Contig-U12409-1
Contig ID Contig-U12409-1
Contig update 2002.12.18
Contig sequence
>Contig-U12409-1 (Contig-U12409-1Q) /CSM_Contig/Contig-U12409-1Q.Seq.d
GATATGCAATATATTGCAGATGTTAGTGGTGAAAGAGGTAGTTCATCAAA
TCAAAAGGTAGAACATGTTAAATCAATCATTTTAGAGACTAATCCATTGT
TGGAAGCATTTGGTAATGCTAAAACTCTTCGTAATAATAATTCTTCACGT
TTCGGTAAATACTTTGAAATTCAATTCAATCAAAAAAATGAACCAGAGGG
TGGTAAAATCACAAATTACCTCTTGGAGAAATCTCGTGTAGTTTTCCAAT
TGAAGAGTGAACGTAATTTCCACATTTTCTATCAATTCTGTAGAGGTGCA
ACTCCACAAGAACAACAAGAGTTTGGTATCTATGGTCCAGAGAATTTCGC
TTATCTAACCAAAGGTGATACTTTAGATATTGATGGTGTTGATGATGTTG
AANAATTTGCTCTCACTCGTAATGCTATGAATGTTATTGGTATTCCAGCA
AATGAACAAAAACAAATCTTCAAATTATTAGCTGCTATCCTTTGGATTGG
TAATATTGATTTTAAAGAACAAGCTGGTGATAAAGTTACAATTGCTGATA
CATCTGTATTGGATTTTGTATCACAATTATTAGATGTACCAAGTCATTTT
TTAAAAACAGCATTAGAATTTAGACAAATGGAAACTAGACATGGTAATCA
AAGAGGTACACAATATAATGTACCATTGAATAAGACACAAGCAATTGCAG
GTAGAGATGCATTAGCAAAAGCAATTTATGATCGTTTATTCAATTGGTTA
GTTGATCGTATCAATAAGGAGATGGATAATCCACAAAAAGGTTTAATGAT
TGGTGTATTGGATATTTATGGATTTGAAGTTTTCGATAGAAATGGATTTG
AACAATTTTGTATCAACTATGTCAATGAAAAGTTACAACAAATCTTCATC
GAGTTTACATTAAAGATGGAACAAGAAGAGTATGTTCGTGAAGGTATTAA
ATGGGAGCCAATTCCATTCTTTGATAATAAGATTGTATGTGAATTGATTG
AAGGTAAGAATCCACCAGGTATTTTCAGTATTTTAGATGATGTTTGTCGT
GCAGTTCATTCACAAGCCGAAGGTGCCGATCAAAAGTTACTTCAATCCAT
TGCCGTTTGTAAATCAAATCCACATTTCGATACTCGTGGTAATGCATTCT
GTGTTAAACATTATGCAGGTGATGTAGTTTATGAAGGTCCAGGTATGATT
GAAAAGAATAAAGATACTCTTCTCAAAGATCATTTGGAGATTCTTCAAAT
GTCAGCAAACAATTTCTTGGTTGGTCTTTTCCCAGATGTCATCGATACCG
ACTCTAAAAAGTTACCATCAACAGCTGGTTTCAAAATTAAATCACAAGCA
GCAGAATTGGTTGCCACTTTAATGAAATCAACACCTCACTACATTAGAAC
CATCAAACCAAATGATCTTAAAAAACCAAATATTTTAGAAGGTGGTCGTG
TACTTCATCAAGTTAAATATTTGGGTCTATTGGATAACATTAAAGTTAGA
AGAGCAGGTTTTGCCTACAGAGCAACCTTTGATAGATTCTTCCAAAGATA
TTATCTCCTCTCTGATAAAACTTGTTACGCTGGTAATAACATTTGGAAAG
GTGATGCTCTCTCTGCGTGCCGTG----------NNNNNNNNNNAGGATG
AAATGCATAAAGAAATTTTCNTCAAAAAGAATCAATTCCATATTGCTTCA
GGTTTACCAGCTTCAACTACCGTTGCCAAAGTTAGAAAAAATCCAAGTCA
AGTTTCAACTCCTTCAAAACCAATTGCTAAACCAGTCGCTAAACCAATGG
TAGCTAAACCATCTGGTGGTTCTGTAATTATGAAGAAACCAGCACCAGCT
GCTCCACCATCAGGTCCACCAGTCATGAAAAAACCAGCACCAACTGCTCC
AGGTGGCGCTCCAATGATGAAAAAACCAGCACCAGCTCCAGGTGGTGCTC
CAATGATGAAAAAACCAGCACCAGTTCCAGGTGGTCCAGCTCCAGGTGGT
TCTGCAATTATGAAACCAGCAGGCGGAGTTTCTAAACCATTACCATCACC
AACTGGTGCCCCAATGATGAAGAAACCAGCTCCACCACCTCAACAATATA
TCGCTCTTTACGAGTACGACGCTATGCAACCAGATGAATTAACTTTCAAA
GAAAATGATGTCATCAATTTAATTAAAAAAGTAGATGCTGATTGGTGGCA
AGGTGAATTAGTTAGAACTAAACAAATTGGTATGTTACCTTCAAATTATG
TTCAACAAATTTAAAATCAAATAAAAT

Gap gap included
Contig length 2267
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 7048029
End point 7050287
Strand (PLUS/MINUS) PLUS
Number of clones 8
Number of EST 9
Link to clone list U12409
List of clone(s)

est1=VHO206F,1,579
est2=VHA245F,418,1053
est3=VHN821F,448,1006
est4=SHG368F,516,1177
est5=VHC188F,712,1346
est6=AHF290F,713,1347
est7=VHB126F,720,1347
est8=VFI821F,1068,1624
est9=VHC188Z,1625,2258
Translated Amino Acid sequence
DMQYIADVSGERGSSSNQKVEHVKSIILETNPLLEAFGNAKTLRNNNSSRFGKYFEIQFN
QKNEPEGGKITNYLLEKSRVVFQLKSERNFHIFYQFCRGATPQEQQEFGIYGPENFAYLT
KGDTLDIDGVDDVEXFALTRNAMNVIGIPANEQKQIFKLLAAILWIGNIDFKEQAGDKVT
IADTSVLDFVSQLLDVPSHFLKTALEFRQMETRHGNQRGTQYNVPLNKTQAIAGRDALAK
AIYDRLFNWLVDRINKEMDNPQKGLMIGVLDIYGFEVFDRNGFEQFCINYVNEKLQQIFI
EFTLKMEQEEYVREGIKWEPIPFFDNKIVCELIEGKNPPGIFSILDDVCRAVHSQAEGAD
QKLLQSIAVCKSNPHFDTRGNAFCVKHYAGDVVYEGPGMIEKNKDTLLKDHLEILQMSAN
NFLVGLFPDVIDTDSKKLPSTAGFKIKSQAAELVATLMKSTPHYIRTIKPNDLKKPNILE
GGRVLHQVKYLGLLDNIKVRRAGFAYRATFDRFFQRYYLLSDKTCYAGNNIWKGDALSAC
R---

---XXXXDEMHKEIFXKKNQFHIASGLPASTTVAKVRKNPSQVSTPSKPIAKPVAKPMVA
KPSGGSVIMKKPAPAAPPSGPPVMKKPAPTAPGGAPMMKKPAPAPGGAPMMKKPAPVPGG
PAPGGSAIMKPAGGVSKPLPSPTGAPMMKKPAPPPQQYIALYEYDAMQPDELTFKENDVI
NLIKKVDADWWQGELVRTKQIGMLPSNYVQQI*nqik


Translated Amino Acid sequence (All Frames)
Frame A:
DMQYIADVSGERGSSSNQKVEHVKSIILETNPLLEAFGNAKTLRNNNSSRFGKYFEIQFN
QKNEPEGGKITNYLLEKSRVVFQLKSERNFHIFYQFCRGATPQEQQEFGIYGPENFAYLT
KGDTLDIDGVDDVEXFALTRNAMNVIGIPANEQKQIFKLLAAILWIGNIDFKEQAGDKVT
IADTSVLDFVSQLLDVPSHFLKTALEFRQMETRHGNQRGTQYNVPLNKTQAIAGRDALAK
AIYDRLFNWLVDRINKEMDNPQKGLMIGVLDIYGFEVFDRNGFEQFCINYVNEKLQQIFI
EFTLKMEQEEYVREGIKWEPIPFFDNKIVCELIEGKNPPGIFSILDDVCRAVHSQAEGAD
QKLLQSIAVCKSNPHFDTRGNAFCVKHYAGDVVYEGPGMIEKNKDTLLKDHLEILQMSAN
NFLVGLFPDVIDTDSKKLPSTAGFKIKSQAAELVATLMKSTPHYIRTIKPNDLKKPNILE
GGRVLHQVKYLGLLDNIKVRRAGFAYRATFDRFFQRYYLLSDKTCYAGNNIWKGDALSAC
R---

---XXXXDEMHKEIFXKKNQFHIASGLPASTTVAKVRKNPSQVSTPSKPIAKPVAKPMVA
KPSGGSVIMKKPAPAAPPSGPPVMKKPAPTAPGGAPMMKKPAPAPGGAPMMKKPAPVPGG
PAPGGSAIMKPAGGVSKPLPSPTGAPMMKKPAPPPQQYIALYEYDAMQPDELTFKENDVI
NLIKKVDADWWQGELVRTKQIGMLPSNYVQQI*nqik

Frame B:
icnilqmlvvkevvhqikr*nmlnqsf*rlihcwkhlvmlklfviiilhvsvntlkfnsi
kkmnqrvvksqitswrnlv*fsn*rvnvistfsinsvevqlhknnkslvsmvqrisli*p
kvil*ilmvlmmlxnllslvml*mllvfqqmnknkssny*llsfglvililknklviklq
llihlywilyhny*myqvif*kqh*nldkwkldmvikevhnimyh*irhkqlqvemh*qk
qfmivysig*livsirrwiihkkv**lvywifmdlkfsiemdlnnfvstmsmksynksss
slh*rwnkksmfvkvlngsqfhsliirlyvn*lkvrihqvfsvf*mmfvvqfihkpkvpi
ksyfnplpfvnqihisilvvmhsvlnimqvm*fmkvqv*lkrikilfskiiwrffkcqqt
iswlvfsqmssiptlksyhqqlvsklnhkqqnwlpl**nqhlttlepsnqmilknqif*k
vvvyfiklniwvywitlkleeqvlpteqplidsskdiissliklvtlvitfgkvmlslra
v---

---xxxrmkcikkfsskrinsillqvyqlqlplpklekiqvkfqllqnqllnqslnqw*l
nhlvvl*l*rnqhqllhhqvhqs*knqhqllqvalq**knqhqlqvvlq**knqhqfqvv
qlqvvlql*nqqaeflnhyhhqlvpq**rnqlhhlnnislftsttlcnqmn*lskkmmss
i*lkk*mliggkvn*lelnklvcylqimfnkfkik*n

Frame C:
yaiycrc*w*kr*fikskgrtc*inhfrd*sivgsiw*c*nss***fftfr*il*nsiqs
kk*trgw*nhklplgeiscsfpiee*t*fphflsil*rcnstrttrvwylwsrefrlsnq
r*yfry*wc**c*xicshs*cyecywyssk*tktnlqiiscypldw*y*f*rtsw**syn
c*yicigfcitiirctksffknsiri*tngn*tw*skryti*ctie*dtsncr*rcisks
nl*sfiqlvs*syq*gdg*stkrfndwcigylwi*sfr*kwi*tilyqlcq*kvttnlhr
vyikdgtrrvcs*ry*mgansil***dcm*id*r*estryfqyfr*clscssftsrrcrs
kvtsihcrl*ikstfrysw*cilc*tlcr*csl*rsryd*ke*ryssqrsfgdssnvskq
flgwsfprchryrl*kvtinswfqn*itssrigchfneintslh*nhqtk*s*ktkyfrr
wsctsss*ifgsig*h*s*ksrfclqsnl**ilpkilspl**nllrw**hler*cslcvp
---

---xxxg*na*rnfxqkesipycfrftsfnyrcqs*kkskssfnsfktnc*tsr*tngs*
tiwwfcnyeetstscstirstshektstncsrwrsndektstssrwcsndektstssrws
ssrwfcnyetsrrsf*tititnwcpndeetssttstiyrslrvrryatr*infqrk*chq
fn*ksrc*lvar*is*n*tnwyvtfklcstnlksnk

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U12409-1 (Contig-U12409-1Q)
/CSM_Contig/Contig-U12409-1Q.Seq.d
(2277 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U12409-1 (Contig-U12409-1Q) /CSM_Contig/Conti... 3172 0.0
Contig-U11224-1 (Contig-U11224-1Q) /CSM_Contig/Conti... 858 0.0
Contig-U12672-1 (Contig-U12672-1Q) /CSM_Contig/Conti... 92 3e-18
Contig-U11160-1 (Contig-U11160-1Q) /CSM_Contig/Conti... 92 3e-18
Contig-U08029-1 (Contig-U08029-1Q) /CSM_Contig/Conti... 40 0.010
Contig-U01624-1 (Contig-U01624-1Q) /CSM_Contig/Conti... 40 0.010
Contig-U14636-1 (Contig-U14636-1Q) /CSM_Contig/Conti... 38 0.041
Contig-U14164-1 (Contig-U14164-1Q) /CSM_Contig/Conti... 38 0.041
Contig-U13238-1 (Contig-U13238-1Q) /CSM_Contig/Conti... 38 0.041
Contig-U11356-1 (Contig-U11356-1Q) /CSM_Contig/Conti... 38 0.041

>Contig-U12409-1 (Contig-U12409-1Q) /CSM_Contig/Contig-U12409-1Q.Seq.d
Length = 2277

Score = 3172 bits (1600), Expect = 0.0
Identities = 1617/1624 (99%)
Strand = Plus / Plus


Query: 1 gatatgcaatatattgcagatgttagtggtgaaagaggtagttcatcaaatcaaaaggta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatatgcaatatattgcagatgttagtggtgaaagaggtagttcatcaaatcaaaaggta 60


Query: 61 gaacatgttaaatcaatcattttagagactaatccattgttggaagcatttggtaatgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaacatgttaaatcaatcattttagagactaatccattgttggaagcatttggtaatgct 120


Query: 121 aaaactcttcgtaataataattcttcacgtttcggtaaatactttgaaattcaattcaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaactcttcgtaataataattcttcacgtttcggtaaatactttgaaattcaattcaat 180


Query: 181 cnnnnnnntgaaccagagggtggtaaaatcacaaattacctcttggagaaatctcgtgta 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caaaaaaatgaaccagagggtggtaaaatcacaaattacctcttggagaaatctcgtgta 240


Query: 241 gttttccaattgaagagtgaacgtaatttccacattttctatcaattctgtagaggtgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gttttccaattgaagagtgaacgtaatttccacattttctatcaattctgtagaggtgca 300


Query: 301 actccacaagaacaacaagagtttggtatctatggtccagagaatttcgcttatctaacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 actccacaagaacaacaagagtttggtatctatggtccagagaatttcgcttatctaacc 360


Query: 361 aaaggtgatactttagatattgatggtgttgatgatgttgaanaatttgctctcactcgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaaggtgatactttagatattgatggtgttgatgatgttgaanaatttgctctcactcgt 420


Query: 421 aatgctatgaatgttattggtattccagcaaatgaacaaaaacaaatcttcaaattatta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aatgctatgaatgttattggtattccagcaaatgaacaaaaacaaatcttcaaattatta 480


Query: 481 gctgctatcctttggattggtaatattgattttaaagaacaagctggtgataaagttaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gctgctatcctttggattggtaatattgattttaaagaacaagctggtgataaagttaca 540


Query: 541 attgctgatacatctgtattggattttgtatcacaattattagatgtaccaagtcatttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 attgctgatacatctgtattggattttgtatcacaattattagatgtaccaagtcatttt 600


Query: 601 ttaaaaacagcattagaatttagacaaatggaaactagacatggtaatcaaagaggtaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttaaaaacagcattagaatttagacaaatggaaactagacatggtaatcaaagaggtaca 660


Query: 661 caatataatgtaccattgaataagacacaagcaattgcaggtagagatgcattagcaaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 caatataatgtaccattgaataagacacaagcaattgcaggtagagatgcattagcaaaa 720


Query: 721 gcaatttatgatcgtttattcaattggttagttgatcgtatcaataaggagatggataat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gcaatttatgatcgtttattcaattggttagttgatcgtatcaataaggagatggataat 780


Query: 781 ccacaaaaaggtttaatgattggtgtattggatatttatggatttgaagttttcgataga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ccacaaaaaggtttaatgattggtgtattggatatttatggatttgaagttttcgataga 840


Query: 841 aatggatttgaacaattttgtatcaactatgtcaatgaaaagttacaacaaatcttcatc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aatggatttgaacaattttgtatcaactatgtcaatgaaaagttacaacaaatcttcatc 900


Query: 901 gagtttacattaaagatggaacaagaagagtatgttcgtgaaggtattaaatgggagcca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gagtttacattaaagatggaacaagaagagtatgttcgtgaaggtattaaatgggagcca 960


Query: 961 attccattctttgataataagattgtatgtgaattgattgaaggtaagaatccaccaggt 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 attccattctttgataataagattgtatgtgaattgattgaaggtaagaatccaccaggt 1020


Query: 1021 attttcagtattttagatgatgtttgtcgtgcagttcattcacaagccgaaggtgccgat 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 attttcagtattttagatgatgtttgtcgtgcagttcattcacaagccgaaggtgccgat 1080


Query: 1081 caaaagttacttcaatccattgccgtttgtaaatcaaatccacatttcgatactcgtggt 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 caaaagttacttcaatccattgccgtttgtaaatcaaatccacatttcgatactcgtggt 1140


Query: 1141 aatgcattctgtgttaaacattatgcaggtgatgtagtttatgaaggtccaggtatgatt 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aatgcattctgtgttaaacattatgcaggtgatgtagtttatgaaggtccaggtatgatt 1200


Query: 1201 gaaaagaataaagatactcttctcaaagatcatttggagattcttcaaatgtcagcaaac 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 gaaaagaataaagatactcttctcaaagatcatttggagattcttcaaatgtcagcaaac 1260


Query: 1261 aatttcttggttggtcttttcccagatgtcatcgataccgactctaaaaagttaccatca 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 aatttcttggttggtcttttcccagatgtcatcgataccgactctaaaaagttaccatca 1320


Query: 1321 acagctggtttcaaaattaaatcacaagcagcagaattggttgccactttaatgaaatca 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 acagctggtttcaaaattaaatcacaagcagcagaattggttgccactttaatgaaatca 1380


Query: 1381 acacctcactacattagaaccatcaaaccaaatgatcttaaaaaaccaaatattttagaa 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 acacctcactacattagaaccatcaaaccaaatgatcttaaaaaaccaaatattttagaa 1440


Query: 1441 ggtggtcgtgtacttcatcaagttaaatatttgggtctattggataacattaaagttaga 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 ggtggtcgtgtacttcatcaagttaaatatttgggtctattggataacattaaagttaga 1500


Query: 1501 agagcaggttttgcctacagagcaacctttgatagattcttccaaagatattatctcctc 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 agagcaggttttgcctacagagcaacctttgatagattcttccaaagatattatctcctc 1560


Query: 1561 tctgataaaacttgttacgctggtaataacatttggaaaggtgatgctctctctgcgtgc 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 tctgataaaacttgttacgctggtaataacatttggaaaggtgatgctctctctgcgtgc 1620


Query: 1621 cgtg 1624
||||
Sbjct: 1621 cgtg 1624


Score = 1249 bits (630), Expect = 0.0
Identities = 633/633 (100%)
Strand = Plus / Plus


Query: 1645 aggatgaaatgcataaagaaattttcntcaaaaagaatcaattccatattgcttcaggtt 1704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1645 aggatgaaatgcataaagaaattttcntcaaaaagaatcaattccatattgcttcaggtt 1704


Query: 1705 taccagcttcaactaccgttgccaaagttagaaaaaatccaagtcaagtttcaactcctt 1764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1705 taccagcttcaactaccgttgccaaagttagaaaaaatccaagtcaagtttcaactcctt 1764


Query: 1765 caaaaccaattgctaaaccagtcgctaaaccaatggtagctaaaccatctggtggttctg 1824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1765 caaaaccaattgctaaaccagtcgctaaaccaatggtagctaaaccatctggtggttctg 1824


Query: 1825 taattatgaagaaaccagcaccagctgctccaccatcaggtccaccagtcatgaaaaaac 1884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1825 taattatgaagaaaccagcaccagctgctccaccatcaggtccaccagtcatgaaaaaac 1884


Query: 1885 cagcaccaactgctccaggtggcgctccaatgatgaaaaaaccagcaccagctccaggtg 1944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1885 cagcaccaactgctccaggtggcgctccaatgatgaaaaaaccagcaccagctccaggtg 1944


Query: 1945 gtgctccaatgatgaaaaaaccagcaccagttccaggtggtccagctccaggtggttctg 2004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1945 gtgctccaatgatgaaaaaaccagcaccagttccaggtggtccagctccaggtggttctg 2004


Query: 2005 caattatgaaaccagcaggcggagtttctaaaccattaccatcaccaactggtgccccaa 2064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2005 caattatgaaaccagcaggcggagtttctaaaccattaccatcaccaactggtgccccaa 2064


Query: 2065 tgatgaagaaaccagctccaccacctcaacaatatatcgctctttacgagtacgacgcta 2124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2065 tgatgaagaaaccagctccaccacctcaacaatatatcgctctttacgagtacgacgcta 2124


Query: 2125 tgcaaccagatgaattaactttcaaagaaaatgatgtcatcaatttaattaaaaaagtag 2184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2125 tgcaaccagatgaattaactttcaaagaaaatgatgtcatcaatttaattaaaaaagtag 2184


Query: 2185 atgctgattggtggcaaggtgaattagttagaactaaacaaattggtatgttaccttcaa 2244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2185 atgctgattggtggcaaggtgaattagttagaactaaacaaattggtatgttaccttcaa 2244


Query: 2245 attatgttcaacaaatttaaaatcaaataaaat 2277
|||||||||||||||||||||||||||||||||
Sbjct: 2245 attatgttcaacaaatttaaaatcaaataaaat 2277


>Contig-U11224-1 (Contig-U11224-1Q) /CSM_Contig/Contig-U11224-1Q.Seq.d
Length = 1492

Score = 858 bits (433), Expect = 0.0
Identities = 438/440 (99%)
Strand = Plus / Plus


Query: 1645 aggatgaaatgcataaagaaattttcntcaaaaagaatcaattccatattgcttcaggtt 1704
|||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 728 aggatgaaatgcataaagaaatcttcctcaaaaagaatcaattccatattgcttcaggtt 787


Query: 1705 taccagcttcaactaccgttgccaaagttagaaaaaatccaagtcaagtttcaactcctt 1764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 taccagcttcaactaccgttgccaaagttagaaaaaatccaagtcaagtttcaactcctt 847


Query: 1765 caaaaccaattgctaaaccagtcgctaaaccaatggtagctaaaccatctggtggttctg 1824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 caaaaccaattgctaaaccagtcgctaaaccaatggtagctaaaccatctggtggttctg 907


Query: 1825 taattatgaagaaaccagcaccagctgctccaccatcaggtccaccagtcatgaaaaaac 1884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 taattatgaagaaaccagcaccagctgctccaccatcaggtccaccagtcatgaaaaaac 967


Query: 1885 cagcaccaactgctccaggtggcgctccaatgatgaaaaaaccagcaccagctccaggtg 1944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 cagcaccaactgctccaggtggcgctccaatgatgaaaaaaccagcaccagctccaggtg 1027


Query: 1945 gtgctccaatgatgaaaaaaccagcaccagttccaggtggtccagctccaggtggttctg 2004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 gtgctccaatgatgaaaaaaccagcaccagttccaggtggtccagctccaggtggttctg 1087


Query: 2005 caattatgaaaccagcaggcggagtttctaaaccattaccatcaccaactggtgccccaa 2064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1088 caattatgaaaccagcaggcggagtttctaaaccattaccatcaccaactggtgccccaa 1147


Query: 2065 tgatgaagaaaccagctcca 2084
||||||||||||||||||||
Sbjct: 1148 tgatgaagaaaccagctcca 1167


Score = 398 bits (201), Expect = e-110
Identities = 201/201 (100%)
Strand = Plus / Plus


Query: 2077 cagctccaccacctcaacaatatatcgctctttacgagtacgacgctatgcaaccagatg 2136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1286 cagctccaccacctcaacaatatatcgctctttacgagtacgacgctatgcaaccagatg 1345


Query: 2137 aattaactttcaaagaaaatgatgtcatcaatttaattaaaaaagtagatgctgattggt 2196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1346 aattaactttcaaagaaaatgatgtcatcaatttaattaaaaaagtagatgctgattggt 1405


Query: 2197 ggcaaggtgaattagttagaactaaacaaattggtatgttaccttcaaattatgttcaac 2256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1406 ggcaaggtgaattagttagaactaaacaaattggtatgttaccttcaaattatgttcaac 1465


Query: 2257 aaatttaaaatcaaataaaat 2277
|||||||||||||||||||||
Sbjct: 1466 aaatttaaaatcaaataaaat 1486


Score = 52.0 bits (26), Expect = 3e-06
Identities = 49/56 (87%), Gaps = 3/56 (5%)
Strand = Plus / Plus


Query: 1943 tggtgctccaatgatgaaaaaaccagcacca---gttccaggtggtccagctccag 1995
|||||| ||||||||||| |||||||| ||| | ||||||||||||||||||||
Sbjct: 1137 tggtgccccaatgatgaagaaaccagctccaaccgctccaggtggtccagctccag 1192


Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 1909 ctccaatgatgaaaaaaccagca 1931
|||||||||||||||||||||||
Sbjct: 1205 ctccaatgatgaaaaaaccagca 1227


Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 1948 ctccaatgatgaaaaaaccagca 1970
|||||||||||||||||||||||
Sbjct: 1205 ctccaatgatgaaaaaaccagca 1227


Score = 40.1 bits (20), Expect = 0.010
Identities = 29/32 (90%)
Strand = Plus / Plus


Query: 1875 atgaaaaaaccagcaccaactgctccaggtgg 1906
||||| |||||||| ||||| |||||||||||
Sbjct: 1150 atgaagaaaccagctccaaccgctccaggtgg 1181


Score = 32.2 bits (16), Expect = 2.5
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 2061 ccaatgatgaagaaaccagc 2080
||||||||||| ||||||||
Sbjct: 1207 ccaatgatgaaaaaaccagc 1226


>Contig-U12672-1 (Contig-U12672-1Q) /CSM_Contig/Contig-U12672-1Q.Seq.d
Length = 1314

Score = 91.7 bits (46), Expect = 3e-18
Identities = 79/90 (87%)
Strand = Plus / Plus


Query: 91 aatccattgttggaagcatttggtaatgctaaaactcttcgtaataataattcttcacgt 150
|||||||| |||||||||||||||||||| ||||||||| | ||| ||||||| ||||||
Sbjct: 449 aatccattattggaagcatttggtaatgcaaaaactcttagaaatgataattcatcacgt 508


Query: 151 ttcggtaaatactttgaaattcaattcaat 180
|| |||||||| | ||||| |||||||||
Sbjct: 509 tttggtaaatatatggaaatgcaattcaat 538


Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus


Query: 706 gatgcattagcaaaagcaatttatgatcgtttattcaattggttagt 752
|||||| | ||||| ||| | ||||| ||||||||||||||||||||
Sbjct: 1079 gatgcacttgcaaaggcattgtatgaacgtttattcaattggttagt 1125


Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus


Query: 199 ggtggtaaaatcacaaattacctcttggagaaatc 233
||||||||||| |||||||| |||||||| |||||
Sbjct: 557 ggtggtaaaattacaaattatctcttggaaaaatc 591


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 30,511
Number of Sequences: 6905
Number of extensions: 30511
Number of successful extensions: 3368
Number of sequences better than 10.0: 154
length of query: 2277
length of database: 5,674,871
effective HSP length: 16
effective length of query: 2261
effective length of database: 5,564,391
effective search space: 12581088051
effective search space used: 12581088051
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2008.11.30
Homology vs DNA
Query= Contig-U12409-1 (Contig-U12409-1Q) /CSM_Contig/Contig-U12409-1Q.Seq.d
(2277 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ394816) Dictyostelium discoideum cDNA clone:dds36h17, 5' ... 1312 0.0 1
(BJ333188) Dictyostelium discoideum cDNA clone:dda41c24, 5' ... 1259 0.0 1
(BJ418013) Dictyostelium discoideum cDNA clone:ddv31i12, 5' ... 1255 0.0 1
(BJ419385) Dictyostelium discoideum cDNA clone:ddv35o21, 5' ... 1251 0.0 1
(BJ437970) Dictyostelium discoideum cDNA clone:ddv35o21, 3' ... 1249 0.0 1
(BJ418574) Dictyostelium discoideum cDNA clone:ddv33c07, 5' ... 1237 0.0 1
(BJ426168) Dictyostelium discoideum cDNA clone:ddv58j06, 5' ... 1102 0.0 1
(BJ414120) Dictyostelium discoideum cDNA clone:ddv18j06, 5' ... 1102 0.0 1
(L35323) Dictyostelium discoideum myosin IC (myoC) gene, com... 1025 0.0 3
(BJ445003) Dictyostelium discoideum cDNA clone:ddv58j06, 3' ... 858 0.0 2
(BJ437117) Dictyostelium discoideum cDNA clone:ddv33c07, 3' ... 858 0.0 2
(BJ436498) Dictyostelium discoideum cDNA clone:ddv31i12, 3' ... 858 0.0 3
(BJ351023) Dictyostelium discoideum cDNA clone:dda41c24, 3' ... 819 0.0 2
(AU039985) Dictyostelium discoideum slug cDNA, clone SLH381. 801 0.0 3
(BJ437497) Dictyostelium discoideum cDNA clone:ddv34o12, 3' ... 795 0.0 2
(BJ426474) Dictyostelium discoideum cDNA clone:ddv59k02, 5' ... 769 0.0 2
(BJ445323) Dictyostelium discoideum cDNA clone:ddv59k02, 3' ... 674 0.0 2
(BJ432247) Dictyostelium discoideum cDNA clone:ddv18j06, 3' ... 819 0.0 2
(BJ406832) Dictyostelium discoideum cDNA clone:dds36h17, 3' ... 755 0.0 3
(BJ349268) Dictyostelium discoideum cDNA clone:dda35o20, 3' ... 519 e-142 1
(BJ440917) Dictyostelium discoideum cDNA clone:ddv45j02, 3' ... 458 e-124 1
(M26037) D.discoideum myosin I heavy chain gene, complete cds. 101 1e-82 16
(L16509) Dictyostelium discoideum mRNA sequence. 107 1e-39 8
(S73909) abmA=actin-based motor [Dictyostelium, Genomic, 340... 60 2e-36 8
(BJ395063) Dictyostelium discoideum cDNA clone:dds37c17, 5' ... 101 5e-33 3
(BJ339104) Dictyostelium discoideum cDNA clone:dda64l01, 5' ... 101 5e-33 3
(BJ336414) Dictyostelium discoideum cDNA clone:dda53g21, 5' ... 101 5e-33 3
(BJ331248) Dictyostelium discoideum cDNA clone:dda34d14, 5' ... 101 5e-33 3
(BJ332606) Dictyostelium discoideum cDNA clone:dda39o18, 5' ... 101 5e-33 3
(BJ333130) Dictyostelium discoideum cDNA clone:dda41e18, 5' ... 101 5e-33 3
(BJ418360) Dictyostelium discoideum cDNA clone:ddv32a17, 5' ... 101 5e-33 3
(BJ397805) Dictyostelium discoideum cDNA clone:dds47m18, 5' ... 101 5e-33 3
(BJ364626) Dictyostelium discoideum cDNA clone:ddc32j11, 5' ... 101 5e-33 3
(BJ332242) Dictyostelium discoideum cDNA clone:dda38n12, 5' ... 101 5e-33 3
(BJ337636) Dictyostelium discoideum cDNA clone:dda58m02, 5' ... 101 5e-33 3
(BJ334398) Dictyostelium discoideum cDNA clone:dda46o02, 5' ... 101 5e-33 3
(BJ333965) Dictyostelium discoideum cDNA clone:dda44l13, 5' ... 101 5e-33 3
(AU062053) Dictyostelium discoideum slug cDNA, clone SLH381. 155 9e-33 1
(BJ395001) Dictyostelium discoideum cDNA clone:dds37e12, 5' ... 101 2e-32 3
(BJ396402) Dictyostelium discoideum cDNA clone:dds42e24, 5' ... 101 2e-32 3
(BJ336712) Dictyostelium discoideum cDNA clone:dda54j21, 5' ... 101 2e-32 3
(BJ327187) Dictyostelium discoideum cDNA clone:dda19d15, 5' ... 74 2e-31 8
(BJ344992) Dictyostelium discoideum cDNA clone:dda21a12, 3' ... 74 9e-31 8
(AB017909) Dictyostelium discoideum myoK gene, complete cds. 70 2e-29 7
(BJ331793) Dictyostelium discoideum cDNA clone:dda36h05, 5' ... 90 2e-29 3
(AF090534) Dictyostelium discoideum unconventional myosin he... 70 3e-29 7
(FE243103) CAPG7484.fwd CAPG Naegleria gruberi amoeba stage ... 94 3e-28 3
(BJ420641) Dictyostelium discoideum cDNA clone:ddv39p20, 5' ... 86 3e-28 3
(L06805) Dictyostelium discoideum DMIE gene, complete cds. 92 3e-28 4
(FE246355) CAPG9374.fwd CAPG Naegleria gruberi amoeba stage ... 72 8e-28 3
(BJ338873) Dictyostelium discoideum cDNA clone:dda63g10, 5' ... 101 1e-27 3
(BJ331380) Dictyostelium discoideum cDNA clone:dda35i02, 5' ... 101 1e-27 3
(BJ334200) Dictyostelium discoideum cDNA clone:dda45a17, 5' ... 101 1e-27 3
(BJ392756) Dictyostelium discoideum cDNA clone:dds28g21, 5' ... 68 2e-25 5
(BJ366740) Dictyostelium discoideum cDNA clone:ddc40h03, 5' ... 68 2e-25 5
(AZ527970) ENTBU93TF Entamoeba histolytica Sheared DNA Entam... 58 2e-25 5
(BJ418886) Dictyostelium discoideum cDNA clone:ddv34i10, 5' ... 68 2e-25 5
(U89655) Entamoeba histolytica unconventional myosin IB mRNA... 58 3e-25 6
(BJ397376) Dictyostelium discoideum cDNA clone:dds46g01, 5' ... 101 2e-23 2
(BJ337256) Dictyostelium discoideum cDNA clone:dda56f21, 5' ... 101 2e-23 2
(BJ395413) Dictyostelium discoideum cDNA clone:dds38d23, 5' ... 101 2e-23 2
(BJ365634) Dictyostelium discoideum cDNA clone:ddc36e04, 5' ... 101 2e-23 2
(BJ338002) Dictyostelium discoideum cDNA clone:dda59a24, 5' ... 101 2e-23 2
(BJ422631) Dictyostelium discoideum cDNA clone:ddv46f16, 5' ... 101 2e-23 2
(BJ395270) Dictyostelium discoideum cDNA clone:dds38c11, 5' ... 101 2e-23 2
(BJ331591) Dictyostelium discoideum cDNA clone:dda36d07, 5' ... 101 2e-23 2
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 70 2e-22 15
(BJ419312) Dictyostelium discoideum cDNA clone:ddv35p13, 5' ... 68 2e-22 4
(BJ422185) Dictyostelium discoideum cDNA clone:ddv45k02, 5' ... 92 1e-21 2
(BJ397686) Dictyostelium discoideum cDNA clone:dds47p02, 5' ... 92 1e-21 2
(BJ333784) Dictyostelium discoideum cDNA clone:dda44c03, 5' ... 92 1e-21 2
(BJ425706) Dictyostelium discoideum cDNA clone:ddv56h14, 5' ... 92 1e-21 2
(BJ332839) Dictyostelium discoideum cDNA clone:dda40d01, 5' ... 92 1e-21 2
(BJ370010) Dictyostelium discoideum cDNA clone:ddc52h19, 5' ... 107 8e-21 2
(BJ334313) Dictyostelium discoideum cDNA clone:dda45k21, 5' ... 68 8e-21 5
(BJ425481) Dictyostelium discoideum cDNA clone:ddv55i23, 5' ... 107 8e-21 2
(BJ419822) Dictyostelium discoideum cDNA clone:ddv37g11, 5' ... 107 8e-21 2
(BJ418484) Dictyostelium discoideum cDNA clone:ddv32m19, 5' ... 107 8e-21 2
(BJ422906) Dictyostelium discoideum cDNA clone:ddv47m10, 5' ... 107 9e-21 2
(BJ324332) Dictyostelium discoideum cDNA clone:dda5f23, 5' e... 68 2e-20 6
(U52515) Caenorhabditis elegans class I unconventional myosi... 92 6e-20 2
(C60302) Caenorhabditis elegans cDNA clone yk194g5 : 5' end,... 92 6e-20 2
(AR551413) Sequence 6544 from patent US 6747137. 74 7e-19 4
(BJ441389) Dictyostelium discoideum cDNA clone:ddv46f16, 3' ... 68 1e-18 6
(BJ354252) Dictyostelium discoideum cDNA clone:dda53d04, 3' ... 68 1e-18 6
(BJ379103) Dictyostelium discoideum cDNA clone:ddc33d24, 3' ... 68 1e-18 6
(BJ446227) Dictyostelium discoideum cDNA clone:ddv62f04, 3' ... 68 1e-18 6
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 107 2e-18 1
(AX831922) Sequence 2642 from Patent WO03072602. 64 2e-18 6
(AX820892) Sequence 2642 from Patent EP1338608. 64 2e-18 6
(AX596534) Sequence 2188 from Patent EP1258494. 64 2e-18 6
(DJ211885) Method for identification of useful proteins deri... 64 1e-17 6
(AL408712) T7 end of clone AV0AA010C06 of library AV0AA from... 66 2e-17 6
(BJ379289) Dictyostelium discoideum cDNA clone:ddc34i09, 3' ... 68 3e-17 5
(BJ354349) Dictyostelium discoideum cDNA clone:dda53h08, 3' ... 68 3e-17 5
(EA376749) Sequence 25572 from patent US 7314974. 64 3e-17 6
(AR528016) Sequence 319 from patent US 6723837. 64 3e-17 6
(BJ443151) Dictyostelium discoideum cDNA clone:ddv52f03, 3' ... 66 4e-17 5
(BJ328296) Dictyostelium discoideum cDNA clone:dda23l18, 5' ... 68 7e-17 5
(BJ395652) Dictyostelium discoideum cDNA clone:dds39m13, 5' ... 101 1e-16 1

>(BJ394816) Dictyostelium discoideum cDNA clone:dds36h17, 5' end,
single read.
Length = 662

Score = 1312 bits (662), Expect = 0.0
Identities = 662/662 (100%)
Strand = Plus / Plus


Query: 516 agaacaagctggtgataaagttacaattgctgatacatctgtattggattttgtatcaca 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaacaagctggtgataaagttacaattgctgatacatctgtattggattttgtatcaca 60


Query: 576 attattagatgtaccaagtcattttttaaaaacagcattagaatttagacaaatggaaac 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attattagatgtaccaagtcattttttaaaaacagcattagaatttagacaaatggaaac 120


Query: 636 tagacatggtaatcaaagaggtacacaatataatgtaccattgaataagacacaagcaat 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagacatggtaatcaaagaggtacacaatataatgtaccattgaataagacacaagcaat 180


Query: 696 tgcaggtagagatgcattagcaaaagcaatttatgatcgtttattcaattggttagttga 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgcaggtagagatgcattagcaaaagcaatttatgatcgtttattcaattggttagttga 240


Query: 756 tcgtatcaataaggagatggataatccacaaaaaggtttaatgattggtgtattggatat 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcgtatcaataaggagatggataatccacaaaaaggtttaatgattggtgtattggatat 300


Query: 816 ttatggatttgaagttttcgatagaaatggatttgaacaattttgtatcaactatgtcaa 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttatggatttgaagttttcgatagaaatggatttgaacaattttgtatcaactatgtcaa 360


Query: 876 tgaaaagttacaacaaatcttcatcgagtttacattaaagatggaacaagaagagtatgt 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgaaaagttacaacaaatcttcatcgagtttacattaaagatggaacaagaagagtatgt 420


Query: 936 tcgtgaaggtattaaatgggagccaattccattctttgataataagattgtatgtgaatt 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcgtgaaggtattaaatgggagccaattccattctttgataataagattgtatgtgaatt 480


Query: 996 gattgaaggtaagaatccaccaggtattttcagtattttagatgatgtttgtcgtgcagt 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gattgaaggtaagaatccaccaggtattttcagtattttagatgatgtttgtcgtgcagt 540


Query: 1056 tcattcacaagccgaaggtgccgatcaaaagttacttcaatccattgccgtttgtaaatc 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcattcacaagccgaaggtgccgatcaaaagttacttcaatccattgccgtttgtaaatc 600


Query: 1116 aaatccacatttcgatactcgtggtaatgcattctgtgttaaacattatgcaggtgatgt 1175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaatccacatttcgatactcgtggtaatgcattctgtgttaaacattatgcaggtgatgt 660


Query: 1176 ag 1177
||
Sbjct: 661 ag 662

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 2,699,462,654
Number of extensions: 161651344
Number of successful extensions: 12689577
Number of sequences better than 10.0: 527
Length of query: 2277
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 2253
Effective length of database: 97,308,875,965
Effective search space: 219236897549145
Effective search space used: 219236897549145
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7. 3
Homology vs Protein
Query= Contig-U12409-1 (Contig-U12409-1Q) /CSM_Contig/Contig-U12409-1Q.Seq.d
(2277 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(P42522) RecName: Full=Myosin IC heavy chain; 1089 0.0
L35323_1(L35323|pid:none) Dictyostelium discoideum myosin IC (my... 1035 0.0
AF085185_1(AF085185|pid:none) Acanthamoeba castellanii Myosin-IA... 657 0.0
A56511(A56511) myosin I myoA - Emericella nidulans &U12427_1(U1... 601 e-170
(A8N2Y6) RecName: Full=Myosin-1; AltName: Full=Class I unconvent... 599 e-169
(A2R5J1) RecName: Full=Myosin-1; AltName: Full=Class I unconvent... 595 e-168
(Q2US45) RecName: Full=Myosin-1; AltName: Full=Class I unconvent... 594 e-168
(Q1DLP2) RecName: Full=Myosin-1; AltName: Full=Class I unconvent... 593 e-167
(Q6FN18) RecName: Full=Myosin-5; AltName: Full=Class I unconvent... 592 e-167
(A8PWF6) RecName: Full=Myosin-1; AltName: Full=Class I unconvent... 590 e-167
(B0CRJ3) RecName: Full=Myosin-1; AltName: Full=Class I unconvent... 589 e-166
(A7TDZ8) RecName: Full=Myosin-1; AltName: Full=Class I unconvent... 589 e-166
(Q6CVE9) RecName: Full=Myosin-1; AltName: Full=Class I unconvent... 588 e-166
(A6ZMG6) RecName: Full=Myosin-5; AltName: Full=Class I unconvent... 587 e-166
(A6ZZJ1) RecName: Full=Myosin-3; AltName: Full=Class I unconvent... 587 e-166
(Q758Q9) RecName: Full=Myosin-1; AltName: Full=Class I unconvent... 586 e-165
(Q5K8T7) RecName: Full=Myosin-1; AltName: Full=Class I unconvent... 585 e-165
CU928179_830(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 584 e-165
(A6SED8) RecName: Full=Myosin-1; AltName: Full=Class I unconvent... 581 e-164
(Q9Y7Z8) RecName: Full=Myosin-1; AltName: Full=Class I unconvent... 579 e-163
A33284(A33284) myosin heavy chain IB - slime mold (Dictyostelium... 578 e-163
(Q59MQ0) RecName: Full=Myosin-5; AltName: Full=Class I unconvent... 575 e-162
(A5E4A8) RecName: Full=Myosin-1; AltName: Full=Class I unconvent... 574 e-162
(Q6FMJ3) RecName: Full=Myosin-3; AltName: Full=Class I unconvent... 572 e-161
(Q6BUQ2) RecName: Full=Myosin-1; AltName: Full=Class I unconvent... 566 e-159
AY893005_1(AY893005|pid:none) Synthetic construct Homo sapiens c... 562 e-158
BC028071_1(BC028071|pid:none) Homo sapiens myosin IF, mRNA (cDNA... 562 e-158
AK092877_1(AK092877|pid:none) Homo sapiens cDNA FLJ35558 fis, cl... 560 e-158
AB290178_1(AB290178|pid:none) Homo sapiens mRNA for MYO1F varian... 560 e-157
AB210037_1(AB210037|pid:none) Homo sapiens mRNA for MYO1F varian... 560 e-157
AF528163_2(AF528163|pid:none) Mus musculus strain 129/Sv chromos... 558 e-157
BC046502_1(BC046502|pid:none) Mus musculus myosin IF, mRNA (cDNA... 558 e-157
S31926(S31926) myosin IB heavy chain, brush border - chicken &X... 553 e-156
CU633438_272(CU633438|pid:none) Podospora anserina genomic DNA c... 553 e-155
(P19706) RecName: Full=Myosin heavy chain IB; AltName: Full=Myos... 551 e-155
BC074116_1(BC074116|pid:none) Xenopus laevis MGC81789 protein, m... 551 e-155
BC051391_1(BC051391|pid:none) Mus musculus myosin IE, mRNA (cDNA... 550 e-155
(Q7SDM3) RecName: Full=Myosin-1; AltName: Full=Class I unconvent... 550 e-154
MWAXIB(JQ0095;B34448)myosin heavy chain IB - Acanthamoeba castel... 548 e-154
(P70248) RecName: Full=Myosin-If; &A59300(A59300) &X97650_1(X97... 546 e-154
AK029145_1(AK029145|pid:none) Mus musculus 10 days neonate skin ... 543 e-152
(Q12965) RecName: Full=Myosin-Ie; AltName: Full=Myosin-Ic; &AB2... 543 e-152
BC046842_1(BC046842|pid:none) Xenopus laevis myosin I e, mRNA (c... 535 e-150
BC110717_1(BC110717|pid:none) Xenopus laevis myosin I e, mRNA (c... 535 e-150
AX405667_1(AX405667|pid:none) Sequence 82 from Patent WO0222660. 530 e-149
AF248488_1(AF248488|pid:none) Strongylocentrotus purpuratus amoe... 530 e-149
BC084472_1(BC084472|pid:none) Xenopus tropicalis myosin IF, mRNA... 530 e-148
AF051353_1(AF051353|pid:none) Acanthamoeba castellanii myosin IC... 524 e-147
A47106(A47106;B47106)myosin heavy chain ID - slime mold (Dictyos... 501 e-140
U52515_1(U52515|pid:none) Caenorhabditis elegans class I unconve... 498 e-139
(P10569) RecName: Full=Myosin IC heavy chain; &J02974_1(J02974|... 494 e-138
AF090534_1(AF090534|pid:none) Dictyostelium discoideum unconvent... 474 e-132
AC116986_52(AC116986|pid:none) Dictyostelium discoideum chromoso... 474 e-132
JG0183(JG0183)myosin Myok - Dictyostelium discoideum 474 e-132
(Q03479) RecName: Full=Myosin IE heavy chain; 460 e-127
(P22467) RecName: Full=Myosin IA heavy chain; AltName: Full=Myos... 454 e-126
L06805_1(L06805|pid:none) Dictyostelium discoideum DMIE gene, co... 437 e-121
S45574(S45574) myosin IB - fruit fly (Drosophila melanogaster) ... 422 e-116
AE014296_248(AE014296|pid:none) Drosophila melanogaster chromoso... 418 e-115
AY069044_1(AY069044|pid:none) Drosophila melanogaster GH04201 fu... 418 e-115
AL714031_1(AL714031|pid:none) Zebrafish DNA sequence from clone ... 413 e-113
BC147926_1(BC147926|pid:none) Bos taurus myosin IB, mRNA (cDNA c... 410 e-112
AB169235_1(AB169235|pid:none) Macaca fascicularis testis cDNA, c... 408 e-112
(O43795) RecName: Full=Myosin-Ib; AltName: Full=Myosin I alpha; ... 408 e-112
BC054786_1(BC054786|pid:none) Mus musculus myosin IB, mRNA (cDNA... 408 e-112
(Q5ZLA6) RecName: Full=Myosin-Ic; AltName: Full=Myosin I beta; A... 407 e-111
I51173(I51173) myosin I beta - bullfrog &U14382_1(U14382|pid:no... 407 e-111
(O00159) RecName: Full=Myosin-Ic; AltName: Full=Myosin I beta; A... 405 e-111
AK295761_1(AK295761|pid:none) Homo sapiens cDNA FLJ53573 complet... 405 e-111
AK292910_1(AK292910|pid:none) Homo sapiens cDNA FLJ77245 complet... 405 e-111
AB210015_1(AB210015|pid:none) Homo sapiens mRNA for MYO1C varian... 405 e-111
(Q05096) RecName: Full=Myosin-Ib; AltName: Full=Myosin I alpha; ... 405 e-111
C45439(C45439)myosin-I, Myr 1b (alternatively spliced) - rat 405 e-111
B45439(B45439)myosin-I, Myr 1c (alternatively spliced) - rat 405 e-111
(Q17R14) RecName: Full=Myosin-Id; &BC118080_1(BC118080|pid:none) 405 e-111
AK155530_1(AK155530|pid:none) Mus musculus NOD-derived CD11c +ve... 404 e-111
(Q9ERB6) RecName: Full=Myosin-Ic; AltName: Full=Myosin I beta; A... 404 e-111
AK154294_1(AK154294|pid:none) Mus musculus NOD-derived CD11c +ve... 404 e-111
(Q63357) RecName: Full=Myosin-Id; AltName: Full=Myosin heavy cha... 404 e-110
X71997_1(X71997|pid:none) R.norvegicus myr4 mRNA for myosin I he... 404 e-110
AL591410_2(AL591410|pid:none) Mouse DNA sequence from clone RP23... 403 e-110
AK049374_1(AK049374|pid:none) Mus musculus ES cells cDNA, RIKEN ... 403 e-110
(Q5SYD0) RecName: Full=Myosin-Id; &AL591146_11(AL591146|pid:non... 403 e-110
AB018270_1(AB018270|pid:none) Homo sapiens mRNA for KIAA0727 pro... 403 e-110
A53933(A53933)myosin I myr 4 - rat 403 e-110
CR858601_1(CR858601|pid:none) Pongo abelii mRNA; cDNA DKFZp469G2... 403 e-110
BC140534_1(BC140534|pid:none) Bos taurus myosin IC, mRNA (cDNA c... 402 e-110
S41749(S41749;A55744;S33497) myosin heavy chain I beta - bovine ... 401 e-110
BC150765_1(BC150765|pid:none) Mus musculus myosin ID, mRNA (cDNA... 401 e-110
BC060477_1(BC060477|pid:none) Xenopus laevis myosin-1c, mRNA (cD... 400 e-109
Z22852_1(Z22852|pid:none) B.taurus myosin IB mRNA, complete CDS. 399 e-109
A45438(A45438) myosin I alpha chain - mouse &L00923_1(L00923|pi... 399 e-109
(A0MP03) RecName: Full=Myosin-Ic-A; AltName: Full=Myosin I beta-... 399 e-109
T24349(T24349;S38572) myosin IA - Caenorhabditis elegans &X7556... 395 e-108
BC073240_1(BC073240|pid:none) Xenopus laevis myosin 1d, mRNA (cD... 392 e-107
(A5PF48) RecName: Full=Myosin-Ic; AltName: Full=Myosin I beta; A... 388 e-106
(Q9U1M8) RecName: Full=Myosin-I heavy chain; AltName: Full=Class... 387 e-105
(P47807) RecName: Full=Myosin-Ia; AltName: Full=Brush border myo... 387 e-105
A33620(A33620) myosin heavy chain I, brush border - chicken (fra... 386 e-105
AC116957_47(AC116957|pid:none) Dictyostelium discoideum chromoso... 386 e-105
(O88329) RecName: Full=Myosin-Ia; AltName: Full=Brush border myo... 385 e-105
AF009960_1(AF009960|pid:none) Mus musculus brush border myosin-I... 385 e-105
(P08799) RecName: Full=Myosin-2 heavy chain; AltName: Full=Myosi... 384 e-105
CP001323_780(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 384 e-105
A26655(A26655;A24728;S00250) myosin heavy chain [similarity] - s... 384 e-104
(Q9D6A1) RecName: Full=Myosin-Ih; 383 e-104
EU827504_1(EU827504|pid:none) Synthetic construct truncated myos... 382 e-104
AY374516_1(AY374516|pid:none) Oryza sativa (japonica cultivar-gr... 381 e-104
AP008209_2621(AP008209|pid:none) Oryza sativa (japonica cultivar... 381 e-104
AC091811_2(AC091811|pid:none) Oryza sativa chromosome 3 BAC OSJN... 381 e-104
AC087852_1(AC087852|pid:none) Oryza sativa chromosome 3 BAC OJ11... 381 e-104
T14279(T14279) myosin-like protein my5 - common sunflower &U947... 380 e-104
T14276(T14276) myosin-like protein my2 - common sunflower (fragm... 380 e-104
(Q62774) RecName: Full=Myosin-Ia; AltName: Full=Brush border myo... 380 e-104
AP000368_4(AP000368|pid:none) Arabidopsis thaliana genomic DNA, ... 380 e-103
AC006533_8(AC006533|pid:none) Arabidopsis thaliana chromosome 2 ... 380 e-103
AF233886_1(AF233886|pid:none) Vallisneria natans unconventional ... 379 e-103
BC105312_1(BC105312|pid:none) Bos taurus myosin IA, mRNA (cDNA c... 379 e-103
AB007459_1(AB007459|pid:none) Chara corallina ccm1 mRNA for myos... 379 e-103
DQ875135_1(DQ875135|pid:none) Nicotiana benthamiana myosin XI-2 ... 378 e-103
AF338254_1(AF338254|pid:none) Petroselinum crispum myosin subfam... 378 e-103
AL137081_7(AL137081|pid:none) Arabidopsis thaliana DNA chromosom... 378 e-103
AB082121_1(AB082121|pid:none) Nicotiana tabacum Ntmy175 mRNA for... 377 e-103
CU468955_1(CU468955|pid:none) Zebrafish DNA sequence from clone ... 377 e-103
A59310(A59310) unconventional myosin heavy chain - maize &AF104... 376 e-102
AF009961_1(AF009961|pid:none) Homo sapiens brush border myosin-I... 376 e-102
AP004028_4(AP004028|pid:none) Oryza sativa Japonica Group genomi... 375 e-102
AM428592_1(AM428592|pid:none) Vitis vinifera contig VV78X007288.... 374 e-102
AE016817_753(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 373 e-101
AC022492_28(AC022492|pid:none) Genomic sequence for Arabidopsis ... 373 e-101
AC002411_7(AC002411|pid:none) Arabidopsis thaliana chromosome 1 ... 372 e-101
AB180675_1(AB180675|pid:none) Nicotiana tabacum Ntmy170 mRNA for... 372 e-101
DQ875137_1(DQ875137|pid:none) Nicotiana benthamiana myosin XI-K ... 372 e-101
AM920435_57(AM920435|pid:none) Penicillium chrysogenum Wisconsin... 372 e-101
(P32492) RecName: Full=Myosin-4; AltName: Full=SWI5-dependent HO... 372 e-101
AL035353_18(AL035353|pid:none) Arabidopsis thaliana DNA chromoso... 369 e-100
T14278(T14278) myosin-like protein my4 - common sunflower &U947... 369 e-100
CU928176_171(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 369 e-100
AP007150_593(AP007150|pid:none) Aspergillus oryzae RIB40 genomic... 368 e-100
(Q876G9) RecName: Full=Myosin-2; AltName: Full=Class V unconvent... 368 e-100
(P19524) RecName: Full=Myosin-2; AltName: Full=Class V unconvent... 368 e-100
AC002376_15(AC002376|pid:none) Sequence of BAC T1G11 from Arabid... 367 e-100
AM433372_1(AM433372|pid:none) Vitis vinifera contig VV78X015448.... 367 1e-99
AC146681_1(AC146681|pid:none) Medicago truncatula clone mth2-77o... 367 1e-99
AC133341_26(AC133341|pid:none) Medicago truncatula clone mth2-28... 367 1e-99
BX294023_13(BX294023|pid:none) Neurospora crassa DNA linkage gro... 367 1e-99
AB185287_1(AB185287|pid:none) Adiantum capillus-veneris myo11-1 ... 367 1e-99
AF335500_1(AF335500|pid:none) Physarum polycephalum major plasmo... 366 2e-99
(Q875X3) RecName: Full=Myosin-2A; AltName: Full=Class V unconven... 366 2e-99
(Q5SUA5) RecName: Full=Myosin-Ig; &AL646047_1(AL646047|pid:none) 365 3e-99
AK152797_1(AK152797|pid:none) Mus musculus bone marrow macrophag... 365 3e-99
AC092263_15(AC092263|pid:none) Oryza sativa chromosome 3 BAC OSJ... 365 4e-99
AB185288_1(AB185288|pid:none) Adiantum capillus-veneris myo11-2 ... 365 4e-99
AK088011_1(AK088011|pid:none) Mus musculus 2 days neonate thymus... 365 4e-99
AK171284_1(AK171284|pid:none) Mus musculus NOD-derived CD11c +ve... 365 4e-99
AK030825_1(AK030825|pid:none) Mus musculus adult male thymus cDN... 363 1e-98
AM464409_2(AM464409|pid:none) Vitis vinifera contig VV78X209150.... 363 1e-98
AF380932_1(AF380932|pid:none) Homo sapiens unconventional myosin... 363 2e-98
AF380933_1(AF380933|pid:none) Homo sapiens unconventional myosin... 363 2e-98
AP005771_5(AP005771|pid:none) Oryza sativa Japonica Group genomi... 361 6e-98
AK146251_1(AK146251|pid:none) Mus musculus CRL-1722 L5178Y-R cDN... 361 6e-98
S33812(S33812) myosin-like protein ATM - Arabidopsis thaliana &... 361 6e-98
AL035525_13(AL035525|pid:none) Arabidopsis thaliana DNA chromoso... 361 6e-98
AP002050_1(AP002050|pid:none) Arabidopsis thaliana genomic DNA, ... 361 6e-98
CR382136_239(CR382136|pid:none) Debaryomyces hansenii strain CBS... 361 6e-98
AC092388_9(AC092388|pid:none) Oryza sativa chromosome 10 BAC OSJ... 360 1e-97
CR382121_162(CR382121|pid:none) Kluyveromyces lactis strain NRRL... 359 2e-97
X98411_1(X98411|pid:none) Homo sapiens partial mRNA for myosin-IF. 359 3e-97
FN392319_1481(FN392319|pid:none) Pichia pastoris GS115 chromosom... 358 4e-97
FM992688_1261(FM992688|pid:none) Candida dubliniensis CD36 chrom... 358 5e-97
AF077352_1(AF077352|pid:none) Chlamydomonas reinhardtii myosin h... 357 8e-97
A59233(A59233) myosin VII-like protein - fruit fly (Drosophila m... 355 5e-96
AE014134_1365(AE014134|pid:none) Drosophila melanogaster chromos... 355 5e-96
AE014134_1366(AE014134|pid:none) Drosophila melanogaster chromos... 355 5e-96
AC139743_5(AC139743|pid:none) Medicago truncatula clone mth2-16m... 354 7e-96
DQ875138_1(DQ875138|pid:none) Nicotiana benthamiana myosin VIII-... 354 9e-96
T00727(T00727;S51822;S55444)myosin heavy chain PCR43 - Arabidops... 354 9e-96
BX530035_1(BX530035|pid:none) Zebrafish DNA sequence from clone ... 353 1e-95
CR382131_4(CR382131|pid:none) Yarrowia lipolytica strain CLIB122... 353 1e-95
AJ577236_1(AJ577236|pid:none) Ustilago maydis myo5 gene for myos... 353 2e-95
AC092779_13(AC092779|pid:none) Oryza sativa chromosome 3 BAC OSJ... 353 2e-95
BC163575_1(BC163575|pid:none) Danio rerio myosin VA (heavy polyp... 352 3e-95
(P54695) RecName: Full=Myosin IF heavy chain; 352 3e-95
CP000586_323(CP000586|pid:none) Ostreococcus lucimarinus CCE9901... 352 4e-95
B59254(B59254) mysoin heavy chain 12, splice form2 - human &Y07... 351 6e-95
AB290180_1(AB290180|pid:none) Homo sapiens mRNA for MYO5A varian... 351 8e-95
(Q875X4) RecName: Full=Myosin-2B; AltName: Full=Class V unconven... 350 1e-94
CT033761_1(CT033761|pid:none) Mouse DNA sequence from clone RP23... 350 1e-94
(Q9NQX4) RecName: Full=Myosin-Vc; &AF272390_1(AF272390|pid:none) 350 1e-94
(Q622K8) RecName: Full=Unconventional myosin heavy chain 6; 350 2e-94
AF542530_26(AF542530|pid:none) Cryptococcus neoformans var. neof... 349 2e-94
AB209957_1(AB209957|pid:none) Sus scrofa MYO5A mRNA for myosin V... 349 2e-94
BC167830_1(BC167830|pid:none) Synthetic construct Homo sapiens c... 349 3e-94
AP008216_907(AP008216|pid:none) Oryza sativa (japonica cultivar-... 348 4e-94
(Q99104) RecName: Full=Myosin-Va; AltName: Full=Dilute myosin he... 348 4e-94
(P21271) RecName: Full=Myosin-Vb; &BC118525_1(BC118525|pid:none) 347 8e-94
(P70569) RecName: Full=Myosin-Vb; AltName: Full=Myosin heavy cha... 347 1e-93
S19188(S19188;A44359;B44359;S29249) myosin-V - chicken &Z11718_... 346 2e-93
(Q02440) RecName: Full=Myosin-Va; AltName: Full=Dilute myosin he... 346 2e-93
A59311(A59311) myosin VIII, ZMM3 - maize (fragment) &AF147738_1... 345 3e-93
AJ404001_1(AJ404001|pid:none) Danio rerio mRNA for myosin VIIA (... 345 3e-93
(P91443) RecName: Full=Unconventional myosin heavy chain 6; &T2... 345 4e-93
AJ404002_1(AJ404002|pid:none) Danio rerio mRNA for myosin VIIA (... 345 5e-93
EF592540_1(EF592540|pid:none) Oncorhynchus mykiss myosin Va mRNA... 345 5e-93
BC163570_1(BC163570|pid:none) Danio rerio myosin VIIa, mRNA (cDN... 344 7e-93
(Q9ULV0) RecName: Full=Myosin-Vb; &AB290160_1(AB290160|pid:none... 342 3e-92
AB032945_1(AB032945|pid:none) Homo sapiens mRNA for KIAA1119 pro... 342 3e-92
BX005083_7(BX005083|pid:none) Zebrafish DNA sequence from clone ... 342 3e-92
(P79114) RecName: Full=Myosin-X; AltName: Full=Unconventional my... 342 3e-92
AK049367_1(AK049367|pid:none) Mus musculus ES cells cDNA, RIKEN ... 342 4e-92
CT005271_104(CT005271|pid:none) Leishmania major strain Friedlin... 342 5e-92
(Q9HD67) RecName: Full=Myosin-X; AltName: Full=Unconventional my... 341 6e-92
AB018342_1(AB018342|pid:none) Homo sapiens mRNA for KIAA0799 pro... 341 6e-92
AY374514_1(AY374514|pid:none) Oryza sativa (japonica cultivar-gr... 339 2e-91
AF132021_1(AF132021|pid:none) Homo sapiens myosin X (MYO10) mRNA... 339 2e-91
AX405628_1(AX405628|pid:none) Sequence 43 from Patent WO0222660. 339 2e-91
AP008213_1324(AP008213|pid:none) Oryza sativa (japonica cultivar... 339 2e-91
(O94477) RecName: Full=Myosin-52; AltName: Full=Myosin type V-2;... 339 3e-91
(P54697) RecName: Full=Myosin-J heavy chain; AltName: Full=Myosi... 339 3e-91
AY710429_21(AY710429|pid:none) Cryptococcus gattii strain E566 M... 338 5e-91
BC138338_1(BC138338|pid:none) Mus musculus myosin VIIB, mRNA (cD... 338 7e-91
(P47808) RecName: Full=High molecular weight form of myosin-1; A... 338 7e-91
T18278(T18278;T30579) myosin heavy chain [similarity] - slime mo... 338 7e-91
A23662(A23662)myosin I, high molecular weight - Acanthamoeba sp. 338 7e-91
AC003981_20(AC003981|pid:none) Genomic sequence for Arabidopsis ... 337 1e-90
T30148(T30148)hypothetical protein E02C12.1 - Caenorhabditis ele... 336 2e-90
AK229471_1(AK229471|pid:none) Arabidopsis thaliana mRNA for myos... 335 3e-90
(Q99MZ6) RecName: Full=Myosin-VIIb; 335 3e-90
AF242411_1(AF242411|pid:none) Mus musculus myosin-VIIb mRNA, com... 335 3e-90
BC156151_1(BC156151|pid:none) Synthetic construct Mus musculus c... 335 3e-90
A59297(A59297) myosin X - mouse &AJ249706_1(AJ249706|pid:none) 335 4e-90
A59250(A59250) myosin - Acetabularia cliftonii &U94397_1(U94397... 334 7e-90
B45438(B45438)myosin I beta, MMI beta - mouse (fragment) 333 2e-89
AC007980_6(AC007980|pid:none) Arabidopsis thaliana chromosome I ... 333 2e-89
CP001325_574(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 333 2e-89
BT011332_1(BT011332|pid:none) Drosophila melanogaster SD18415 fu... 332 3e-89
(Q9V3Z6) RecName: Full=Myosin-VIIa; Short=DmVIIa; AltNa... 332 3e-89
BC167661_1(BC167661|pid:none) Xenopus tropicalis IQ calmodulin-b... 332 3e-89
AB010695_10(AB010695|pid:none) Arabidopsis thaliana genomic DNA,... 331 6e-89
BC172349_1(BC172349|pid:none) Synthetic construct Homo sapiens c... 330 1e-88
AC126013_17(AC126013|pid:none) Medicago truncatula clone mth2-32... 330 2e-88
(P05659) RecName: Full=Myosin-2 heavy chain, non muscle; AltName... 329 3e-88
U34227_1(U34227|pid:none) Human myosin-VIIa mRNA, partial cds. 328 4e-88
CR382137_815(CR382137|pid:none) Debaryomyces hansenii strain CBS... 328 4e-88
(O74805) RecName: Full=Myosin-51; AltName: Full=Myosin type V-1;... 328 4e-88
BC156494_1(BC156494|pid:none) Synthetic construct Mus musculus c... 328 5e-88
AY821854_1(AY821854|pid:none) Mus musculus myosin VIIa isoform 2... 328 5e-88
AY821853_1(AY821853|pid:none) Mus musculus myosin VIIa isoform 1... 328 5e-88
DQ875140_1(DQ875140|pid:none) Nicotiana benthamiana myosin VIII-... 327 9e-88
T14275(T14275) myosin-like protein my1 - common sunflower &U947... 327 9e-88
(Q5SV80) RecName: Full=Myosin-XIX; AltName: Full=Myosin head dom... 327 2e-87
AF542531_19(AF542531|pid:none) Cryptococcus neoformans var. neof... 326 2e-87
AB091825_1(AB091825|pid:none) Rattus norvegicus mRNA for myosin ... 325 3e-87
U09782_1(U09782|pid:none) Argopecten irradians myosin heavy chai... 323 2e-86
AF042349_1(AF042349|pid:none) Loligo pealei myosin heavy chain i... 320 1e-85
T16416(T16416)hypothetical protein F52B10.1 - Caenorhabditis ele... 320 2e-85
AE013599_430(AE013599|pid:none) Drosophila melanogaster chromoso... 318 4e-85
AF003826_1(AF003826|pid:none) Drosophila melanogaster myosin V m... 318 4e-85
AE013599_429(AE013599|pid:none) Drosophila melanogaster chromoso... 318 4e-85
L35322_1(L35322|pid:none) Dictyostelium discoideum myosin (myoJ)... 318 4e-85
A85318(A85318) myosin heavy chain-like protein [imported] - Arab... 318 5e-85
AL030978_18(AL030978|pid:none) Arabidopsis thaliana DNA chromoso... 318 5e-85
CU633899_80(CU633899|pid:none) Podospora anserina genomic DNA ch... 318 7e-85
AE013599_4247(AE013599|pid:none) Drosophila melanogaster chromos... 317 9e-85
AE013599_4245(AE013599|pid:none) Drosophila melanogaster chromos... 317 9e-85
S61477(S61477;S65349)myosin II heavy chain, non-muscle - fruit f... 317 9e-85
U35816_3(U35816|pid:none) Drosophila melanogaster nonmuscle myos... 317 9e-85
FN357407_36(FN357407|pid:none) Schistosoma mansoni genome sequen... 317 9e-85
U41990_2(U41990|pid:none) Caenorhabditis elegans cosmid F52B10, ... 317 1e-84
AE013599_4246(AE013599|pid:none) Drosophila melanogaster chromos... 316 2e-84
U59294_1(U59294|pid:none) Placopecten magellanicus myosin heavy ... 316 2e-84
U35816_4(U35816|pid:none) Drosophila melanogaster nonmuscle myos... 316 2e-84
AE013599_4244(AE013599|pid:none) Drosophila melanogaster chromos... 316 2e-84
U35816_2(U35816|pid:none) Drosophila melanogaster nonmuscle myos... 316 2e-84
AF542529_19(AF542529|pid:none) Cryptococcus neoformans var. grub... 316 3e-84
U59295_1(U59295|pid:none) Placopecten magellanicus myosin heavy ... 315 4e-84
BT010003_1(BT010003|pid:none) Drosophila melanogaster RE30195 fu... 315 4e-84
AE013599_428(AE013599|pid:none) Drosophila melanogaster chromoso... 315 4e-84
AF134172_1(AF134172|pid:none) Pecten maximus myosin heavy chain ... 315 5e-84
AK300381_1(AK300381|pid:none) Homo sapiens cDNA FLJ50215 complet... 314 8e-84
AY040821_1(AY040821|pid:none) Loligo pealei non-muscle myosin II... 313 2e-83
AY331133_1(AY331133|pid:none) Mus musculus myosin XVA isoform 2a... 312 3e-83
AL596090_18(AL596090|pid:none) Mouse DNA sequence from clone RP2... 312 3e-83
AL596090_16(AL596090|pid:none) Mouse DNA sequence from clone RP2... 312 3e-83
A59295(A59295) unconventional myosin-15 - mouse &AF144095_1(AF1... 312 3e-83
DQ066721_1(DQ066721|pid:none) Chlamys farreri myosin VI mRNA, pa... 312 4e-83
AL596090_17(AL596090|pid:none) Mouse DNA sequence from clone RP2... 312 4e-83
FM992692_166(FM992692|pid:none) Candida dubliniensis CD36 chromo... 311 7e-83
AJ312390_1(AJ312390|pid:none) Mus musculus mRNA for nonmuscle he... 311 9e-83
DQ131541_1(DQ131541|pid:none) Toxoplasma gondii myosin F mRNA, c... 311 9e-83
AK147211_1(AK147211|pid:none) Mus musculus 15 days embryo liver ... 311 9e-83
DQ119137_1(DQ119137|pid:none) Aplysia californica nonmuscle myos... 311 9e-83
BC045324_1(BC045324|pid:none) Danio rerio myosin, heavy polypept... 311 9e-83
AF319457_1(AF319457|pid:none) Petroselinum crispum myosin subfam... 310 1e-82
AF098989_1(AF098989|pid:none) Caenorhabditis elegans cosmid F47G... 310 1e-82
AL832639_1(AL832639|pid:none) Homo sapiens mRNA; cDNA DKFZp451J0... 310 2e-82
(P35579) RecName: Full=Myosin-9; AltName: Full=Myosin heavy chai... 310 2e-82
AK304840_1(AK304840|pid:none) Homo sapiens cDNA FLJ57040 complet... 310 2e-82
AF240690_1(AF240690|pid:none) Rana pipiens type 3 myosin heavy c... 309 3e-82
AB015484_1(AB015484|pid:none) Dugesia japonica mRNA for myosin h... 309 3e-82
BX511237_1(BX511237|pid:none) Zebrafish DNA sequence from clone ... 308 4e-82
PDBN(1BR1)A MOL_ID: 1;MOL_ID: 1; MOLECULE: MYOSIN; MOLECULE: MYO... 308 4e-82
(P08964) RecName: Full=Myosin-1; AltName: Full=Type II myosin; ... 308 4e-82
U51472_1(U51472|pid:none) Felis catus superfast myosin heavy cha... 308 6e-82
AB058959_1(AB058959|pid:none) Patinopecten yessoensis mRNA for m... 308 6e-82
AB258227_1(AB258227|pid:none) Oryzias latipes gene for fast skel... 308 7e-82
AC171265_19(AC171265|pid:none) Medicago truncatula clone mth2-2j... 307 1e-81
S03166(S03166;A27066;A26045;A36604;A43298) myosin heavy chain, g... 307 1e-81
AB020673_1(AB020673|pid:none) Homo sapiens mRNA for KIAA0866 pro... 307 1e-81
AF001548_1(AF001548|pid:none) Human Chromosome 16 BAC clone CIT9... 307 1e-81
CR858324_1(CR858324|pid:none) Pongo abelii mRNA; cDNA DKFZp468I0... 307 1e-81
(P35749) RecName: Full=Myosin-11; AltName: Full=Myosin heavy cha... 307 1e-81
(Q62812) RecName: Full=Myosin-9; AltName: Full=Myosin heavy chai... 307 1e-81
(P12847) RecName: Full=Myosin-3; AltName: Full=Myosin heavy chai... 307 1e-81
AB303687_1(AB303687|pid:none) Hypophthalmichthys molitrix MYH sc... 307 1e-81
C45438(C45438)myosin I gamma, MMI gamma - mouse (fragment) 307 1e-81
AY618702_1(AY618702|pid:none) Danio rerio myosin VIa (myo6a) mRN... 307 1e-81
EU621675_1(EU621675|pid:none) Xenopus laevis laryngeal-specific ... 306 2e-81
AF111783_1(AF111783|pid:none) Homo sapiens myosin heavy chain II... 306 2e-81
AL596129_7(AL596129|pid:none) Mouse DNA sequence from clone RP23... 306 2e-81
(P13542) RecName: Full=Myosin-8; AltName: Full=Myosin heavy chai... 306 2e-81
(P13538) RecName: Full=Myosin heavy chain, skeletal muscle, adult; 306 2e-81
U87231_1(U87231|pid:none) Gallus gallus myosin heavy chain mRNA,... 306 2e-81
AC090483_5(AC090483|pid:none) Genomic sequence for Oryza sativa,... 306 3e-81
(P11055) RecName: Full=Myosin-3; AltName: Full=Myosin heavy chai... 306 3e-81
(Q9BE40) RecName: Full=Myosin-1; AltName: Full=Myosin heavy chai... 306 3e-81
S04090(S04090;S06146;S05442;S12460;S09333;A35082) myosin heavy c... 306 3e-81
BC150737_1(BC150737|pid:none) Mus musculus myosin, heavy polypep... 305 4e-81
BC149227_1(BC149227|pid:none) Bos taurus myosin, heavy chain 3, ... 305 4e-81
BC144917_1(BC144917|pid:none) Mus musculus myosin VI, mRNA (cDNA... 305 4e-81
(P13535) RecName: Full=Myosin-8; AltName: Full=Myosin heavy chai... 305 5e-81
M36769_1(M36769|pid:none) Homo sapiens perinatal myosin heavy ch... 305 5e-81
BC073455_1(BC073455|pid:none) Xenopus laevis hypothetical protei... 305 5e-81
U75357_1(U75357|pid:none) Schizosaccharomyces pombe myosin II (m... 305 5e-81
(Q9USI6) RecName: Full=Myosin type-2 heavy chain 1; AltName: Ful... 305 5e-81
(Q8MJU9) RecName: Full=Myosin-7; AltName: Full=Myosin heavy chai... 305 5e-81
DQ227287_1(DQ227287|pid:none) Canis familiaris masticatory myosi... 305 5e-81
AB014510_1(AB014510|pid:none) Mus musculus mRNA for myosin 15, p... 305 5e-81
I38055(I38055;JH0154;S12459;S09332;A30220;S49478) myosin heavy c... 305 5e-81
(Q8MJV1) RecName: Full=Myosin-2; AltName: Full=Myosin heavy chai... 305 6e-81
AL133324_8(AL133324|pid:none) Human DNA sequence from clone RP5-... 304 8e-81
BC075407_1(BC075407|pid:none) Xenopus tropicalis myosin, heavy p... 304 8e-81
(P14105) RecName: Full=Myosin-9; AltName: Full=Myosin heavy chai... 304 1e-80
FN392321_842(FN392321|pid:none) Pichia pastoris GS115 chromosome... 304 1e-80
AY116218_1(AY116218|pid:none) Gallus gallus fast myosin heavy ch... 304 1e-80
BC072844_1(BC072844|pid:none) Xenopus laevis hypothetical protei... 304 1e-80
M93676_4(M93676|pid:none) Chicken nonmuscle myosin heavy chain (... 304 1e-80
AB258222_1(AB258222|pid:none) Oryzias latipes gene for fast skel... 304 1e-80
(P12882) RecName: Full=Myosin-1; AltName: Full=Myosin heavy chai... 304 1e-80
AY913766_1(AY913766|pid:none) Xenopus laevis ventricular myosin ... 303 1e-80
U96726_3(U96726|pid:none) Mus musculus vibrator critical region,... 303 1e-80
BC054974_1(BC054974|pid:none) Xenopus laevis cDNA clone IMAGE:68... 303 1e-80
(Q9TV62) RecName: Full=Myosin-4; AltName: Full=Myosin heavy chai... 303 1e-80
BC121229_1(BC121229|pid:none) Xenopus tropicalis MYO6 protein, m... 303 1e-80
AP008208_2939(AP008208|pid:none) Oryza sativa (japonica cultivar... 303 1e-80
AL132825_1(AL132825|pid:none) Human DNA sequence from clone RP4-... 303 1e-80
(A7E2Y1) RecName: Full=Myosin-7B; AltName: Full=Myosin heavy cha... 303 1e-80
BC079965_1(BC079965|pid:none) Xenopus tropicalis MYO6 protein, m... 303 1e-80
BC076678_1(BC076678|pid:none) Xenopus tropicalis myosin, heavy p... 303 1e-80
BC026142_1(BC026142|pid:none) Mus musculus myosin, heavy polypep... 303 2e-80
(A2AQP0) RecName: Full=Myosin-7B; AltName: Full=Myosin heavy cha... 303 2e-80
AK303395_1(AK303395|pid:none) Homo sapiens cDNA FLJ61014 complet... 303 2e-80
(Q9TV63) RecName: Full=Myosin-2; AltName: Full=Myosin heavy chai... 303 2e-80
AK045074_1(AK045074|pid:none) Mus musculus 9.5 days embryo parth... 303 2e-80
AK052435_1(AK052435|pid:none) Mus musculus 13 days embryo lung c... 303 2e-80
AK147567_1(AK147567|pid:none) Mus musculus cDNA, RIKEN full-leng... 303 2e-80
AY520816_1(AY520816|pid:none) Homo sapiens smooth muscle myosin ... 303 2e-80
(Q27991) RecName: Full=Myosin-10; AltName: Full=Myosin heavy cha... 303 2e-80
DQ022376_1(DQ022376|pid:none) Danio rerio smooth muscle myosin h... 303 2e-80
(Q61879) RecName: Full=Myosin-10; AltName: Full=Myosin heavy cha... 303 2e-80
AY520817_1(AY520817|pid:none) Homo sapiens smooth muscle myosin ... 303 2e-80
(P35580) RecName: Full=Myosin-10; AltName: Full=Myosin heavy cha... 303 2e-80
A59252(A59252;B61231;G02055) myosin heavy chain, nonmuscle, form... 303 2e-80
EU367967_1(EU367967|pid:none) Ctenopharyngodon idella fast skele... 302 3e-80
BC162152_1(BC162152|pid:none) Danio rerio myosin, heavy polypept... 302 3e-80
(Q9BE39) RecName: Full=Myosin-7; AltName: Full=Myosin heavy chai... 302 4e-80
AJ243770_1(AJ243770|pid:none) Paracirrhites forsteri mRNA for fa... 302 4e-80
AB258225_1(AB258225|pid:none) Oryzias latipes gene for fast skel... 302 4e-80
BC067305_1(BC067305|pid:none) Xenopus tropicalis myosin heavy ch... 302 4e-80
CU928171_294(CU928171|pid:none) Kluyveromyces thermotolerans str... 302 4e-80
I51893(I51893) smooth muscle myosin heavy chain isoform SM1A - r... 301 5e-80
AB032020_1(AB032020|pid:none) Seriola dumerilii mRNA for myosin ... 301 5e-80
AP007167_368(AP007167|pid:none) Aspergillus oryzae RIB40 genomic... 301 5e-80
D89991_1(D89991|pid:none) Cyprinus carpio mRNA for myosin heavy ... 301 5e-80
AB057661_1(AB057661|pid:none) Gallus gallus myosin heavy chain m... 301 5e-80
(Q9BE41) RecName: Full=Myosin-2; AltName: Full=Myosin heavy chai... 301 5e-80
BC041716_1(BC041716|pid:none) Xenopus laevis similar to myosin, ... 301 7e-80
D85924_1(D85924|pid:none) Mus musculus mRNA for myosin, complete... 301 7e-80
(O08638) RecName: Full=Myosin-11; AltName: Full=Myosin heavy cha... 301 7e-80
EU241478_1(EU241478|pid:none) Rattus norvegicus myosin heavy cha... 301 7e-80
(Q28641) RecName: Full=Myosin-4; AltName: Full=Myosin heavy chai... 301 7e-80
BC044194_1(BC044194|pid:none) Danio rerio myosin heavy chain 4, ... 301 7e-80
AB275402_1(AB275402|pid:none) Saurida wanieso wMYH1 mRNA for myo... 301 9e-80
AF136711_1(AF136711|pid:none) Amoeba proteus myosin heavy chain ... 301 9e-80
AJ243769_1(AJ243769|pid:none) Notothenia coriiceps mRNA for slow... 301 9e-80
(P02563) RecName: Full=Myosin-6; AltName: Full=Myosin heavy chai... 301 9e-80
BC132667_1(BC132667|pid:none) Homo sapiens myosin, heavy chain 6... 301 9e-80
Z20656_1(Z20656|pid:none) Homo sapiens of cardiac alpha-myosin h... 301 9e-80
(Q076A5) RecName: Full=Myosin-4; AltName: Full=Myosin heavy chai... 301 9e-80
(P49824) RecName: Full=Myosin-7; AltName: Full=Myosin heavy chai... 300 1e-79
(P79293) RecName: Full=Myosin-7; AltName: Full=Myosin heavy chai... 300 1e-79
AB472675_1(AB472675|pid:none) Oryzias latipes mMYHL2 mRNA for my... 300 1e-79
BC072094_1(BC072094|pid:none) Xenopus laevis hypothetical protei... 300 1e-79
AE017343_653(AE017343|pid:none) Cryptococcus neoformans var. neo... 300 1e-79
AF212147_1(AF212147|pid:none) Oryctolagus cuniculus skeletal mus... 300 2e-79
(Q9JLT0) RecName: Full=Myosin-10; AltName: Full=Myosin heavy cha... 300 2e-79
AJ243767_1(AJ243767|pid:none) Notothenia coriiceps mRNA for fast... 300 2e-79
BC166736_1(BC166736|pid:none) Rattus norvegicus myosin, heavy ch... 300 2e-79
BC163721_1(BC163721|pid:none) Danio rerio slow myosin heavy chai... 300 2e-79
M93676_2(M93676|pid:none) Chicken nonmuscle myosin heavy chain (... 300 2e-79
AY921649_1(AY921649|pid:none) Danio rerio slow myosin heavy chai... 300 2e-79
AB004801_1(AB004801|pid:none) Gallus gallus mRNA for chick atria... 300 2e-79
AK041122_1(AK041122|pid:none) Mus musculus adult male aorta and ... 300 2e-79
DQ227281_1(DQ227281|pid:none) Canis familiaris fast myosin heavy... 300 2e-79
BC134998_1(BC134998|pid:none) Danio rerio slow myosin heavy chai... 300 2e-79
EF030714_1(EF030714|pid:none) Danio rerio slow myosin heavy chai... 300 2e-79
BC061145_1(BC061145|pid:none) Mus musculus myosin, heavy polypep... 299 3e-79
BC125821_1(BC125821|pid:none) Danio rerio myosin, heavy polypept... 299 3e-79
BC167941_1(BC167941|pid:none) Xenopus tropicalis cDNA clone IMAG... 299 3e-79
EU367968_1(EU367968|pid:none) Ctenopharyngodon idella fast skele... 299 3e-79
(P54696) RecName: Full=Myosin-H heavy chain; AltName: Full=Myosi... 299 3e-79
BC090979_1(BC090979|pid:none) Mus musculus myosin, heavy polypep... 299 3e-79
CT025533_3(CT025533|pid:none) Mouse DNA sequence from clone RP23... 299 3e-79
AF272033_1(AF272033|pid:none) Gallus gallus fast myosin heavy ch... 299 3e-79
(Q9UKX3) RecName: Full=Myosin-13; AltName: Full=Myosin heavy cha... 299 3e-79
CU530419_2(CU530419|pid:none) Zebrafish DNA sequence from clone ... 299 3e-79
AB303685_1(AB303685|pid:none) Hypophthalmichthys molitrix MYH sc... 299 3e-79
BX510649_10(BX510649|pid:none) Zebrafish DNA sequence from clone... 299 3e-79
M76598_1(M76598|pid:none) Mouse alpha cardiac myosin heavy chain... 299 3e-79
(Q9UKX2) RecName: Full=Myosin-2; AltName: Full=Myosin heavy chai... 298 4e-79
AB330141_1(AB330141|pid:none) Coryphaenoides acrolepis MyHC mRNA... 298 4e-79
BX510904_1(BX510904|pid:none) Homo sapiens mRNA; cDNA DKFZp451A1... 298 4e-79
(P13539) RecName: Full=Myosin-6; AltName: Full=Myosin heavy chai... 298 4e-79
EU115994_1(EU115994|pid:none) Danio rerio fast myosin heavy chai... 298 6e-79
AL596255_1(AL596255|pid:none) Mouse DNA sequence from clone RP23... 298 6e-79
A37102(A37102;S12733;A94224;B28908;A24997;A27858;I54254;) myosin... 298 6e-79
EU747717_1(EU747717|pid:none) Homo sapiens mutant cardiac muscle... 298 6e-79
AJ238393_1(AJ238393|pid:none) Homo sapiens MYH7 gene for beta-my... 298 6e-79
AB258224_1(AB258224|pid:none) Oryzias latipes gene for fast skel... 298 8e-79
AE014297_3656(AE014297|pid:none) Drosophila melanogaster chromos... 297 1e-78
BT004859_1(BT004859|pid:none) Drosophila melanogaster RE25996 fu... 297 1e-78
A44400(A44400;S28457) myosin heavy chain 95F - fruit fly (Drosop... 297 1e-78
AK299440_1(AK299440|pid:none) Homo sapiens cDNA FLJ51537 partial... 297 1e-78
CR382132_555(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 297 1e-78
(Q076A7) RecName: Full=Myosin-2; AltName: Full=Myosin heavy chai... 297 1e-78
BC163537_1(BC163537|pid:none) Danio rerio myosin, heavy polypept... 297 1e-78
M69180_1(M69180|pid:none) Human nonmuscle myosin heavy chain-A (... 297 1e-78
X52889_1(X52889|pid:none) Human gene for cardiac beta myosin hea... 297 1e-78
EU769112_1(EU769112|pid:none) Sander vitreus white muscle myosin... 297 1e-78
(Q076A3) RecName: Full=Myosin-13; AltName: Full=Myosin heavy cha... 297 1e-78
AF125462_4(AF125462|pid:none) Caenorhabditis elegans cosmid Y66H... 297 1e-78
BX510649_8(BX510649|pid:none) Zebrafish DNA sequence from clone ... 297 1e-78
BC095380_1(BC095380|pid:none) Danio rerio slow myosin heavy chai... 297 1e-78
I64833(I64833)smooth muscle myosin heavy chain isoform SM1B - ra... 296 2e-78
AB021180_1(AB021180|pid:none) Gallus gallus mRNA for skeletal my... 296 2e-78
AB017819_1(AB017819|pid:none) Theragra chalcogramma mRNA for myo... 296 2e-78
M76600_1(M76600|pid:none) Mouse alpha cardiac myosin heavy chain... 296 2e-78
BC008538_1(BC008538|pid:none) Mus musculus myosin, heavy polypep... 296 3e-78
AL596129_2(AL596129|pid:none) Mouse DNA sequence from clone RP23... 296 3e-78
T21174(T21174;T25113)hypothetical protein F20G4.3 - Caenorhabdit... 295 4e-78
BC155230_1(BC155230|pid:none) Danio rerio myosin, heavy polypept... 295 4e-78
U49263_1(U49263|pid:none) Caenorhabditis elegans non-muscle myos... 295 4e-78
Z75538_4(Z75538|pid:none) Caenorhabditis elegans Cosmid F20G4, c... 295 4e-78
L03534_1(L03534|pid:none) Entamoeba histolytica myosin heavy cha... 295 5e-78
(Q91Z83) RecName: Full=Myosin-7; AltName: Full=Myosin heavy chai... 295 6e-78
BC045050_1(BC045050|pid:none) Xenopus laevis myosin VA (heavy po... 295 6e-78
AK157742_1(AK157742|pid:none) Mus musculus 9.5 days embryo parth... 295 6e-78
AE014298_1594(AE014298|pid:none) Drosophila melanogaster chromos... 295 6e-78
BC110700_1(BC110700|pid:none) Mus musculus myosin, heavy polypep... 294 8e-78
BC057729_1(BC057729|pid:none) Xenopus laevis hypothetical protei... 294 1e-77
(P02564) RecName: Full=Myosin-7; AltName: Full=Myosin heavy chai... 293 2e-77
AB222080_1(AB222080|pid:none) Tetrahymena thermophila MYO9 mRNA ... 293 2e-77
BX927377_8(BX927377|pid:none) Zebrafish DNA sequence from clone ... 293 2e-77
BC166177_1(BC166177|pid:none) Xenopus tropicalis hypothetical pr... 293 2e-77
BC079699_1(BC079699|pid:none) Xenopus laevis cDNA clone IMAGE:55... 292 3e-77
BC060471_1(BC060471|pid:none) Xenopus laevis nonmuscle myosin II... 292 3e-77
BC170424_1(BC170424|pid:none) Xenopus laevis nonmuscle myosin II... 292 3e-77
BC047253_1(BC047253|pid:none) Xenopus laevis nonmuscle myosin II... 292 3e-77
AF240688_1(AF240688|pid:none) Rana pipiens type 1 myosin heavy c... 292 3e-77
AJ306290_1(AJ306290|pid:none) Toxocara canis partial mRNA for my... 292 3e-77
AL591462_1(AL591462|pid:none) Zebrafish DNA sequence from clone ... 291 5e-77
AF248485_1(AF248485|pid:none) Strongylocentrotus purpuratus myos... 291 7e-77
AF221131_1(AF221131|pid:none) Toxoplasma gondii myosin E mRNA, c... 291 9e-77
D89990_1(D89990|pid:none) Cyprinus carpio mRNA for myosin heavy ... 291 9e-77
(Q9Y2K3) RecName: Full=Myosin-15; AltName: Full=Myosin heavy cha... 290 1e-76
AF029788_1(AF029788|pid:none) Schizosaccharomyces pombe myosin-I... 290 1e-76
(P13540) RecName: Full=Myosin-7; AltName: Full=Myosin heavy chai... 290 2e-76
AM270131_7(AM270131|pid:none) Aspergillus niger contig An07c0130... 290 2e-76
AB264661_1(AB264661|pid:none) Papilio xuthus mRNA for muscle myo... 290 2e-76
AB126173_1(AB126173|pid:none) Lethenteron japonicum LjMyHC1 mRNA... 289 3e-76
BC172390_1(BC172390|pid:none) Synthetic construct Homo sapiens c... 289 4e-76
(Q9VJI3) RecName: Full=Myosin heavy chain, muscle; 288 5e-76
AJ249991_1(AJ249991|pid:none) Mytilus galloprovincialis partial ... 288 5e-76
AF240691_1(AF240691|pid:none) Rana pipiens type tonic myosin hea... 288 5e-76
T26467(T26467)hypothetical protein Y11D7A.14 - Caenorhabditis el... 288 5e-76
AL032632_14(AL032632|pid:none) Caenorhabditis elegans YAC Y11D7A... 288 5e-76
AB076182_1(AB076182|pid:none) Oncorhynchus keta mRNA for myosin ... 288 6e-76
AB222079_1(AB222079|pid:none) Tetrahymena thermophila MYO8 mRNA ... 288 6e-76
AE016816_272(AE016816|pid:none) Ashbya gossypii (= Eremothecium ... 288 6e-76
AE014134_2860(AE014134|pid:none) Drosophila melanogaster chromos... 286 2e-75

>(P42522) RecName: Full=Myosin IC heavy chain;
Length = 1182

Score = 1089 bits (2817), Expect = 0.0
Identities = 538/540 (99%), Positives = 538/540 (99%)
Frame = +1

Query: 4 MQYIADVSGERGSSSNQKVEHVKSIILETNPLLEAFGNAKTLRNNNSSRFGKYFEIQFNQ 183
MQYIADVSGERGSSSNQKVEHVKSIILETNPLLEAFGNAKTLRNNNSSRFGKYFEIQFNQ
Sbjct: 123 MQYIADVSGERGSSSNQKVEHVKSIILETNPLLEAFGNAKTLRNNNSSRFGKYFEIQFNQ 182

Query: 184 KNEPEGGKITNYLLEKSRVVFQLKSERNFHIFYQFCRGATPQEQQEFGIYGPENFAYLTK 363
KNEPEGGKITNYLLEKSRVVFQLK ERNFHIFYQFCRGATPQEQQEFGIYGPENFAYLTK
Sbjct: 183 KNEPEGGKITNYLLEKSRVVFQLKGERNFHIFYQFCRGATPQEQQEFGIYGPENFAYLTK 242

Query: 364 GDTLDIDGVDDVEXFALTRNAMNVIGIPANEQKQIFKLLAAILWIGNIDFKEQAGDKVTI 543
GDTLDIDGVDDVE FALTRNAMNVIGIPANEQKQIFKLLAAILWIGNIDFKEQAGDKVTI
Sbjct: 243 GDTLDIDGVDDVEEFALTRNAMNVIGIPANEQKQIFKLLAAILWIGNIDFKEQAGDKVTI 302

Query: 544 ADTSVLDFVSQLLDVPSHFLKTALEFRQMETRHGNQRGTQYNVPLNKTQAIAGRDALAKA 723
ADTSVLDFVSQLLDVPSHFLKTALEFRQMETRHGNQRGTQYNVPLNKTQAIAGRDALAKA
Sbjct: 303 ADTSVLDFVSQLLDVPSHFLKTALEFRQMETRHGNQRGTQYNVPLNKTQAIAGRDALAKA 362

Query: 724 IYDRLFNWLVDRINKEMDNPQKGLMIGVLDIYGFEVFDRNGFEQFCINYVNEKLQQIFIE 903
IYDRLFNWLVDRINKEMDNPQKGLMIGVLDIYGFEVFDRNGFEQFCINYVNEKLQQIFIE
Sbjct: 363 IYDRLFNWLVDRINKEMDNPQKGLMIGVLDIYGFEVFDRNGFEQFCINYVNEKLQQIFIE 422

Query: 904 FTLKMEQEEYVREGIKWEPIPFFDNKIVCELIEGKNPPGIFSILDDVCRAVHSQAEGADQ 1083
FTLKMEQEEYVREGIKWEPIPFFDNKIVCELIEGKNPPGIFSILDDVCRAVHSQAEGADQ
Sbjct: 423 FTLKMEQEEYVREGIKWEPIPFFDNKIVCELIEGKNPPGIFSILDDVCRAVHSQAEGADQ 482

Query: 1084 KLLQSIAVCKSNPHFDTRGNAFCVKHYAGDVVYEGPGMIEKNKDTLLKDHLEILQMSANN 1263
KLLQSIAVCKSNPHFDTRGNAFCVKHYAGDVVYEGPGMIEKNKDTLLKDHLEILQMSANN
Sbjct: 483 KLLQSIAVCKSNPHFDTRGNAFCVKHYAGDVVYEGPGMIEKNKDTLLKDHLEILQMSANN 542

Query: 1264 FLVGLFPDVIDTDSKKLPSTAGFKIKSQAAELVATLMKSTPHYIRTIKPNDLKKPNILEG 1443
FLVGLFPDVIDTDSKKLPSTAGFKIKSQAAELVATLMKSTPHYIRTIKPNDLKKPNILEG
Sbjct: 543 FLVGLFPDVIDTDSKKLPSTAGFKIKSQAAELVATLMKSTPHYIRTIKPNDLKKPNILEG 602

Query: 1444 GRVLHQVKYLGLLDNIKVRRAGFAYRATFDRFFQRYYLLSDKTCYAGNNIWKGDALSACR 1623
GRVLHQVKYLGLLDNIKVRRAGFAYRATFDRFFQRYYLLSDKTCYAGNNIWKGDALSACR
Sbjct: 603 GRVLHQVKYLGLLDNIKVRRAGFAYRATFDRFFQRYYLLSDKTCYAGNNIWKGDALSACR 662

Score = 227 bits (579), Expect = 1e-57
Identities = 136/247 (55%), Positives = 136/247 (55%), Gaps = 42/247 (17%)
Frame = +3

Query: 1647 DEMHKEIFXKKNQFHIASGLPASTTVAKVRKNPSQVSTPSKPIAKPVAKPMVAKPSGGSV 1826
DEMHKEIF KKNQFHIASGLPASTTVAKVRKNPSQVSTPSKPIAKPVAKPMVAKPSGGSV
Sbjct: 936 DEMHKEIFLKKNQFHIASGLPASTTVAKVRKNPSQVSTPSKPIAKPVAKPMVAKPSGGSV 995

Query: 1827 IMKKXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSA 2006
IMKK V SA
Sbjct: 996 IMKKPAPAAPPSGPPVMKKPAPTAPGGAPMMKKPAPAPGGAPMMKKPAPVPGGPAPGGSA 1055

Query: 2007 IMKPAGGVSKPLPS------------------------------------------PTGX 2060
IMKPAGGVSKPLPS P
Sbjct: 1056 IMKPAGGVSKPLPSPTGAPMMKKPAPTAPGGPAPAGAPTPMMKKPAGQPMMKPIAKPQPT 1115

Query: 2061 XXXXXXXXXXXXYIALYEYDAMQPDELTFKENDVINLIKKVDADWWQGELVRTKQIGMLP 2240
YIALYEYDAMQPDELTFKENDVINLIKKVDADWWQGELVRTKQIGMLP
Sbjct: 1116 PMKKPAAPPPQQYIALYEYDAMQPDELTFKENDVINLIKKVDADWWQGELVRTKQIGMLP 1175

Query: 2241 SNYVQQI 2261
SNYVQQI
Sbjct: 1176 SNYVQQI 1182

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 3,494,903,863
Number of extensions: 69794877
Number of successful extensions: 182392
Number of sequences better than 10.0: 2368
Number of HSP's gapped: 178250
Number of HSP's successfully gapped: 2914
Length of query: 759
Length of database: 1,051,180,864
Length adjustment: 136
Effective length of query: 623
Effective length of database: 611,008,840
Effective search space: 380658507320
Effective search space used: 380658507320
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.41 alm: 0.39 top: 0.53 tms: 0.00 mit: 0.09 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

52.0 %: cytoplasmic
28.0 %: nuclear
8.0 %: vesicles of secretory system
4.0 %: cytoskeletal
4.0 %: vacuolar
4.0 %: mitochondrial

>> prediction for Contig-U12409-1 is cyt

VS (DIR, S) 0
VH (FL, L) 5
VF (FL, S) 1
AH (FL, L) 1
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 1
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0