Contig-U12300-1
Contig ID Contig-U12300-1
Contig update 2002.12.18
Contig sequence
>Contig-U12300-1 (Contig-U12300-1Q) /CSM_Contig/Contig-U12300-1Q.Seq.d
TTGAAAGTAAATTAAGAAGTGAATTACAAAAATTAAAATTTGAATTAATT
ACCTTGATCAATCAAAAATCAGATTCAATTTATAATGAACAAAAAGAATA
TCAAAAACAAGAACGTCTTTTAAGAGAAGATGATAGAAAATATATAGAAA
CTTTAAAGATTTCAATTTTCTCATCATTAAAAGAGGCAAAGATTGAAAGA
GATCAATTATCCAATCAAATCAATTCATTATTACAAGATAATAAAACCAT
TCAAATCAATGCTGAACAAGCTGAACAATTGGCAAGCACAAAGAATGATC
AACTATTGAAAGCAAATGATGAATTGTTGGCACAATTGGAACAATCTAGA
AAACAACGTTTATTTGAAATTCAAGAATCAGAGAATAGATTCAAACAAGA
TAGAGAACAATTAATCAATGATCATAAACAACAAGAGAAATTAGAACAAC
AAAAGAGAGATCTCGAAGAGACTAGAATCATTGAACAATTGAAACAAGAG
TCGGAACAACGTAAAAAACAATATGAAGATCATTTGAAAGAAAGAGAATC
AGAGAGAGAGAAAGAGGTTCAACAATTATTATTAAAACAAAAAGAAGCTG
AACAATTAATTGAACAACAAAAACAAGATCAACAAAAGCTCAAACAAGAG
AGAGAACTTGAAATTCGTAAACAACAACAATTGGAACACCAATTGGAAGA
GGAGAGAAAACAAGAACAAAAGAAAAAGAAAGAATTGGATGATCAAGAAT
GGAAGAGAAAGGAACAACAATATCAATCTGATCTTCAATTGGAAAAAGAG
AAACAATCTGCATTAGAGTTGGAACGTGAACGTGAAATTCAATCAATTCT
TGAATCAGAGAAACAACGTCAACAACAAGTTGAACTTGAAATTCAACAAG
AAAAAGAAAGAACCAAACAATTACAACAACAATGGGAACAAGAGAAATTG
AAATTGGAAGAGGAAAGAAAAGAATTGGAAAATAAAAAATCATTGGAAAT
GGCTCAAAAGAAACAAGAACTATTAGAGTTAAATAAAAAGATTGAACAAG
AACAACGTGATCTAGAAGAACGTATTCAAAAAGAACAAAAAGAAAAAGAT
CAAAGAGAANAACAAGATCAATTGGCTCAAATGGNATTAGANAGAGAAAG
AGAAAGNGAAAANGAAGNAANNNAGAGANNACAGCAACAATGGGCTCAAT
TAGAAAAAGAAGAAANAGAAAGAAATGAANNACTTGAAAAAGATAGACAA
TTACAATTAGAACAAGAGAAATTGAAATTGGAAGAGGAAAGAAAAGAATT
GGAAAATAAANAATCATTGGAAATGGCTCAAAAGAAACAAGAACTATTAG
AGTTAAATAAAAAGATTGAACAAGAACAACGTGATCTAGAAGAACGTATT
CAAAAAGAACAAAAAGAAAAAGCATCAAAGAGAAAAACAAGATCAATTGG
CTCAAATGGAATTAGAAAGAGAAAGAGAAAGAGAAAAAGAAGAAAAAAAG
AGAAAACAACAACAATTGGCTCAATTAGAAAAAGAAGAAAGAGAAAGAAA
TGAAAAACTTGAAAAAGATAGACAATTACAATTAGAACAAGAAATTGAAA
AAGAAAGAAAATTAAAACAACAACAAAAAGAAAAAGAACAAAAAGAACAA
AAAGAAAAAAGAGAACAAAGAGAAAAAGAAGAAAAAGAAGAAAAAGATAA
AAAAGATAAAGAAGAAAAAGAAAAACAAGAATTAAAGAAAAAACAACAAC
AACAACAACAACAAAAAGAAAAAGAAAAACAAGAAAGAAAAGAAAAAGAA
GAAAGAGAAGAAAGAGAAAAAGAAGAAAGAGAAGAAAGAGAAGAAAGAGA
AGAAAAAGAAAGAGAATTAAAATTAAAACAACAAAAGAAACAAAAAGAAG
AAAAAGAAAAAGAACTAAAATTAAAACAACAAAAAGAACAAGAAGAAAGA
GAAGAAAAAGAAGAAAAATTAAGAGAAGAAAAAGAAAAACAAAGAAAACT
TGAAATTCAACAAGAAAAAGAAAGACAACAAAAAGAAAAAGCTGAAAAAT
TAGAAAAAGAAAAATTAGAAAAAGAAAAAGAAACAAAGAAAACAAGAGGT
GGTTCATTACCATCAGTTCCAGTCAAAAAACAACAACAAACTCAAAAAGA
TGATAGTGATGATTCATCTTCTGAAGATGAAAAACCAAAATCAGTTGTTG
----------TTGNATCATGTAANCCATCATTTGTAAAGAAACNACTNAA
ATAAACNACCAGAGACCAGAACCAGAAGAAGTTAAACCAATTGTAAAGAA
ATCAATTCAACCAAAATCAGATTTACAAGGGAATCCAGATGTTGAATGTG
ATTTATCCAAATCCAGAATTAAGACAAATTTGGTTAGATGTTAGAGATGA
TGAAACTAATACCAATTGGATGTTAATTGGTTATGGTGGTTATAAGAAAA
CTTTACAACCTTATGGATCAGGTTCAGGTGGTTTAAAGGAAATGTCAAAA
CATTTGAAAGAGGAGGTATTGTATGGTTATTTACGTGTTATCTATGGTGA
TTCCGATAGAAGTAAATTCATTTTCATCACCTATGTACCAGAATCATTAA
GTGGTATCGCCAAAGCCAAAGCTAATATGCATAAACCTCATGTTGATAAT
TTCTTTAAATATAATCATACTCAATTCCAAGTGATGTCAAATCGATGAAA
TCTCTGATGATATCATTCAACAATAGATTAAAACAAACTTCAGGTGCAAA
CTATGGTAAAGGTACCTCTCCAGATGATACAAGTAAAACTGAAAACCTTT
AAAGGTATCAAAGAGAATGCAAAAGTTTTCTATCAAGGTACTGAAAAGAA
AGGTAATTTCAGTAAAGGTGGTGGTGGCGGTGAAACTATCTCTTACAATA
AAGGTCCACTCTCTGTAACACCATTAAGTTTAACTGGTCGTGCTGGTATC
ACTGAAAAATATATTAAATCAGATGTTAGAACAAGACTAATAACAAAGAT
GATGAAGTATTTGTTCAAGCAAGAAAAGGTGCTAAATCTTCTTTAAATAA
AGAAAAAGATAATCATAGTAATAATAACAACACCACAACACAATCATCAT
CATCATCATCGTCATCATCAGCTGATAGATCAAAATCACCATTAACAGTT
GTTGTTAATGATGATAAATCTGAATCTGAAACTGAATCAACACCATCGAT
TCCATCAAAAGCAAATTTAAAACCAGTTTCAAAACGTTCAGCTACACCAA
CAAGTGATATAGATAGTACAAATAGTGAATCGGAATCAGTGGTTAAATCA
ACCACCAAAAAACCAAGTGCTGGTATAAACGCTGGTGGCAATGATAAACC
AGTATCAACTGGACCTGATAGATGTTTATCATGTCAAAAACTTGTTTATC
AAGCAGAGAAATTATCTGCTGATAATCGTATTTTCCATAAAAATTGTTTC
AAATGTTCAAGTTGTGGTTGTCAAATGAAATTAGGTAACTATGCTAGTAT
GGATCAAATTTATTTCTGTAAAAATTGTTTCAAAAAGAAATTTAAAGAAA
AAGGTAACTATTCTGAAGGTTTTGGTAAATTAAAACCACAACAACAATTT
AATTTGAAAAAGAGTGGTAGTGGTGGTAGTTCCAATGCTGATACAGATGA
TTCTGAAGATGAATTTCATCAAAGAGAAAAAGAACAACAACAAAAAGAAA
AGGATGAATTAAAGAAAAGACAAGAAAAACAATTAGAAAAAGAAAGACAA
CAAGAAAAACAACAACAATTAGAACAAAAAGAGAAAGATCAAAAAGAGAA
AGATCAAAAAGAAAAAGAACAAAAAGAAAAGGAACAAAAAGAAAAGGAAA
AAGCCAAAAAATTAAAACAACAAGAGCAAAAGGAAA

Gap gap included
Contig length 3876
Chromosome number (1..6, M) -
Chromosome length -
Start point -
End point -
Strand (PLUS/MINUS) -
Number of clones 25
Number of EST 37
Link to clone list U12300
List of clone(s)

est1=VHM360F,1,520
est2=VHC876F,14,540
est3=VHF146F,28,619
est4=VHO368F,106,714
est5=VHD202F,282,834
est6=VHG488F,340,912
est7=VHG667Z,340,764
est8=VHA330F,371,938
est9=VHJ690F,440,1007
est10=VFD839F,459,1014
est11=VHH315Z,465,1041
est12=SHB240Z,521,1226
est13=VHH115Z,723,1101
est14=VHH439Z,930,1457
est15=VSK260Z,963,1463
est16=VHD832F,1011,1554
est17=VHO529F,1135,1757
est18=VFM230F,1241,1858
est19=VFO565F,1339,1875
est20=VSH287Z,1373,1586
est21=VHF232Z,1451,1719
est22=CHH716Z,1876,2080
est23=VHC876Z,1921,2694
est24=VHA330Z,1988,2782
est25=VHD202Z,2432,3176
est26=VHF146Z,2660,3023
est27=VHO368Z,2682,3312
est28=VHF859Z,2707,3199
est29=VFO565Z,2711,3437
est30=VHK525Z,2755,3439
est31=VFD839Z,2756,3479
est32=VHM360Z,2758,3450
est33=VFD824Z,2788,3479
est34=VHO529Z,2848,3451
est35=VHD832Z,2858,3501
est36=VHJ690Z,2920,3446
est37=VHG488Z,2987,3552
Translated Amino Acid sequence
lkvn*evnykn*nln*lp*siknqiqfimnkkniknknvf*ekmieni*kl*rfqfshh*
krqrlkeinypiksihyykiikpfksmlnklnnwqaqrminy*kqmmncwhnwnnlennv
ylkfknqridsnkienn*smiinnkrn*nnkreiskrleslnn*nksrnnvknnmkii*k
kenqrerkrfnnyy*nkkklnn*lnnknkinkssnkrenlkfvnnnnwntnwkrrenknk
rkrknwmikngrernnninlifnwkkrnnlh*swnvnvkfnqflnqrnnvnnklnlkfnk
kkkepnnynnngnkrn*nwkrkeknwkiknhwkwlkrnkny*s*ikrlnknnvi*knvfk
knkkkkikexnkinwlkwx*xekekxkxkxxrxxsnngln*kkkkxkemxxlkkidnyn*
nkrn*nwkrkeknwkixnhwkwlkrnkny*s*ikrlnknnvi*KNVFKKNKKKKHQREKQ
DQLAQMELEREREREKEEKKRKQQQLAQLEKEERERNEKLEKDRQLQLEQEIEKERKLKQ
QQKEKEQKEQKEKREQREKEEKEEKDKKDKEEKEKQELKKKQQQQQQQKEKEKQERKEKE
EREEREKEEREEREEREEKERELKLKQQKKQKEEKEKELKLKQQKEQEEREEKEEKLREE
KEKQRKLEIQQEKERQQKEKAEKLEKEKLEKEKETKKTRGGSLPSVPVKKQQQTQKDDSD
DSSSEDEKPKSVV---

---XSCXPSFVKKXLK*ttrdqnqkklnql*rnqfnqnqiykgiqmlnviypnpelrqiw
ldvrddetntnwmligyggykktlqpygsgsgglkemskhlkeevlygylrviygdsdrs
kfifityvpeslsgiakakanmhkphvdnffkynhtqfqvmsnr*nl**yhstid*nklq
vqtmvkvplqmiqvklktfkgikenakvfyqgtekkgnfskgggggetisynkgplsvtp
lsltgragitekyiksdvrtrlitkmmkylfkqekvlnll*ikkkiiiviittpqhnhhh
hhrhhqlidqnhh*qlllmminlnlklnqhhrfhqkqi*nqfqnvqlhqqvi*ivqivnr
nqwlnqppknqvlv*tlvaminqyqldlidvyhvknlfikqrnylliivfsikivsnvqv
vvvk*n*vtmlvwikfisvkivskrnlkkkvtilkvlvn*nhnnnli*krvvvvvvpmli
qmilkmnfikekknnnkkkrmn*rkdkknn*kkkdnkknnnn*nkkrkikkrkikkkknk
kkrnkkkrkkpkn*nnkskrk


Translated Amino Acid sequence (All Frames)
Frame A:
lkvn*evnykn*nln*lp*siknqiqfimnkkniknknvf*ekmieni*kl*rfqfshh*
krqrlkeinypiksihyykiikpfksmlnklnnwqaqrminy*kqmmncwhnwnnlennv
ylkfknqridsnkienn*smiinnkrn*nnkreiskrleslnn*nksrnnvknnmkii*k
kenqrerkrfnnyy*nkkklnn*lnnknkinkssnkrenlkfvnnnnwntnwkrrenknk
rkrknwmikngrernnninlifnwkkrnnlh*swnvnvkfnqflnqrnnvnnklnlkfnk
kkkepnnynnngnkrn*nwkrkeknwkiknhwkwlkrnkny*s*ikrlnknnvi*knvfk
knkkkkikexnkinwlkwx*xekekxkxkxxrxxsnngln*kkkkxkemxxlkkidnyn*
nkrn*nwkrkeknwkixnhwkwlkrnkny*s*ikrlnknnvi*KNVFKKNKKKKHQREKQ
DQLAQMELEREREREKEEKKRKQQQLAQLEKEERERNEKLEKDRQLQLEQEIEKERKLKQ
QQKEKEQKEQKEKREQREKEEKEEKDKKDKEEKEKQELKKKQQQQQQQKEKEKQERKEKE
EREEREKEEREEREEREEKERELKLKQQKKQKEEKEKELKLKQQKEQEEREEKEEKLREE
KEKQRKLEIQQEKERQQKEKAEKLEKEKLEKEKETKKTRGGSLPSVPVKKQQQTQKDDSD
DSSSEDEKPKSVV---

---lxhvxhhl*rnxxnkxpetrtrrs*tnckeinstkirftresrc*m*fiqiqn*dkf
g*mlemmklipigc*lvmvvirklynlmdqvqvv*rkcqni*krrycmviyvlsmvipie
vnsfsspmyqnh*vvspkpklicinlmliislniiilnsk*cqideisddiiqq*iktnf
rcklw*rylsr*yk*n*kplkvskrmqkfsikvlkrkvisvkvvvavklsltikvhsl*h
h*v*lvvlvslknilnqmleqd**qr**sicsskkrc*iffk*rkr*s****qhhntiii
iiiviis**ikitinscc****i*i*n*intidsikskfktsfktfsytnk*yr*yk**i
gisg*inhqktkcwykrwwq**tsinwt**mfimsktclssreiic**syfp*klfqmfk
lwlsneir*lc*ygsnlfl*klfqkei*rkr*lf*rfw*iktttti*fekew*ww*fqc*
yr*f*r*isskrkrtttkrkg*ikektrktirkrkttrktttirtkrerskrerskrkrt
krkgtkrkgksqkikttrakg

Frame B:
*k*ikk*itkiki*inyldqskirfnl**tkrisktrtsfkrr**kiyrnfkdfnfliik
rgkd*krsiiqsnqfiitr**nhsnqc*ts*tigkhke*stiesk**ivgtigti*kttf
i*nsrire*iqtr*rtinq*s*ttreirttkersrrd*nh*tietrvgtt*kti*rsfer
krirerergstiiiktkrs*tin*ttktrstkaqtrert*ns*tttigtpigrgektrtk
ekerig*srmeekgttisi*ssigkreticirvgt*t*nsins*irettstts*t*nstr
krknqtitttmgtreieigrgkkrigk*kiigngsketrtirvk*kd*trtt*srrtysk
rtkrkrskrxtrsigsngirxrkrkxkxxxxextatmgsirkrrxrkk*xt*kr*titir
treieigrgkkrigk*xiigngsketrtirvk*kd*trtt*srrtyskrtkrksikeknk
inwlkwn*kekekekkkkkrennnnwln*kkkkekemknlkkidnyn*nkklkkken*nn
nkkkknkknkkkkenkekkkkkkkkikkikkkkknkn*rknnnnnnnkkkkknkkekkkk
kekkekkkkekkekkekkkken*n*nnkrnkkkkkkkn*n*nnkknkkkekkkkkn*ekk
kknkenlkfnkkkkdnkkkklkn*kkkn*kkkkkqrkqevvhyhqfqsknnnklkkmivm
ihllkmknqnqll---

---xim*xiickettxinxqrpepeevkpivkksiqpksdlqgnpdvecdlsksriktnl
vrc*r**n*yqldvnwlwwl*enfttlwirfrwfkgnvktferggivwlftcylw*fr*k
*ihfhhlctriikwyrqsqs*ya*tsc**fl*i*sysipsdvksmkslmisfnnrlkqts
ganygkgtspddtsktenl*ryqrecksflsry*ker*fq*rwwwr*nyllq*rstlcnt
ikfnwscwyh*kiy*irc*nktnnkddevfvqarkgaksslnkekdnhsnnnntttqsss
ssssssadrskspltvvvnddksesetestpsipskanlkpvskrsatptsdidstnses
esvvksttkkpsaginaggndkpvstgpdrclscqklvyqaeklsadnrifhkncfkcss
cgcqmklgnyasmdqiyfckncfkkkfkekgnysegfgklkpqqqfnlkksgsggssnad
tddsedefhqrekeqqqkekdelkkrqekqlekerqqekqqqleqkekdqkekdqkekeq
kekeqkekekakklkqqeqke

Frame C:
esklrselqklkfelitlinqksdsiyneqkeyqkqerllreddrkyietlkisifsslk
eakierdqlsnqinsllqdnktiqinaeqaeqlastkndqllkandellaqleqsrkqrl
feiqesenrfkqdreqlindhkqqekleqqkrdleetriieqlkqeseqrkkqyedhlke
reserekevqqlllkqkeaeqlieqqkqdqqklkqereleirkqqqlehqleeerkqeqk
kkkelddqewkrkeqqyqsdlqlekekqsalelerereiqsilesekqrqqqveleiqqe
kertkqlqqqweqeklkleeerkelenkkslemaqkkqellelnkkieqeqrdleeriqk
eqkekdqrexqdqlaqmxlxrerexexexxxrxqqqwaqlekeexernexlekdrqlqle
qeklkleeerkelenkxslemaqkkqellelnkkieqeqrdleeriqkeqkekaskrktr
sigsngirkrkrkrkrrkkektttigsirkrrkrkk*kt*kr*titirtrn*krkkiktt
tkrkrtkrtkrkkrtkrkrrkrrkr*kr*rrkrktrikektttttttkrkrktrkkrkrr
krrkrkrrkrrkrrkrrkrkrikikttketkrrkrkrtkikttkrtrrkrrkrrkikrrk
rktkkt*nstrkrkttkrks*kirkrkirkrkrnkenkrwfitisssqktttnskr****
fif*r*ktkisc---

---XSCXPSFVKKXLK*ttrdqnqkklnql*rnqfnqnqiykgiqmlnviypnpelrqiw
ldvrddetntnwmligyggykktlqpygsgsgglkemskhlkeevlygylrviygdsdrs
kfifityvpeslsgiakakanmhkphvdnffkynhtqfqvmsnr*nl**yhstid*nklq
vqtmvkvplqmiqvklktfkgikenakvfyqgtekkgnfskgggggetisynkgplsvtp
lsltgragitekyiksdvrtrlitkmmkylfkqekvlnll*ikkkiiiviittpqhnhhh
hhrhhqlidqnhh*qlllmminlnlklnqhhrfhqkqi*nqfqnvqlhqqvi*ivqivnr
nqwlnqppknqvlv*tlvaminqyqldlidvyhvknlfikqrnylliivfsikivsnvqv
vvvk*n*vtmlvwikfisvkivskrnlkkkvtilkvlvn*nhnnnli*krvvvvvvpmli
qmilkmnfikekknnnkkkrmn*rkdkknn*kkkdnkknnnn*nkkrkikkrkikkkknk
kkrnkkkrkkpkn*nnkskrk

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U12300-1 (Contig-U12300-1Q)
/CSM_Contig/Contig-U12300-1Q.Seq.d
(3886 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U12300-1 (Contig-U12300-1Q) /CSM_Contig/Conti... 1782 0.0
Contig-U13720-1 (Contig-U13720-1Q) /CSM_Contig/Conti... 256 2e-67
Contig-U05289-1 (Contig-U05289-1Q) /CSM_Contig/Conti... 48 7e-05
Contig-U12528-1 (Contig-U12528-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U06960-1 (Contig-U06960-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U07084-1 (Contig-U07084-1Q) /CSM_Contig/Conti... 42 0.004
Contig-U12177-1 (Contig-U12177-1Q) /CSM_Contig/Conti... 40 0.018
Contig-U10870-1 (Contig-U10870-1Q) /CSM_Contig/Conti... 40 0.018
Contig-U09686-1 (Contig-U09686-1Q) /CSM_Contig/Conti... 40 0.018
Contig-U00906-1 (Contig-U00906-1Q) /CSM_Contig/Conti... 40 0.018

>Contig-U12300-1 (Contig-U12300-1Q) /CSM_Contig/Contig-U12300-1Q.Seq.d
Length = 3886

Score = 1782 bits (899), Expect = 0.0
Identities = 944/944 (100%)
Strand = Plus / Plus


Query: 2149 gatgatagtgatgattcatcttctgaagatgaaaaaccaaaatcagttgttgnnnnnnnn 2208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2149 gatgatagtgatgattcatcttctgaagatgaaaaaccaaaatcagttgttgnnnnnnnn 2208


Query: 2209 nnttgnatcatgtaanccatcatttgtaaagaaacnactnaaataaacnaccagagacca 2268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2209 nnttgnatcatgtaanccatcatttgtaaagaaacnactnaaataaacnaccagagacca 2268


Query: 2269 gaaccagaagaagttaaaccaattgtaaagaaatcaattcaaccaaaatcagatttacaa 2328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2269 gaaccagaagaagttaaaccaattgtaaagaaatcaattcaaccaaaatcagatttacaa 2328


Query: 2329 gggaatccagatgttgaatgtgatttatccaaatccagaattaagacaaatttggttaga 2388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2329 gggaatccagatgttgaatgtgatttatccaaatccagaattaagacaaatttggttaga 2388


Query: 2389 tgttagagatgatgaaactaataccaattggatgttaattggttatggtggttataagaa 2448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2389 tgttagagatgatgaaactaataccaattggatgttaattggttatggtggttataagaa 2448


Query: 2449 aactttacaaccttatggatcaggttcaggtggtttaaaggaaatgtcaaaacatttgaa 2508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2449 aactttacaaccttatggatcaggttcaggtggtttaaaggaaatgtcaaaacatttgaa 2508


Query: 2509 agaggaggtattgtatggttatttacgtgttatctatggtgattccgatagaagtaaatt 2568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2509 agaggaggtattgtatggttatttacgtgttatctatggtgattccgatagaagtaaatt 2568


Query: 2569 cattttcatcacctatgtaccagaatcattaagtggtatcgccaaagccaaagctaatat 2628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2569 cattttcatcacctatgtaccagaatcattaagtggtatcgccaaagccaaagctaatat 2628


Query: 2629 gcataaacctcatgttgataatttctttaaatataatcatactcaattccaagtgatgtc 2688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2629 gcataaacctcatgttgataatttctttaaatataatcatactcaattccaagtgatgtc 2688


Query: 2689 aaatcgatgaaatctctgatgatatcattcaacaatagattaaaacaaacttcaggtgca 2748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2689 aaatcgatgaaatctctgatgatatcattcaacaatagattaaaacaaacttcaggtgca 2748


Query: 2749 aactatggtaaaggtacctctccagatgatacaagtaaaactgaaaacctttaaaggtat 2808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2749 aactatggtaaaggtacctctccagatgatacaagtaaaactgaaaacctttaaaggtat 2808


Query: 2809 caaagagaatgcaaaagttttctatcaaggtactgaaaagaaaggtaatttcagtaaagg 2868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2809 caaagagaatgcaaaagttttctatcaaggtactgaaaagaaaggtaatttcagtaaagg 2868


Query: 2869 tggtggtggcggtgaaactatctcttacaataaaggtccactctctgtaacaccattaag 2928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2869 tggtggtggcggtgaaactatctcttacaataaaggtccactctctgtaacaccattaag 2928


Query: 2929 tttaactggtcgtgctggtatcactgaaaaatatattaaatcagatgttagaacaagact 2988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2929 tttaactggtcgtgctggtatcactgaaaaatatattaaatcagatgttagaacaagact 2988


Query: 2989 aataacaaagatgatgaagtatttgttcaagcaagaaaaggtgctaaatcttctttaaat 3048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2989 aataacaaagatgatgaagtatttgttcaagcaagaaaaggtgctaaatcttctttaaat 3048


Query: 3049 aaagaaaaagataatcatagtaataataacaacaccacaacaca 3092
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3049 aaagaaaaagataatcatagtaataataacaacaccacaacaca 3092


Score = 1088 bits (549), Expect = 0.0
Identities = 549/549 (100%)
Strand = Plus / Plus


Query: 3121 gctgatagatcaaaatcaccattaacagttgttgttaatgatgataaatctgaatctgaa 3180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3121 gctgatagatcaaaatcaccattaacagttgttgttaatgatgataaatctgaatctgaa 3180


Query: 3181 actgaatcaacaccatcgattccatcaaaagcaaatttaaaaccagtttcaaaacgttca 3240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3181 actgaatcaacaccatcgattccatcaaaagcaaatttaaaaccagtttcaaaacgttca 3240


Query: 3241 gctacaccaacaagtgatatagatagtacaaatagtgaatcggaatcagtggttaaatca 3300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3241 gctacaccaacaagtgatatagatagtacaaatagtgaatcggaatcagtggttaaatca 3300


Query: 3301 accaccaaaaaaccaagtgctggtataaacgctggtggcaatgataaaccagtatcaact 3360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3301 accaccaaaaaaccaagtgctggtataaacgctggtggcaatgataaaccagtatcaact 3360


Query: 3361 ggacctgatagatgtttatcatgtcaaaaacttgtttatcaagcagagaaattatctgct 3420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3361 ggacctgatagatgtttatcatgtcaaaaacttgtttatcaagcagagaaattatctgct 3420


Query: 3421 gataatcgtattttccataaaaattgtttcaaatgttcaagttgtggttgtcaaatgaaa 3480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3421 gataatcgtattttccataaaaattgtttcaaatgttcaagttgtggttgtcaaatgaaa 3480


Query: 3481 ttaggtaactatgctagtatggatcaaatttatttctgtaaaaattgtttcaaaaagaaa 3540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3481 ttaggtaactatgctagtatggatcaaatttatttctgtaaaaattgtttcaaaaagaaa 3540


Query: 3541 tttaaagaaaaaggtaactattctgaaggttttggtaaattaaaaccacaacaacaattt 3600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3541 tttaaagaaaaaggtaactattctgaaggttttggtaaattaaaaccacaacaacaattt 3600


Query: 3601 aatttgaaaaagagtggtagtggtggtagttccaatgctgatacagatgattctgaagat 3660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3601 aatttgaaaaagagtggtagtggtggtagttccaatgctgatacagatgattctgaagat 3660


Query: 3661 gaatttcat 3669
|||||||||
Sbjct: 3661 gaatttcat 3669


Score = 1061 bits (535), Expect = 0.0
Identities = 535/535 (100%)
Strand = Plus / Plus


Query: 1 ttgaaagtaaattaagaagtgaattacaaaaattaaaatttgaattaattaccttgatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgaaagtaaattaagaagtgaattacaaaaattaaaatttgaattaattaccttgatca 60


Query: 61 atcaaaaatcagattcaatttataatgaacaaaaagaatatcaaaaacaagaacgtcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcaaaaatcagattcaatttataatgaacaaaaagaatatcaaaaacaagaacgtcttt 120


Query: 121 taagagaagatgatagaaaatatatagaaactttaaagatttcaattttctcatcattaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taagagaagatgatagaaaatatatagaaactttaaagatttcaattttctcatcattaa 180


Query: 181 aagaggcaaagattgaaagagatcaattatccaatcaaatcaattcattattacaagata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagaggcaaagattgaaagagatcaattatccaatcaaatcaattcattattacaagata 240


Query: 241 ataaaaccattcaaatcaatgctgaacaagctgaacaattggcaagcacaaagaatgatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ataaaaccattcaaatcaatgctgaacaagctgaacaattggcaagcacaaagaatgatc 300


Query: 301 aactattgaaagcaaatgatgaattgttggcacaattggaacaatctagaaaacaacgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aactattgaaagcaaatgatgaattgttggcacaattggaacaatctagaaaacaacgtt 360


Query: 361 tatttgaaattcaagaatcagagaatagattcaaacaagatagagaacaattaatcaatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tatttgaaattcaagaatcagagaatagattcaaacaagatagagaacaattaatcaatg 420


Query: 421 atcataaacaacaagagaaattagaacaacaaaagagagatctcgaagagactagaatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atcataaacaacaagagaaattagaacaacaaaagagagatctcgaagagactagaatca 480


Query: 481 ttgaacaattgaaacaagagtcggaacaacgtaaaaaacaatatgaagatcattt 535
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttgaacaattgaaacaagagtcggaacaacgtaaaaaacaatatgaagatcattt 535


Score = 337 bits (170), Expect = 5e-92
Identities = 170/170 (100%)
Strand = Plus / Plus


Query: 765 caacaatatcaatctgatcttcaattggaaaaagagaaacaatctgcattagagttggaa 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 caacaatatcaatctgatcttcaattggaaaaagagaaacaatctgcattagagttggaa 824


Query: 825 cgtgaacgtgaaattcaatcaattcttgaatcagagaaacaacgtcaacaacaagttgaa 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 cgtgaacgtgaaattcaatcaattcttgaatcagagaaacaacgtcaacaacaagttgaa 884


Query: 885 cttgaaattcaacaagaaaaagaaagaaccaaacaattacaacaacaatg 934
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 cttgaaattcaacaagaaaaagaaagaaccaaacaattacaacaacaatg 934


Score = 256 bits (129), Expect = 2e-67
Identities = 129/129 (100%)
Strand = Plus / Plus


Query: 567 gttcaacaattattattaaaacaaaaagaagctgaacaattaattgaacaacaaaaacaa 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gttcaacaattattattaaaacaaaaagaagctgaacaattaattgaacaacaaaaacaa 626


Query: 627 gatcaacaaaagctcaaacaagagagagaacttgaaattcgtaaacaacaacaattggaa 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gatcaacaaaagctcaaacaagagagagaacttgaaattcgtaaacaacaacaattggaa 686


Query: 687 caccaattg 695
|||||||||
Sbjct: 687 caccaattg 695


Score = 113 bits (57), Expect = 1e-24
Identities = 57/57 (100%)
Strand = Plus / Plus


Query: 1344 ctattagagttaaataaaaagattgaacaagaacaacgtgatctagaagaacgtatt 1400
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 ctattagagttaaataaaaagattgaacaagaacaacgtgatctagaagaacgtatt 1076


Score = 113 bits (57), Expect = 1e-24
Identities = 57/57 (100%)
Strand = Plus / Plus


Query: 1344 ctattagagttaaataaaaagattgaacaagaacaacgtgatctagaagaacgtatt 1400
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1344 ctattagagttaaataaaaagattgaacaagaacaacgtgatctagaagaacgtatt 1400


Score = 107 bits (54), Expect = 9e-23
Identities = 84/84 (100%)
Strand = Plus / Plus


Query: 1118 tcaattggctcaaatggnattaganagagaaagagaaagngaaaangaagnaannnagag 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1118 tcaattggctcaaatggnattaganagagaaagagaaagngaaaangaagnaannnagag 1177


Query: 1178 annacagcaacaatgggctcaatt 1201
||||||||||||||||||||||||
Sbjct: 1178 annacagcaacaatgggctcaatt 1201


Score = 99.6 bits (50), Expect = 2e-20
Identities = 50/50 (100%)
Strand = Plus / Plus


Query: 1014 caagaactattagagttaaataaaaagattgaacaagaacaacgtgatct 1063
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 caagaactattagagttaaataaaaagattgaacaagaacaacgtgatct 1063


Score = 99.6 bits (50), Expect = 2e-20
Identities = 50/50 (100%)
Strand = Plus / Plus


Query: 1014 caagaactattagagttaaataaaaagattgaacaagaacaacgtgatct 1063
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1338 caagaactattagagttaaataaaaagattgaacaagaacaacgtgatct 1387


Score = 91.7 bits (46), Expect = 5e-18
Identities = 72/84 (85%)
Strand = Plus / Plus


Query: 1118 tcaattggctcaaatggnattaganagagaaagagaaagngaaaangaagnaannnagag 1177
||||||||||||||||| |||||| |||||||||||||| ||||| |||| || ||||
Sbjct: 1443 tcaattggctcaaatggaattagaaagagaaagagaaagagaaaaagaagaaaaaaagag 1502


Query: 1178 annacagcaacaatgggctcaatt 1201
| ||| ||||||| |||||||||
Sbjct: 1503 aaaacaacaacaattggctcaatt 1526


Score = 73.8 bits (37), Expect = 1e-12
Identities = 37/37 (100%)
Strand = Plus / Plus


Query: 1244 tagacaattacaattagaacaagagaaattgaaattg 1280
|||||||||||||||||||||||||||||||||||||
Sbjct: 1244 tagacaattacaattagaacaagagaaattgaaattg 1280


Score = 61.9 bits (31), Expect = 5e-09
Identities = 31/31 (100%)
Strand = Plus / Plus


Query: 2093 caagaggtggttcattaccatcagttccagt 2123
|||||||||||||||||||||||||||||||
Sbjct: 2093 caagaggtggttcattaccatcagttccagt 2123


Score = 58.0 bits (29), Expect = 8e-08
Identities = 29/29 (100%)
Strand = Plus / Plus


Query: 883 aacttgaaattcaacaagaaaaagaaaga 911
|||||||||||||||||||||||||||||
Sbjct: 1997 aacttgaaattcaacaagaaaaagaaaga 2025


Score = 52.0 bits (26), Expect = 5e-06
Identities = 26/26 (100%)
Strand = Plus / Plus


Query: 1438 caagatcaattggctcaaatggaatt 1463
||||||||||||||||||||||||||
Sbjct: 1438 caagatcaattggctcaaatggaatt 1463


Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Plus


Query: 1244 tagacaattacaattagaacaaga 1267
||||||||||||||||||||||||
Sbjct: 1569 tagacaattacaattagaacaaga 1592


Score = 46.1 bits (23), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus


Query: 1438 caagatcaattggctcaaatggaatt 1463
|||||||||||||||||||||| |||
Sbjct: 1113 caagatcaattggctcaaatggnatt 1138


Score = 42.1 bits (21), Expect = 0.004
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 1260 gaacaagagaaattgaaattg 1280
|||||||||||||||||||||
Sbjct: 936 gaacaagagaaattgaaattg 956


Score = 40.1 bits (20), Expect = 0.018
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 1507 caacaacaattggctcaatt 1526
||||||||||||||||||||
Sbjct: 1507 caacaacaattggctcaatt 1526


Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 669 aaacaacaacaattgg 684
||||||||||||||||
Sbjct: 1504 aaacaacaacaattgg 1519


Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 669 aaacaacaacaattggaaca 688
|||||||||||||| |||||
Sbjct: 3757 aaacaacaacaattagaaca 3776


>Contig-U13720-1 (Contig-U13720-1Q) /CSM_Contig/Contig-U13720-1Q.Seq.d
Length = 558

Score = 256 bits (129), Expect = 2e-67
Identities = 129/129 (100%)
Strand = Plus / Plus


Query: 567 gttcaacaattattattaaaacaaaaagaagctgaacaattaattgaacaacaaaaacaa 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 gttcaacaattattattaaaacaaaaagaagctgaacaattaattgaacaacaaaaacaa 135


Query: 627 gatcaacaaaagctcaaacaagagagagaacttgaaattcgtaaacaacaacaattggaa 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 gatcaacaaaagctcaaacaagagagagaacttgaaattcgtaaacaacaacaattggaa 195


Query: 687 caccaattg 695
|||||||||
Sbjct: 196 caccaattg 204


Score = 87.7 bits (44), Expect = 8e-17
Identities = 44/44 (100%)
Strand = Plus / Plus


Query: 492 aaacaagagtcggaacaacgtaaaaaacaatatgaagatcattt 535
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaacaagagtcggaacaacgtaaaaaacaatatgaagatcattt 44


Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus


Query: 765 caacaatatcaatctgatcttcaattggaaaaaga 799
||||||||||||||||||| |||||| ||||||||
Sbjct: 274 caacaatatcaatctgatcctcaattagaaaaaga 308


Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Plus


Query: 1244 tagacaattacaattagaacaaga 1267
||||||||||||||||||||||||
Sbjct: 342 tagacaattacaattagaacaaga 365


>Contig-U05289-1 (Contig-U05289-1Q) /CSM_Contig/Contig-U05289-1Q.Seq.d
Length = 473

Score = 48.1 bits (24), Expect = 7e-05
Identities = 39/44 (88%)
Strand = Plus / Plus


Query: 3550 aaaggtaactattctgaaggttttggtaaattaaaaccacaaca 3593
|||||||| || ||||||||||||||| || | |||||||||||
Sbjct: 325 aaaggtaattactctgaaggttttggtcaactcaaaccacaaca 368


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 58,320
Number of Sequences: 6905
Number of extensions: 58320
Number of successful extensions: 7550
Number of sequences better than 10.0: 383
length of query: 3886
length of database: 5,674,871
effective HSP length: 17
effective length of query: 3869
effective length of database: 5,557,486
effective search space: 21501913334
effective search space used: 21501913334
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2008.11.30
Homology vs DNA
Query= Contig-U12300-1 (Contig-U12300-1Q) /CSM_Contig/Contig-U12300-1Q.Seq.d
(3886 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ419674) Dictyostelium discoideum cDNA clone:ddv36h20, 5' ... 1035 0.0 1
(BJ425397) Dictyostelium discoideum cDNA clone:ddv55h15, 5' ... 1031 0.0 1
(BJ436510) Dictyostelium discoideum cDNA clone:ddv31l07, 3' ... 848 0.0 2
(BJ445483) Dictyostelium discoideum cDNA clone:ddv59h17, 3' ... 791 0.0 4
(BJ436232) Dictyostelium discoideum cDNA clone:ddv30a17, 3' ... 791 0.0 3
(BJ438462) Dictyostelium discoideum cDNA clone:ddv37c02, 3' ... 690 0.0 4
(BJ438248) Dictyostelium discoideum cDNA clone:ddv36h20, 3' ... 660 0.0 7
(BJ430714) Dictyostelium discoideum cDNA clone:ddv8n10, 3' e... 791 0.0 2
(BJ444200) Dictyostelium discoideum cDNA clone:ddv55h15, 3' ... 791 0.0 2
(BJ443206) Dictyostelium discoideum cDNA clone:ddv52a07, 3' ... 791 0.0 2
(BJ421006) Dictyostelium discoideum cDNA clone:ddv41k11, 5' ... 991 0.0 1
(BJ430668) Dictyostelium discoideum cDNA clone:ddv8p06, 3' e... 769 0.0 2
(BJ445702) Dictyostelium discoideum cDNA clone:ddv60i07, 3' ... 668 0.0 2
(BJ426608) Dictyostelium discoideum cDNA clone:ddv59h17, 5' ... 852 0.0 1
(BJ438782) Dictyostelium discoideum cDNA clone:ddv38p08, 3' ... 636 0.0 2
(BJ440077) Dictyostelium discoideum cDNA clone:ddv42f16, 3' ... 779 0.0 2
(BJ442719) Dictyostelium discoideum cDNA clone:ddv50c24, 3' ... 519 0.0 2
(BJ440528) Dictyostelium discoideum cDNA clone:ddv43p22, 3' ... 392 e-165 2
(BJ439726) Dictyostelium discoideum cDNA clone:ddv41k11, 3' ... 222 e-147 3
(BJ421826) Dictyostelium discoideum cDNA clone:ddv43p22, 5' ... 389 e-143 2
(BJ419728) Dictyostelium discoideum cDNA clone:ddv37c02, 5' ... 500 e-136 1
(BJ418024) Dictyostelium discoideum cDNA clone:ddv31l07, 5' ... 307 e-129 2
(BJ440727) Dictyostelium discoideum cDNA clone:ddv44e18, 3' ... 389 e-103 1
(BJ423900) Dictyostelium discoideum cDNA clone:ddv50c24, 5' ... 196 8e-94 2
(BJ412432) Dictyostelium discoideum cDNA clone:ddv8n10, 5' e... 196 2e-82 2
(BJ380157) Dictyostelium discoideum cDNA clone:ddc37p03, 3' ... 240 7e-82 2
(BJ440940) Dictyostelium discoideum cDNA clone:ddv45n03, 3' ... 196 6e-79 2
(BJ440934) Dictyostelium discoideum cDNA clone:ddv45m03, 3' ... 196 2e-71 2
(BJ403836) Dictyostelium discoideum cDNA clone:dds26o10, 3' ... 196 1e-70 3
(BJ417399) Dictyostelium discoideum cDNA clone:ddv30a17, 5' ... 101 4e-30 4
(BJ441019) Dictyostelium discoideum cDNA clone:ddv45n10, 3' ... 115 1e-29 4
(BJ420171) Dictyostelium discoideum cDNA clone:ddv38p08, 5' ... 115 1e-20 1
(BJ416228) Dictyostelium discoideum cDNA clone:ddv25k08, 5' ... 68 4e-20 4
(BJ424371) Dictyostelium discoideum cDNA clone:ddv52a07, 5' ... 88 2e-17 3
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 36 3e-04 23
(AE016827) Mannheimia succiniciproducens MBEL55E, complete g... 54 0.041 1
(EJ296010) 1095388038354 Global-Ocean-Sampling_GS-27-01-01-1... 52 0.16 1
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 40 0.25 10
(AC003970) Arabidopsis thaliana chromosome I BAC F14J9 genom... 38 0.37 2
(DW185549) EST01819 Whole Female 1 Aedes aegypti cDNA clone ... 50 0.64 1
(DW185535) EST01805 Whole Female 1 Aedes aegypti cDNA clone ... 50 0.64 1
(DW185372) EST01642 Whole Female 1 Aedes aegypti cDNA clone ... 50 0.64 1
(DW185251) EST01521 Whole Female 1 Aedes aegypti cDNA clone ... 50 0.64 1
(DW184990) EST01260 Whole Female 1 Aedes aegypti cDNA clone ... 50 0.64 1
(DW184846) EST01116 Whole Female 1 Aedes aegypti cDNA clone ... 50 0.64 1
(DW184017) EST00287 Whole Female 1 Aedes aegypti cDNA clone ... 50 0.64 1
(DV435461) NADD187TR Aedes aegypti infected with Dengue viru... 50 0.64 1
(DV435460) NADD187TF Aedes aegypti infected with Dengue viru... 50 0.64 1
(DV403099) NADVJ45TR Aedes aegypti infected with Dengue viru... 50 0.64 1
(DV402353) NADVJ45TF Aedes aegypti infected with Dengue viru... 50 0.64 1
(DV385022) NADAJ52TR Aedes aegypti infected with Dengue viru... 50 0.64 1
(DV385020) NADAJ52TF Aedes aegypti infected with Dengue viru... 50 0.64 1
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568... 34 0.79 13
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 34 0.90 16
(CU224384) Populus EST from leave. 34 1.4 3
(EJ562043) 1092959666558 Global-Ocean-Sampling_GS-29-01-01-1... 34 1.7 2
(FI039218) CHO_OF6462xg06f1.ab1 CHO_OF6 Nicotiana tabacum ge... 36 1.7 2
(AF362374) Dictyostelium discoideum histidine kinase DhkM (d... 30 2.5 6
(AL031745) Plasmodium falciparum DNA from MAL1P2. 48 2.5 1
(CU928719) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 2.5 1
(EK529555) 1095516003381 Global-Ocean-Sampling_GS-32-01-01-1... 48 2.5 1
(CL871733) abe77f03.x1 Soybean methylation filtered genomic ... 48 2.5 1
(DW184761) EST01031 Whole Female 1 Aedes aegypti cDNA clone ... 48 2.5 1
(DC233323) Plasmodium berghei strain ANKA cDNA clone:SG02730... 48 2.5 1
(CV735243) Cri2_12_J14_SP6 Ceratopteris Spore Library Cerato... 48 2.5 1
(BB973069) Plasmodium berghei strain ANKA cDNA clone:OK00280... 48 2.5 1
(BB973058) Plasmodium berghei strain ANKA cDNA clone:OK00279... 48 2.5 1
(EH012571) USDA-FP_185458 Lysiphlebus testaceipes adult whol... 40 2.7 3
(AU269193) Dictyostelium discoideum vegetative cDNA clone:VS... 44 4.6 2
(EI770583) PM1001N06TF BAC library from the prostate metasta... 44 5.8 2
(AE014833) Plasmodium falciparum 3D7 chromosome 10 section 5... 36 6.0 11
(BJ445976) Dictyostelium discoideum cDNA clone:ddv61b07, 3' ... 44 6.3 2
(EK312246) 1095462400941 Global-Ocean-Sampling_GS-31-01-01-1... 34 6.5 2
(FH744803) CHO_OF5176xi21f1.ab1 CHO_OF5 Nicotiana tabacum ge... 36 6.6 2
(AC115588) Dictyostelium discoideum chromosome 2 map complem... 34 8.1 7
(DT742908) EST1176757 Aquilegia cDNA library Aquilegia formo... 36 8.1 2
(EJ204498) 1092344328521 Global-Ocean-Sampling_GS-27-01-01-1... 42 8.3 2
(EJ159725) 1092344043347 Global-Ocean-Sampling_GS-27-01-01-1... 46 8.9 2
(DT733615) EST1167465 Aquilegia cDNA library Aquilegia formo... 36 9.3 2

>(BJ419674) Dictyostelium discoideum cDNA clone:ddv36h20, 5' end,
single read.
Length = 527

Score = 1035 bits (522), Expect = 0.0
Identities = 522/522 (100%)
Strand = Plus / Plus


Query: 14 aagaagtgaattacaaaaattaaaatttgaattaattaccttgatcaatcaaaaatcaga 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagaagtgaattacaaaaattaaaatttgaattaattaccttgatcaatcaaaaatcaga 60


Query: 74 ttcaatttataatgaacaaaaagaatatcaaaaacaagaacgtcttttaagagaagatga 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcaatttataatgaacaaaaagaatatcaaaaacaagaacgtcttttaagagaagatga 120


Query: 134 tagaaaatatatagaaactttaaagatttcaattttctcatcattaaaagaggcaaagat 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagaaaatatatagaaactttaaagatttcaattttctcatcattaaaagaggcaaagat 180


Query: 194 tgaaagagatcaattatccaatcaaatcaattcattattacaagataataaaaccattca 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgaaagagatcaattatccaatcaaatcaattcattattacaagataataaaaccattca 240


Query: 254 aatcaatgctgaacaagctgaacaattggcaagcacaaagaatgatcaactattgaaagc 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatcaatgctgaacaagctgaacaattggcaagcacaaagaatgatcaactattgaaagc 300


Query: 314 aaatgatgaattgttggcacaattggaacaatctagaaaacaacgtttatttgaaattca 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaatgatgaattgttggcacaattggaacaatctagaaaacaacgtttatttgaaattca 360


Query: 374 agaatcagagaatagattcaaacaagatagagaacaattaatcaatgatcataaacaaca 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agaatcagagaatagattcaaacaagatagagaacaattaatcaatgatcataaacaaca 420


Query: 434 agagaaattagaacaacaaaagagagatctcgaagagactagaatcattgaacaattgaa 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agagaaattagaacaacaaaagagagatctcgaagagactagaatcattgaacaattgaa 480


Query: 494 acaagagtcggaacaacgtaaaaaacaatatgaagatcattt 535
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acaagagtcggaacaacgtaaaaaacaatatgaagatcattt 522

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 2,861,484,337
Number of extensions: 182073239
Number of successful extensions: 15297006
Number of sequences better than 10.0: 79
Length of query: 3886
Length of database: 95,242,211,685
Length adjustment: 25
Effective length of query: 3861
Effective length of database: 97,216,030,006
Effective search space: 375351091853166
Effective search space used: 375351091853166
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7. 2
Homology vs Protein
Query= Contig-U12300-1 (Contig-U12300-1Q) /CSM_Contig/Contig-U12300-1Q.Seq.d
(3886 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

BC084208_1(BC084208|pid:none) Xenopus laevis hypothetical LOC495... 70 6e-10
BC088558_1(BC088558|pid:none) Xenopus tropicalis hypothetical LO... 70 8e-10
BC121434_1(BC121434|pid:none) Xenopus tropicalis epithelial prot... 69 1e-09
EF119718_1(EF119718|pid:none) Homo sapiens xeplin variant 2 (CMY... 69 1e-09
BC172832_1(BC172832|pid:none) Synthetic construct Mus musculus c... 69 1e-09
AK122889_1(AK122889|pid:none) Homo sapiens cDNA FLJ16539 fis, cl... 69 1e-09
AB097518_1(AB097518|pid:none) Macaca fascicularis brain cDNA clo... 68 3e-09
AJ721104_1(AJ721104|pid:none) Gallus gallus mRNA for hypothetica... 67 4e-09
BC001247_1(BC001247|pid:none) Homo sapiens LIM domain and actin ... 67 7e-09
AK000372_1(AK000372|pid:none) Homo sapiens cDNA FLJ20365 fis, cl... 66 9e-09
AK096172_1(AK096172|pid:none) Homo sapiens cDNA FLJ38853 fis, cl... 66 9e-09
AK031698_1(AK031698|pid:none) Mus musculus 13 days embryo male t... 65 1e-08
AK049350_1(AK049350|pid:none) Mus musculus ES cells cDNA, RIKEN ... 65 1e-08
AF307845_1(AF307845|pid:none) Mus musculus epithelial protein lo... 65 1e-08
(Q8BGB5) RecName: Full=LIM domain-containing protein 2; &AK0125... 65 1e-08
BC031490_1(BC031490|pid:none) Mus musculus LIM domain and actin ... 65 1e-08
(Q9ERG0) RecName: Full=LIM domain and actin-binding protein 1; A... 65 1e-08
(Q4KM31) RecName: Full=LIM domain-containing protein 2; &BC0988... 65 1e-08
AY042084_3(AY042084|pid:none) Plasmodium falciparum erythrocyte ... 65 2e-08
AF198455_1(AF198455|pid:none) Homo sapiens epithelial protein lo... 65 2e-08
AB489164_1(AB489164|pid:none) Synthetic construct DNA, clone: pF... 65 2e-08
AC116922_4(AC116922|pid:none) Dictyostelium discoideum chromosom... 65 2e-08
DQ364062_1(DQ364062|pid:none) Sus scrofa EPLIN-b mRNA, complete ... 65 2e-08
DQ364063_1(DQ364063|pid:none) Sus scrofa EPLIN-a mRNA, complete ... 65 2e-08
BC135680_1(BC135680|pid:none) Xenopus tropicalis epithelial prot... 65 3e-08
(Q9BT23) RecName: Full=LIM domain-containing protein 2; &AK0923... 64 3e-08
AM469183_1(AM469183|pid:none) Vitis vinifera contig VV78X221882.... 64 3e-08
EU930276_1(EU930276|pid:none) Simulium vittatum clone SV-38 hypo... 64 6e-08
CP001328_545(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 63 7e-08
AB023479_1(AB023479|pid:none) Nicotiana tabacum mRNA for transcr... 63 1e-07
AF116851_1(AF116851|pid:none) Nicotiana tabacum LIM domain prote... 63 1e-07
(P37709) RecName: Full=Trichohyalin; &CS673546_1(CS673546|pid:n... 62 1e-07
AK085065_1(AK085065|pid:none) Mus musculus 13 days embryo lung c... 62 1e-07
DQ213126_1(DQ213126|pid:none) Taeniopygia guttata clone 0058P002... 62 2e-07
BC047797_1(BC047797|pid:none) Danio rerio LIM domain and actin b... 62 2e-07
AF184886_1(AF184886|pid:none) Nicotiana tabacum LIM domain prote... 62 2e-07
EU186001_1(EU186001|pid:none) Lilium longiflorum LIM1 mRNA, comp... 62 2e-07
AM475696_4(AM475696|pid:none) Vitis vinifera contig VV78X042996.... 62 2e-07
AB079513_1(AB079513|pid:none) Nicotiana tabacum Ntlim1 mRNA for ... 62 2e-07
EU496813_1(EU496813|pid:none) Nicotiana tabacum LIM domain prote... 62 2e-07
EF035037_1(EF035037|pid:none) Populus tremula x Populus alba LIM... 62 2e-07
AF187105_1(AF187105|pid:none) Helianthus annuus LIM domain prote... 61 3e-07
EF035035_1(EF035035|pid:none) Populus tremula x Populus alba str... 61 3e-07
EF147317_1(EF147317|pid:none) Populus trichocarpa clone WS0122_J... 61 3e-07
AF116849_1(AF116849|pid:none) Helianthus annuus. 61 3e-07
EU930270_1(EU930270|pid:none) Simulium vittatum clone SV-34 hypo... 61 4e-07
AF148805_82(AF148805|pid:none) Human herpesvirus 8 type P isolat... 61 4e-07
EF035036_1(EF035036|pid:none) Populus tremula x Populus alba str... 61 4e-07
AC125482_26(AC125482|pid:none) Medicago truncatula clone mth2-15... 61 4e-07
U93872_83(U93872|pid:none) Kaposi's sarcoma-associated herpesvir... 60 5e-07
EF145390_1(EF145390|pid:none) Populus trichocarpa clone WS01124_... 60 5e-07
AF184109_1(AF184109|pid:none) Nicotiana tabacum LIM domain prote... 60 5e-07
EF035039_1(EF035039|pid:none) Populus tremula x Populus alba LIM... 60 5e-07
EF035038_1(EF035038|pid:none) Populus tremula x Populus alba LIM... 60 6e-07
AB079511_1(AB079511|pid:none) Populus kitakamiensis Pklim1 gene ... 60 6e-07
AF002109_4(AF002109|pid:none) Arabidopsis thaliana chromosome 2 ... 60 6e-07
AF305694_1(AF305694|pid:none) Kaposi's sarcoma-associated herpes... 60 8e-07
BC151676_1(BC151676|pid:none) Bos taurus trichohyalin, mRNA (cDN... 60 8e-07
AB079512_1(AB079512|pid:none) Nicotiana tabacum Ntlim1 gene for ... 60 8e-07
EU957376_1(EU957376|pid:none) Zea mays clone 1590177 pollen-spec... 60 8e-07
EF035040_1(EF035040|pid:none) Populus tremula x Populus alba LIM... 60 8e-07
AF047353_1(AF047353|pid:none) Helianthus annuus LIM domain prote... 60 8e-07
U52064_1(U52064|pid:none) Kaposi's sarcoma-associated herpes-lik... 59 1e-06
AF360120_1(AF360120|pid:none) Human herpesvirus 8 ORF73 gene, co... 59 1e-06
CP000227_4526(CP000227|pid:none) Bacillus cereus Q1, complete ge... 59 1e-06
AY166677_1(AY166677|pid:none) Plasmodium reichenowi reticulocyte... 59 1e-06
EF148212_1(EF148212|pid:none) Populus trichocarpa clone WS0128_M... 59 1e-06
AE017194_4937(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 59 1e-06
EU482903_1(EU482903|pid:none) Pinus taeda LIM2 transcription fac... 59 1e-06
AK317129_1(AK317129|pid:none) Arabidopsis thaliana AT3G55770 mRN... 59 1e-06
AF370574_1(AF370574|pid:none) Arabidopsis thaliana transcription... 59 1e-06
AF192756_1(AF192756|pid:none) Kaposi's sarcoma-associated herpes... 59 2e-06
EU962065_1(EU962065|pid:none) Zea mays clone 239982 pollen-speci... 59 2e-06
AC123899_21(AC123899|pid:none) Medicago truncatula clone mth2-33... 59 2e-06
BT055434_1(BT055434|pid:none) Zea mays full-length cDNA clone ZM... 59 2e-06
AC009273_19(AC009273|pid:none) Sequence of BAC T1N6 from Arabido... 59 2e-06
T50694(T50694) transcription factor L2 [imported] - Arabidopsis ... 59 2e-06
AK317367_1(AK317367|pid:none) Arabidopsis thaliana AT1G01780 mRN... 59 2e-06
AB290180_1(AB290180|pid:none) Homo sapiens mRNA for MYO5A varian... 58 2e-06
B59254(B59254) mysoin heavy chain 12, splice form2 - human &Y07... 58 2e-06
AB209957_1(AB209957|pid:none) Sus scrofa MYO5A mRNA for myosin V... 58 2e-06
BT036854_1(BT036854|pid:none) Zea mays full-length cDNA clone ZM... 58 2e-06
AK138935_1(AK138935|pid:none) Mus musculus adult male aorta and ... 58 2e-06
EF146377_1(EF146377|pid:none) Populus trichocarpa clone WS0117_L... 58 2e-06
(Q8BML1) RecName: Full=Protein MICAL-2; &AK030608_1(AK030608|pi... 58 2e-06
AF443117_1(AF443117|pid:none) Gossypium hirsutum LIM domain prot... 58 2e-06
(P22793) RecName: Full=Trichohyalin; &A40691(A40691;A34209;S326... 58 3e-06
X51695_1(X51695|pid:none) Ovis sp. trichohyalin mRNA, partial. 58 3e-06
A45973(A45973) trichohyalin - human &CS673550_1(CS673550|pid:no... 58 3e-06
AB170106_1(AB170106|pid:none) Macaca fascicularis brain cDNA clo... 58 3e-06
AF187103_1(AF187103|pid:none) Helianthus annuus LIM domain prote... 58 3e-06
BT039056_1(BT039056|pid:none) Zea mays full-length cDNA clone ZM... 58 3e-06
(P29675) RecName: Full=Pollen-specific protein SF3; &AF187104_1... 58 3e-06
BT053270_1(BT053270|pid:none) Medicago truncatula clone MTYFP_FQ... 57 4e-06
AK153389_1(AK153389|pid:none) Mus musculus bone marrow macrophag... 57 4e-06
CP001287_1060(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 57 5e-06
AB038364_1(AB038364|pid:none) Rattus norvegicus mRNA for SH3P7r4... 57 5e-06
AB039818_1(AB039818|pid:none) Rattus norvegicus mRNA for SH3P7r2... 57 5e-06
AC004665_22(AC004665|pid:none) Arabidopsis thaliana chromosome 2... 57 5e-06
AL929264_5(AL929264|pid:none) Zebrafish DNA sequence from clone ... 57 5e-06
(Q9JHL4) RecName: Full=Drebrin-like protein; AltName: Full=SH3 d... 57 5e-06
(Q80WP1) RecName: Full=Drebrin-like protein; AltName: Full=SH3 d... 57 5e-06
AB039819_1(AB039819|pid:none) Rattus norvegicus mRNA for SH3P7r3... 57 5e-06
(Q54G05) RecName: Full=Putative leucine-rich repeat-containing p... 57 7e-06
AF197568_1(AF197568|pid:none) Nicotiana tabacum pollen specific ... 57 7e-06
AC135208_4(AC135208|pid:none) Oryza sativa (japonica cultivar-gr... 57 7e-06
AF218020_1(AF218020|pid:none) Homo sapiens PP5423 mRNA, complete... 57 7e-06
AE014188_70(AE014188|pid:none) Plasmodium falciparum 3D7 chromos... 56 9e-06
U55369_5(U55369|pid:none) Caenorhabditis elegans cosmid C18C4, c... 56 9e-06
CT033761_1(CT033761|pid:none) Mouse DNA sequence from clone RP23... 56 9e-06
U55369_4(U55369|pid:none) Caenorhabditis elegans cosmid C18C4, c... 56 9e-06
(A6H7G2) RecName: Full=Drebrin-like protein; &BC146234_1(BC1462... 56 9e-06
CR457167_1(CR457167|pid:none) Homo sapiens full open reading fra... 56 9e-06
BC011677_1(BC011677|pid:none) Homo sapiens drebrin-like, mRNA (c... 56 9e-06
(Q9UJU6) RecName: Full=Drebrin-like protein; AltName: Full=Drebr... 56 9e-06
AK319026_1(AK319026|pid:none) Arabidopsis thaliana AT3G55770 mRN... 56 9e-06
CR536604_8(CR536604|pid:none) Zebrafish DNA sequence from clone ... 56 1e-05
CT005266_229(CT005266|pid:none) Leishmania major strain Friedlin... 56 1e-05
AC155889_12(AC155889|pid:none) Medicago truncatula chromosome 2 ... 56 1e-05
(Q54VY3) RecName: Full=Putative uncharacterized protein DDB_G028... 56 1e-05
Z75531_10(Z75531|pid:none) Caenorhabditis elegans Cosmid C54D10,... 56 1e-05
T20218(T20218)hypothetical protein C54D10.7 - Caenorhabditis ele... 56 1e-05
EU966603_1(EU966603|pid:none) Zea mays clone 295565 unknown mRNA. 56 1e-05
BC095818_1(BC095818|pid:none) Danio rerio zgc:112450, mRNA (cDNA... 56 1e-05
AB493659_1(AB493659|pid:none) Arabidopsis thaliana At3g61230 mRN... 56 1e-05
AL137898_13(AL137898|pid:none) Arabidopsis thaliana DNA chromoso... 56 1e-05
AC160095_6(AC160095|pid:none) Solanum lycopersicum clone BB, com... 56 1e-05
BC091989_1(BC091989|pid:none) Danio rerio similar to GTPase, IMA... 55 2e-05
AF112359_1(AF112359|pid:none) Schmidtea mediterranea clone M11 m... 55 2e-05
(Q54KW6) RecName: Full=Putative uncharacterized protein DDB_G028... 55 2e-05
BC090651_1(BC090651|pid:none) Mus musculus microtubule associate... 55 2e-05
AB384532_1(AB384532|pid:none) Synthetic construct DNA, clone: pF... 55 2e-05
BT061506_1(BT061506|pid:none) Zea mays full-length cDNA clone ZM... 55 2e-05
AB463198_1(AB463198|pid:none) Synthetic construct DNA, clone: pF... 55 2e-05
AK168898_1(AK168898|pid:none) Mus musculus 16 days embryo kidney... 55 2e-05
AF049917_1(AF049917|pid:none) Petunia x hybrida PGPS/D1 (PGPS/D1... 55 2e-05
(Q7RTP6) RecName: Full=Protein MICAL-3; 55 2e-05
BC085009_1(BC085009|pid:none) Homo sapiens microtubule associate... 55 2e-05
AK132669_1(AK132669|pid:none) Mus musculus adult male testis cDN... 55 2e-05
BC157876_1(BC157876|pid:none) Homo sapiens microtubule associate... 55 2e-05
BT068434_1(BT068434|pid:none) Zea mays full-length cDNA clone ZM... 55 2e-05
EF082885_1(EF082885|pid:none) Picea sitchensis clone WS02728_E15... 55 2e-05
BC138257_1(BC138257|pid:none) Mus musculus microtubule associate... 55 2e-05
(Q5U236) RecName: Full=PERQ amino acid-rich with GYF domain-cont... 55 2e-05
(Q9WVQ0) RecName: Full=Polyamine-modulated factor 1-binding prot... 55 2e-05
AC116957_105(AC116957|pid:none) Dictyostelium discoideum chromos... 55 2e-05
AB110786_1(AB110786|pid:none) Homo sapiens MICAL2PV2 mRNA for fl... 55 2e-05
BX538021_1(BX538021|pid:none) Homo sapiens mRNA; cDNA DKFZp686H2... 55 2e-05
BX641163_1(BX641163|pid:none) Homo sapiens mRNA; cDNA DKFZp686H0... 55 2e-05
(Q9VJI3) RecName: Full=Myosin heavy chain, muscle; 55 3e-05
M61229_2(M61229|pid:none) D.melanogaster myosin heavy chain gene... 55 3e-05
A32491(A32491)myosin heavy chain 1, muscle - fruit fly (Drosophi... 55 3e-05
L04159_1(L04159|pid:none) Plasmodium falciparum unknown gene. 55 3e-05
D35815(D35815)myosin heavy chain 4, muscle - fruit fly (Drosophi... 55 3e-05
(Q86KL1) RecName: Full=Probable E3 ubiquitin-protein ligase bre1... 55 3e-05
AE014134_2868(AE014134|pid:none) Drosophila melanogaster chromos... 55 3e-05
AE014134_2866(AE014134|pid:none) Drosophila melanogaster chromos... 55 3e-05
X53155_4(X53155|pid:none) Drosophila melanogaster MHC gene, exon... 55 3e-05
AE014134_2865(AE014134|pid:none) Drosophila melanogaster chromos... 55 3e-05
AL844509_110(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 55 3e-05
AE014134_2859(AE014134|pid:none) Drosophila melanogaster chromos... 55 3e-05
AE014134_2860(AE014134|pid:none) Drosophila melanogaster chromos... 55 3e-05
B35815(B35815) myosin heavy chain 2, muscle - fruit fly (Drosoph... 55 3e-05
(Q8IDX6) RecName: Full=Reticulocyte-binding protein 2 homolog a;... 55 3e-05
BT056315_1(BT056315|pid:none) Drosophila melanogaster RH59876 fu... 55 3e-05
AE014134_2857(AE014134|pid:none) Drosophila melanogaster chromos... 55 3e-05
AF282265_1(AF282265|pid:none) Homo sapiens inner centromere prot... 55 3e-05
(Q5AMN3) RecName: Full=Autophagy-related protein 11; 55 3e-05
AF312916_1(AF312916|pid:none) Plasmodium falciparum reticulocyte... 55 3e-05
AM462939_1(AM462939|pid:none) Vitis vinifera contig VV78X214253.... 55 3e-05
FN357691_4(FN357691|pid:none) Schistosoma mansoni genome sequenc... 55 3e-05
BT062488_1(BT062488|pid:none) Zea mays full-length cDNA clone ZM... 55 3e-05
FN357691_3(FN357691|pid:none) Schistosoma mansoni genome sequenc... 55 3e-05
(Q8TDY2) RecName: Full=RB1-inducible coiled-coil protein 1; 54 3e-05
D86958_1(D86958|pid:none) Homo sapiens mRNA for KIAA0203 gene, p... 54 3e-05
AB059622_1(AB059622|pid:none) Homo sapiens RBICC mRNA for Rb1-in... 54 3e-05
CR940347_652(CR940347|pid:none) Theileria annulata strain Ankara... 54 3e-05
AE017351_1(AE017351|pid:none) Cryptococcus neoformans var. neofo... 54 3e-05
BC017556_1(BC017556|pid:none) Homo sapiens RB1-inducible coiled-... 54 3e-05
EU976500_1(EU976500|pid:none) Zea mays clone 896310 unknown mRNA. 54 3e-05
BC096905_1(BC096905|pid:none) Danio rerio similar to Epithelial ... 54 3e-05
AC115598_3(AC115598|pid:none) Dictyostelium discoideum chromosom... 54 4e-05
(Q99104) RecName: Full=Myosin-Va; AltName: Full=Dilute myosin he... 54 4e-05
AE014188_63(AE014188|pid:none) Plasmodium falciparum 3D7 chromos... 54 4e-05
AP008971_958(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 54 6e-05
CR382138_850(CR382138|pid:none) Debaryomyces hansenii strain CBS... 54 6e-05
(Q09863) RecName: Full=Stress response protein nst1; &AL136538_... 54 6e-05
(P54697) RecName: Full=Myosin-J heavy chain; AltName: Full=Myosi... 54 6e-05
T18278(T18278;T30579) myosin heavy chain [similarity] - slime mo... 54 6e-05
(O33600) RecName: Full=DNA double-strand break repair rad50 ATPa... 54 6e-05
AY398329_1(AY398329|pid:none) Danio rerio clone RK068A3C03 coact... 54 6e-05
BX649444_1(BX649444|pid:none) Zebrafish DNA sequence from clone ... 54 6e-05
(Q7ZXQ9) RecName: Full=Drebrin-like protein A; &BC044296_1(BC04... 54 6e-05
AJ851697_1(AJ851697|pid:none) Gallus gallus mRNA for hypothetica... 54 6e-05
AK220353_1(AK220353|pid:none) Mus musculus mRNA for mKIAA0750 pr... 54 6e-05
A57013(A57013;S44243) early endosome antigen 1 - human &L40157_... 53 8e-05
AE000657_451(AE000657|pid:none) Aquifex aeolicus VF5, complete g... 53 8e-05
AE014186_199(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 53 8e-05
(A2VD00) RecName: Full=Eukaryotic translation initiation factor ... 53 8e-05
BC091872_1(BC091872|pid:none) Danio rerio novel protein similar ... 53 8e-05
AB207974_1(AB207974|pid:none) Oryzias latipes SYCP1 mRNA for syn... 53 8e-05
(A5DXA0) RecName: Full=Stress response protein NST1; 53 8e-05
FN357583_5(FN357583|pid:none) Schistosoma mansoni genome sequenc... 53 8e-05
DQ386455_1(DQ386455|pid:none) Homo sapiens intersectin 1 short f... 53 1e-04
AF114488_1(AF114488|pid:none) Homo sapiens intersectin short iso... 53 1e-04
AE017342_35(AE017342|pid:none) Cryptococcus neoformans var. neof... 53 1e-04
CR385063_3(CR385063|pid:none) Zebrafish DNA sequence from clone ... 53 1e-04
(A6NEF3) RecName: Full=Putative golgin subfamily A member 6-like... 53 1e-04
EU152331_1(EU152331|pid:none) Homo sapiens intersectin 1 short f... 53 1e-04
AF064243_1(AF064243|pid:none) Homo sapiens intersectin short for... 53 1e-04
EU120734_1(EU120734|pid:none) Homo sapiens intersectin 1 long fo... 53 1e-04
AB463085_1(AB463085|pid:none) Synthetic construct DNA, clone: pF... 53 1e-04
(Q9NQS7) RecName: Full=Inner centromere protein; 53 1e-04
EU120735_1(EU120735|pid:none) Homo sapiens intersectin 1 short f... 53 1e-04
EU117382_1(EU117382|pid:none) Homo sapiens intersectin 1 long fo... 53 1e-04
EU120733_1(EU120733|pid:none) Homo sapiens intersectin 1 long fo... 53 1e-04
(Q15075) RecName: Full=Early endosome antigen 1; AltName: Full=E... 53 1e-04
DQ340865_1(DQ340865|pid:none) Homo sapiens intersectin 1 short f... 53 1e-04
AF064244_1(AF064244|pid:none) Homo sapiens intersectin long form... 53 1e-04
AB023226_1(AB023226|pid:none) Homo sapiens mRNA for KIAA1009 pro... 53 1e-04
(Q15811) RecName: Full=Intersectin-1; AltName: Full=SH3 domain-c... 53 1e-04
EU140800_1(EU140800|pid:none) Homo sapiens intersectin 1 short f... 53 1e-04
AK023613_1(AK023613|pid:none) Homo sapiens cDNA FLJ13551 fis, cl... 53 1e-04
DQ679754_1(DQ679754|pid:none) Homo sapiens intersectin 1 short f... 53 1e-04
(Q5TB80) RecName: Full=Protein QN1 homolog; &AL138742_1(AL13874... 53 1e-04
FN314698_1(FN314698|pid:none) Schistosoma japonicum isolate Anhu... 53 1e-04
AK303313_1(AK303313|pid:none) Homo sapiens cDNA FLJ52379 complet... 52 1e-04
AE014185_353(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 52 1e-04
AK056195_1(AK056195|pid:none) Homo sapiens cDNA FLJ31633 fis, cl... 52 1e-04
BC094404_1(BC094404|pid:none) Xenopus laevis hypothetical protei... 52 1e-04
AY618702_1(AY618702|pid:none) Danio rerio myosin VIa (myo6a) mRN... 52 1e-04
AE014298_1216(AE014298|pid:none) Drosophila melanogaster chromos... 52 1e-04
CP000478_1294(CP000478|pid:none) Syntrophobacter fumaroxidans MP... 52 1e-04
AY138499_1(AY138499|pid:none) Plasmodium falciparum normocyte bi... 52 1e-04
(Q6GM14) RecName: Full=Drebrin-like protein B; &BC074277_1(BC07... 52 1e-04
(O76329) RecName: Full=Interaptin; AltName: Full=Alpha-actinin B... 52 2e-04
BC077134_1(BC077134|pid:none) Danio rerio TATA element modulator... 52 2e-04
BC097506_1(BC097506|pid:none) Xenopus laevis XL-INCENP protein, ... 52 2e-04
AM910986_171(AM910986|pid:none) Plasmodium knowlesi strain H chr... 52 2e-04
CP000084_1312(CP000084|pid:none) Candidatus Pelagibacter ubique ... 52 2e-04
(O04096) RecName: Full=F-box protein At1g10890; &F86242(F86242)... 52 2e-04
AL021684_11(AL021684|pid:none) Arabidopsis thaliana DNA chromoso... 52 2e-04
CP001146_1446(CP001146|pid:none) Dictyoglomus thermophilum H-6-1... 52 2e-04
AB080297_1(AB080297|pid:none) Marsupenaeus japonicus cArp-1 mRNA... 52 2e-04
A28742_1(A28742|pid:none) cDNA for LSA gene 5' (partial). &Z303... 52 2e-04
FJ406820_1(FJ406820|pid:none) Plasmodium falciparum isolate FCC2... 52 2e-04
FN357398_20(FN357398|pid:none) Schistosoma mansoni genome sequen... 52 2e-04
(A4II09) RecName: Full=Eukaryotic translation initiation factor ... 52 2e-04
(A7X169) RecName: Full=MutS2 protein; &(P65495) RecName: Fu &(P... 52 2e-04
(Q15643) RecName: Full=Thyroid receptor-interacting protein 11; ... 52 2e-04
(Q2YXD1) RecName: Full=MutS2 protein; &AJ938182_1008(AJ938182|p... 52 2e-04
AF213645_1(AF213645|pid:none) Plasmodium falciparum p101/acidic ... 52 2e-04
BX641024_1(BX641024|pid:none) Homo sapiens mRNA; cDNA DKFZp686C0... 52 2e-04
(A5IS30) RecName: Full=MutS2 protein; &(A6U0W1) RecName: Fu &CP... 52 2e-04
AM910995_58(AM910995|pid:none) Plasmodium knowlesi strain H chro... 52 2e-04
A47297(A47297;A55441) myosin heavy chain form B, nonmuscle - Afr... 52 2e-04
AK302893_1(AK302893|pid:none) Homo sapiens cDNA FLJ58714 complet... 52 2e-04
AK302580_1(AK302580|pid:none) Homo sapiens cDNA FLJ58307 complet... 52 2e-04
AB110785_1(AB110785|pid:none) Homo sapiens MICAL2PV1 mRNA for fl... 52 2e-04
AB018293_1(AB018293|pid:none) Homo sapiens mRNA for KIAA0750 pro... 52 2e-04
AK294845_1(AK294845|pid:none) Homo sapiens cDNA FLJ61246 complet... 52 2e-04
(O94851) RecName: Full=Protein MICAL-2; &AB385380_1(AB385380|pi... 52 2e-04
BC073402_1(BC073402|pid:none) Xenopus laevis MGC80860 protein, m... 52 2e-04
Z96798_1(Z96798|pid:none) Bos taurus mRNA for caldesmon. 51 3e-04
AB385322_1(AB385322|pid:none) Synthetic construct DNA, clone: pF... 51 3e-04
AL109897_2(AL109897|pid:none) Human DNA sequence from clone RP1-... 51 3e-04
AK092490_1(AK092490|pid:none) Homo sapiens cDNA FLJ35171 fis, cl... 51 3e-04
AM470431_2(AM470431|pid:none) Vitis vinifera contig VV79X000790.... 51 3e-04
AK302092_1(AK302092|pid:none) Homo sapiens cDNA FLJ61456 complet... 51 3e-04
(Q9UM54) RecName: Full=Myosin-VI; AltName: Full=Unconventional m... 51 3e-04
(Q32N93) RecName: Full=Inner centromere protein B; &BC108767_1(... 51 3e-04
AF132672_1(AF132672|pid:none) Rattus norvegicus EH-domain/SH3-do... 51 3e-04
(Q96EA4) RecName: Full=Coiled-coil domain-containing protein 99;... 51 3e-04
AB264661_1(AB264661|pid:none) Papilio xuthus mRNA for muscle myo... 51 3e-04
(Q8IIG7) RecName: Full=Uncharacterized protein PF11_0207; &AE01... 51 3e-04
CU138540_1(CU138540|pid:none) Zebrafish DNA sequence from clone ... 51 3e-04
(Q86AF2) RecName: Full=Putative uncharacterized protein DDB_G027... 51 3e-04
AE014134_2199(AE014134|pid:none) Drosophila melanogaster chromos... 51 3e-04
AY154474_1(AY154474|pid:none) Bos taurus l-caldesmon mRNA, compl... 51 3e-04
AB002387_1(AB002387|pid:none) Homo sapiens mRNA for KIAA0389 gen... 51 3e-04
AL929518_1(AL929518|pid:none) Zebrafish DNA sequence from clone ... 51 3e-04
A45592(S24597;A45592;S29393;S34842;B45592;C45592;D45592) liver s... 51 3e-04
EU930308_1(EU930308|pid:none) Simulium vittatum clone SV-75 hypo... 51 3e-04
DQ119137_1(DQ119137|pid:none) Aplysia californica nonmuscle myos... 51 3e-04
(Q9WVE9) RecName: Full=Intersectin-1; AltName: Full=EH domain an... 51 3e-04
AF229111_1(AF229111|pid:none) Homo sapiens myosin VI (MYO6) gene... 51 3e-04
EF568108_62(EF568108|pid:none) Glossina pallidipes salivary glan... 51 4e-04
AP006628_380(AP006628|pid:none) Onion yellows phytoplasma OY-M D... 51 4e-04
(Q9ZEH5) RecName: Full=MutS2 protein; Flags: Fragment; &AJ22348... 51 4e-04
AY040821_1(AY040821|pid:none) Loligo pealei non-muscle myosin II... 51 4e-04
(Q4R7H3) RecName: Full=Coiled-coil domain-containing protein 99;... 51 4e-04
CP001130_480(CP001130|pid:none) Hydrogenobaculum sp. Y04AAS1, co... 51 4e-04
(Q6GHU1) RecName: Full=MutS2 protein; &BX571856_1092(BX571856|p... 51 4e-04
Y18453_1(Y18453|pid:none) Drosophila melanogaster dcy gene, exon... 51 4e-04
(P53352) RecName: Full=Inner centromere protein; &I50591(I50591... 51 4e-04
CP001213_315(CP001213|pid:none) Bifidobacterium animalis subsp. ... 51 4e-04
AM422018_203(AM422018|pid:none) Candidatus Phytoplasma australie... 51 4e-04
FN392321_833(FN392321|pid:none) Pichia pastoris GS115 chromosome... 51 4e-04
BX649294_1(BX649294|pid:none) Zebrafish DNA sequence from clone ... 51 4e-04
CP001291_4282(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 51 4e-04
AM422018_798(AM422018|pid:none) Candidatus Phytoplasma australie... 51 4e-04
AE017340_1691(AE017340|pid:none) Idiomarina loihiensis L2TR, com... 51 4e-04
FN314699_1(FN314699|pid:none) Schistosoma japonicum isolate Anhu... 51 4e-04
(Q6BUT3) RecName: Full=Stress response protein NST1; &CR382135_... 50 5e-04
AJ720514_1(AJ720514|pid:none) Gallus gallus partial mRNA for hyp... 50 5e-04
AY190946_6(AY190946|pid:none) Drosophila pseudoobscura clone DPS... 50 5e-04
BC044408_1(BC044408|pid:none) Danio rerio structural maintenance... 50 5e-04
(Q0CUP6) RecName: Full=Eukaryotic translation initiation factor ... 50 5e-04
(Q8N824) RecName: Full=Putative golgin subfamily A member 6-like... 50 5e-04
BC088666_1(BC088666|pid:none) Xenopus laevis hypothetical LOC496... 50 5e-04
BC165249_1(BC165249|pid:none) Danio rerio structural maintenance... 50 5e-04
(Q55GF9) RecName: Full=Inner centromere protein A; AltName: Full... 50 5e-04
AC114265_7(AC114265|pid:none) Dictyostelium discoideum chromosom... 50 5e-04
BC144917_1(BC144917|pid:none) Mus musculus myosin VI, mRNA (cDNA... 50 5e-04
AK172941_1(AK172941|pid:none) Mus musculus mRNA for mKIAA0389 pr... 50 5e-04
BT068142_1(BT068142|pid:none) Zea mays full-length cDNA clone ZM... 50 5e-04
FN357667_8(FN357667|pid:none) Schistosoma mansoni genome sequenc... 50 6e-04
AJ252286_1(AJ252286|pid:none) Plasmodium reichenowi partial msp3... 50 6e-04
CP000510_2651(CP000510|pid:none) Psychromonas ingrahamii 37, com... 50 6e-04
EU073749_1(EU073749|pid:none) Macaca mulatta myosin VI (MYO6) mR... 50 6e-04
FN357667_11(FN357667|pid:none) Schistosoma mansoni genome sequen... 50 6e-04
FN357667_12(FN357667|pid:none) Schistosoma mansoni genome sequen... 50 6e-04
FN357667_9(FN357667|pid:none) Schistosoma mansoni genome sequenc... 50 6e-04
BC156473_1(BC156473|pid:none) Synthetic construct Mus musculus c... 50 6e-04
X65591_1(X65591|pid:none) S.mansoni mRNA for myosin II heavy cha... 50 6e-04
S33068(S33068)myosin heavy chain - fluke (Schistosoma mansoni) (... 50 6e-04
AF132478_1(AF132478|pid:none) Mus musculus Ese1 protein mRNA, co... 50 6e-04
(Q9Z0R4) RecName: Full=Intersectin-1; AltName: Full=EH and SH3 d... 50 6e-04
CR555306_1929(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 50 6e-04
(A3LYI0) RecName: Full=Stress response protein NST1; &CP000500_... 50 6e-04
FN357667_10(FN357667|pid:none) Schistosoma mansoni genome sequen... 50 6e-04
BT021808_1(BT021808|pid:none) Bos taurus hypothetical protein MG... 50 6e-04
CP000312_1054(CP000312|pid:none) Clostridium perfringens SM101, ... 50 8e-04
(Q14789) RecName: Full=Golgin subfamily B member 1; AltName: Ful... 50 8e-04
FJ406810_1(FJ406810|pid:none) Plasmodium falciparum isolate W2me... 50 8e-04
BX890560_1(BX890560|pid:none) Zebrafish DNA sequence from clone ... 50 8e-04
AC116920_30(AC116920|pid:none) Dictyostelium discoideum chromoso... 50 8e-04
AB020673_1(AB020673|pid:none) Homo sapiens mRNA for KIAA0866 pro... 50 8e-04
D10667_1(D10667|pid:none) Homo sapiens mRNA for smooth muscle my... 50 8e-04
AM999887_1158(AM999887|pid:none) Wolbachia endosymbiont of Culex... 50 8e-04
AY722933_5(AY722933|pid:none) Borrelia garinii PBi variable plas... 50 8e-04
AY520816_1(AY520816|pid:none) Homo sapiens smooth muscle myosin ... 50 8e-04
(Q5B3C8) RecName: Full=Stress response protein nst1; 50 8e-04
AF001548_1(AF001548|pid:none) Human Chromosome 16 BAC clone CIT9... 50 8e-04
AB371588_1(AB371588|pid:none) Homo sapiens GOLGB1 mRNA for golgi... 50 8e-04
(P35749) RecName: Full=Myosin-11; AltName: Full=Myosin heavy cha... 50 8e-04
AY520817_1(AY520817|pid:none) Homo sapiens smooth muscle myosin ... 50 8e-04
D25542_1(D25542|pid:none) Homo sapiens mRNA for golgi antigen gc... 50 8e-04
CP000790_418(CP000790|pid:none) Vibrio harveyi ATCC BAA-1116 chr... 50 8e-04
(Q92878) RecName: Full=DNA repair protein RAD50; Short=... 50 8e-04
A56539(A56539;S37536) giantin - human &X75304_1(X75304|pid:none) 50 8e-04
BT082241_1(BT082241|pid:none) Anoplopoma fimbria clone afim-evh-... 50 8e-04
BC074079_1(BC074079|pid:none) Danio rerio zgc:91835, mRNA (cDNA ... 50 8e-04
AX887832_1(AX887832|pid:none) Sequence 3695 from Patent EP1033401. 50 8e-04
AK220172_1(AK220172|pid:none) Mus musculus mRNA for mKIAA4046 pr... 49 0.001
CR548612_177(CR548612|pid:none) Paramecium tetraurelia macronucl... 49 0.001
AF302465_2(AF302465|pid:none) Pasteurella multocida P934 region ... 49 0.001
AB289560_1(AB289560|pid:none) Mizuhopecten yessoensis mRNA for n... 49 0.001
AY138501_1(AY138501|pid:none) Plasmodium falciparum normocyte bi... 49 0.001
U93121_1(U93121|pid:none) Homo sapiens M-phase phosphoprotein-1 ... 49 0.001
AB033337_1(AB033337|pid:none) Homo sapiens KRMP1 mRNA for mitoti... 49 0.001
BC066670_1(BC066670|pid:none) Danio rerio eukaryotic translation... 49 0.001
D42167_1(D42167|pid:none) Ciona intestinalis mRNA for myoplasmin... 49 0.001
CP000123_803(CP000123|pid:none) Mycoplasma capricolum subsp. cap... 49 0.001
(Q9H3R8) RecName: Full=M-phase phosphoprotein 1; Short=... 49 0.001
AL117496_1(AL117496|pid:none) Homo sapiens mRNA; cDNA DKFZp434B0... 49 0.001
AJ421449_1(AJ421449|pid:none) Sus scrofa partial IVL gene for in... 49 0.001
AF312917_1(AF312917|pid:none) Plasmodium falciparum reticulocyte... 49 0.001
(Q6CTC3) RecName: Full=Stress response protein NST1; &CR382123_... 49 0.001
AM910991_288(AM910991|pid:none) Plasmodium knowlesi strain H chr... 49 0.001
AK302306_1(AK302306|pid:none) Homo sapiens cDNA FLJ59579 complet... 49 0.001
BC166177_1(BC166177|pid:none) Xenopus tropicalis hypothetical pr... 49 0.001
A86963_1(A86963|pid:none) Sequence 54 from Patent WO9838306. 49 0.001
CP001287_1414(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 49 0.001
CP000393_2580(CP000393|pid:none) Trichodesmium erythraeum IMS101... 49 0.001
FJ406823_1(FJ406823|pid:none) Plasmodium falciparum isolate D6 m... 49 0.001
BT082231_1(BT082231|pid:none) Anoplopoma fimbria clone afim-evh-... 49 0.001
BC083298_1(BC083298|pid:none) Danio rerio zgc:101840, mRNA (cDNA... 49 0.001
DQ443285_1(DQ443285|pid:none) Bombyx mori cyclic AMP-regulated p... 47 0.001
AY902464_1(AY902464|pid:none) Xenopus laevis TPR (TPR) mRNA, par... 49 0.001
AB093216_1(AB093216|pid:none) Mus musculus mRNA for mKIAA0203 pr... 49 0.001
FJ406813_1(FJ406813|pid:none) Plasmodium falciparum isolate T9/9... 49 0.001
BC150774_1(BC150774|pid:none) Mus musculus RB1-inducible coiled-... 49 0.001
AL844504_46(AL844504|pid:none) Plasmodium falciparum 3D7 chromos... 49 0.001
(Q9ESK9) RecName: Full=RB1-inducible coiled-coil protein 1; AltN... 49 0.001
FM204883_2083(FM204883|pid:none) Streptococcus equi subsp. equi ... 49 0.001
AK024959_1(AK024959|pid:none) Homo sapiens cDNA: FLJ21306 fis, c... 49 0.001
S19188(S19188;A44359;B44359;S29249) myosin-V - chicken &Z11718_... 49 0.001
BX538186_1(BX538186|pid:none) Homo sapiens mRNA; cDNA DKFZp686A2... 49 0.001
AE016818_391(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 49 0.001
AK127744_1(AK127744|pid:none) Homo sapiens cDNA FLJ45844 fis, cl... 49 0.001
AF241823_1(AF241823|pid:none) Dictyostelium discoideum prespore ... 49 0.001
CP000675_2650(CP000675|pid:none) Legionella pneumophila str. Cor... 49 0.001
AB058704_1(AB058704|pid:none) Homo sapiens mRNA for KIAA1801 pro... 49 0.001
AY445042_1(AY445042|pid:none) Streptococcus pyogenes SpyM6 mefA ... 49 0.001
AK091682_1(AK091682|pid:none) Homo sapiens cDNA FLJ34363 fis, cl... 49 0.001
EU832813_1(EU832813|pid:none) Synthetic construct Homo sapiens c... 49 0.001
A59236(A59236) embryonic muscle myosin heavy chain - sea squirt ... 49 0.001
AK022365_1(AK022365|pid:none) Homo sapiens cDNA FLJ12303 fis, cl... 49 0.001
BC060769_1(BC060769|pid:none) Homo sapiens family with sequence ... 49 0.001
(Q9TW28) RecName: Full=Myosin-M heavy chain; AltName: Full=RhoGE... 49 0.001
(Q02440) RecName: Full=Myosin-Va; AltName: Full=Dilute myosin he... 49 0.001
AM502246_231(AM502246|pid:none) Leishmania infantum chromosome 28. 49 0.001
BC081064_1(BC081064|pid:none) Xenopus laevis MGC81964 protein, m... 49 0.001
AL928674_10(AL928674|pid:none) Zebrafish DNA sequence from clone... 49 0.002
BC052414_1(BC052414|pid:none) Mus musculus inner centromere prot... 49 0.002
AL732366_1(AL732366|pid:none) Human DNA sequence from clone RP11... 49 0.002
AK127056_1(AK127056|pid:none) Homo sapiens cDNA FLJ45113 fis, cl... 49 0.002
CU928170_686(CU928170|pid:none) Kluyveromyces thermotolerans str... 49 0.002
BC089400_1(BC089400|pid:none) Homo sapiens hypothetical protein ... 49 0.002
AC116982_34(AC116982|pid:none) Dictyostelium discoideum chromoso... 49 0.002
FN357483_24(FN357483|pid:none) Schistosoma mansoni genome sequen... 49 0.002
AB100432_1(AB100432|pid:none) Mus musculus INCENP mRNA for inner... 49 0.002
FJ406817_1(FJ406817|pid:none) Plasmodium falciparum isolate K1 m... 49 0.002
CP001279_1394(CP001279|pid:none) Nautilia profundicola AmH, comp... 49 0.002
BC091835_1(BC091835|pid:none) Danio rerio im:7149072, mRNA (cDNA... 49 0.002
BC131532_1(BC131532|pid:none) Homo sapiens golgi autoantigen, go... 49 0.002
(P25386) RecName: Full=Intracellular protein transport protein U... 49 0.002
BC037165_1(BC037165|pid:none) Homo sapiens hypothetical protein ... 49 0.002
BC121746_1(BC121746|pid:none) Danio rerio similar to Apoptotic c... 49 0.002
AK303019_1(AK303019|pid:none) Homo sapiens cDNA FLJ57681 complet... 49 0.002
(O74424) RecName: Full=Nucleoporin nup211; AltName: Full=Nuclear... 49 0.002
FJ406812_1(FJ406812|pid:none) Plasmodium falciparum isolate T9/9... 49 0.002
X54378_1(X54378|pid:none) S.cerevisiae gene for Uso1 protein, in... 49 0.002
BC115074_1(BC115074|pid:none) Danio rerio apoptotic chromatin co... 49 0.002
L03188_1(L03188|pid:none) Saccharomyces cerevisiae integrin anal... 49 0.002
BC070984_1(BC070984|pid:none) Xenopus laevis hypothetical protei... 49 0.002
AF039187_1(AF039187|pid:none) Schistosoma japonicum myosin mRNA,... 49 0.002
AM910996_691(AM910996|pid:none) Plasmodium knowlesi strain H chr... 49 0.002
AB280018_1(AB280018|pid:none) Molgula tectiformis Mt-MHC2 mRNA f... 49 0.002
AK005953_1(AK005953|pid:none) Mus musculus adult male testis cDN... 49 0.002
AF041382_1(AF041382|pid:none) Drosophila melanogaster microtubul... 49 0.002
AM422018_48(AM422018|pid:none) Candidatus Phytoplasma australien... 49 0.002
BC151868_1(BC151868|pid:none) Danio rerio similar to Apoptotic c... 49 0.002
FM992695_278(FM992695|pid:none) Candida dubliniensis CD36 chromo... 49 0.002
AF520715_1(AF520715|pid:none) Drosophila melanogaster MICAL long... 49 0.002
AE001362_157(AE001362|pid:none) Plasmodium falciparum 3D7 chromo... 48 0.002
(A8MZA4) RecName: Full=Putative golgin subfamily A member 6-like... 48 0.002
(O61308) RecName: Full=227 kDa spindle- and centromere-associate... 48 0.002
(Q8I5D2) RecName: Full=101 kDa malaria antigen; AltName: Full=p1... 48 0.002
AY842303_1(AY842303|pid:none) Macrobrachium rosenbergii clock mR... 48 0.002
AX460942_1(AX460942|pid:none) Sequence 3 from Patent WO0229408. 48 0.002
AY051941_1(AY051941|pid:none) Drosophila melanogaster LD41932 fu... 48 0.002
FJ406824_1(FJ406824|pid:none) Plasmodium falciparum isolate CAMP... 48 0.002
Z75311_1(Z75311|pid:none) H.sapiens mRNA for RAD50. 48 0.002
CP001229_1223(CP001229|pid:none) Sulfurihydrogenibium azorense A... 48 0.002
AF326566_1(AF326566|pid:none) Streptococcus pyogenes M18 protein... 48 0.002
CP000806_3151(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 48 0.002
E71606(E71606)hypothetical protein PFB0765w - malaria parasite (... 48 0.002
BT011136_1(BT011136|pid:none) Drosophila melanogaster GM09007 fu... 48 0.002
(Q64331) RecName: Full=Myosin-VI; &A59299(A59299) &U49739_1(U49... 48 0.002
AY081318_1(AY081318|pid:none) Arabidopsis thaliana unknown prote... 48 0.002
BC072844_1(BC072844|pid:none) Xenopus laevis hypothetical protei... 48 0.002
(Q0CP15) RecName: Full=Stress response protein nst1; 48 0.002
CP000923_1678(CP000923|pid:none) Thermoanaerobacter sp. X514, co... 48 0.002
FJ406826_1(FJ406826|pid:none) Plasmodium falciparum isolate 3D7 ... 48 0.002
CP000513_337(CP000513|pid:none) Dichelobacter nodosus VCS1703A, ... 48 0.002
AB015042_1(AB015042|pid:none) Rattus norvegicus mRNA for drebrin... 48 0.002
AB051455_1(AB051455|pid:none) Homo sapiens mRNA for KIAA1668 pro... 48 0.002
AB028740_1(AB028740|pid:none) Mus musculus drba gene for drebrin... 48 0.002
AK314645_1(AK314645|pid:none) Homo sapiens cDNA, FLJ95489, highl... 48 0.002
BC139847_1(BC139847|pid:none) Rattus norvegicus drebrin 1, mRNA ... 48 0.002
BT048524_1(BT048524|pid:none) Salmo salar clone ssal-eve-547-255... 48 0.002
AY170852_1(AY170852|pid:none) Oryctolagus cuniculus drebrin 1 is... 48 0.002
AF520714_1(AF520714|pid:none) Drosophila melanogaster MICAL medi... 48 0.002
(Q9QXS6) RecName: Full=Drebrin; AltName: Full=Developmentally-re... 48 0.002
AK132060_1(AK132060|pid:none) Mus musculus 12 days embryo head c... 48 0.002
AE014297_1097(AE014297|pid:none) Drosophila melanogaster chromos... 48 0.002
(Q07266) RecName: Full=Drebrin; AltName: Full=Developmentally-re... 48 0.002
AK162697_1(AK162697|pid:none) Mus musculus adult female vagina c... 48 0.002
AY122215_1(AY122215|pid:none) Drosophila melanogaster LP08941 fu... 46 0.003
BC094100_1(BC094100|pid:none) Xenopus laevis hypothetical protei... 48 0.003
BC026142_1(BC026142|pid:none) Mus musculus myosin, heavy polypep... 48 0.003
AE014296_812(AE014296|pid:none) Drosophila melanogaster chromoso... 48 0.003
AY035224_1(AY035224|pid:none) Gallus gallus cardiac muscle facto... 48 0.003
D85924_1(D85924|pid:none) Mus musculus mRNA for myosin, complete... 48 0.003
AE014298_2261(AE014298|pid:none) Drosophila melanogaster chromos... 48 0.003
CR548612_417(CR548612|pid:none) Paramecium tetraurelia macronucl... 48 0.003
AL157389_1(AL157389|pid:none) Human DNA sequence from clone RP11... 48 0.003
AE016853_4669(AE016853|pid:none) Pseudomonas syringae pv. tomato... 48 0.003
(Q5R7F9) RecName: Full=MAP7 domain-containing protein 2; &CR860... 48 0.003
AL157389_2(AL157389|pid:none) Human DNA sequence from clone RP11... 48 0.003
(O08638) RecName: Full=Myosin-11; AltName: Full=Myosin heavy cha... 48 0.003
I50590(I50590) class I INCENP protein - chicken &Z25419_1(Z2541... 48 0.003
CP000679_1519(CP000679|pid:none) Caldicellulosiruptor saccharoly... 48 0.003
CP000382_2175(CP000382|pid:none) Clostridium novyi NT, complete ... 48 0.003
AC116957_80(AC116957|pid:none) Dictyostelium discoideum chromoso... 48 0.003
BX908810_20(BX908810|pid:none) Neurospora crassa DNA linkage gro... 48 0.003
T42637(T42637) hypothetical protein 162K - mouse &U14172_1(U141... 48 0.003
AE014296_814(AE014296|pid:none) Drosophila melanogaster chromoso... 48 0.003
AB015484_1(AB015484|pid:none) Dugesia japonica mRNA for myosin h... 48 0.003
AM494965_241(AM494965|pid:none) Leishmania braziliensis chromoso... 48 0.003
CR382399_47(CR382399|pid:none) Plasmodium falciparum chromosome ... 48 0.003
AC115680_34(AC115680|pid:none) Dictyostelium discoideum chromoso... 48 0.003
EF710649_10(EF710649|pid:none) Glyptapanteles flavicoxis clone B... 48 0.003
CP000246_1334(CP000246|pid:none) Clostridium perfringens ATCC 13... 48 0.003
AM910989_8(AM910989|pid:none) Plasmodium knowlesi strain H chrom... 48 0.003
CP000713_1285(CP000713|pid:none) Psychrobacter sp. PRwf-1, compl... 48 0.003
AE014298_2260(AE014298|pid:none) Drosophila melanogaster chromos... 48 0.003
BC077291_1(BC077291|pid:none) Xenopus laevis hypothetical protei... 48 0.003

>BC084208_1(BC084208|pid:none) Xenopus laevis hypothetical LOC495252,
mRNA (cDNA clone MGC:80375 IMAGE:5074658), complete cds.
Length = 708

Score = 70.1 bits (170), Expect = 6e-10
Identities = 45/136 (33%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Frame = +1

Query: 3223 PVSKRSATPTSDIDSTNSESESVVKSTTKKPSAGINAGGNDKPVSTG----PDR--CLSC 3384
PV R+ TSD + E + S+ P +N P S P R C SC
Sbjct: 296 PVISRN---TSDNHDKSEEIQRSDSSSEYSPQRVLNPVEASPPKSVKKFQLPAREVCFSC 352

Query: 3385 QKLVYQAEKLSADNRIFHKNCFKCSSCGCQMKLGNYASMDQIYXXXXXXXXXXXXXGNYS 3564
QK VY E+L A+N+++H +CF+CS C ++ LG +AS+ GNY
Sbjct: 353 QKTVYPMERLFANNQVYHNSCFRCSHCSTKLSLGTFASLHGTAYCKPHFNQLFKSKGNYD 412

Query: 3565 EGFGKLKPQQQFNLKK 3612
EGFG KP ++ + K
Sbjct: 413 EGFGH-KPHKELWVNK 427

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,930,353,644
Number of extensions: 47135681
Number of successful extensions: 212752
Number of sequences better than 10.0: 3997
Number of HSP's gapped: 197153
Number of HSP's successfully gapped: 5858
Length of query: 1295
Length of database: 1,051,180,864
Length adjustment: 141
Effective length of query: 1154
Effective length of database: 594,826,045
Effective search space: 686429255930
Effective search space used: 686429255930
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.20 gvh: -0.08 alm: 0.58 top: 0.53 tms: 0.00 mit: 0.28 mip: 0.00
nuc: 0.48 erl: 0.00 erm: 0.40 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

68.0 %: nuclear
20.0 %: cytoplasmic
4.0 %: cytoskeletal
4.0 %: mitochondrial
4.0 %: plasma membrane

>> prediction for Contig-U12300-1 is nuc

VS (DIR, S) 2
VH (FL, L) 17
VF (FL, S) 4
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 1
SF (FL, S) 0
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0