCC 7424, complet... 79 5e-13
CP000854_3359(CP000854|pid:none) Mycobacterium marinum M, comple... 79 5e-13
CR860672_1(CR860672|pid:none) Pongo abelii mRNA; cDNA DKFZp459M2... 79 5e-13
(Q9DAW6) RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp... 79 5e-13
CP001037_148(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 79 5e-13
CP001013_1798(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 78 7e-13
AM910992_223(AM910992|pid:none) Plasmodium knowlesi strain H chr... 78 7e-13
(Q8MY12) RecName: Full=Myosin heavy chain kinase C; Sho... 78 7e-13
AF079447_1(AF079447|pid:none) Dictyostelium discoideum myosin he... 78 7e-13
AP009552_1750(AP009552|pid:none) Microcystis aeruginosa NIES-843... 78 7e-13
BC108505_1(BC108505|pid:none) Xenopus laevis hypothetical protei... 78 7e-13
AY738474_1(AY738474|pid:none) Gemmata sp. Wa1-1 WD-repeat protei... 78 7e-13
AH2154(AH2154) WD-repeat protein [imported] - Nostoc sp. (strain... 78 7e-13
CT005245_3(CT005245|pid:none) Leishmania major strain Friedlin, ... 78 7e-13
BC075548_1(BC075548|pid:none) Xenopus tropicalis MGC89488 protei... 78 7e-13
(Q9NDC9) RecName: Full=Lissencephaly-1 homolog; AltName: Full=Pr... 78 9e-13
AL732349_11(AL732349|pid:none) Oryza sativa genomic DNA, chromos... 78 9e-13
CR382126_571(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 78 9e-13
BC073405_1(BC073405|pid:none) Xenopus laevis MGC80868 protein, m... 78 9e-13
BT075698_1(BT075698|pid:none) Osmerus mordax clone omor-rgc-001-... 78 9e-13
(O75529) RecName: Full=TAF5-like RNA polymerase II p300/CBP-asso... 78 9e-13
AJ009770_1(AJ009770|pid:none) Homo sapiens mRNA for putative tra... 78 9e-13
AL953881_1(AL953881|pid:none) Zebrafish DNA sequence from clone ... 77 1e-12
AP007159_126(AP007159|pid:none) Aspergillus oryzae RIB40 genomic... 77 1e-12
AX722159_1(AX722159|pid:none) Sequence 17 from Patent WO03024999... 77 1e-12
AE016820_549(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 77 1e-12
AF391290_3(AF391290|pid:none) Branchiostoma floridae cosmid MPMG... 77 1e-12
(Q61FW2) RecName: Full=F-box/WD repeat-containing protein sel-10... 77 1e-12
AM778930_22(AM778930|pid:none) Microcystis aeruginosa PCC 7806 g... 77 1e-12
BT001736_1(BT001736|pid:none) Drosophila melanogaster RE72568 fu... 77 1e-12
AK032174_1(AK032174|pid:none) Mus musculus adult male olfactory ... 77 1e-12
BC037320_1(BC037320|pid:none) Homo sapiens F-box and WD-40 domai... 77 1e-12
(Q42384) RecName: Full=PP1/PP2A phosphatases pleiotropic regulat... 77 1e-12
AB493682_1(AB493682|pid:none) Arabidopsis thaliana At4g15900 mRN... 77 1e-12
(Q969H0) RecName: Full=F-box/WD repeat-containing protein 7; Alt... 77 1e-12
AK223449_1(AK223449|pid:none) Homo sapiens mRNA for F-box protei... 77 1e-12
AF383178_1(AF383178|pid:none) Homo sapiens F-box protein FBX30 m... 77 1e-12
AB070844_1(AB070844|pid:none) Aspergillus oryzae sconB gene for ... 77 1e-12
(Q9VZF4) RecName: Full=F-box/WD repeat-containing protein 7; Alt... 77 1e-12
AP008213_479(AP008213|pid:none) Oryza sativa (japonica cultivar-... 77 2e-12
BC124403_1(BC124403|pid:none) Danio rerio WD repeat domain 69, m... 77 2e-12
AL606668_18(AL606668|pid:none) Oryza sativa genomic DNA, chromos... 77 2e-12
AP004273_30(AP004273|pid:none) Oryza sativa Japonica Group genom... 77 2e-12
CP001101_2134(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 77 2e-12
(Q9EPV5) RecName: Full=Apoptotic protease-activating factor 1; ... 77 2e-12
CP000686_3299(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 77 2e-12
BC056099_1(BC056099|pid:none) Xenopus laevis hypothetical protei... 77 2e-12
CP000117_2100(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 77 2e-12
CT573213_3533(CT573213|pid:none) Frankia alni str. ACN14A chromo... 77 2e-12
AP009552_3560(AP009552|pid:none) Microcystis aeruginosa NIES-843... 77 2e-12
AP003517_26(AP003517|pid:none) Oryza sativa Japonica Group genom... 77 2e-12
AG1889(AG1889) WD-40 repeat protein [imported] - Nostoc sp. (str... 76 3e-12
(Q4P9P9) RecName: Full=Nuclear distribution protein PAC1; AltNam... 76 3e-12
CR405685_1(CR405685|pid:none) Zebrafish DNA sequence from clone ... 76 3e-12
(Q91WQ5) RecName: Full=TAF5-like RNA polymerase II p300/CBP-asso... 76 3e-12
AM778874_8(AM778874|pid:none) Microcystis aeruginosa PCC 7806 ge... 76 3e-12
(Q6FJZ9) RecName: Full=Pre-mRNA-splicing factor PRP46; AltName: ... 76 3e-12
CP001291_1475(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 76 3e-12
BC160901_1(BC160901|pid:none) Rattus norvegicus TAF5-like RNA po... 76 3e-12
(Q9D994) RecName: Full=WD repeat-containing protein 38; &AK0072... 76 3e-12
(Q58D20) RecName: Full=Notchless protein homolog 1; 76 3e-12
CR812943_6(CR812943|pid:none) Zebrafish DNA sequence from clone ... 76 3e-12
(Q5JTN6) RecName: Full=WD repeat-containing protein 38; &AL3549... 76 3e-12
CR859650_1(CR859650|pid:none) Pongo abelii mRNA; cDNA DKFZp459C1... 76 3e-12
CP000393_1374(CP000393|pid:none) Trichodesmium erythraeum IMS101... 76 3e-12
AM746676_2689(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 76 3e-12
CR382125_1064(CR382125|pid:none) Kluyveromyces lactis strain NRR... 76 3e-12
BT021777_1(BT021777|pid:none) Bos taurus Notchless gene homolog ... 76 3e-12
CP000501_7(CP000501|pid:none) Pichia stipitis CBS 6054 chromosom... 76 3e-12
AK220340_1(AK220340|pid:none) Mus musculus mRNA for mKIAA0413 pr... 75 5e-12
BC131683_1(BC131683|pid:none) Mus musculus apoptotic peptidase a... 75 5e-12
AY463620_1(AY463620|pid:none) Arabidopsis thaliana TAF5 (At5g251... 75 5e-12
CP000089_3569(CP000089|pid:none) Dechloromonas aromatica RCB, co... 75 6e-12
CP000117_2141(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 75 6e-12
CP001037_5275(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 75 6e-12
CP001038_141(CP001038|pid:none) Nostoc punctiforme PCC 73102 pla... 75 6e-12
CP000839_311(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 75 6e-12
AK154163_1(AK154163|pid:none) Mus musculus NOD-derived CD11c +ve... 75 6e-12
BT061165_1(BT061165|pid:none) Zea mays full-length cDNA clone ZM... 75 6e-12
CR382133_567(CR382133|pid:none) Debaryomyces hansenii strain CBS... 75 6e-12
AK011064_1(AK011064|pid:none) Mus musculus 13 days embryo liver ... 75 6e-12
EU961646_1(EU961646|pid:none) Zea mays clone 237328 unknown mRNA. 75 6e-12
CU074315_1(CU074315|pid:none) Podospora anserina genomic DNA, NW... 75 8e-12
CP001110_343(CP001110|pid:none) Pelodictyon phaeoclathratiforme ... 75 8e-12
(Q148I1) RecName: Full=Proteasomal ATPase-associated factor 1; A... 75 8e-12
AC133571_4(AC133571|pid:none) Medicago truncatula clone mth2-10h... 75 8e-12
AE016820_576(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 75 8e-12
(Q8BHD1) RecName: Full=WD repeat-containing protein 51B; &AK045... 75 8e-12
CP001099_247(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, ... 75 8e-12
AF323581_1(AF323581|pid:none) Podospora anserina beta transducin... 75 8e-12
BC075582_1(BC075582|pid:none) Xenopus tropicalis TAF5-like RNA p... 75 8e-12
AK111641_1(AK111641|pid:none) Oryza sativa Japonica Group cDNA c... 74 1e-11
S62507(T38502;S62507) hypothetical trp-asp repeat-containing pro... 74 1e-11
AF064071_1(AF064071|pid:none) Mus musculus apoptotic protease ac... 74 1e-11
CP000820_1838(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 74 1e-11
FN392321_803(FN392321|pid:none) Pichia pastoris GS115 chromosome... 74 1e-11
AP008209_1416(AP008209|pid:none) Oryza sativa (japonica cultivar... 74 1e-11
(O88879) RecName: Full=Apoptotic protease-activating factor 1; ... 74 1e-11
AL844505_66(AL844505|pid:none) Plasmodium falciparum 3D7 chromos... 74 1e-11
(O43017) RecName: Full=Set1 complex component swd3; Sho... 74 1e-11
CP001097_2083(CP001097|pid:none) Chlorobium limicola DSM 245, co... 74 1e-11
AC087851_1(AC087851|pid:none) Oryza sativa chromosome 3 BAC OSJN... 74 1e-11
AK111863_1(AK111863|pid:none) Oryza sativa Japonica Group cDNA c... 74 1e-11
CR940353_257(CR940353|pid:none) Theileria annulata strain Ankara... 74 1e-11
AP009552_5466(AP009552|pid:none) Microcystis aeruginosa NIES-843... 74 1e-11
CP000594_159(CP000594|pid:none) Ostreococcus lucimarinus CCE9901... 74 1e-11
AF001687_1(AF001687|pid:none) Homo sapiens U4/U6 snRNP 60 kDa pr... 74 1e-11
AL603745_5(AL603745|pid:none) Mouse DNA sequence from clone RP23... 74 1e-11
CU633901_36(CU633901|pid:none) Podospora anserina genomic DNA ch... 74 1e-11
AJ012588_1(AJ012588|pid:none) Drosophila melanogaster mRNA for N... 74 1e-11
AE014134_131(AE014134|pid:none) Drosophila melanogaster chromoso... 74 1e-11
(Q6C709) RecName: Full=Pre-mRNA-splicing factor PRP46; AltName: ... 74 1e-11
DQ294261_1(DQ294261|pid:none) Solanum tuberosum clone 111C07 ver... 74 1e-11
GM960771_1(GM960771|pid:none) Sequence 7725 from Patent WO200814... 74 1e-11
AK222501_1(AK222501|pid:none) Homo sapiens mRNA for hypothetical... 74 2e-11
(Q9NVX2) RecName: Full=Notchless protein homolog 1; &AK001320_1... 74 2e-11
AE014298_1819(AE014298|pid:none) Drosophila melanogaster chromos... 74 2e-11
CP000806_3577(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 74 2e-11
BA000045_2244(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 74 2e-11
BC002884_1(BC002884|pid:none) Homo sapiens notchless homolog 1 (... 74 2e-11
EU746019_1(EU746019|pid:none) Drosophila simulans isolate MD004 ... 74 2e-11
(Q8VEJ4) RecName: Full=Notchless protein homolog 1; &BC018399_1... 74 2e-11
EU746018_1(EU746018|pid:none) Drosophila simulans isolate MD003 ... 74 2e-11
EF667356_1(EF667356|pid:none) Trypanosoma carassii similar to ac... 74 2e-11
CP000240_1166(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-1... 74 2e-11
CR954210_23(CR954210|pid:none) Ostreococcus tauri strain OTTH059... 74 2e-11
CT573213_6188(CT573213|pid:none) Frankia alni str. ACN14A chromo... 74 2e-11
BC088671_1(BC088671|pid:none) Xenopus laevis cDNA clone MGC:9909... 74 2e-11
AP007169_287(AP007169|pid:none) Aspergillus oryzae RIB40 genomic... 73 2e-11
AL832918_1(AL832918|pid:none) Homo sapiens mRNA; cDNA DKFZp762M0... 73 2e-11
AM427950_1(AM427950|pid:none) Vitis vinifera contig VV78X122096.... 73 2e-11
CP000828_4370(CP000828|pid:none) Acaryochloris marina MBIC11017,... 73 2e-11
A55532(A55532) myosin-heavy-chain kinase (EC 2.7.1.129) A - slim... 73 2e-11
AF462796_1(AF462796|pid:none) Arabidopsis thaliana At1g73720/F25... 73 2e-11
BC031227_1(BC031227|pid:none) Homo sapiens WD repeat domain 88, ... 73 2e-11
BC006142_1(BC006142|pid:none) Homo sapiens proteasomal ATPase-as... 73 2e-11
BC148666_1(BC148666|pid:none) Synthetic construct Homo sapiens c... 73 2e-11
CP000828_3398(CP000828|pid:none) Acaryochloris marina MBIC11017,... 73 2e-11
(Q5ZK69) RecName: Full=Proteasomal ATPase-associated factor 1; A... 73 2e-11
(Q6ZMY6) RecName: Full=WD repeat-containing protein 88; AltName:... 73 2e-11
AB171255_1(AB171255|pid:none) Macaca fascicularis brain cDNA clo... 73 2e-11
AC012679_13(AC012679|pid:none) Arabidopsis thaliana chromosome 1... 73 2e-11
CR382131_1322(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 73 2e-11
AE013599_962(AE013599|pid:none) Drosophila melanogaster chromoso... 73 3e-11
CP000820_1755(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 73 3e-11
(Q5RD06) RecName: Full=WD repeat-containing protein 51B; &CR858... 73 3e-11
(Q54Y96) RecName: Full=WD40 repeat-containing protein smu1; 73 3e-11
GM960733_1(GM960733|pid:none) Sequence 7687 from Patent WO200814... 73 3e-11
AY032884_1(AY032884|pid:none) Lycopersicon esculentum WD-40 repe... 73 3e-11
AF087895_1(AF087895|pid:none) Homo sapiens G-16 mRNA, complete c... 73 3e-11
BC028628_1(BC028628|pid:none) Homo sapiens proteasomal ATPase-as... 73 3e-11
BT072537_1(BT072537|pid:none) Salmo salar clone ssal-rgf-529-231... 73 3e-11
CP000719_62(CP000719|pid:none) Yersinia pseudotuberculosis IP 31... 73 3e-11
(Q93847) RecName: Full=Uncharacterized WD repeat-containing prot... 72 4e-11
T16607(T16607)hypothetical protein K10B2.1 - Caenorhabditis eleg... 72 4e-11
AY648817_1(AY648817|pid:none) Danio rerio pleiotropic regulator ... 72 4e-11
JC4239(JC4239)phospholipase A2-activating protein - rat 72 4e-11
(P69103) RecName: Full=Guanine nucleotide-binding protein subuni... 72 4e-11
BC070729_1(BC070729|pid:none) Xenopus laevis hypothetical protei... 72 4e-11
CU633454_96(CU633454|pid:none) Podospora anserina genomic DNA ch... 72 4e-11
U17901_1(U17901|pid:none) Rattus norvegicus phospholipase A-2-ac... 72 4e-11
FN392320_711(FN392320|pid:none) Pichia pastoris GS115 chromosome... 72 4e-11
(Q9C1X1) RecName: Full=Periodic tryptophan protein 2 homolog; &... 72 4e-11
EU962813_1(EU962813|pid:none) Zea mays clone 245733 PP1/PP2A pho... 72 4e-11
AP009493_3398(AP009493|pid:none) Streptomyces griseus subsp. gri... 72 4e-11
(P54319) RecName: Full=Phospholipase A-2-activating protein; ... 72 4e-11
CR940348_297(CR940348|pid:none) Theileria annulata strain Ankara... 72 5e-11
(Q4WT34) RecName: Full=Pre-mRNA-splicing factor prp46; AltName: ... 72 5e-11
AK101611_1(AK101611|pid:none) Oryza sativa Japonica Group cDNA c... 72 5e-11
AF100286_1(AF100286|pid:none) Trypanosoma congolense strain IL11... 72 5e-11
(Q9I9H8) RecName: Full=Apoptotic protease-activating factor 1; ... 72 5e-11
BC045888_1(BC045888|pid:none) Danio rerio WD repeat domain 51A, ... 72 5e-11
BA000045_1630(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 72 5e-11
AJ243107_1(AJ243107|pid:none) Homo sapiens mRNA for apoptotic pr... 72 5e-11

>BC072906_1(BC072906|pid:none) Xenopus laevis hypothetical protein
LOC443590, mRNA (cDNA clone IMAGE:5074462), partial cds.
Length = 318

Score = 189 bits (480), Expect = 2e-46
Identities = 94/208 (45%), Positives = 131/208 (62%), Gaps = 6/208 (2%)
Frame = +1

Query: 37 INMVKAYLKFVQDKVFGLISTSNS------ILDGSGKLAITGCGERISIWDLRKQVLNQS 198
+ + K YL++ VFGLI++ + + G+ G E + IWD RK +
Sbjct: 1 MGITKQYLRYSASAVFGLIASQKANVTFITLRGEKGRYVAVGACEHVFIWDTRKG--EKV 58

Query: 199 LYEEDIKAEVTNVCLSKDGALLASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNRL 378
L + K EVT +C S DG LA GY DGSIRI+S+ + FNGH+ +VTT+ ++ L
Sbjct: 59 LILQGQKQEVTRLCPSPDGLSLAVGYEDGSIRIFSLLSGESGITFNGHKAAVTTLNYDHL 118

Query: 379 GNILVSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDT 558
G LVSGSKDT+VIVWD+I ESGL+RL+GH+D IT L+ N L+TS KD +K WD
Sbjct: 119 GGRLVSGSKDTDVIVWDVINESGLYRLKGHKDAITQALFLKEKNLLVTSGKDTLVKWWDL 178

Query: 559 ETQHCIQTIVGHRNPIWGIDVNPDETRL 642
+TQHC QT+VGHR +WG+ + +E+R+
Sbjct: 179 DTQHCFQTMVGHRTEVWGLTILSEESRI 206

Score = 38.5 bits (88), Expect = 0.61
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 16/135 (11%)
Frame = +1

Query: 76 KVFGLISTSNSILDGSGKLAITGC------GERIS--------IWDLRKQVLNQS-LYE- 207
++F L+S + I K A+T G +S +WD V+N+S LY
Sbjct: 90 RIFSLLSGESGITFNGHKAAVTTLNYDHLGGRLVSGSKDTDVIVWD----VINESGLYRL 145

Query: 208 EDIKAEVTNVCLSKDGALLASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNRLGNI 387
+ K +T K+ LL + D ++ W + GHR V +T +
Sbjct: 146 KGHKDAITQALFLKEKNLLVTSGKDTLVKWWDLDTQHCFQTMVGHRTEVWGLTILSEESR 205

Query: 388 LVSGSKDTEVIVWDI 432
+++GS D+E+ W+I
Sbjct: 206 ILTGSADSELRAWNI 220

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,021,253,896
Number of extensions: 39114067
Number of successful extensions: 209023
Number of sequences better than 10.0: 4462
Number of HSP's gapped: 197740
Number of HSP's successfully gapped: 13111
Length of query: 478
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 346
Effective length of database: 623,955,076
Effective search space: 215888456296
Effective search space used: 215888456296
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.63 gvh: 0.40 alm: 0.45 top: 0.53 tms: 0.00 mit: 0.27 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.40 pox: 0.00 px2: 0.50 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: nuclear
32.0 %: cytoplasmic
20.0 %: mitochondrial
4.0 %: cytoskeletal

>> prediction for Contig-U12423-1 is nuc

VS (DIR, S) 0
VH (FL, L) 4
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0