NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U12422-1
Contig ID Contig-U12422-1
Contig update 2002.12.18
Contig sequence 
>Contig-U12422-1 (Contig-U12422-1Q) /CSM_Contig/Contig-U12422-1Q.Seq.d
AAGGTTCATTCCCAGTTGATCATGTTGAAATTTTATTATNTGATGTACCA
CCACCACAACCAGTTCATCCAGTTGCTACTTTATCACCCCCAATGTCACC
AACTATTCCAAACATTACAAATACTCCACCACCACCACCATCAATTAGTG
ATTCAATGTCACCACCACCACAAGTTGGTATGTTACCACCACCACCTCCA
CCATCAGTTATGGGTTCGACCAAACCAATTGAAATTCCATCATTAGGTAT
TCCACCACCACCACCATCATCATCAAATTCATCAGTACCAAATTCACCAA
TTGGTTCACCAATGATGGGTATTCCACCACCACCACCAACTATTTCAGTT
CATTCATTGTCAAACAGTGGTAATAGTACTCCTCCACCACCACTACCATC
ACTTTCAACTCCACCAACACTTTCAACTCCACCACCAATTTCATCACCAC
CAAACTTTAGATCATCATTAAGAGTATCAATGCTTAATACATCAAATGAT
GGTGGTGATAATAGTTCTGATGATCCATCAAAGAGATTAACAGTTTCGCC
AGCCATTGGTACCGATAGTCAATNGGCANAATGGGCATCAACTCGTTTCC
GTTCATTCAAGAGAGCATCAACATNAATCAACAACAAGC----------G
CAGTCAATGAAACCGCAGGTATTAGTAAAGTGGTATCCGAGACCGATATG
ATTTACGATGTTTTGGCTCGTTGGGAACAAAGTGAAGAAAAGGGTGAATT
CTATTTCCAAGTTCGTCGTAGATTCTTCTTGGATGATGTAAATAAAATTT
TGGATCAAGAGCATCTTTGGACTGATGATGATATTTGTTTCGAGTTAACC
TATTGTCAAATTCGTGATGAATGGATGAAAAGGTTTATACACAAAATGTC
AATGAGAAAGATTCATCGATTATTGCCGCAATCTTAATTCAATTGTTTAT
ATCCAAATCAATCCAAATTGGTTTTAACCAAAGAGGTTGTTCGTCAAGTT
TTACCTGATCAAAATTTTGAACTCCTCCATAATATAAAGGTTTGGATCTC
AATGATTGAATCTCAAATCTTTGAATTGGTCTCTCAAACCCCAGAATACT
TGAAATTGATGTTTATCAATTTAATTGGTTCAAAATCACCATTATTCGGT
TGTACATTATTTAACATTCAACAAAAAGAAAATCCACCAAAAGCTTGGTT
GGCCATCAACAAAAAAGGTGTTTCCATTTTCGATCCACACACTAAAGAAT
CTAAAAACTTTTGGACTTTCCAATCAATCTCAAATGTCGCTTTCACTGAT
GACACTTTTTGTATTATGACTGGTAATTTAATGAAACCAATTAAACAAAC
CTTTACAACTGATGAACATTCTTCAATTGCTTCAGTTTATCAATTTTATT
CTTCTCAATAAAAAAATTAAAATAAAATAAAATAAATA
Gap gap included
Contig length 1428
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 4521809
End point 4523239
Strand (PLUS/MINUS) PLUS
Number of clones 4
Number of EST 5
Link to clone list U12422
List of clone(s) 

est1=VHK313Z,-1,640
est2=VHC846F,161,410
est3=VHA150Z,641,1430
est4=VHH881Z,823,1349
est5=VHC846Z,847,1429
Translated Amino Acid sequence 
GSFPVDHVEILLXDVPPPQPVHPVATLSPPMSPTIPNITNTPPPPPSISDSMSPPPQVGM
LPPPPPPSVMGSTKPIEIPSLGIPPPPPSSSNSSVPNSPIGSPMMGIPPPPPTISVHSLS
NSGNSTPPPPLPSLSTPPTLSTPPPISSPPNFRSSLRVSMLNTSNDGGDNSSDDPSKRLT
VSPAIGTDSQXAXWASTRFRSFKRASTXINNK---

---AVNETAGISKVVSETDMIYDVLARWEQSEEKGEFYFQVRRRFFLDDVNKILDQEHLW
TDDDICFELTYCQIRDEWMKRFIHKMSMRKIHRLLPQS*fnclypnqsklvltkevvrqv
lpdqnfellhnikvwismiesqifelvsqtpeylklmfinligsksplfgctlfniqqke
nppkawlainkkgvsifdphtkesknfwtfqsisnvaftddtfcimtgnlmkpikqtftt
dehssiasvyqfyssq*kn*nkik*i
Translated Amino Acid sequence (All Frames) 
Frame A:
kvhsqlimlkfyyxmyhhhnqfiqlllyhpqchqlfqtlqilhhhhhqlviqchhhhklv
cyhhhlhhqlwvrpnqlkfhh*vfhhhhhhhqihqyqihqlvhq*wvfhhhhqlfqfihc
qtvvivllhhhyhhfqlhqhfqlhhqfhhhqtldhh*eyqclihqmmvviivlmihqrd*
qfrqplvpivnxxnghqlvsvhsrehqhxstts---

---AVNETAGISKVVSETDMIYDVLARWEQSEEKGEFYFQVRRRFFLDDVNKILDQEHLW
TDDDICFELTYCQIRDEWMKRFIHKMSMRKIHRLLPQS*fnclypnqsklvltkevvrqv
lpdqnfellhnikvwismiesqifelvsqtpeylklmfinligsksplfgctlfniqqke
nppkawlainkkgvsifdphtkesknfwtfqsisnvaftddtfcimtgnlmkpikqtftt
dehssiasvyqfyssq*kn*nkik*i

Frame B:
rfips*sc*nfix*ctttttsssscyfitpnvtnyskhykysttttin**fnvttttswy
vttttstisygfdqtn*nsiirysttttiiikfistkftnwftndgysttttnyfssfiv
kqw**yssttttitfnstntfnsttnfittkl*iiiksina*yik*ww***f**sikein
sfashwyr*sxgxmginsfpfiqesinxnqqq---

---qsmkpqvlvkwyprpi*ftmfwlvgnkvkkrvnsiskfvvdsswmm*ikfwiksifg
lmmifvss*pivkfvmng*kglytkcq*erfidycrnlnsivyiqinpnwf*pkrlfvkf
ylikilnssii*rfgsq*lnlkslnwslkpqnt*n*clsi*lvqnhhysvvhyltfnkkk
ihqklgwpstkkvfpfsihtlknlktfglsnqsqmslslmtlfvl*lvi**nqlnkplql
mnilqllqfinfillnkkikik*nk

Frame C:
GSFPVDHVEILLXDVPPPQPVHPVATLSPPMSPTIPNITNTPPPPPSISDSMSPPPQVGM
LPPPPPPSVMGSTKPIEIPSLGIPPPPPSSSNSSVPNSPIGSPMMGIPPPPPTISVHSLS
NSGNSTPPPPLPSLSTPPTLSTPPPISSPPNFRSSLRVSMLNTSNDGGDNSSDDPSKRLT
VSPAIGTDSQXAXWASTRFRSFKRASTXINNK---

---sq*nrry**sgirdrydlrcfgslgtk*rkg*ilfpsss*illg*ck*nfgsrasld
***ylfrvnllsns**mdekvytqnvnekdssiiaailiqlfisksiqigfnqrgcsssf
t*skf*tpp*ykgldlnd*isnl*iglsnprileidvyqfnwfkitiirlyii*hstkrk
stkslvghqqkrcfhfrsth*ri*klldfpinlkcrfh**hflyydw*fnetn*tnlyn*
*tffncfslsilffsikklk*nkin
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U12422-1 (Contig-U12422-1Q)
/CSM_Contig/Contig-U12422-1Q.Seq.d
         (1438 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U12422-1 (Contig-U12422-1Q) /CSM_Contig/Conti...  2704  0.0
Contig-U04139-1 (Contig-U04139-1Q) /CSM_Contig/Conti...   513  e-145
Contig-U14441-1 (Contig-U14441-1Q) /CSM_Contig/Conti...    48  3e-05
Contig-U13673-1 (Contig-U13673-1Q) /CSM_Contig/Conti...    48  3e-05
Contig-U12127-1 (Contig-U12127-1Q) /CSM_Contig/Conti...    46  1e-04
Contig-U12074-1 (Contig-U12074-1Q) /CSM_Contig/Conti...    46  1e-04
Contig-U14764-1 (Contig-U14764-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U13021-1 (Contig-U13021-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U12360-1 (Contig-U12360-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U08778-1 (Contig-U08778-1Q) /CSM_Contig/Conti...    42  0.002

>Contig-U12422-1 (Contig-U12422-1Q) /CSM_Contig/Contig-U12422-1Q.Seq.d
          Length = 1438

 Score = 2704 bits (1364), Expect = 0.0
 Identities = 1406/1406 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    aaggttcattcccagttgatcatgttgaaattttattatntgatgtaccaccaccacaac 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    aaggttcattcccagttgatcatgttgaaattttattatntgatgtaccaccaccacaac 60

                                                                        
Query: 61   cagttcatccagttgctactttatcacccccaatgtcaccaactattccaaacattacaa 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   cagttcatccagttgctactttatcacccccaatgtcaccaactattccaaacattacaa 120

                                                                        
Query: 121  atactccaccaccaccaccatcaattagtgattcaatgtcaccaccaccacaagttggta 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  atactccaccaccaccaccatcaattagtgattcaatgtcaccaccaccacaagttggta 180

                                                                        
Query: 181  tgttaccaccaccacctccaccatcagttatgggttcgaccaaaccaattgaaattccat 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  tgttaccaccaccacctccaccatcagttatgggttcgaccaaaccaattgaaattccat 240

                                                                        
Query: 241  cattaggtattccaccaccaccaccatcatcatcaaattcatcagtaccaaattcaccaa 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  cattaggtattccaccaccaccaccatcatcatcaaattcatcagtaccaaattcaccaa 300

                                                                        
Query: 301  ttggttcaccaatgatgggtattccaccaccaccaccaactatttcagttcattcattgt 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  ttggttcaccaatgatgggtattccaccaccaccaccaactatttcagttcattcattgt 360

                                                                        
Query: 361  caaacagtggtaatagtactcctccaccaccactaccatcactttcaactccaccaacac 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  caaacagtggtaatagtactcctccaccaccactaccatcactttcaactccaccaacac 420

                                                                        
Query: 421  tttcaactccaccaccaatttcatcaccaccaaactttagatcatcattaagagtatcaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  tttcaactccaccaccaatttcatcaccaccaaactttagatcatcattaagagtatcaa 480

                                                                        
Query: 481  tgcttaatacatcaaatgatggtggtgataatagttctgatgatccatcaaagagattaa 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  tgcttaatacatcaaatgatggtggtgataatagttctgatgatccatcaaagagattaa 540

                                                                        
Query: 541  cagtttcgccagccattggtaccgatagtcaatnggcanaatgggcatcaactcgtttcc 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  cagtttcgccagccattggtaccgatagtcaatnggcanaatgggcatcaactcgtttcc 600

                                                                        
Query: 601  gttcattcaagagagcatcaacatnaatcaacaacaagcnnnnnnnnnngcagtcaatga 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  gttcattcaagagagcatcaacatnaatcaacaacaagcnnnnnnnnnngcagtcaatga 660

                                                                        
Query: 661  aaccgcaggtattagtaaagtggtatccgagaccgatatgatttacgatgttttggctcg 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661  aaccgcaggtattagtaaagtggtatccgagaccgatatgatttacgatgttttggctcg 720

                                                                        
Query: 721  ttgggaacaaagtgaagaaaagggtgaattctatttccaagttcgtcgtagattcttctt 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721  ttgggaacaaagtgaagaaaagggtgaattctatttccaagttcgtcgtagattcttctt 780

                                                                        
Query: 781  ggatgatgtaaataaaattttggatcaagagcatctttggactgatgatgatatttgttt 840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781  ggatgatgtaaataaaattttggatcaagagcatctttggactgatgatgatatttgttt 840

                                                                        
Query: 841  cgagttaacctattgtcaaattcgtgatgaatggatgaaaaggtttatacacaaaatgtc 900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841  cgagttaacctattgtcaaattcgtgatgaatggatgaaaaggtttatacacaaaatgtc 900

                                                                        
Query: 901  aatgagaaagattcatcgattattgccgcaatcttaattcaattgtttatatccaaatca 960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901  aatgagaaagattcatcgattattgccgcaatcttaattcaattgtttatatccaaatca 960

                                                                        
Query: 961  atccaaattggttttaaccaaagaggttgttcgtcaagttttacctgatcaaaattttga 1020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961  atccaaattggttttaaccaaagaggttgttcgtcaagttttacctgatcaaaattttga 1020

                                                                        
Query: 1021 actcctccataatataaaggtttggatctcaatgattgaatctcaaatctttgaattggt 1080
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 actcctccataatataaaggtttggatctcaatgattgaatctcaaatctttgaattggt 1080

                                                                        
Query: 1081 ctctcaaaccccagaatacttgaaattgatgtttatcaatttaattggttcaaaatcacc 1140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ctctcaaaccccagaatacttgaaattgatgtttatcaatttaattggttcaaaatcacc 1140

                                                                        
Query: 1141 attattcggttgtacattatttaacattcaacaaaaagaaaatccaccaaaagcttggtt 1200
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 attattcggttgtacattatttaacattcaacaaaaagaaaatccaccaaaagcttggtt 1200

                                                                        
Query: 1201 ggccatcaacaaaaaaggtgtttccattttcgatccacacactaaagaatctaaaaactt 1260
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ggccatcaacaaaaaaggtgtttccattttcgatccacacactaaagaatctaaaaactt 1260

                                                                        
Query: 1261 ttggactttccaatcaatctcaaatgtcgctttcactgatgacactttttgtattatgac 1320
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ttggactttccaatcaatctcaaatgtcgctttcactgatgacactttttgtattatgac 1320

                                                                        
Query: 1321 tggtaatttaatgaaaccaattaaacaaacctttacaactgatgaacattcttcaattgc 1380
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 tggtaatttaatgaaaccaattaaacaaacctttacaactgatgaacattcttcaattgc 1380

                                      
Query: 1381 ttcagtttatcaattttattcttctc 1406
            ||||||||||||||||||||||||||
Sbjct: 1381 ttcagtttatcaattttattcttctc 1406


>Contig-U04139-1 (Contig-U04139-1Q) /CSM_Contig/Contig-U04139-1Q.Seq.d
          Length = 631

 Score =  513 bits (259), Expect = e-145
 Identities = 270/275 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaggttcattcccagttgatcatgttgaaattttattatntgatgtaccaccaccacaac 60
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 157 aaggttcattcccagttgatcatgttgaaattttattatctgatgtaccaccaccacaac 216

                                                                       
Query: 61  cagttcatccagttgctactttatcacccccaatgtcaccaactattccaaacattacaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 cagttcatccagttgctactttatcacccccaatgtcaccaactattccaaacattacaa 276

                                                                       
Query: 121 atactccaccaccaccaccatcaattagtgattcaatgtcaccaccaccacaagttggta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 atactccaccaccaccaccatcaattagtgattcaatgtcaccaccaccacaagttggta 336

                                                                       
Query: 181 tgttaccaccaccacctccaccatcagttatgggttcgaccaaaccaattgaaattccat 240
           |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 337 tgttaccaccaccaccnccaccatcagttatgggttcgnccaaaccaattgaaattccnt 396

                                              
Query: 241 cattaggtattccaccaccaccaccatcatcatca 275
           ||||||||||||||||||||| |||||||||||||
Sbjct: 397 cattaggtattccaccaccacaaccatcatcatca 431


 Score = 34.2 bits (17), Expect = 0.40
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                
Query: 318 ggtattccaccaccaccacca 338
           |||||||||||||||| ||||
Sbjct: 402 ggtattccaccaccacaacca 422


 Score = 32.2 bits (16), Expect = 1.6
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                               
Query: 382 ctccaccaccactaccatca 401
           |||||||||||| |||||||
Sbjct: 280 ctccaccaccaccaccatca 299


 Score = 32.2 bits (16), Expect = 1.6
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 323 tccaccaccaccacca 338
           ||||||||||||||||
Sbjct: 281 tccaccaccaccacca 296


 Score = 30.2 bits (15), Expect = 6.3
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                              
Query: 383 tccaccaccactaccatca 401
           ||||||||||| |||||||
Sbjct: 407 tccaccaccacaaccatca 425


>Contig-U14441-1 (Contig-U14441-1Q) /CSM_Contig/Contig-U14441-1Q.Seq.d
          Length = 927

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 252 ccaccaccaccaccatcatcatca 275
           ||||||||||||||||||||||||
Sbjct: 205 ccaccaccaccaccatcatcatca 228


 Score = 36.2 bits (18), Expect = 0.10
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                     
Query: 181 tgttaccaccaccacctccaccatca 206
           |||||||||||||||| ||| |||||
Sbjct: 200 tgttaccaccaccaccaccatcatca 225


 Score = 36.2 bits (18), Expect = 0.10
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 254 accaccaccaccatcatcatca 275
           ||||||||||||| ||||||||
Sbjct: 204 accaccaccaccaccatcatca 225


 Score = 36.2 bits (18), Expect = 0.10
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 126 ccaccaccaccaccatca 143
           ||||||||||||||||||
Sbjct: 205 ccaccaccaccaccatca 222


 Score = 30.2 bits (15), Expect = 6.3
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 324 ccaccaccaccacca 338
           |||||||||||||||
Sbjct: 205 ccaccaccaccacca 219


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 30,507
Number of Sequences: 6905
Number of extensions: 30507
Number of successful extensions: 5646
Number of sequences better than 10.0: 577
length of query: 1438
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1422
effective length of database: 5,564,391
effective search space: 7912564002
effective search space used: 7912564002
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.30
Homology vs DNA 
Query= Contig-U12422-1 (Contig-U12422-1Q) /CSM_Contig/Contig-U12422-1Q.Seq.d
         (1438 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(U83089) Dictyostelium discoideum MyoI (myoI) mRNA, partial ...   745   0.0    5
(L35321) Dictyostelium discoideum class VII unconventional m...   745   0.0    5
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...   745   0.0    5
(BJ436549) Dictyostelium discoideum cDNA clone:ddv31c13, 3' ...   745   0.0    5
(BJ438115) Dictyostelium discoideum cDNA clone:ddv36l12, 3' ...   918   0.0    2
(BJ442838) Dictyostelium discoideum cDNA clone:ddv51j03, 3' ...   351   0.0    3
(BJ441452) Dictyostelium discoideum cDNA clone:ddv46b22, 3' ...   428   0.0    4
(AU061886) Dictyostelium discoideum slug cDNA, clone SLG482.      309   e-112  2
(BJ419536) Dictyostelium discoideum cDNA clone:ddv36l12, 5' ...   339   2e-88  2
(AU039812) Dictyostelium discoideum slug cDNA, clone SLG482.      119   4e-26  2
(CC817914) 1O0004A03F Oxytricha plasmid UUGC1O library Sterk...    48   5e-10  4
(AZ583039) 1M0376E14R Mouse 10kb plasmid UUGC1M library Mus ...    48   2e-08  4
(BZ241111) CH230-324L22.TV CHORI-230 Segment 2 Rattus norveg...    48   3e-08  4
(AX647437) Sequence 1629 from Patent EP1270724.                    46   6e-08  4
(DW046515) CLLX13227.b1_F19.ab1 CLL(XYZ) lettuce saligna Lac...    48   8e-08  4
(DW046933) CLLX13616.b1_P19.ab1 CLL(XYZ) lettuce saligna Lac...    48   9e-08  4
(CE480293) tigr-gss-dog-17000364769283 Dog Library Canis lup...    42   3e-07  4
(DH676955) Rattus norvegicus DNA, BAC clone: RNB1-228M22, 3'...    48   3e-07  3
(DY925978) CHAY9495.b1_M22.ab1 CHA(XYZ) common wild sunflowe...    42   4e-07  3
(DY929347) CHAZ4419.b1_E02.ab1 CHA(XYZ) common wild sunflowe...    42   5e-07  3
(AL184136) Tetraodon nigroviridis genome survey sequence T7 ...    48   6e-07  3
(BZ164233) CH230-246O13.TJB CHORI-230 Segment 2 Rattus norve...    50   6e-07  3
(DY920512) CHAY3894.b1_K13.ab1 CHA(XYZ) common wild sunflowe...    42   6e-07  3
(DY914884) CHAY10775.b1_M05.ab1 CHA(XYZ) common wild sunflow...    42   6e-07  3
(DH777501) Rattus norvegicus DNA, BAC clone: RNB1-364J13, 5'...    48   6e-07  3
(DH601795) Rattus norvegicus DNA, BAC clone: RNB1-127P07, 5'...    42   8e-07  4
(CA319780) UI-M-FW0-cca-b-02-0-UI.r1 NIH_BMAP_FW0 Mus muscul...    48   9e-07  4
(DH562830) Rattus norvegicus DNA, BAC clone: RNB1-075H17, 5'...    42   1e-06  4
(DW046635) CLLX13338.b1_C24.ab1 CLL(XYZ) lettuce saligna Lac...    48   1e-06  4
(BH336507) CH230-169E2.TJ CHORI-230 Segment 1 Rattus norvegi...    48   1e-06  3
(DH819890) Rattus norvegicus DNA, BAC clone: RNB1-423F22, 5'...    48   1e-06  3
(EL513628) CHUY396.b1_G03.ab1 CHU(XYZ) puzzle sunflower Heli...    42   1e-06  4
(EL513966) CHUY737.b1_B18.ab1 CHU(XYZ) puzzle sunflower Heli...    42   1e-06  4
(DH772441) Rattus norvegicus DNA, BAC clone: RNB1-357N11, 5'...    48   1e-06  4
(AB149729) Homo sapiens DNA, STS on chromosome 12, D12S0713i...    32   2e-06  5
(DJ466672) Method for analysing genome using microsatellite ...    32   2e-06  5
(AB018490) Homo sapiens DNA, trinucleotide repeats region.         46   2e-06  4
(CQ342167) Sequence 16261 from Patent WO0157275.                   42   2e-06  4
(CQ304933) Sequence 16038 from Patent WO0186003.                   42   2e-06  4
(CQ267909) Sequence 16170 from Patent WO0157277.                   42   2e-06  4
(CQ229773) Sequence 16612 from Patent WO0157273.                   42   2e-06  4
(CQ206364) Sequence 8641 from Patent WO0157271.                    42   2e-06  4
(CQ181991) Sequence 13387 from Patent WO0157274.                   42   2e-06  4
(CQ146551) Sequence 16573 from Patent WO0157276.                   42   2e-06  4
(CQ107909) Sequence 16768 from Patent WO0157272.                   42   2e-06  4
(CQ076913) Sequence 12713 from Patent WO0157278.                   42   2e-06  4
(CQ057625) Sequence 8445 from Patent WO0157270.                    42   2e-06  4
(CQ341185) Sequence 15279 from Patent WO0157275.                   42   2e-06  4
(CQ303869) Sequence 14974 from Patent WO0186003.                   42   2e-06  4
(CQ266896) Sequence 15157 from Patent WO0157277.                   42   2e-06  4
(CQ228754) Sequence 15593 from Patent WO0157273.                   42   2e-06  4
(CQ205355) Sequence 7632 from Patent WO0157271.                    42   2e-06  4
(CQ180991) Sequence 12387 from Patent WO0157274.                   42   2e-06  4
(CQ145546) Sequence 15568 from Patent WO0157276.                   42   2e-06  4
(CQ106891) Sequence 15750 from Patent WO0157272.                   42   2e-06  4
(CQ075914) Sequence 11714 from Patent WO0157278.                   42   2e-06  4
(CQ056637) Sequence 7457 from Patent WO0157270.                    42   2e-06  4
(CB791427) AMGNNUC:YRHD1-00002-C3-A rat hypothalamus (10527)...    52   2e-06  3
(AJ403997) Hyla arborea microsatellite DNA, clone WHA5-29.         36   2e-06  5
(CQ329411) Sequence 3505 from Patent WO0157275.                    42   3e-06  4
(CQ292390) Sequence 3495 from Patent WO0186003.                    42   3e-06  4
(CQ255305) Sequence 3566 from Patent WO0157277.                    42   3e-06  4
(CQ216736) Sequence 3575 from Patent WO0157273.                    42   3e-06  4
(CQ201223) Sequence 3500 from Patent WO0157271.                    42   3e-06  4
(CQ172075) Sequence 3471 from Patent WO0157274.                    42   3e-06  4
(CQ133505) Sequence 3527 from Patent WO0157276.                    42   3e-06  4
(CQ094745) Sequence 3604 from Patent WO0157272.                    42   3e-06  4
(CQ067689) Sequence 3489 from Patent WO0157278.                    42   3e-06  4
(CQ052617) Sequence 3437 from Patent WO0157270.                    42   3e-06  4
(BZ115869) CH230-255D7.TVB CHORI-230 Segment 2 Rattus norveg...    42   3e-06  4
(AZ840062) 2M0136M19F Mouse 10kb plasmid UUGC1M library Mus ...    40   3e-06  4
(ET061261) MUGQ_CH252P357J11Sp6_CP670_040 CHORI-252 Vervet M...    42   4e-06  4
(CQ328471) Sequence 2565 from Patent WO0157275.                    42   4e-06  4
(CQ291368) Sequence 2473 from Patent WO0186003.                    42   4e-06  4
(CQ254334) Sequence 2595 from Patent WO0157277.                    42   4e-06  4
(CQ215756) Sequence 2595 from Patent WO0157273.                    42   4e-06  4
(CQ200252) Sequence 2529 from Patent WO0157271.                    42   4e-06  4
(CQ171117) Sequence 2513 from Patent WO0157274.                    42   4e-06  4
(CQ132545) Sequence 2567 from Patent WO0157276.                    42   4e-06  4
(CQ093768) Sequence 2627 from Patent WO0157272.                    42   4e-06  4
(CQ066726) Sequence 2526 from Patent WO0157278.                    42   4e-06  4
(CQ051669) Sequence 2489 from Patent WO0157270.                    42   4e-06  4
(BZ254273) CH230-402H7.TV CHORI-230 Segment 2 Rattus norvegi...    48   5e-06  3
(BZ243402) CH230-419C24.TJ CHORI-230 Segment 2 Rattus norveg...    40   6e-06  4
(BZ215927) CH230-250M23.TV CHORI-230 Segment 2 Rattus norveg...    48   6e-06  3
(DH778948) Rattus norvegicus DNA, BAC clone: RNB1-366I19, 5'...    48   6e-06  3
(DH521845) Rattus norvegicus DNA, BAC clone: RNB1-019I20, 5'...    42   6e-06  4
(AA776664) ae79h06.s1 Stratagene schizo brain S11 Homo sapie...    40   7e-06  3
(DE215482) Trifolium pratense DNA, clone:RCG04183.                 34   9e-06  4
(BZ223258) CH230-496O4.TVB CHORI-230 Segment 2 Rattus norveg...    44   1e-05  3
(AQ927406) RPCI-23-261L19.TV RPCI-23 Mus musculus genomic cl...    42   1e-05  3
(AQ759124) HS_2249_B2_H02_T7C CIT Approved Human Genomic Spe...    42   1e-05  3
(BZ144309) CH230-462F7.TJ CHORI-230 Segment 2 Rattus norvegi...    48   1e-05  3
(BJ424013) Dictyostelium discoideum cDNA clone:ddv51j03, 5' ...    48   1e-05  3
(EL513533) CHUX637.b1_I16.ab1 CHU(XYZ) puzzle sunflower Heli...    42   1e-05  3
(AC105589) Rattus norvegicus clone CH230-242B2, *** SEQUENCI...    50   1e-05  2
(AC125857) Rattus norvegicus clone CH230-421M5, *** SEQUENCI...    50   1e-05  2
(BZ177213) CH230-506K8.TVB CHORI-230 Segment 2 Rattus norveg...    36   2e-05  4
(DH633832) Rattus norvegicus DNA, BAC clone: RNB1-170P01, 3'...    46   2e-05  3
(AG288900) Mus musculus molossinus DNA, clone:MSMg01-063B05....    48   2e-05  3

>(U83089) Dictyostelium discoideum MyoI (myoI) mRNA, partial cds.
          Length = 1800

 Score =  745 bits (376), Expect(5) = 0.0
 Identities = 376/376 (100%)
 Strand = Plus / Plus


Query: 1031 aatataaaggtttggatctcaatgattgaatctcaaatctttgaattggtctctcaaacc 1090
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1357 aatataaaggtttggatctcaatgattgaatctcaaatctttgaattggtctctcaaacc 1416


Query: 1091 ccagaatacttgaaattgatgtttatcaatttaattggttcaaaatcaccattattcggt 1150
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1417 ccagaatacttgaaattgatgtttatcaatttaattggttcaaaatcaccattattcggt 1476


Query: 1151 tgtacattatttaacattcaacaaaaagaaaatccaccaaaagcttggttggccatcaac 1210
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1477 tgtacattatttaacattcaacaaaaagaaaatccaccaaaagcttggttggccatcaac 1536


Query: 1211 aaaaaaggtgtttccattttcgatccacacactaaagaatctaaaaacttttggactttc 1270
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1537 aaaaaaggtgtttccattttcgatccacacactaaagaatctaaaaacttttggactttc 1596


Query: 1271 caatcaatctcaaatgtcgctttcactgatgacactttttgtattatgactggtaattta 1330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1597 caatcaatctcaaatgtcgctttcactgatgacactttttgtattatgactggtaattta 1656


Query: 1331 atgaaaccaattaaacaaacctttacaactgatgaacattcttcaattgcttcagtttat 1390
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1657 atgaaaccaattaaacaaacctttacaactgatgaacattcttcaattgcttcagtttat 1716


Query: 1391 caattttattcttctc 1406
            ||||||||||||||||
Sbjct: 1717 caattttattcttctc 1732

 Score =  456 bits (230), Expect(5) = 0.0
 Identities = 230/230 (100%)
 Strand = Plus / Plus


Query: 651  cagtcaatgaaaccgcaggtattagtaaagtggtatccgagaccgatatgatttacgatg 710
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983  cagtcaatgaaaccgcaggtattagtaaagtggtatccgagaccgatatgatttacgatg 1042


Query: 711  ttttggctcgttgggaacaaagtgaagaaaagggtgaattctatttccaagttcgtcgta 770
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1043 ttttggctcgttgggaacaaagtgaagaaaagggtgaattctatttccaagttcgtcgta 1102


Query: 771  gattcttcttggatgatgtaaataaaattttggatcaagagcatctttggactgatgatg 830
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1103 gattcttcttggatgatgtaaataaaattttggatcaagagcatctttggactgatgatg 1162


Query: 831  atatttgtttcgagttaacctattgtcaaattcgtgatgaatggatgaaa 880
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1163 atatttgtttcgagttaacctattgtcaaattcgtgatgaatggatgaaa 1212

 Score =  133 bits (67), Expect(5) = 0.0
 Identities = 67/67 (100%)
 Strand = Plus / Plus


Query: 947  ttatatccaaatcaatccaaattggttttaaccaaagaggttgttcgtcaagttttacct 1006
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1276 ttatatccaaatcaatccaaattggttttaaccaaagaggttgttcgtcaagttttacct 1335


Query: 1007 gatcaaa 1013
            |||||||
Sbjct: 1336 gatcaaa 1342

 Score =  107 bits (54), Expect(5) = 0.0
 Identities = 54/54 (100%)
 Strand = Plus / Plus


Query: 894  aaatgtcaatgagaaagattcatcgattattgccgcaatcttaattcaattgtt 947
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1224 aaatgtcaatgagaaagattcatcgattattgccgcaatcttaattcaattgtt 1277

 Score = 34.2 bits (17), Expect(5) = 0.0
 Identities = 17/17 (100%)
 Strand = Plus / Plus


Query: 879  aaaggtttatacacaaa 895
            |||||||||||||||||
Sbjct: 1210 aaaggtttatacacaaa 1226

 Score =  327 bits (165), Expect(4) = 9e-92
 Identities = 169/171 (98%)
 Strand = Plus / Plus


Query: 454 actttagatcatcattaagagtatcaatgcttaatacatcaaatgatggtggtgataata 513
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 actttagatcatcattaagagtatcaatgcttaatacatcaaatgatggtggtgataata 169


Query: 514 gttctgatgatccatcaaagagattaacagtttcgccagccattggtaccgatagtcaat 573
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 gttctgatgatccatcaaagagattaacagtttcgccagccattggtaccgatagtcaat 229


Query: 574 nggcanaatgggcatcaactcgtttccgttcattcaagagagcatcaacat 624
            |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 tggcacaatgggcatcaactcgtttccgttcattcaagagagcatcaacat 280

 Score = 48.1 bits (24), Expect(4) = 9e-92
 Identities = 24/24 (100%)
 Strand = Plus / Plus


Query: 354 tcattgtcaaacagtggtaatagt 377
           ||||||||||||||||||||||||
Sbjct: 10  tcattgtcaaacagtggtaatagt 33

 Score = 28.2 bits (14), Expect(4) = 9e-92
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 626 aatcaacaacaagc 639
           ||||||||||||||
Sbjct: 283 aatcaacaacaagc 296

 Score = 26.3 bits (13), Expect(4) = 9e-92
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 1012 aaattttgaactc 1024
            |||||||||||||
Sbjct: 1340 aaattttgaactc 1352

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,508,826,973
Number of extensions: 99248283
Number of successful extensions: 10869884
Number of sequences better than 10.0: 12091
Length of query: 1438
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1414
Effective length of database: 97,308,875,965
Effective search space: 137594750614510
Effective search space used: 137594750614510
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7. 3
Homology vs Protein 
Query= Contig-U12422-1 (Contig-U12422-1Q) /CSM_Contig/Contig-U12422-1Q.Seq.d
         (1438 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q9U1M8) RecName: Full=Myosin-I heavy chain; AltName: Full=Class...   447   e-124
AC116957_47(AC116957|pid:none) Dictyostelium discoideum chromoso...   447   e-124
AJ404002_1(AJ404002|pid:none) Danio rerio mRNA for myosin VIIA (...    59   3e-07
AJ404001_1(AJ404001|pid:none) Danio rerio mRNA for myosin VIIA (...    59   3e-07
BC163570_1(BC163570|pid:none) Danio rerio myosin VIIa, mRNA (cDN...    59   3e-07
BC156494_1(BC156494|pid:none) Synthetic construct Mus musculus c...    59   6e-07
AY821854_1(AY821854|pid:none) Mus musculus myosin VIIa isoform 2...    59   6e-07
AY821853_1(AY821853|pid:none) Mus musculus myosin VIIa isoform 1...    59   6e-07
AB290181_1(AB290181|pid:none) Homo sapiens mRNA for MYO7A varian...    58   8e-07
AB091825_1(AB091825|pid:none) Rattus norvegicus mRNA for myosin ...    58   8e-07
BC172349_1(BC172349|pid:none) Synthetic construct Homo sapiens c...    57   2e-06
AE014298_1594(AE014298|pid:none) Drosophila melanogaster chromos...    49   5e-04
AY069438_1(AY069438|pid:none) Drosophila melanogaster LD14917 fu...    48   0.001
BT011332_1(BT011332|pid:none) Drosophila melanogaster SD18415 fu...    48   0.001
(Q9V3Z6) RecName: Full=Myosin-VIIa;          Short=DmVIIa; AltNa...    48   0.001
AB290182_1(AB290182|pid:none) Homo sapiens mRNA for MYO7B varian...    44   0.019
BC035615_1(BC035615|pid:none) Homo sapiens myosin VIIB, mRNA (cD...    44   0.019
BC138338_1(BC138338|pid:none) Mus musculus myosin VIIB, mRNA (cD...    43   0.033
(Q99MZ6) RecName: Full=Myosin-VIIb;                                    43   0.033
AF242411_1(AF242411|pid:none) Mus musculus myosin-VIIb mRNA, com...    43   0.033
AK220152_1(AK220152|pid:none) Mus musculus mRNA for mFLJ00256 pr...    43   0.033
BC026416_1(BC026416|pid:none) Mus musculus myosin VIIB, mRNA (cD...    43   0.033
AK052692_1(AK052692|pid:none) Mus musculus 0 day neonate kidney ...    42   0.056
A59233(A59233) myosin VII-like protein - fruit fly (Drosophila m...    38   0.81
AE014134_1365(AE014134|pid:none) Drosophila melanogaster chromos...    38   0.81
BC014159_1(BC014159|pid:none) Homo sapiens pleckstrin homology d...    37   1.4
AK293950_1(AK293950|pid:none) Homo sapiens cDNA FLJ55536 complet...    37   1.4
AK124787_1(AK124787|pid:none) Homo sapiens cDNA FLJ42797 fis, cl...    37   1.4
AK295896_1(AK295896|pid:none) Homo sapiens cDNA FLJ56902 complet...    37   1.4
(Q24564) RecName: Full=Moesin/ezrin/radixin homolog 2; AltName: ...    35   5.2
CP000806_4078(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu...    35   8.9
BC090550_1(BC090550|pid:none) Danio rerio pleckstrin homology do...    35   8.9

>(Q9U1M8) RecName: Full=Myosin-I heavy chain; AltName: Full=Class VII
            unconventional myosin; AltName: Full=DdMVII;
            Short=DdM7;  &A59249(A59249) &L35321_1(L35321|pid:none)
          Length = 2357

 Score =  447 bits (1151), Expect = e-124
 Identities = 226/253 (89%), Positives = 230/253 (90%)
 Frame = +2

Query: 650  AVNETAGISKVVSETDMIYDVLARWEQSEEKGEFYFQVRRRFFLDDVNKILDQEHLWTDD 829
            AVNETAGISKVVSETDMIYDVLARWEQSEEKGEFYFQVRRRFFLDDVNKILDQEHLWTDD
Sbjct: 2107 AVNETAGISKVVSETDMIYDVLARWEQSEEKGEFYFQVRRRFFLDDVNKILDQEHLWTDD 2166

Query: 830  DICFELTYCQIRDEWMKRFIHKMSMRKIHRLLPQS*FNCLYPNQSKLVLTKEVVRQVLPD 1009
            DICFELTYCQIRDEWMK     ++  K   ++       LYPNQSKLVLTKEVVRQVLPD
Sbjct: 2167 DICFELTYCQIRDEWMKGLYTNVN-EKDSSIIAAILIQLLYPNQSKLVLTKEVVRQVLPD 2225

Query: 1010 QNFELLHNIKVWISMIESQIFELVSQTPEYLKLMFINLIGSKSPLFGCTLFNIQQKENPP 1189
            Q      NIKVWISMIESQIFELVSQTPEYLKLMFINLIGSKSPLFGCTLFNIQQKENPP
Sbjct: 2226 QILNS-QNIKVWISMIESQIFELVSQTPEYLKLMFINLIGSKSPLFGCTLFNIQQKENPP 2284

Query: 1190 KAWLAINKKGVSIFDPHTKESKNFWTFQSISNVAFTDDTFCIMTGNLMKPIKQTFTTDEH 1369
            KAWLAINKKGVSIFDPHTKESKNFWTFQSISNVAFTDDTFCIMTGNLMKPIKQTFTTDEH
Sbjct: 2285 KAWLAINKKGVSIFDPHTKESKNFWTFQSISNVAFTDDTFCIMTGNLMKPIKQTFTTDEH 2344

Query: 1370 SSIASVYQFYSSQ 1408
            SSIASVYQFYSSQ
Sbjct: 2345 SSIASVYQFYSSQ 2357

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 49/112 (43%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
 Frame = +3

Query: 456  FRSSLRVSMLNTXXXXXXXXXXXXXKRLTVSPAIGTDSQXAXWASTRFRSFKRASTXINN 635
            FRSSLRVSMLNT             KRLTVSPAIGTDSQ A WASTRFRSFKRAST
Sbjct: 1817 FRSSLRVSMLNTSNDGGDNSSDDPSKRLTVSPAIGTDSQLAQWASTRFRSFKRASTLNQQ 1876

Query: 636  KXXXXQS--MKPQVLVKWYPRPI*FTMFWLVGNKVKKRVNSISKFVVDSSWM 785
            +    +   + P     +   PI  ++  +     KK + + S+ ++   WM
Sbjct: 1877 QATLKRKAPVDPNTAFYFNKDPIKESLIEMEAKLSKKAIKNFSEIMM---WM 1925

 Score = 40.0 bits (92), Expect = 0.21
 Identities = 54/280 (19%), Positives = 110/280 (39%), Gaps = 23/280 (8%)
 Frame = +2

Query: 626  NQQQAXXXAVNETAGISKVVSETDMIYDVLARWEQ------SEEKGEFYFQVRRRFFLDD 787
            N ++     +    GI + ++ TD + DVL++ E       S+ +  F F  +++ F D+
Sbjct: 1356 NSKENGFTIIESFNGIERDIAPTDKLCDVLSKVENLQATLSSKIQVNFKFVFKKKLFFDN 1415

Query: 788  VNKILDQEHLWTDDDI--------CFELTYCQIRDEWMKRFIHKMSMRKIHRLLPQS*FN 943
            +   +    +  +++          F   YC+ +D       +++S+  +      S +
Sbjct: 1416 ITNNVPTTSINVENEFYYHQLFNDLFNSNYCKDQD-------YQISIGSLKLQFESSDYT 1468

Query: 944  CLYPNQSKLVLTKEVVRQVLPDQNFELLHNIKVWISMIESQIFELVSQ---TPEYLKLMF 1114
                         + +R  LP           +  +  +  I +  S    +PE  K
Sbjct: 1469 -------------DEIRAWLPGNGRGKYFTTDIEKNRFDDFINKYKSHKGLSPEDAKKQM 1515

Query: 1115 INLIGSKSPLFGCTLFNIQQKEN----PPKAWLAINKKGVSIFDPHTKESKNF--WTFQS 1276
            + L+  K PL  C+L   + +      P    LA+N  G++I+DP T +      ++ QS
Sbjct: 1516 VQLL-EKHPLANCSLVVCEHQSESLPYPKNFVLALNVNGINIYDPATSKMLESVKYSNQS 1574

Query: 1277 ISNVAFTDDTFCIMTGNLMKPIKQTFTTDEHSSIASVYQF 1396
              N+   D +  I+  N  K   Q FT D    ++ + ++
Sbjct: 1575 QQNLKSDDKSVSIILEN--KSTLQAFTGDVQKLVSLIKEY 1612

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,792,657,914
Number of extensions: 32372281
Number of successful extensions: 73000
Number of sequences better than 10.0: 32
Number of HSP's gapped: 72963
Number of HSP's successfully gapped: 36
Length of query: 479
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 347
Effective length of database: 623,955,076
Effective search space: 216512411372
Effective search space used: 216512411372
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.75  gvh: 0.43  alm: 0.50  top: 0.53  tms: 0.00  mit: 0.19  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 24.0 %: nuclear
	 12.0 %: cytoskeletal
	 12.0 %: mitochondrial
	  4.0 %: vacuolar
	  4.0 %: endoplasmic reticulum

>> prediction for Contig-U12422-1 is cyt
VS (DIR, S) 0
VH (FL, L) 4
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0